Metagenome Family F057753

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057753
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	74 residues
Representative Sequence	MATLLRASLLLRVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Number of Associated Samples	112
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	83.09 %
% of genes near scaffold ends (potentially truncated)	23.53 %
% of genes from short scaffolds (< 2000 bps)	78.68 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.794 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.177 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.735 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.33% β-sheet: 4.00% Coil/Unstructured: 58.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF01243	Putative_PNPOx	17.65
PF00334	NDK	10.29
PF05193	Peptidase_M16_C	6.62
PF01551	Peptidase_M23	3.68
PF00296	Bac_luciferase	2.94
PF00188	CAP	1.47
PF13175	AAA_15	1.47
PF00361	Proton_antipo_M	1.47
PF13304	AAA_21	1.47
PF04963	Sigma54_CBD	1.47
PF13531	SBP_bac_11	0.74
PF01828	Peptidase_A4	0.74
PF11842	DUF3362	0.74
PF03030	H_PPase	0.74
PF13699	DUF4157	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	10.29
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.94
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	1.47
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	1.47
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.79 %
Unclassified	root	N/A	2.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.79 %
Unclassified	root	N/A	2.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.79 %
Unclassified	root	N/A	2.21 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.97 %
Unclassified	root	N/A	2.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	88.97 %
Unclassified	root	N/A	2.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	83.82 %
Unclassified	root	N/A	2.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	83.82 %
Unclassified	root	N/A	2.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_121304146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	845	Open in IMG/M
3300001139\|JGI10220J13317_10710724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	757	Open in IMG/M
3300001431\|F14TB_106237510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300001661\|JGI12053J15887_10508453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	575	Open in IMG/M
3300004157\|Ga0062590_100026996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2832	Open in IMG/M
3300004480\|Ga0062592_100209692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1384	Open in IMG/M
3300005174\|Ga0066680_10522037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300005186\|Ga0066676_10000878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	11617	Open in IMG/M
3300005289\|Ga0065704_10505395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	664	Open in IMG/M
3300005293\|Ga0065715_10577053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	723	Open in IMG/M
3300005294\|Ga0065705_10740280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300005295\|Ga0065707_10248824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1132	Open in IMG/M
3300005295\|Ga0065707_10678170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300005330\|Ga0070690_100566955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	858	Open in IMG/M
3300005336\|Ga0070680_100012008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6720	Open in IMG/M
3300005336\|Ga0070680_100062347	All Organisms → cellular organisms → Bacteria	3053	Open in IMG/M
3300005441\|Ga0070700_100191961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1429	Open in IMG/M
3300005457\|Ga0070662_101785898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300005467\|Ga0070706_100006727	All Organisms → cellular organisms → Bacteria	10850	Open in IMG/M
3300005467\|Ga0070706_100585006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1038	Open in IMG/M
3300005467\|Ga0070706_102107159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	510	Open in IMG/M
3300005468\|Ga0070707_101009269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	797	Open in IMG/M
3300005530\|Ga0070679_100556987	Not Available	1090	Open in IMG/M
3300005545\|Ga0070695_101894231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	501	Open in IMG/M
3300005549\|Ga0070704_100392923	All Organisms → cellular organisms → Bacteria	1181	Open in IMG/M
3300005559\|Ga0066700_10106810	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300005564\|Ga0070664_100152044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2044	Open in IMG/M
3300005577\|Ga0068857_100020498	All Organisms → cellular organisms → Bacteria	5815	Open in IMG/M
3300005843\|Ga0068860_102380318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300006049\|Ga0075417_10042088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1940	Open in IMG/M
3300006049\|Ga0075417_10132677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1150	Open in IMG/M
3300006845\|Ga0075421_101427931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	760	Open in IMG/M
3300006852\|Ga0075433_10200440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1774	Open in IMG/M
3300006852\|Ga0075433_10239834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1609	Open in IMG/M
3300006853\|Ga0075420_100868966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	776	Open in IMG/M
3300006854\|Ga0075425_100221063	All Organisms → cellular organisms → Bacteria	2178	Open in IMG/M
3300006894\|Ga0079215_11410263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300007258\|Ga0099793_10674939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	521	Open in IMG/M
3300009012\|Ga0066710_100021466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7174	Open in IMG/M
3300009038\|Ga0099829_11085712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	663	Open in IMG/M
3300009089\|Ga0099828_10220793	Not Available	1694	Open in IMG/M
3300009089\|Ga0099828_10491479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1107	Open in IMG/M
3300009090\|Ga0099827_10159438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1852	Open in IMG/M
3300009147\|Ga0114129_10027494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8053	Open in IMG/M
3300009162\|Ga0075423_10006194	All Organisms → cellular organisms → Bacteria	11224	Open in IMG/M
3300009162\|Ga0075423_10177875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2233	Open in IMG/M
3300009174\|Ga0105241_10325487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1327	Open in IMG/M
3300009804\|Ga0105063_1076031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300009816\|Ga0105076_1095406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300010329\|Ga0134111_10099561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1114	Open in IMG/M
3300010333\|Ga0134080_10206572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	853	Open in IMG/M
3300010336\|Ga0134071_10013904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3295	Open in IMG/M
3300010336\|Ga0134071_10283032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300010399\|Ga0134127_12970644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300010400\|Ga0134122_12579151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	558	Open in IMG/M
3300010403\|Ga0134123_10746243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	964	Open in IMG/M
3300010403\|Ga0134123_13521581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300011270\|Ga0137391_10411891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1154	Open in IMG/M
3300011271\|Ga0137393_10781475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300012189\|Ga0137388_10008618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7064	Open in IMG/M
3300012201\|Ga0137365_11220492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300012203\|Ga0137399_10297633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1332	Open in IMG/M
3300012203\|Ga0137399_10367663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1196	Open in IMG/M
3300012203\|Ga0137399_11336449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300012204\|Ga0137374_10010938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10654	Open in IMG/M
3300012204\|Ga0137374_10132811	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300012205\|Ga0137362_10049394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3422	Open in IMG/M
3300012206\|Ga0137380_11629911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300012208\|Ga0137376_11128436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300012210\|Ga0137378_10841030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300012356\|Ga0137371_10048785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3273	Open in IMG/M
3300012360\|Ga0137375_10077021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3494	Open in IMG/M
3300012362\|Ga0137361_10424408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1221	Open in IMG/M
3300014154\|Ga0134075_10247400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300015358\|Ga0134089_10244723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	732	Open in IMG/M
3300017997\|Ga0184610_1025926	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300018027\|Ga0184605_10254443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	798	Open in IMG/M
3300018027\|Ga0184605_10284027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300018028\|Ga0184608_10054108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1588	Open in IMG/M
3300018028\|Ga0184608_10085863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1296	Open in IMG/M
3300018031\|Ga0184634_10254756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300018053\|Ga0184626_10379635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	569	Open in IMG/M
3300018054\|Ga0184621_10054173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1348	Open in IMG/M
3300018061\|Ga0184619_10389848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300018071\|Ga0184618_10124258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1034	Open in IMG/M
3300018071\|Ga0184618_10280412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300018074\|Ga0184640_10255226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	796	Open in IMG/M
3300018075\|Ga0184632_10103831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1247	Open in IMG/M
3300018076\|Ga0184609_10140509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1107	Open in IMG/M
3300018078\|Ga0184612_10343589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300018082\|Ga0184639_10526905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300018429\|Ga0190272_12758513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	541	Open in IMG/M
3300018433\|Ga0066667_10407179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1101	Open in IMG/M
3300020003\|Ga0193739_1040100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1212	Open in IMG/M
3300021080\|Ga0210382_10042091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1767	Open in IMG/M
3300021080\|Ga0210382_10354512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300021080\|Ga0210382_10456217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	566	Open in IMG/M
3300022756\|Ga0222622_10434567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	929	Open in IMG/M
3300025910\|Ga0207684_10000041	All Organisms → cellular organisms → Bacteria	262530	Open in IMG/M
3300025910\|Ga0207684_10045223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3736	Open in IMG/M
3300025910\|Ga0207684_10601208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	939	Open in IMG/M
3300025917\|Ga0207660_10113612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2041	Open in IMG/M
3300025917\|Ga0207660_10115599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2025	Open in IMG/M
3300025921\|Ga0207652_10779822	Not Available	850	Open in IMG/M
3300025922\|Ga0207646_10928094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	771	Open in IMG/M
3300025923\|Ga0207681_11615526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300025960\|Ga0207651_10229531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1506	Open in IMG/M
3300026285\|Ga0209438_1190263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300026324\|Ga0209470_1001817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	15451	Open in IMG/M
3300026334\|Ga0209377_1248349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300026342\|Ga0209057_1070244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1530	Open in IMG/M
3300026499\|Ga0257181_1060237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300027543\|Ga0209999_1064560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300027633\|Ga0208988_1104939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300027637\|Ga0209818_1153787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	647	Open in IMG/M
3300027645\|Ga0209117_1001039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10173	Open in IMG/M
3300027655\|Ga0209388_1112338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	779	Open in IMG/M
3300027665\|Ga0209983_1091872	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300027682\|Ga0209971_1157475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	560	Open in IMG/M
3300027695\|Ga0209966_1067176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300027738\|Ga0208989_10011850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2981	Open in IMG/M
3300027748\|Ga0209689_1072805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1841	Open in IMG/M
3300027873\|Ga0209814_10064370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1537	Open in IMG/M
3300027880\|Ga0209481_10017650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3130	Open in IMG/M
3300028711\|Ga0307293_10161222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	714	Open in IMG/M
3300028793\|Ga0307299_10244235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	675	Open in IMG/M
3300028811\|Ga0307292_10239385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300028819\|Ga0307296_10042335	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300028819\|Ga0307296_10130830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1352	Open in IMG/M
3300028828\|Ga0307312_11050102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539	Open in IMG/M
3300028828\|Ga0307312_11097257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300028881\|Ga0307277_10002149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7660	Open in IMG/M
3300031965\|Ga0326597_11415685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	673	Open in IMG/M
3300031965\|Ga0326597_11763199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	582	Open in IMG/M
3300034178\|Ga0364934_0160801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	851	Open in IMG/M
3300034773\|Ga0364936_028526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	961	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.62%
Host-Associated	Host-Associated	18.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.91%
Plants	Host-Associated → Plants	18.38%
Aquatic	Environmental → Aquatic	14.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.44%
Sediment	Environmental → Aquatic → Sediment	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.88%
Freshwater	Environmental → Aquatic → Freshwater	2.21%
Floodplain	Environmental → Terrestrial → Floodplain	1.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.06%
Loam	Environmental → Terrestrial → Soil → Loam	16.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.21%
Sand	Environmental → Terrestrial → Soil → Sand	1.47%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.24%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.21%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.47%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.18%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.41%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.21%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.47%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.47%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009804	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1213041462	3300000956	Soil	MATLLRASLVLRVGHGERQLVVRELRADNRVMQRINPGTPVDDIPWIEIGRYKDLEKERERLRVDGWEIEEPSRR*
JGI10220J13317_107107241	3300001139	Soil	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEI
F14TB_1062375102	3300001431	Soil	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDTPWTKIGKFKDLEKERERLRVDGWEIEEPSRR*
JGI12053J15887_105084531	3300001661	Forest Soil	VATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDEKPWTEIGRFKDLAKERARLRADGWEIEEPSPR*
Ga0062590_1000269962	3300004157	Soil	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0062592_1002096923	3300004480	Soil	LGSMATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0066680_105220371	3300005174	Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLEVERARLHADGWKIEEPSRR*
Ga0066676_100008784	3300005186	Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPVDDMPWREIGRYKDLGMERARLRADGWEIEEPSRR*
Ga0065704_105053951	3300005289	Switchgrass Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGW
Ga0065715_105770532	3300005293	Miscanthus Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0065705_107402802	3300005294	Switchgrass Rhizosphere	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGW
Ga0065707_102488242	3300005295	Switchgrass Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIEEPSRR*
Ga0065707_106781702	3300005295	Switchgrass Rhizosphere	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDG
Ga0070690_1005669552	3300005330	Switchgrass Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGWEIEEPTRR*
Ga0070680_1000120083	3300005336	Corn Rhizosphere	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINQGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0070680_1000623474	3300005336	Corn Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWDIEEPSRR*
Ga0070700_1001919612	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0070662_1017858981	3300005457	Corn Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGW
Ga0070706_10000672711	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRH*
Ga0070706_1005850062	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLKVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGTFKDLEKERERLRVDGWEIEEPSRR*
Ga0070706_1021071592	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVAHGERQLVVRELRADNRVMQRINPGTPIDDTPWTEIGRFKDLDKERERLRVDGWEIEEPSRR*
Ga0070707_1010092692	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEKERARLRAHGWQIEEQSRR*
Ga0070679_1005569871	3300005530	Corn Rhizosphere	VAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWDIEEPSRR*
Ga0070695_1018942312	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GDMATLLRASLLLRVAHGERQLVVRELRADNRVMQRINPGTPIDDTPWTEIGRFKDLDKERERLRVDGWEIEEPSRR*
Ga0070704_1003929231	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0066700_101068102	3300005559	Soil	VATLLRASLLLRIGHGERQLVVRELRDDQRVMQRINPGTPIDEVPWREIGHYEDLEVERARLHADGWEIEEPSRR*
Ga0070664_1001520441	3300005564	Corn Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGWE
Ga0068857_1000204988	3300005577	Corn Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0068860_1023803181	3300005843	Switchgrass Rhizosphere	LRVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPTRR*
Ga0075417_100420882	3300006049	Populus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWVEIGRYKDLDKERERLRVDGWEIEEPSRR*
Ga0075417_101326772	3300006049	Populus Rhizosphere	VATLLRASLVLHIAHGERQLVVRELRDDQRVMQRINAGTPIDETQWTEIGRYKDLEKERARLRADGWEIEEPSRRT*
Ga0075421_1014279311	3300006845	Populus Rhizosphere	MATVLRASLVLRVGHGERQLVVRELRSDQRVMQRINLGTPIDDTPWTEIGRYKDLEKERARLQADGWEIEEQPSRR*
Ga0075433_102004404	3300006852	Populus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWKEIGRYKDLEIERARLRADGWEIEEPSRR*
Ga0075433_102398341	3300006852	Populus Rhizosphere	LRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRR*
Ga0075420_1008689662	3300006853	Populus Rhizosphere	MATVLRASLVLRVGHGERQLVVRELRSDQRVMQRINPGTPIDDTPWTEIGRYKDLEKERARLQADGWEIEEQPSRR*
Ga0075425_1002210632	3300006854	Populus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRR*
Ga0079215_114102631	3300006894	Agricultural Soil	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWTEIGRYKDLDKERERLRVDGWEIEEPSRR*
Ga0099793_106749392	3300007258	Vadose Zone Soil	LMRIGHGDRQLVIRELRADNRVMQRINPGTPVDDTPWTEIGRYKDLDKERERLRVDGWAIEEPSRR*
Ga0066710_1000214666	3300009012	Grasslands Soil	VATLLRASLLLRIGHGERQLVVRELREDLRVMQRINPGTPIDDTQWREIGRYKDLEVERARLHADGWEIEEPSRR
Ga0099829_110857121	3300009038	Vadose Zone Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLEVERARLHAEGWKIEEPSRR*
Ga0099828_102207931	3300009089	Vadose Zone Soil	HGEGQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEKERARLRADGWEIEEPSRS*
Ga0099828_104914793	3300009089	Vadose Zone Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRRQ*
Ga0099827_101594382	3300009090	Vadose Zone Soil	MTTLLRASLLLRVSHGERQLVVRELRSDQRVMQRINPGTPIDDIPWTEIGRYKDIDKERERLRVDGWEIEEPSLR*
Ga0114129_100274947	3300009147	Populus Rhizosphere	WGSVATLLRASLVLRIAHGERQLVVRELRDDQRVMQRINAGTPIDETQWTEIGRYKDLEKERARLRADGWEIEEPSRRT*
Ga0075423_1000619410	3300009162	Populus Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIAEPSRR*
Ga0075423_101778753	3300009162	Populus Rhizosphere	MATLLRASLLLQIAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEMGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0105241_103254871	3300009174	Corn Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGWEIEESSRR*
Ga0105063_10760311	3300009804	Groundwater Sand	LLLRVGHGDRQLVIRELRDDRRVMQRINPGTPVDETPWTEIGRFKDLEKERARLRADGWEIEEAIRR*
Ga0105076_10954062	3300009816	Groundwater Sand	MATLLRASLLLRVGQGERQLVVRELRADNRVMQRINPGTPIDDMPWIEIGRYKDLDKERERLRVDGWEIEEPSRR*
Ga0134111_100995612	3300010329	Grasslands Soil	MATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDDTPWREIGRYKDLEVERARLHADGWKIEEPSRR*
Ga0134080_102065722	3300010333	Grasslands Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPVDDMPWREIGRYKDLGRERARLRADGWEIEEPSRR*
Ga0134071_100139043	3300010336	Grasslands Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDETPWREIGRYKDLGIERARLRADGWEIEEPSRR*
Ga0134071_102830321	3300010336	Grasslands Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDETPWREIGRYKDLEVERARLHADGWEIEEPSRR*
Ga0134127_129706442	3300010399	Terrestrial Soil	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPTRR*
Ga0134122_125791511	3300010400	Terrestrial Soil	RGGLGSMATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR*
Ga0134123_107462432	3300010403	Terrestrial Soil	MATLLRASLLVQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWDIEEPSRR*
Ga0134123_135215812	3300010403	Terrestrial Soil	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDG
Ga0137391_104118911	3300011270	Vadose Zone Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRAHGWEIEEPRRR*
Ga0137393_107814751	3300011271	Vadose Zone Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDDRPWTEIGRYKDLEKERARLRADGWEIEEPSRR*
Ga0137388_100086183	3300012189	Vadose Zone Soil	MATLLRASLLLRLGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRRQ*
Ga0137365_112204921	3300012201	Vadose Zone Soil	MATLLRASLLLRVGHGERQLVERELREDQRVMQRINPGTPVDDMPWREIGRYKDLGMERARLRADGWEIEEPSRR*
Ga0137399_102976332	3300012203	Vadose Zone Soil	MATLVRASLLMRIGHGERQLVVRELRADNRVMQRINPGTPIDDKPWTEIGRYKDLDKELERLRVDGWAIEEPSRR*
Ga0137399_103676631	3300012203	Vadose Zone Soil	MATLVRASLLMRIGHGDRQLVIRELRADNRVMQRINPGTPVDDTPWTEIGRYKDLDKERERLRVDGWAIEEPSRR*
Ga0137399_113364491	3300012203	Vadose Zone Soil	MATLVRASLLMRIGHGERQLVVRELRADNRVMQRINPGSPIDDTPWTEIGRYKDLDKELERLRVDGWAIEEPSRR*
Ga0137374_1001093810	3300012204	Vadose Zone Soil	MTTLLRASLLLRVAHGERQLVVRELRADNRVMQRINPGTPVDDTPWTEIGRYKDLEKERERLRVDGWEIEEPSRR*
Ga0137374_101328112	3300012204	Vadose Zone Soil	VATLLRASLLLRVAHGERQLVVRELRDDNRVMQRINSGTPIDEAPWTEIGRFKDLDKERARLRADGWEIEEPSSR*
Ga0137362_100493942	3300012205	Vadose Zone Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLKVERARLHADGWKIEEPSRR*
Ga0137380_116299112	3300012206	Vadose Zone Soil	SLLLRVGHGERQLVERELREDQRVMQRINPGTPVDDMPWREIGRYKDLGMERARLRADGWEIEEPSRR*
Ga0137376_111284361	3300012208	Vadose Zone Soil	LRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLEVERARLHADGWKIEEPSRR*
Ga0137378_108410302	3300012210	Vadose Zone Soil	MATLLRASLLLRVGHGERQLVERELREDQRVMQRINPGTPVDDMPWREIGRYKDLGMERARLRAEGWEIEEPSRR*
Ga0137371_100487852	3300012356	Vadose Zone Soil	LLLRIGHGQRQLVVRELREDQRVMQRINPGTPIDDTPWREIGRYKDLEVERARLHADGWEIEEPSRR*
Ga0137375_100770212	3300012360	Vadose Zone Soil	LLRASLLLRVAHGERQLVVRELRDDHRVMQRINPGTPIDETPWTDIGRYTDLEKERARLRADGWEIEEPSRH*
Ga0137361_104244081	3300012362	Vadose Zone Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEAPWREIGRFKDLKVERARLHADGWKIEEPSRR*
Ga0134075_102474001	3300014154	Grasslands Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPVDDMPWREIGRYKDLGMERARLRADGWKIEEPSRR*
Ga0134089_102447232	3300015358	Grasslands Soil	VATLLRASLLLRIGHGERQLVVRELREDLRVMQRINPGTPIDDTQWREIGRYKDLEVERARLHADGWEIEEPSRR*
Ga0184610_10259261	3300017997	Groundwater Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWTEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0184605_102544432	3300018027	Groundwater Sediment	MATLVRASLLMRIGHGERQLVIRELRADNRVMQRINQGVPVDDSPWTEIGRYKDLDKERERLRVDGWAIEEPSRR
Ga0184605_102840272	3300018027	Groundwater Sediment	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIEEPSRR
Ga0184608_100541083	3300018028	Groundwater Sediment	MTTLLRASLLLRVAHGERQLVVRELRADNRVMQRINPGTPADDMPWTEIGRFKDLEKERERLRVDGWEIEEPSRP
Ga0184608_100858631	3300018028	Groundwater Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWIEIGRYKDFEKERERLRVDGWEIEEPSRR
Ga0184634_102547561	3300018031	Groundwater Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDTPWTEIGRFKDLDKERERLRVDGWEIEEPSRR
Ga0184626_103796351	3300018053	Groundwater Sediment	MATLLRASLLLPVGHGERQLVVRELRADNRVMQRINPGTPVDDTPWTEIGRYKDLAKERERLRVDGWEIEEPSRR
Ga0184621_100541732	3300018054	Groundwater Sediment	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIEELSRR
Ga0184619_103898481	3300018061	Groundwater Sediment	SLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKLWTEIGRYKDLEKERERLRVDGWEIEEPSRR
Ga0184618_101242581	3300018071	Groundwater Sediment	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0184618_102804122	3300018071	Groundwater Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0184640_102552262	3300018074	Groundwater Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDEKPWTEIGRFKDLDKERERLRVDGWEIEEPSRR
Ga0184632_101038312	3300018075	Groundwater Sediment	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0184609_101405091	3300018076	Groundwater Sediment	MTTLLRASLLLRVAHGERQLVVRELRADNRVMQRINPGTPADDMPWTEIGRFKDLEKERERLRVDGWEIEEP
Ga0184612_103435892	3300018078	Groundwater Sediment	MATLLRASLLLQVAHGERQLVVRELRSDKRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0184639_105269052	3300018082	Groundwater Sediment	VATLLRASLLLRIGRGERRQLVVRELRSDQRVMQRINPGTPVDDTPWTEIGRYKDLEKERARLSADGWEIEEPSRR
Ga0190272_127585131	3300018429	Soil	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDMPWTEIGRYKDLDKERERLRVDGWVIEEPSRR
Ga0066667_104071791	3300018433	Grasslands Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLEVERARLHADGWKIEEP
Ga0193739_10401002	3300020003	Soil	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDIPWIEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0210382_100420914	3300021080	Groundwater Sediment	MSTLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0210382_103545122	3300021080	Groundwater Sediment	MATLVRASLLMRIGHGERQLVIRELRADNRVMQRINQGTPVDDTPWTEIGRYKDLDKERERLRVDGWAIEEPSRR
Ga0210382_104562171	3300021080	Groundwater Sediment	RRLGGYGMATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDEKPWTEIGRYKDLAKERARLHADGWEIEEPSPR
Ga0222622_104345672	3300022756	Groundwater Sediment	MATLLRASLLLKVAHGERQLVVRELRSDQRVMQRINPGTPVDDMPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0207684_100000413	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRH
Ga0207684_100452235	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0207684_106012082	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEKERARLRADGWEIEEPSRR
Ga0207660_101136123	3300025917	Corn Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWDIEEPSRR
Ga0207660_101155992	3300025917	Corn Rhizosphere	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQRINQGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0207652_107798222	3300025921	Corn Rhizosphere	LLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWDIEEPSRR
Ga0207646_109280942	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEKERARLRAHGWQIEEQSRR
Ga0207681_116155262	3300025923	Switchgrass Rhizosphere	MATLLRASLLLQIAHGERQLVVRELPSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGWEIEEPTRR
Ga0207651_102295312	3300025960	Switchgrass Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDEKPWTEIGRFKDLEKERERLRVDGWEIEEPTRR
Ga0209438_11902631	3300026285	Grasslands Soil	MTTLLRASLLLRVGHGERQLIVRELRADNRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEEPSLR
Ga0209470_100181710	3300026324	Soil	MATLLRASLLLRVGHGERQLVVRELREDQRVMQRINPGTPVDDMPWREIGRYKDLGMERARLRADGWEIEEPSRR
Ga0209377_12483492	3300026334	Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLEVERARLHADGWKIEEPSRR
Ga0209057_10702444	3300026342	Soil	VATLLRASLLLRIGHGERQLVVRELREDQRVMQRINPGTPIDEVPWREIGRYKDLEVDRARLHADGWKIEEPSRR
Ga0257181_10602371	3300026499	Soil	MATLLRASLLLRVGHGEGQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEKERARLRADGWEIEEPSRS
Ga0209999_10645601	3300027543	Arabidopsis Thaliana Rhizosphere	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDMPWTEIGRYKDLDKERERLRVDGW
Ga0208988_11049392	3300027633	Forest Soil	VATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDEKPWTEIGRFKDLAKERARLRADGWEIEEPSPR
Ga0209818_11537872	3300027637	Agricultural Soil	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWVEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0209117_10010399	3300027645	Forest Soil	VPTLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDEQPWTEIGRFKDLAKERARLNADGWEIEEPSPR
Ga0209388_11123381	3300027655	Vadose Zone Soil	SLLLRVGHGERQLVVRELREDQRVMQRINPGTPIDERPWTEIGRYKDLEIERARLRADGWEIEEPSRR
Ga0209983_10918721	3300027665	Arabidopsis Thaliana Rhizosphere	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDIPWIEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0209971_11574751	3300027682	Arabidopsis Thaliana Rhizosphere	SLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDMPWTEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0209966_10671762	3300027695	Arabidopsis Thaliana Rhizosphere	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDMPWTEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0208989_100118504	3300027738	Forest Soil	VATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDEKPWTEIGRFKDLAKERARLHADGWEIEEPSPR
Ga0209689_10728051	3300027748	Soil	VATLLRASLLLRIGHGERQLVVRELRDDQRVMQRINPGTPIDEVPWREIGHYEDLEVERARLHADGWEIEEPSRR
Ga0209814_100643704	3300027873	Populus Rhizosphere	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIE
Ga0209481_100176502	3300027880	Populus Rhizosphere	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDMPWVEIGRYKDLDKERERLRFDGWEIEEPSRR
Ga0307293_101612222	3300028711	Soil	MTTLLRASLLLRVAHGERQLVVRELRADNRVMQRINPGTPADDMPWTEIWRFKDLEKERERLRVDGWEIEEPSRP
Ga0307299_102442351	3300028793	Soil	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIEEPSRR
Ga0307292_102393852	3300028811	Soil	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWIEIGKFKDLEKERERLRVDGWAIEEPSRR
Ga0307296_100423352	3300028819	Soil	MATLLRASLLLQVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRFKDLEKERERLRVDGWEIEELSRR
Ga0307296_101308302	3300028819	Soil	MATLVRASLLMRIGHGERQLVTRELRADNRVMQRINQGVPVDDSPWTEIGRYKDLDKERERLRVDGWAIEEPSRR
Ga0307312_110501022	3300028828	Soil	MATLLRASLLLHVAHGERQLVVRELRSDQRVMQCINPGTPADDRPWTEIGRFKDLEKERERLRVDGWEIEEPSRR
Ga0307312_110972572	3300028828	Soil	SLLLHVAHGERQLVVRELRSDQRVMQRINPGTPVDDKPWTEIGRYKDLEKERERLRVDGWEIEEPSRR
Ga0307277_100021496	3300028881	Soil	MATLVRASLLMRIGHGERQLVIRELRADNRVMQRINQGIPFDDSPWTEIGRYKDLDKERERLRVDGWAIEEPSRR
Ga0326597_114156852	3300031965	Soil	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPIDDAPWTEIGRYKDLEKERERLRVDGWEIEEPSRR
Ga0326597_117631991	3300031965	Soil	MATLLRASLLLRIAHGERQLVVRELRADNRVMQRINPGTPIDDTPWTEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0364934_0160801_351_578	3300034178	Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDTPWTEIGRYKDLDKERERLRVDGWEIEEPSRR
Ga0364936_028526_334_561	3300034773	Sediment	MATLLRASLLLRVGHGERQLVVRELRADNRVMQRINPGTPVDDKPWIEIGRYKDLDKERERLRVDGWEIEEPSRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057753

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences