Metagenome / Metatranscriptome Family F057597

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057597
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	74 residues
Representative Sequence	RELVAVSHLIREVGEALESVAETLADGVVEESELRTTIPKLEAVIQECASLKYLLEDLSKKRKKKSKNQR
Number of Associated Samples	117
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.82 %
% of genes near scaffold ends (potentially truncated)	90.44 %
% of genes from short scaffolds (< 2000 bps)	88.97 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (85.294 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (8.823 % of family members)
Environment Ontology (ENVO)	Unclassified (23.529 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.529 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.27% β-sheet: 0.00% Coil/Unstructured: 36.73%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.238.1.3: IMD domain	d1y2oa1	1y2o	0.82509
a.29.3.0: automated matches	d6u1va2	6u1v	0.81278
a.7.7.1: BAG domain	d1t7sa_	1t7s	0.80057
a.29.3.0: automated matches	d4hr3a2	4hr3	0.79213
a.183.1.1: Nop domain	d1nt2b_	1nt2	0.78923

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF07238	PilZ	5.15
PF01740	STAS	2.21
PF00582	Usp	1.47
PF00456	Transketolase_N	1.47
PF00196	GerE	1.47
PF09907	HigB_toxin	1.47
PF00392	GntR	1.47
PF00871	Acetate_kinase	1.47
PF07963	N_methyl	1.47
PF00072	Response_reg	0.74
PF14332	DUF4388	0.74
PF00994	MoCF_biosynth	0.74
PF13561	adh_short_C2	0.74
PF00581	Rhodanese	0.74
PF09278	MerR-DNA-bind	0.74
PF02922	CBM_48	0.74
PF08532	Glyco_hydro_42M	0.74
PF03060	NMO	0.74
PF09364	XFP_N	0.74
PF00486	Trans_reg_C	0.74
PF13620	CarboxypepD_reg	0.74
PF13701	DDE_Tnp_1_4	0.74
PF13466	STAS_2	0.74
PF01590	GAF	0.74
PF03916	NrfD	0.74
PF13795	HupE_UreJ_2	0.74
PF14748	P5CR_dimer	0.74
PF00480	ROK	0.74
PF02357	NusG	0.74
PF00069	Pkinase	0.74
PF13505	OMP_b-brl	0.74
PF04366	Ysc84	0.74
PF00782	DSPc	0.74
PF00723	Glyco_hydro_15	0.74
PF07732	Cu-oxidase_3	0.74
PF13185	GAF_2	0.74
PF10417	1-cysPrx_C	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.94
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	1.47
COG0282	Acetate kinase	Energy production and conversion [C]	1.47
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.47
COG3426	Butyrate kinase	Energy production and conversion [C]	1.47
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	1.47
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.74
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.74
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.74
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.74
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.74
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.74
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.74
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.03 %
Unclassified	root	N/A	13.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.03 %
Unclassified	root	N/A	13.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.29 %
Unclassified	root	N/A	13.97 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.53 %
Unclassified	root	N/A	13.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.74 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.18 %
Unclassified	root	N/A	13.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.82 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.09 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.09 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.74 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.94 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.74 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.47 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.74 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.47 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.74 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.47 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	0.74 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.18 %
Unclassified	root	N/A	13.97 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.47 %
Leotiomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes	0.74 %
Nitrospira sp. KM1	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10024379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3664	Open in IMG/M
3300000789\|JGI1027J11758_12776018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1054	Open in IMG/M
3300002245\|JGIcombinedJ26739_101738323	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300004091\|Ga0062387_100394253	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300004091\|Ga0062387_100507904	Not Available	843	Open in IMG/M
3300004092\|Ga0062389_100543919	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300004152\|Ga0062386_100353676	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300004643\|Ga0062591_102739063	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300005177\|Ga0066690_10962197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005439\|Ga0070711_101463953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300005459\|Ga0068867_101991795	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300005468\|Ga0070707_101361790	Not Available	676	Open in IMG/M
3300005471\|Ga0070698_102045885	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005530\|Ga0070679_101897719	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005534\|Ga0070735_10000649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	36321	Open in IMG/M
3300005536\|Ga0070697_101905808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005542\|Ga0070732_10786630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005548\|Ga0070665_100969209	All Organisms → cellular organisms → Bacteria → Acidobacteria	863	Open in IMG/M
3300005602\|Ga0070762_10849198	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005712\|Ga0070764_10962496	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300006028\|Ga0070717_10378486	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M
3300006046\|Ga0066652_100618432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300006102\|Ga0075015_100590696	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300006102\|Ga0075015_100784323	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300006174\|Ga0075014_100055590	All Organisms → cellular organisms → Bacteria → Acidobacteria	1717	Open in IMG/M
3300006174\|Ga0075014_100842682	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	545	Open in IMG/M
3300006176\|Ga0070765_100491398	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300006797\|Ga0066659_10786148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300006797\|Ga0066659_11786801	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300006871\|Ga0075434_100794093	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300006893\|Ga0073928_10110189	All Organisms → cellular organisms → Bacteria → Acidobacteria	2290	Open in IMG/M
3300006914\|Ga0075436_100020590	All Organisms → cellular organisms → Bacteria	4527	Open in IMG/M
3300009148\|Ga0105243_12302299	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300009177\|Ga0105248_10030483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6022	Open in IMG/M
3300009623\|Ga0116133_1220620	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300010043\|Ga0126380_10752213	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300010321\|Ga0134067_10397177	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300010343\|Ga0074044_10543500	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300010343\|Ga0074044_10802542	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300010361\|Ga0126378_10382877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1518	Open in IMG/M
3300010366\|Ga0126379_13093181	Not Available	557	Open in IMG/M
3300010376\|Ga0126381_100157514	All Organisms → cellular organisms → Bacteria	2990	Open in IMG/M
3300010376\|Ga0126381_104856773	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300010398\|Ga0126383_10457619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300010937\|Ga0137776_1256162	Not Available	757	Open in IMG/M
3300011269\|Ga0137392_11234765	Not Available	606	Open in IMG/M
3300011270\|Ga0137391_10010546	All Organisms → cellular organisms → Bacteria	7374	Open in IMG/M
3300011271\|Ga0137393_10553287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300011271\|Ga0137393_11111614	Not Available	672	Open in IMG/M
3300012202\|Ga0137363_11739656	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300012209\|Ga0137379_11522343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012353\|Ga0137367_10491777	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300012363\|Ga0137390_10341002	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300012363\|Ga0137390_11764983	Not Available	551	Open in IMG/M
3300012532\|Ga0137373_10158989	Not Available	1898	Open in IMG/M
3300012971\|Ga0126369_10032232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4326	Open in IMG/M
3300014489\|Ga0182018_10434648	All Organisms → cellular organisms → Bacteria → Acidobacteria	699	Open in IMG/M
3300015242\|Ga0137412_11079597	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes	570	Open in IMG/M
3300016422\|Ga0182039_10551990	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300016422\|Ga0182039_11710344	Not Available	575	Open in IMG/M
3300016445\|Ga0182038_11443653	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300017932\|Ga0187814_10306514	Not Available	608	Open in IMG/M
3300017933\|Ga0187801_10066892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300017933\|Ga0187801_10378601	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300017934\|Ga0187803_10188438	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300017934\|Ga0187803_10237608	Not Available	721	Open in IMG/M
3300017943\|Ga0187819_10416162	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300017955\|Ga0187817_10177752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1355	Open in IMG/M
3300017955\|Ga0187817_10259596	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300017972\|Ga0187781_10365423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300017975\|Ga0187782_10752641	Not Available	752	Open in IMG/M
3300018006\|Ga0187804_10070263	Not Available	1400	Open in IMG/M
3300018006\|Ga0187804_10592455	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300018086\|Ga0187769_10351523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300018086\|Ga0187769_11556819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300018482\|Ga0066669_10489687	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300019785\|Ga0182022_1070106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1609	Open in IMG/M
3300020580\|Ga0210403_11109311	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300020583\|Ga0210401_11569367	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300021168\|Ga0210406_10387701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300021181\|Ga0210388_10158611	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300021407\|Ga0210383_11103601	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300021407\|Ga0210383_11549502	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300021559\|Ga0210409_10338323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1353	Open in IMG/M
3300021559\|Ga0210409_10741484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300021861\|Ga0213853_11362081	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300022721\|Ga0242666_1051836	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300024283\|Ga0247670_1099811	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300025320\|Ga0209171_10069302	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300025906\|Ga0207699_11282879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300025921\|Ga0207652_11614355	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300025935\|Ga0207709_11610322	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300026089\|Ga0207648_10957769	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300026309\|Ga0209055_1016664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3637	Open in IMG/M
3300026313\|Ga0209761_1096306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M
3300026552\|Ga0209577_10650151	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300027047\|Ga0208730_1042212	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300027070\|Ga0208365_1046841	All Organisms → cellular organisms → Bacteria → Acidobacteria	579	Open in IMG/M
3300027073\|Ga0208366_1006630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1174	Open in IMG/M
3300027172\|Ga0208098_1033566	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300027567\|Ga0209115_1019688	Not Available	1493	Open in IMG/M
3300027662\|Ga0208565_1011972	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3431	Open in IMG/M
3300027678\|Ga0209011_1015458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2514	Open in IMG/M
3300027853\|Ga0209274_10008809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4556	Open in IMG/M
3300027874\|Ga0209465_10320541	Not Available	776	Open in IMG/M
3300027884\|Ga0209275_10457399	Not Available	724	Open in IMG/M
3300027884\|Ga0209275_10750703	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300027898\|Ga0209067_10953975	Not Available	506	Open in IMG/M
3300027986\|Ga0209168_10001824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	16124	Open in IMG/M
3300028379\|Ga0268266_10875661	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300028536\|Ga0137415_11126785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300028800\|Ga0265338_10913877	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300030054\|Ga0302182_10292909	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300030057\|Ga0302176_10130380	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300030057\|Ga0302176_10307388	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300030760\|Ga0265762_1051631	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300030814\|Ga0265741_105683	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300030878\|Ga0265770_1154096	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300030991\|Ga0073994_10070886	All Organisms → cellular organisms → Bacteria → Acidobacteria	1032	Open in IMG/M
3300031234\|Ga0302325_10674455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300031720\|Ga0307469_12349890	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300031744\|Ga0306918_10706164	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300031823\|Ga0307478_11028100	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300031890\|Ga0306925_12178200	Not Available	516	Open in IMG/M
3300032076\|Ga0306924_10296316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1857	Open in IMG/M
3300032205\|Ga0307472_100947574	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300032261\|Ga0306920_101294472	Not Available	1049	Open in IMG/M
3300032783\|Ga0335079_11027013	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300032783\|Ga0335079_11176603	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300032892\|Ga0335081_10466341	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp. KM1	1601	Open in IMG/M
3300032955\|Ga0335076_10558529	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300033004\|Ga0335084_11302388	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300033289\|Ga0310914_11628200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300033412\|Ga0310810_10056477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4770	Open in IMG/M
3300033513\|Ga0316628_100432780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1681	Open in IMG/M
3300033545\|Ga0316214_1070985	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.91%
Host-Associated	Host-Associated	8.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.26%
Aquatic	Environmental → Aquatic	17.65%
Plants	Host-Associated → Plants	8.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.32%
Freshwater	Environmental → Aquatic → Freshwater	11.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.88%
Sediment	Environmental → Aquatic → Sediment	3.68%
Peat	Environmental → Terrestrial → Peat	2.94%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.47%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.85%
Loam	Environmental → Terrestrial → Soil → Loam	16.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.94%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.47%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.21%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.41%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.21%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.47%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.47%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.74%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.74%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100243791	3300000567	Peatlands Soil	AVSHLIREVGEALESVAETLADGIVEENELRITIPKLEAVIQECASLKYLLEDLCKKRKKKTKG*
JGI1027J11758_127760183	3300000789	Soil	VGEALESVGETLEDGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKKSR*
JGIcombinedJ26739_1017383232	3300002245	Forest Soil	VAFKLPDPKMTLEKELLAISNLIREVGEALESVAETLADGVVEESELRSTVPKLEGVIQECASLKYLLEDLSKRRKKRTRNX*
Ga0062387_1003942533	3300004091	Bog Forest Soil	VSSLIREVGEALESVAETLADGIVEESELRSTVPKLEGVIQECASLKYLLEDLSKRRKKRTRNQ*
Ga0062387_1005079041	3300004091	Bog Forest Soil	GGEILAVSSLLREVGEALESVAATLADGNVEESELRETVPRLEGVIQECASLKYLLEDLCKKKKKKIKR*
Ga0062389_1005439192	3300004092	Bog Forest Soil	DSHVTPGKEILAISSLLKEVGEALESVAATLADGNVEESELQETVPRLEGVIQECASLKYLLEDLCKKKKKKTKR*
Ga0062386_1003536761	3300004152	Bog Forest Soil	GRVAFKLPEPDTTLERELVAVSHLIREVGEALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLSKRRKKKPKNRR*
Ga0062591_1027390631	3300004643	Soil	QVSLEKELVAVSNLIREVGEALESVAVTIADGVVNEPELKVTIPRIEAVIQECASLKYLLEDLCRKRKKKSSGEHSRPR*
Ga0066690_109621972	3300005177	Soil	VAVSHLIKEVGEALESVAGTLADGVVEDNELRRTIPKIEAVIQECASLKYLLEDLCTKRKKKSRADRTVSR*
Ga0070711_1014639532	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EKELLAVSHLIREVGEALESIAETIADGTIEEGELKTTIPKIEAVIQECASLRYLLEDLCRKKKGKRKADRVASR*
Ga0068867_1019917951	3300005459	Miscanthus Rhizosphere	AVSNLLKEVGEALESVAETLADGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR*
Ga0070707_1013617901	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GEALESVAETLADGAVEENELKATIPKLEGVIQECASLKYVLEDLCKKSRKKRKNWPARTR*
Ga0070698_1020458851	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VAFKLPDPHVTLEKQLVAISNLIKEVGEALESVAETLADGVVEENELKATIPKLEGVIQECASLKYVLEDLC
Ga0070679_1018977192	3300005530	Corn Rhizosphere	AVSNLIREVGEALESVAVTIADGVVNEPELKVTIPRIEAVIQECASLKYLLEDLCRKRKKKSSGEHSRPR*
Ga0070735_100006496	3300005534	Surface Soil	MCSSAQQEFAAVTSHIREVGEALEGIGEIFADDVVEERDLRITIPKLEAVIRECASLKYLLEDLALKKNKKKNR*
Ga0070697_1019058082	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTSEKELLAVSHLIREVGEALESVAETIADGTVEENELKTTLPKLEAVIQECASLKYLLEDLCKKKKGKRKANRTIR*
Ga0070732_107866301	3300005542	Surface Soil	LEKELVAISNLIREVGDALESVGATLADGVVEEKELRVTIPKLEAVIRECASLKYLLEDLCEQRKKKRKT*
Ga0070665_1009692092	3300005548	Switchgrass Rhizosphere	SRLTSEKELLAVSNLLKEVGEALESVAETLADGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR*
Ga0070762_108491981	3300005602	Soil	KLPEPDMTLERELVAVSRLIRDVGEALESVAETLADGVVEESELRATIPKLEAVIQECASLKYLLEDLSKKRKKKTKQR*
Ga0070764_109624961	3300005712	Soil	AFKLPEPDITLERELVAVSHLIREVGEALESVAETLADGVVEESELRLTIPKLEAVIQECASLKYLLEDLCKKRKKKTKNQR*
Ga0070717_103784861	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GRVAFKLPDPHVTLEKQLVAISNLIKEVGEALESVAETLADGVVEENEVKATIPKLEGVIQECASLKYVLEDLCKKSRKKRKNWPARTR*
Ga0066652_1006184323	3300006046	Soil	PDPNITLERELRAISNLIKEVGEALESVAETLADGLVEETELKTTIPKLEAVIQECASLKYVLENLYKKRRKKVRT*
Ga0075015_1005906962	3300006102	Watersheds	AGRVAFKLPEPNITLEKELVAVSHLIKEVGEALESVAETLADGIVEENELRITIPKLEAVIQECASLKYLLEDLCKKRKKKTRG*
Ga0075015_1007843231	3300006102	Watersheds	FKLPDPHATLEKELVAISNLIKEVGEALESVAETLADGVVEENELKVTIPKLEGVIQECASLKYVLEDLCKKRKKKTKS*
Ga0075014_1000555903	3300006174	Watersheds	LIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKRKKTR
Ga0075014_1008426822	3300006174	Watersheds	AISNLIKEVGEALESVAETLADGVVEENELKATIPKLEGVIQECASLKYVLEDLCKRSKRKTKNGLAGTR*
Ga0070765_1004913981	3300006176	Soil	VSRLIREVGEALESVAETLADGIVEESELRTTIPKIEAVIQECASLRYLLEDLSKKQKKRKKG*
Ga0066659_107861482	3300006797	Soil	PEPHITLEKELVAVSHLIKEVGEALESVAGTLADGVVEDNELRRTMPKIEAVIQECASLKYLLEDLCTKRKKKSRADRTVSR*
Ga0066659_117868011	3300006797	Soil	LTSEKELLAVSNLLREVGVALESVAETLADGTVEEGELRTTIPKLDAVIQECASLKYLLEDLCKKKKKKLKR*
Ga0075434_1007940932	3300006871	Populus Rhizosphere	LIKEVGEALESVAGTLADGIVEDNELRRTIPKIEAVIQECASPKYLLEDLCAKRKKKSKPERAFSK*
Ga0073928_101101893	3300006893	Iron-Sulfur Acid Spring	FKIPDTHLSSGKEILAVSGLLREVGEALASVAATLADGNVEEGELRETVPRLEGVIQECASLKYLLEELCKKKRKKTKR*
Ga0075436_1000205904	3300006914	Populus Rhizosphere	IAFKIPDPNVTLEKELRAISNLIKEVGEALESVAETLADGLVEEPELKATIPKLEAVIQECASLKYVLEDLYKRRKKKART*
Ga0105243_123022991	3300009148	Miscanthus Rhizosphere	RLTSEKELLAVSNLLKEVGEALESVAETLGDGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR*
Ga0105248_100304831	3300009177	Switchgrass Rhizosphere	KELVAVSNLIREVGEALESVAVTIADGVVNEPELKVTIPRIEAVIQECASLKYLLEDLCRKRKKKSSGEHSRPR*
Ga0116133_12206202	3300009623	Peatland	DPDVTLERELVAVSHLIREVGEALESVAETLADGIVEESELRITIPKLEAVIQECASLKYLLEDLSKKRKKKTRNQR*
Ga0126380_107522133	3300010043	Tropical Forest Soil	LPKPDVNLEEELLAVSNLIREVGEALESVGETLADGIVEDKELKVTIPKLEAVIRECAGLKYLLEELSTQRKKKKTRDHSNR*
Ga0134067_103971772	3300010321	Grasslands Soil	VGEALESVAGTLADGVVEDNELRRTIPKIEAVIQECASLKYLLEDLCTKRKKKSRADRTVSR*
Ga0074044_105435002	3300010343	Bog Forest Soil	PDPKMTLEKELLAVSNLIREVGEALESVAETLADGIVEESELRSTVPKLEGVIQECASLKYLLEDLSKRRKKRTRNQ*
Ga0074044_108025421	3300010343	Bog Forest Soil	TLERELVAVSHLIREVGEALESVAETLADGVVEDSELRMTIPKLEAVIQECASLKYLLEDLSKKRKKKTKNQR*
Ga0126378_103828773	3300010361	Tropical Forest Soil	AFKLPRPDTNLEKELVAISNLIREVGEALESVGNTLADGVVEERELQITIPKLEAVIRECAYLKYLLEDLSKKRKKKSR*
Ga0126379_130931811	3300010366	Tropical Forest Soil	MAAVSNLIREVGDALESVGETLADGIVEERELRLTIPKLEAVIRETASLKYLLEELAKRKKKGKAR*
Ga0126381_1001575141	3300010376	Tropical Forest Soil	AGRVAFKLPKLEVSLEKELIAVSNLIREVGEALESVGETLADGVVEEKELQVTIPKLEAVIRECASLKYLLEELSAQRKKKKPR*
Ga0126381_1048567731	3300010376	Tropical Forest Soil	REAGRVAFKLPQPDTTLEKELVAISNLIREVGEALQTVGDTLADGIVEDKELQVTIPKLEAVIRECAYLKYLLEELSKKRKKRVR*
Ga0126383_104576191	3300010398	Tropical Forest Soil	QAGRVAFKLPKPDIDLEKEMSAVSTLIREVGEALESVGETLADGVVEDRELKVTIPKLEAVIRETASLKYLLEELSKRKKKPAKSR*
Ga0137776_12561621	3300010937	Sediment	AVSTLIREVGEALESVGETLADGVVEERELKVTIPKLEAVIRETASLKYLLEELSKRKKKPAKSR*
Ga0137392_112347651	3300011269	Vadose Zone Soil	MSLWSGNLSRCPNPIKEVEEALKCVAESLADGVVEKNELRTTIPKLEAFIQECASLKYLLEDLCKKREKKTKR*
Ga0137391_100105467	3300011270	Vadose Zone Soil	ERELVAVSHLIREVGEALESVAETLADGIVEESELRITIPRLEAVIQECASLKYLLEDLSKKRKKKTKNQL*
Ga0137393_105532871	3300011271	Vadose Zone Soil	SEKELLAVSHLIREVGEALESVAETIADGTIEESELKTTIPKIEAVIQECASLKYLLEDLGRKKKGKRKADRSNTR*
Ga0137393_111116142	3300011271	Vadose Zone Soil	MSNPIKEVGEALKCVAESLADGVVEKNELRTTIPKLEAVIQEYASLKYLLEELCKKREKETKR*
Ga0137363_117396561	3300012202	Vadose Zone Soil	GRVAFKLPSANITLEQELVAVSRLIREVGEALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLSKKRKRKTKNHL*
Ga0137379_115223432	3300012209	Vadose Zone Soil	SHLIKEVGEALEVGAGTLADGVVEDNELRRTIPKIEAVIQECASLKYLLEDLCTKRKKKSTADRTVSGN*
Ga0137367_104917771	3300012353	Vadose Zone Soil	RVAFKLPEPNITLEQELVAVSHLIREVGEALESVAETLADGTVEENELRTTIPKLEAVIQECASLKYLLEDLCKKRKQKRRKL*
Ga0137390_103410023	3300012363	Vadose Zone Soil	VTLEKQLVAISNLIKEVGEALESVAETLADGVVEENELKATIPKLEGVIQECASLKYVLEDLCKKSRKKRKNWPARTR*
Ga0137390_117649831	3300012363	Vadose Zone Soil	MPNPIKEVGEALKCVAESLADGVVEKNELRTTIPKLEAVIQEYASLKYLLEELCKKREKETKR*
Ga0137373_101589891	3300012532	Vadose Zone Soil	ELLAVSHLIREVGEALESVAETIADGTIEEGELKTTIPKIEAVIQECASLRYLLEDLCRKKKGKRKPDRIASR*
Ga0126369_100322326	3300012971	Tropical Forest Soil	NLEEELAAVSNLIKEVGEALESVGETLADGVVEDRELKVTIPKLEAVIRECAALKYLLEELAAQRKKKKKTRDHANR*
Ga0182018_104346482	3300014489	Palsa	RELVAVSHLIREVGEALESVAETLADGVVEESELRTTIPKLEAVIQECASLKYLLEDLSKKRKKKSKNQR*
Ga0137412_110795971	3300015242	Vadose Zone Soil	LPAPHVTLEKQLVAISNLIKEVGEALESVAETLADGVVEESELRATIPKLEGVIQECASLKYVLEGLCKKRKTKTRS*
Ga0182039_105519902	3300016422	Soil	SEREIVAVSHLLREVGEAVESIAATLADGIVEESELRLTVPKLENVIQECASLKYLLEDLCKKRRKKMGR
Ga0182039_117103441	3300016422	Soil	NLEEELLAVSNLIKEVGEALESVGETLADGVVEEKELQVTIPKLEAVIRECATLKYLLEELSAQRKKKKPR
Ga0182038_114436532	3300016445	Soil	VSEREIVAVSHLLREVGEAVESIAATLADGIVEESELRLTVPKLENVIQECASLKYLLEDLCKKRRKKMGR
Ga0187814_103065141	3300017932	Freshwater Sediment	KLVSEKEIVAVSHLLKEVGEAVESIAATLADGIVEESELRVTVPKLESVIQECASLKYLLEDLCKKASKKKTRR
Ga0187801_100668922	3300017933	Freshwater Sediment	APDNTLEKELVAVSNLIREVGEALESVGDTLADGVVEESELKTTIPKLEAVIRECATLKYLLEELSLKRKKKKQR
Ga0187801_103786011	3300017933	Freshwater Sediment	VAFKLPEPNITLERELVAVSHLIREVGEALESVAETLADGIVEEKELRTTIPKLDAVIQECASLKYLLEDLCKKRKKRTKG
Ga0187803_101884381	3300017934	Freshwater Sediment	VAFQLPEPDITLEKELVAVSHLIKEVGEALESVAETLADGVVEESELRTTIPKLEAVIQECASLKYLLEDLCKKRKKKT
Ga0187803_102376081	3300017934	Freshwater Sediment	ELVAISNLIKEVGEALESVGETLADGVVEESELKTTIPKLEAVIRECASLKYLLEDLCKKRKKKKAL
Ga0187819_104161621	3300017943	Freshwater Sediment	KAGRVAFKLPDPHATVEKELVAVSHLIKEVVEALESVAETLADGVVEENELKATIPKLEGVIQECASLRYVLEDLCKKRKKRTKI
Ga0187817_101777522	3300017955	Freshwater Sediment	IREVGEALESVGDTLADGVVEESELKTTIPKLEAVIRECATLKYLLEELSLKRKKKKQR
Ga0187817_102595962	3300017955	Freshwater Sediment	VAFKLPEPNITLERELVAVSHLIREVGEALESVAETLADGIVEENELRITIPKLEAVIQECASLKYLLEDLCKKRKKKTKG
Ga0187781_103654232	3300017972	Tropical Peatland	LIREVGEALESVGETLADGVVEEKELQTTIPKLEAVIRECAYLKYLLEDLSKKRKKKSR
Ga0187782_107526411	3300017975	Tropical Peatland	KLPEPNLTLEKELVAVSHLIRDVGEALESVAETLADGIVEEAELRTTIPKLEAVIQECASLKYLLEELCKKKTKTRKTKR
Ga0187804_100702634	3300018006	Freshwater Sediment	VSNLLREVGEAVESIAGTLADGIVEESELKVTVPRLERVIQECASLKYLLEDLCKKGKRKVRR
Ga0187804_105924551	3300018006	Freshwater Sediment	AGRVAFKLPEPNITLERELVAVSHLIREVGEALESVAETLADGIVEENELRITIPKLEAVIQECASLKYLLEDLCKKRKKKTKG
Ga0187769_103515231	3300018086	Tropical Peatland	LPDSKLISDKEIVAVSNLLKEVGEAVESIAATLADGVVEESELKVTVPRLERVIQECASLKYLLEDLCKKGKRKVKR
Ga0187769_115568191	3300018086	Tropical Peatland	KEIVAVSNLLKEVGEAVESIAATLADGVVEESELKITVPRLERVIQECASLKYLLEDLCKKGKKKARR
Ga0066669_104896873	3300018482	Grasslands Soil	PEPHITLEKELVAVSHLIKEVGEALESVAGTLADGIVEDIELRRTIPKIEAVIQECASLKYLLEDLCTKRKKKSRADRTVSR
Ga0182022_10701063	3300019785	Fen	VAFKLPEPDITLEKELVAVSHLIREVGEALESVAETLADGIVEEGELRTTIPKLEAVIQECASLKYLLEDLSKKRKKKTKNQL
Ga0210403_111093111	3300020580	Soil	VVSRLIREVGEALESVAETLADGIVEESELRTTVPKLEAVIQECASLKYLLEDLSKKRKKKPKNHL
Ga0210401_115693672	3300020583	Soil	QAGRVAFKLPNPKITLDQELIAVSRLIREVGEALESVAETLADGIVEESELRTTIPKIEAVIQECASLKYLLEDLSKKQKKRKKG
Ga0210406_103877013	3300021168	Soil	VAVSHLIREVGEALESVAETLADGVVEENELRTTIPKLEAVIQECASLKYLLEDLSKKRKKKTKNQG
Ga0210388_101586111	3300021181	Soil	FKLPDPDMTLQREVVAVSRLIREVGEALESVAETLADGVVEESELRTTIPKIEAVIQECASLKYLLEDLCKKKKKKTKGGRE
Ga0210383_111036011	3300021407	Soil	PEPHITAERELVAVSHLIREVGEALESVAETLADGVVEESELRTTIPKLEAVIQECASLKYLLEDLCKKRKKKTKNPG
Ga0210383_115495021	3300021407	Soil	AFKIPDSRIASGGELLAVSSLLREVGEALESVAATLADGNVEESELRETVPRLEGVIQECASLKYLLEDLCKKKKKKTKR
Ga0210409_103383234	3300021559	Soil	KELVAVSNLIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKRSR
Ga0210409_107414842	3300021559	Soil	LVAVSHLIREVGEALESVAQTLADGVVEENELRTTIPKLEAVIQECASLKYLLEDLSKRRKKKTKNQG
Ga0213853_113620811	3300021861	Watersheds	SNLIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKKSR
Ga0242666_10518363	3300022721	Soil	PDPKMTLEKELLAVSNLIREVGEALESVAETLADGIVEESELRSTVPKLEGVIQECASLKYLLEDLSKRRKKRTRNQ
Ga0247670_10998111	3300024283	Soil	EKELLAVSNLLKEVGEALESVAETLADGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR
Ga0209171_100693021	3300025320	Iron-Sulfur Acid Spring	KEILAVSGLLREVGEALASVAATLADGNVEEGELRETVPRLEGVIQECASLKYLLEELCKKKRKKTKR
Ga0207699_112828792	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ELLAVSNLLREVGEALESVAETLADGTVEEGELRVTVPKLEAVIQECASLKYLLEDLCKKKKKKPKH
Ga0207652_116143551	3300025921	Corn Rhizosphere	LVAVSNLIREVGEALESVAVTIADGVVNEPELKVTIPRIEAVIQECASLKYLLEDLCRKRKKKSSGEHSRPR
Ga0207709_116103221	3300025935	Miscanthus Rhizosphere	LLKEVGEALESVAETLADGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR
Ga0207648_109577691	3300026089	Miscanthus Rhizosphere	RLTSEKELLAVSNLLKEVGEALESVAETLADGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR
Ga0209055_10166646	3300026309	Soil	ISNLIREVGEALESVADTLADGVVEEKELRETVPKLEAVIQECASLKYLLEEIYKRRKKKEKK
Ga0209761_10963063	3300026313	Grasslands Soil	KIPDPNITLERELRAISNLIKEVGEALESVAETLADGLVEETELKTTIPKLEAVIQECASLKYVLENLYKKRRKKVRT
Ga0209577_106501511	3300026552	Soil	SANITLEQELVAVSRLIREVGEALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLSKKRKRKTKNHL
Ga0208730_10422121	3300027047	Forest Soil	KLPKLDVNLGKELVAVSNLIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKRSR
Ga0208365_10468412	3300027070	Forest Soil	KLPEPDMTLERELVAVSHLIREVGEALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLSKKQKKKPKSRR
Ga0208366_10066303	3300027073	Forest Soil	NLGKELVAVSNLIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKRSR
Ga0208098_10335662	3300027172	Forest Soil	LIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKRSR
Ga0209115_10196883	3300027567	Forest Soil	QAGRVAFKLPRPDASLERELVAISKLIRQVGDALESVGETLADGVVEEKELRATVPKLESVIRECAALKYLLEDLAKRGKKKR
Ga0208565_10119723	3300027662	Peatlands Soil	WRGSCAVSHLIREVGEALESVAETLADGIVEENELRITIPKLEAVIQECASLKYLLEDLCKKRKKKTKG
Ga0209011_10154583	3300027678	Forest Soil	LVAVSHLIREVGEALESVAETLADGVVEENELRTTIPKLEAVIQECASLKYLLEDLSKKRKKKTKNQR
Ga0209274_100088097	3300027853	Soil	KLPRPDASLEKELVAISKLIRQVGDALESVGETLADGVVEEKELRATVPKLESVIRECAALKYLLEDLAKRGKKKR
Ga0209465_103205411	3300027874	Tropical Forest Soil	LPKIDVNLEEELAAVSNLIKEVGEALESVGETLADGVVEDRELKVTIPKLEAVIRECAALKYLLEELAAQRKKKKKTRDHANR
Ga0209275_104573991	3300027884	Soil	RPDASLEKELVAISKLIRQVGDALESVGETLADGVVEEKELRATVPKLESVIRECAALKYLLEDLAKRGKKKR
Ga0209275_107507031	3300027884	Soil	LIREVGEALESVAETLADGVVEESELRTTIPKIEAVIQECASLKYLLEDLCKKKKKKTKGGRE
Ga0209067_109539751	3300027898	Watersheds	TVEKELLAISNLIKEVGEALESVAETLADGVVEESELKATIPKLEGVIQECASLKYVLEDLCKKRKKKMKS
Ga0209168_100018246	3300027986	Surface Soil	MCSSAQQEFAAVTSHIREVGEALEGIGEIFADDVVEERDLRITIPKLEAVIRECASLKYLLEDLALKKNKKKNR
Ga0268266_108756612	3300028379	Switchgrass Rhizosphere	PDSRLTSEKELLAVSNLLKEVGEALESVAETLADGTVEEGELKVTIPKLEGVIQECASLKYLLEDLCKRKKKKLRR
Ga0137415_111267852	3300028536	Vadose Zone Soil	LIREVGEALESVAETIADGTIEESELKTTIPKIDAVIQECASLKYLLEDLCTKKKGKRKADRITSR
Ga0265338_109138771	3300028800	Rhizosphere	VAFKIPDPQLATGKEILAVSSLSKEVGETLASVAATLADGDVDECELKESVPRLEGVIQECASLKYLLEKLCKKRKKKTKR
Ga0302182_102929092	3300030054	Palsa	RVAFKLPDPRLPIEKELAAVSRLIRDVGAALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLAKKRKKKTKS
Ga0302176_101303802	3300030057	Palsa	VAFKLPEPDITLERQLVAVSHLIREVGEALESVAETLADGVVEESELRTTIPKLEAVIQECASLKYLLEDLGRKRKKKTRQR
Ga0302176_103073881	3300030057	Palsa	RLPIEKELAAVSRLIRDVGAALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLAKKRKKKTKS
Ga0265762_10516311	3300030760	Soil	QELVAVSRLIREVGEALESVAETLADGIVEESELRTTIPKLEAVIQECASLKYLLEDLSKKGKKKTKNQR
Ga0265741_1056831	3300030814	Soil	AISNLIREVGEALESVAETLADGIVEESELRSTVPKLEGVIQECASLKYLLEDLSKRRKKRTRNQ
Ga0265770_11540962	3300030878	Soil	PKMTLEKELLAISNLIREVGEALESVAETLADGVVEESELRSTVPKLEGVIQECASLKNLLEDLSKRRKKRTRNP
Ga0073994_100708862	3300030991	Soil	LPEPDITPERELVAVSHLIREVGEALESVAETLADGVVEENELRTTIPKLEAVIQECASLKYLLEDLSKKRKKKTKTQR
Ga0302325_106744553	3300031234	Palsa	EKELLAVSHLIREVGEALESVAETLADGIVEESELRSTVPKLEGVIQECASLKYLLEDLSKRRKKRTRNQ
Ga0307469_123498901	3300031720	Hardwood Forest Soil	KLPAPNITLEKERVAVSHLIREVGEALESVAETLADGIVEENELRTTIPKLEAVIQECASLKYLLEDLCRKRKKKTKRQP
Ga0306918_107061642	3300031744	Soil	AFRLPDSKLVSEKEIVAVSNLLKEVGEAVESIATTLADGVVEESELKVTVPKLERVIQECASLKYLLEDLSKKSKKKARR
Ga0307478_110281001	3300031823	Hardwood Forest Soil	AFKLPEPHLTLEKELVAVSHLIREVGEAIESVAETLADGIVEENELRTTIPKIEAVIQECASLKYLLEDHCKNRKKKPKH
Ga0306925_121782001	3300031890	Soil	AAVSNLIKEVGEALESVGETLADGVVEDRELKVTIPKLEAVIRECAALKYLLEELAAQRKKKKTRDHANR
Ga0306924_102963163	3300032076	Soil	EIVAVSHLLREVGEAVESIAATLADGIVEESELRLTVPKLENVIQECASLKYLLEDLCKKRRKKMGR
Ga0307472_1009475741	3300032205	Hardwood Forest Soil	LVAVSNLIREVGEALESVGETLADGVVEDKELQTTIPKLEAVIRECASLKYLLEELSAQRKKKKWR
Ga0306920_1012944721	3300032261	Soil	RQAGRVAFKLPKLDVKLDKELIAVSNLIREVGDALESVGETLADGVVEEKELQVTIPKLEAVIRECASLKYLLEELSAQRKKKKSR
Ga0335079_110270132	3300032783	Soil	GRVAFKLPDAHVTVEKELVAISHLIKEVGEALESVAETLADGVVEENELKATIPKLEGVIQECASLKYVLEDLCKKRKKKIKNWPAGQR
Ga0335079_111766033	3300032783	Soil	GRVAFKLPAPETALEKELVAISNLIKEVGEALESVAETLADGIVEENELKTTIPKLEAVIRECASLKYLLEDLCKGRKKKKVPRV
Ga0335081_104663411	3300032892	Soil	HLIKEVGEALESVAETLADGVVEENELKATIPKLEGVIQECASLKYVLEDLCKKRKKKIKNWPAGQR
Ga0335076_105585291	3300032955	Soil	AVSNLIREVGEALEQVGETLADGVVEERELRVTIPKLEAVIRETASLKYLLEELAKQKRRKKTR
Ga0335084_113023882	3300033004	Soil	ELAAVTNLIRDVGEALESVGETLADGVVEDRELQTTIPKLEAVIRECASLKYLLEELAAQRKKKKGR
Ga0310914_116282001	3300033289	Soil	RVAFRIPESHPTSDKEILAVFSLLKEVGEALESVAATLSDGNVEESELRITVSKLEGVIQECASLKYLVAGELLFHP
Ga0310810_100564774	3300033412	Soil	LRFLTLSKEVGEALECVAETLADGVVEENELKATIPKLEDVIQECASLKYVLEDLCKKRKKKTNSRPAGKH
Ga0316628_1004327801	3300033513	Soil	QAGRVAFKLPDPHLTLEKELVAISNLIREVGEALESVAETLADGVVEENELKATIPKLEGVIQECASLKYVLEDLCKKKKKRTKS
Ga0316214_10709851	3300033545	Roots	FKLPEPDMTLERELVAVSHLIREVGEALESVAQTLADGVVEQSELRETIPKLEAVIQECASLKYLLEDLSKKGKKKTKNQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057597

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences