Metagenome / Metatranscriptome Family F057619

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057619
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	75 residues
Representative Sequence	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPVERGGPQE
Number of Associated Samples	114
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.29 %
% of genes near scaffold ends (potentially truncated)	32.35 %
% of genes from short scaffolds (< 2000 bps)	86.76 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.706 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.588 % of family members)
Environment Ontology (ENVO)	Unclassified (32.353 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.676 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.27% β-sheet: 15.85% Coil/Unstructured: 54.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF12697	Abhydrolase_6	30.88
PF02775	TPP_enzyme_C	21.32
PF09413	DUF2007	15.44
PF01855	POR_N	1.47
PF08281	Sigma70_r4_2	1.47
PF00551	Formyl_trans_N	0.74
PF07690	MFS_1	0.74
PF00005	ABC_tran	0.74
PF02518	HATPase_c	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	1.47
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	1.47

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.44 %
Unclassified	root	N/A	9.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.71 %
Unclassified	root	N/A	9.56 %
Viruses	superkingdom	All Organisms → Viruses	0.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.71 %
Unclassified	root	N/A	9.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.00 %
Unclassified	root	N/A	9.56 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.00 %
Unclassified	root	N/A	9.56 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.06 %
Unclassified	root	N/A	9.56 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.50 %
Unclassified	root	N/A	9.56 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.21 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.74 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.50 %
Unclassified	root	N/A	9.56 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.21 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.74 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.50 %
Unclassified	root	N/A	9.56 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.21 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig506873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3080	Open in IMG/M
2228664021\|ICCgaii200_c0844904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300000953\|JGI11615J12901_12194879	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300001431\|F14TB_100180086	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300002911\|JGI25390J43892_10046935	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300002915\|JGI25387J43893_1034153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	684	Open in IMG/M
3300004156\|Ga0062589_101204385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	725	Open in IMG/M
3300005166\|Ga0066674_10066955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1641	Open in IMG/M
3300005167\|Ga0066672_10743855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300005177\|Ga0066690_10563866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300005178\|Ga0066688_10105273	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300005178\|Ga0066688_10817368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300005181\|Ga0066678_10044482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2502	Open in IMG/M
3300005187\|Ga0066675_10004727	All Organisms → cellular organisms → Bacteria	6615	Open in IMG/M
3300005334\|Ga0068869_100426550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1095	Open in IMG/M
3300005338\|Ga0068868_100149979	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300005339\|Ga0070660_100924470	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005353\|Ga0070669_101983920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005355\|Ga0070671_100723986	Not Available	864	Open in IMG/M
3300005406\|Ga0070703_10074407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300005437\|Ga0070710_11452840	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005439\|Ga0070711_101053290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300005440\|Ga0070705_100209094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1344	Open in IMG/M
3300005441\|Ga0070700_101803547	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005445\|Ga0070708_100034856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4382	Open in IMG/M
3300005445\|Ga0070708_100732964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	930	Open in IMG/M
3300005445\|Ga0070708_101818819	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005450\|Ga0066682_10574678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300005468\|Ga0070707_100007137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10359	Open in IMG/M
3300005471\|Ga0070698_100449780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300005549\|Ga0070704_101234242	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005553\|Ga0066695_10248391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1122	Open in IMG/M
3300005553\|Ga0066695_10308767	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300005556\|Ga0066707_10257929	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300005556\|Ga0066707_10295531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300005556\|Ga0066707_10452068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300005560\|Ga0066670_10642652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300005561\|Ga0066699_10295175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1153	Open in IMG/M
3300005574\|Ga0066694_10574211	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006032\|Ga0066696_10456059	Not Available	838	Open in IMG/M
3300006046\|Ga0066652_100460364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1173	Open in IMG/M
3300006173\|Ga0070716_100515705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300006574\|Ga0074056_10667402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300006579\|Ga0074054_11956690	Not Available	1162	Open in IMG/M
3300006797\|Ga0066659_10224869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1389	Open in IMG/M
3300006797\|Ga0066659_11540619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300006881\|Ga0068865_101794154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300009012\|Ga0066710_103285215	Not Available	618	Open in IMG/M
3300009092\|Ga0105250_10122349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300009098\|Ga0105245_10135028	All Organisms → cellular organisms → Bacteria	2318	Open in IMG/M
3300009545\|Ga0105237_10618737	Not Available	1090	Open in IMG/M
3300010301\|Ga0134070_10086897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300010322\|Ga0134084_10156733	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300010323\|Ga0134086_10083020	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300010329\|Ga0134111_10562008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300010401\|Ga0134121_10622854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300010999\|Ga0138505_100051831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012198\|Ga0137364_10461390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300012199\|Ga0137383_10299608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1177	Open in IMG/M
3300012201\|Ga0137365_10013891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6332	Open in IMG/M
3300012201\|Ga0137365_10165708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300012209\|Ga0137379_10484071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1146	Open in IMG/M
3300012209\|Ga0137379_11076794	Not Available	709	Open in IMG/M
3300012211\|Ga0137377_10655181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
3300012211\|Ga0137377_11438369	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012285\|Ga0137370_10230730	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300012285\|Ga0137370_10373687	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300012350\|Ga0137372_10010965	All Organisms → cellular organisms → Bacteria	8694	Open in IMG/M
3300012350\|Ga0137372_10098438	All Organisms → cellular organisms → Bacteria	2458	Open in IMG/M
3300012350\|Ga0137372_10291993	Not Available	1267	Open in IMG/M
3300012353\|Ga0137367_10313948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300012362\|Ga0137361_10265361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1567	Open in IMG/M
3300012386\|Ga0134046_1111894	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300012532\|Ga0137373_10613608	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300012582\|Ga0137358_10121647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300012685\|Ga0137397_10027043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4066	Open in IMG/M
3300012951\|Ga0164300_10392097	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300012961\|Ga0164302_10194829	All Organisms → Viruses → Predicted Viral	1240	Open in IMG/M
3300012961\|Ga0164302_10500792	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012984\|Ga0164309_11702104	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012985\|Ga0164308_10574991	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300013296\|Ga0157374_11749663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300013307\|Ga0157372_11744253	Not Available	716	Open in IMG/M
3300013308\|Ga0157375_12707680	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300014157\|Ga0134078_10273822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300014497\|Ga0182008_10309177	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300015358\|Ga0134089_10050443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300017654\|Ga0134069_1071518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300018027\|Ga0184605_10004911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4790	Open in IMG/M
3300018027\|Ga0184605_10090857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300018071\|Ga0184618_10205893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300018431\|Ga0066655_10419140	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300018431\|Ga0066655_10883257	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300018433\|Ga0066667_10314584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300018433\|Ga0066667_10416813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1089	Open in IMG/M
3300018433\|Ga0066667_12190099	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300018482\|Ga0066669_10190917	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300019279\|Ga0184642_1309707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300019356\|Ga0173481_10067703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1282	Open in IMG/M
3300019873\|Ga0193700_1033440	Not Available	842	Open in IMG/M
3300019875\|Ga0193701_1039319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300019875\|Ga0193701_1095949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300019887\|Ga0193729_1002339	All Organisms → cellular organisms → Bacteria	9493	Open in IMG/M
3300020022\|Ga0193733_1047405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300020170\|Ga0179594_10070814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300021080\|Ga0210382_10475086	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300025901\|Ga0207688_10402748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300025910\|Ga0207684_10359316	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300025916\|Ga0207663_10423420	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300025922\|Ga0207646_10314529	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300025942\|Ga0207689_11836479	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300026295\|Ga0209234_1057797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1475	Open in IMG/M
3300026300\|Ga0209027_1004803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5082	Open in IMG/M
3300026327\|Ga0209266_1127697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1070	Open in IMG/M
3300026330\|Ga0209473_1278623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300026547\|Ga0209156_10477674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300026548\|Ga0209161_10052051	All Organisms → cellular organisms → Bacteria	2671	Open in IMG/M
3300026552\|Ga0209577_10078115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2727	Open in IMG/M
3300028587\|Ga0247828_10264826	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300028705\|Ga0307276_10182665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300028709\|Ga0307279_10025503	Not Available	845	Open in IMG/M
3300028714\|Ga0307309_10168443	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300028717\|Ga0307298_10008297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2555	Open in IMG/M
3300028721\|Ga0307315_10196638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300028722\|Ga0307319_10217302	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300028768\|Ga0307280_10333759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300028778\|Ga0307288_10156806	Not Available	859	Open in IMG/M
3300028778\|Ga0307288_10393216	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300028799\|Ga0307284_10005678	All Organisms → cellular organisms → Bacteria	3511	Open in IMG/M
3300028811\|Ga0307292_10179334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300028881\|Ga0307277_10080936	Not Available	1359	Open in IMG/M
3300028881\|Ga0307277_10127672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300028881\|Ga0307277_10326279	Not Available	682	Open in IMG/M
3300031093\|Ga0308197_10372769	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300033412\|Ga0310810_10122563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3064	Open in IMG/M
3300034681\|Ga0370546_067192	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.97%
Host-Associated	Host-Associated	11.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.29%
Plants	Host-Associated → Plants	11.03%
Aquatic	Environmental → Aquatic	3.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.68%
Sediment	Environmental → Aquatic → Sediment	2.21%
Freshwater	Environmental → Aquatic → Freshwater	1.47%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.79%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.47%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.21%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_14359580	2124908045	Soil	VDDLVVIETVPTVMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGSPQE
ICCgaii200_08449042	2228664021	Soil	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREXVVRSEDADEATKALAAQRADPVERGDPQE
JGI11615J12901_121948793	3300000953	Soil	VDDLVVIETVPTVMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGSPQE*
F14TB_1001800862	3300001431	Soil	VDDLVVIETVPTVMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGRPQE*
JGI25390J43892_100469352	3300002911	Grasslands Soil	MEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
JGI25387J43893_10341532	3300002915	Grasslands Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDARS*
Ga0062589_1012043852	3300004156	Soil	MEAGLICGILRNVGIRCLDRPTNFSAAANDGWPSGGWREIVVRGEDADEAREVLAAQRATPGTDN*
Ga0066674_100669552	3300005166	Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
Ga0066672_107438551	3300005167	Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRATPGADN*
Ga0066690_105638662	3300005177	Soil	VETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPQSRS*
Ga0066688_101052733	3300005178	Soil	MEASLICGVLRNVGIRCLDRPTNFAAGANDGWPSGGWREIVVRGEDADEARKVLAAQRADPHTRN*
Ga0066688_108173681	3300005178	Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
Ga0066678_100444822	3300005181	Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDSRS*
Ga0066675_100047275	3300005187	Soil	MEASLICGILRNVGIRCLDRPTNFAAGANDGWPSGGWREIVVRGEDADEARKVLAAQRADPRTRN*
Ga0068869_1004265502	3300005334	Miscanthus Rhizosphere	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0068868_1001499792	3300005338	Miscanthus Rhizosphere	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE*
Ga0070660_1009244702	3300005339	Corn Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE*
Ga0070669_1019839202	3300005353	Switchgrass Rhizosphere	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0070671_1007239861	3300005355	Switchgrass Rhizosphere	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRGEDADEATKALAEQRADPVERGDPQE*
Ga0070703_100744072	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE*
Ga0070710_114528402	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE*
Ga0070711_1010532902	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE*
Ga0070705_1002090942	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEAGLICGILRNVGIRCLDRPTNFSAAANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGTDN*
Ga0070700_1018035471	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE*
Ga0070708_1000348565	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VDDLVVVETVPTAMEAGLVCGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPGGRK*
Ga0070708_1007329641	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSSEDADEAREVLAAQRADPESRS*
Ga0070708_1018188192	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0066682_105746782	3300005450	Soil	MEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPVERGGPQE*
Ga0070707_10000713711	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEAGLVCGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPGGRK*
Ga0070698_1004497802	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0070704_1012342422	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE
Ga0066695_102483912	3300005553	Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDSRS*
Ga0066695_103087672	3300005553	Soil	PTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
Ga0066707_102579291	3300005556	Soil	CGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
Ga0066707_102955312	3300005556	Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSSEDADEAREVLAAQRADPDSRS*
Ga0066707_104520682	3300005556	Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRATPGADN*
Ga0066670_106426522	3300005560	Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDARS*
Ga0066699_102951752	3300005561	Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSSEDAGEAREVLAAQRADPDARS*
Ga0066694_105742111	3300005574	Soil	AMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPVERGGPQE*
Ga0066696_104560592	3300006032	Soil	VDDFVVVETVPTVMEASLICGILRNVGIRCLDRPTNFAAGANDGWPSGGWREIVVRGEDADEARK
Ga0066652_1004603642	3300006046	Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEARDVLAAQRADPVERGGPQE*
Ga0070716_1005157052	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VDDFVVIETVPTTMEAGLICGILRNVGIRCLDRPTNFSAAANDGWPSGGWREIVGRGDDADEAREVLAAQRATPGTDN*
Ga0074056_106674022	3300006574	Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGADN*
Ga0074054_119566901	3300006579	Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGADN*
Ga0066659_102248693	3300006797	Soil	VDDFVVVETVPTVMEASLICGVLRNVGIRCLDRPTNFAAGANDGWPSGGWREIVVRGEDADEARK
Ga0066659_115406191	3300006797	Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDART*
Ga0068865_1017941542	3300006881	Miscanthus Rhizosphere	CRTADCGRLVDDLVVLEAVPTVMEATLICEILRDEGIKCLDRPTNFGAGANDGWPGGGSREIVVRSEDLEKARSVLELQRRSGL*
Ga0066710_1032852152	3300009012	Grasslands Soil	MEASLICGILRNVGIRCLDRPTNFAAGANDGWPSGGWREIVVRGEDADEARKVLAAQRADPRTRN
Ga0105250_101223492	3300009092	Switchgrass Rhizosphere	MDDLVVIETIPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0105245_101350284	3300009098	Miscanthus Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE*
Ga0105237_106187372	3300009545	Corn Rhizosphere	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREDVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0134070_100868972	3300010301	Grasslands Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPVERGGPQE*
Ga0134084_101567331	3300010322	Grasslands Soil	VDDLVVIETVPTAMEAALICGILRNMGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
Ga0134086_100830201	3300010323	Grasslands Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGGPQG*
Ga0134111_105620082	3300010329	Grasslands Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDV
Ga0134121_106228542	3300010401	Terrestrial Soil	VDDLVVIETVPTAMEAGLVCGILRNVWIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0138505_1000518312	3300010999	Soil	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE*
Ga0137364_104613902	3300012198	Vadose Zone Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPESRS*
Ga0137383_102996081	3300012199	Vadose Zone Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVER
Ga0137365_100138917	3300012201	Vadose Zone Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREALAAQRADPVERGGPQE*
Ga0137365_101657083	3300012201	Vadose Zone Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADP
Ga0137379_104840712	3300012209	Vadose Zone Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPGERGGPQE*
Ga0137379_110767942	3300012209	Vadose Zone Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGAD*
Ga0137377_106551812	3300012211	Vadose Zone Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSSEDADEAREVLAAQRADPESRN*
Ga0137377_114383692	3300012211	Vadose Zone Soil	DDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDANEAREVLAAQRAAPGADN*
Ga0137370_102307302	3300012285	Vadose Zone Soil	ILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLVAQRADPGERGGPQE*
Ga0137370_103736871	3300012285	Vadose Zone Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVASGEDADEAREVLAAQRADPDART*
Ga0137372_100109654	3300012350	Vadose Zone Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREALAAQRADPVERGDPQE*
Ga0137372_100984383	3300012350	Vadose Zone Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRADPGAD*
Ga0137372_102919931	3300012350	Vadose Zone Soil	VDDLVVVETVPTATEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRAEDADEAREVL
Ga0137367_103139482	3300012353	Vadose Zone Soil	VDDLVVIETVPTAMQAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREALAAQRADPVERGGPQE*
Ga0137361_102653612	3300012362	Vadose Zone Soil	MDDLVVIETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSSQDADEAREVLAAQRADPESRS*
Ga0134046_11118942	3300012386	Grasslands Soil	VIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPVERGGPQE*
Ga0137373_106136081	3300012532	Vadose Zone Soil	PTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREALAAQRADPVERGGPQE*
Ga0137358_101216472	3300012582	Vadose Zone Soil	VDDFVVIETVPTTMEAGLICGILRNVGIRCLDRATNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRATPGADN*
Ga0137397_100270434	3300012685	Vadose Zone Soil	VDDFVVIETVPTTMEAGLICGILRNVGIRCLDRATNFSAGANDGWPSGGWREIVVRGEVADDAREVLAAQRATPGADN*
Ga0164300_103920971	3300012951	Soil	GLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGADN*
Ga0164302_101948292	3300012961	Soil	VDDFVVIETVPTTMEAGLICGILRNVGIRCLDRPTNFSAAANDGWPSGGCREIVVRGEDADEAREVLAAQRATPGTDN*
Ga0164302_105007922	3300012961	Soil	VPTTMEAGLICGILRNVGIRCLDRPTNLSAAARDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGADN*
Ga0164309_117021042	3300012984	Soil	YGGHVDDFVVIETVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGADN*
Ga0164308_105749911	3300012985	Soil	VVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE*
Ga0157374_117496631	3300013296	Miscanthus Rhizosphere	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDLQE*
Ga0157372_117442531	3300013307	Corn Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPV
Ga0157375_127076801	3300013308	Miscanthus Rhizosphere	PTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE*
Ga0134078_102738221	3300014157	Grasslands Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGGPQE*
Ga0182008_103091771	3300014497	Rhizosphere	AALICGILRNVGIRCLDRPTNFSAGAKEGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGRPQE*
Ga0134089_100504432	3300015358	Grasslands Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE*
Ga0134069_10715182	3300017654	Grasslands Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREALAAQRADPEERGDPQE
Ga0184605_100049111	3300018027	Groundwater Sediment	VETVPTVTEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRGEDADEAREVLAAQRADPRARN
Ga0184605_100908572	3300018027	Groundwater Sediment	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPMNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGGPQE
Ga0184618_102058931	3300018071	Groundwater Sediment	VDDFVVVETVPTVMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRGEDADEAREVLAAQRADPRARN
Ga0066655_104191402	3300018431	Grasslands Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDARR
Ga0066655_108832571	3300018431	Grasslands Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDSRS
Ga0066667_103145842	3300018433	Grasslands Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDSRS
Ga0066667_104168132	3300018433	Grasslands Soil	VDDLVVVETVPTVTEASLICGILRNVGIRCLDRSTNFSAGANDGWPSGGWREVVVRGEDADEAREVLAAQRADPRARN
Ga0066667_121900992	3300018433	Grasslands Soil	LICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPVERGGPQE
Ga0066669_101909173	3300018482	Grasslands Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRAAPDARS
Ga0184642_13097072	3300019279	Groundwater Sediment	VDDLVVIETVPTAMEAGLVCGILRNIGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRAHPLERGDPQE
Ga0173481_100677032	3300019356	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE
Ga0193700_10334402	3300019873	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPV
Ga0193701_10393192	3300019875	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE
Ga0193701_10959492	3300019875	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGGPQE
Ga0193729_10023392	3300019887	Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRATPGADN
Ga0193733_10474052	3300020022	Soil	VDDLVVIESVPTTMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEAREVLAAQRAAPGADN
Ga0179594_100708142	3300020170	Vadose Zone Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE
Ga0210382_104750861	3300021080	Groundwater Sediment	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGGPPE
Ga0207688_104027482	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQE
Ga0207684_103593162	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VDDLVVVETVPTAMEAGLVCGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDADEAREVLAAQRADPGGRK
Ga0207663_104234201	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE
Ga0207646_103145292	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGDPQE
Ga0207689_118364791	3300025942	Miscanthus Rhizosphere	ILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDPQ
Ga0209234_10577972	3300026295	Grasslands Soil	MEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPVERGGPQE
Ga0209027_10048038	3300026300	Grasslands Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDARS
Ga0209266_11276972	3300026327	Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEARDVLAAQRADPGERGGPQE
Ga0209473_12786231	3300026330	Soil	MDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPDARS
Ga0209156_104776741	3300026547	Soil	TVPTVTEASLICGILRNVGIRCLDRSTNFSAGANDGWPSGGWREVVVRGEDADEAREVLAAQRADPRARN
Ga0209161_100520516	3300026548	Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSSEDADEAREVLAAQRADPDSRS
Ga0209577_100781152	3300026552	Soil	VDDLVVVETVPTAMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVSGEDADEAREVLAAQRADPQSRS
Ga0247828_102648261	3300028587	Soil	VIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGDLQE
Ga0307276_101826652	3300028705	Soil	VDDFVVVETVPTVMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRGEDANEAREVLAAQRADPRARN
Ga0307279_100255032	3300028709	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGG
Ga0307309_101684431	3300028714	Soil	VCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEPQE
Ga0307298_100082971	3300028717	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVERGEP
Ga0307315_101966382	3300028721	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALA
Ga0307319_102173021	3300028722	Soil	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGGP
Ga0307280_103337592	3300028768	Soil	MEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQRADPVER
Ga0307288_101568061	3300028778	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAEQR
Ga0307288_103932161	3300028778	Soil	ILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGGPQ
Ga0307284_100056785	3300028799	Soil	VDDFVVVETVPTVMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRGEDADEAREVLAAQRADPHARN
Ga0307292_101793343	3300028811	Soil	TVPTVMEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRGEDADEAREVLAAQRADPHARN
Ga0307277_100809363	3300028881	Soil	VDDFVVVETVPTVMEASLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREVVVRGEDANEAREVLAAQRADPRARN
Ga0307277_101276722	3300028881	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKAL
Ga0307277_103262792	3300028881	Soil	VDDLVVVETVPTVTEAGLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVRGEDADEARQVLAAQRADPRARN
Ga0308197_103727691	3300031093	Soil	VDDLVVIETVPTAMEAALICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPVERGGPQE
Ga0310810_101225633	3300033412	Soil	VDDLVVIETVPTAMEAGLVCGILRNVGIRCFDRPTNFAAGANDGWALSGWREVVVRSEDADEATKALAAQRADPVERGYPQE
Ga0370546_067192_33_242	3300034681	Soil	MEASLICGILRNVGIRCLDRPTNFSAGANDGWPSGGWREIVVSGEDAEEAREVLAAQRADPLERGDPQE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057619

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences