Metagenome / Metatranscriptome Family F057542

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057542
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	81 residues
Representative Sequence	MASPQDGSPEASYDPMAQFAELAGDVRDPYPMFAGIRADTPVLHVELGAGSRYRHDEKAPRITSLFTVTSHELAQQVLTDNARF
Number of Associated Samples	109
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.03 %
% of genes near scaffold ends (potentially truncated)	97.79 %
% of genes from short scaffolds (< 2000 bps)	96.32 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.765 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (38.971 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.618 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.21% β-sheet: 0.00% Coil/Unstructured: 76.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00106	adh_short	21.32
PF06271	RDD	4.41
PF12802	MarR_2	2.94
PF08281	Sigma70_r4_2	2.21
PF01872	RibD_C	2.21
PF00933	Glyco_hydro_3	2.21
PF08241	Methyltransf_11	1.47
PF07730	HisKA_3	1.47
PF04149	DUF397	0.74
PF00196	GerE	0.74
PF02909	TetR_C_1	0.74
PF00583	Acetyltransf_1	0.74
PF04075	F420H2_quin_red	0.74
PF03055	RPE65	0.74
PF08940	DUF1918	0.74
PF00067	p450	0.74
PF13450	NAD_binding_8	0.74
PF04679	DNA_ligase_A_C	0.74
PF13649	Methyltransf_25	0.74
PF12697	Abhydrolase_6	0.74
PF07690	MFS_1	0.74
PF00132	Hexapep	0.74
PF04545	Sigma70_r4	0.74
PF01810	LysE	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	4.41
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	2.21
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	2.21
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	2.21
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	1.47
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	1.47
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	1.47
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	1.47
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.74
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.74
COG2124	Cytochrome P450	Defense mechanisms [V]	0.74
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.76 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.76 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.76 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.06 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.06 %
Unclassified	root	N/A	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.62 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	5.15 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.94 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.21 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	2.21 %
Acidothermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales	0.74 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.74 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	5.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2.21 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.21 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.74 %
Acidothermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae	0.74 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.74 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.21 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.47 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.74 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.74 %
Phytohabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans	0.74 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.74 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.74 %
Acidothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Actinomadura alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura alba	1.47 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1.47 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.74 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.74 %
Candidatus Frankia datiscae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	0.74 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.74 %
Mycolicibacterium gilvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum	0.74 %
Acidothermus cellulolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	0.74 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.94 %
Actinomadura alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura alba	1.47 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1.47 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	0.74 %
Phytohabitans rumicis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	0.74 %
Candidatus Frankia datiscae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	0.74 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.74 %
Mycolicibacterium gilvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum	0.74 %
Acidothermus cellulolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	0.74 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001452\|JGI20203J14952_1017192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium gilvum	794	Open in IMG/M
3300001867\|JGI12627J18819_10096332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1223	Open in IMG/M
3300002914\|JGI25617J43924_10221310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300004635\|Ga0062388_102597799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	532	Open in IMG/M
3300005146\|Ga0066817_1026290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300005341\|Ga0070691_11022598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300005471\|Ga0070698_101311803	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300005538\|Ga0070731_10347564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300005560\|Ga0066670_10524390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	726	Open in IMG/M
3300005602\|Ga0070762_10616512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	722	Open in IMG/M
3300005610\|Ga0070763_10967767	Not Available	509	Open in IMG/M
3300005764\|Ga0066903_107961220	Not Available	544	Open in IMG/M
3300006028\|Ga0070717_11112159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300006050\|Ga0075028_100282804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300006052\|Ga0075029_101181614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300006176\|Ga0070765_100264021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1582	Open in IMG/M
3300006176\|Ga0070765_100430926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1234	Open in IMG/M
3300006354\|Ga0075021_10487431	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300010046\|Ga0126384_11662504	Not Available	603	Open in IMG/M
3300010048\|Ga0126373_11249161	Not Available	809	Open in IMG/M
3300010366\|Ga0126379_12557230	Not Available	609	Open in IMG/M
3300010376\|Ga0126381_100473452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1761	Open in IMG/M
3300010399\|Ga0134127_13332608	Not Available	526	Open in IMG/M
3300010876\|Ga0126361_10731202	Not Available	569	Open in IMG/M
3300010880\|Ga0126350_11917705	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300011271\|Ga0137393_11106789	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012351\|Ga0137386_10030887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3650	Open in IMG/M
3300012351\|Ga0137386_11297181	Not Available	505	Open in IMG/M
3300012359\|Ga0137385_11518892	Not Available	533	Open in IMG/M
3300012363\|Ga0137390_10465083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300016270\|Ga0182036_10990804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	692	Open in IMG/M
3300016294\|Ga0182041_11964745	Not Available	544	Open in IMG/M
3300016319\|Ga0182033_10176817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300016319\|Ga0182033_11478924	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300016341\|Ga0182035_10663840	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300016357\|Ga0182032_10121120	Not Available	1887	Open in IMG/M
3300016357\|Ga0182032_11101742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300016371\|Ga0182034_10655109	Not Available	890	Open in IMG/M
3300016387\|Ga0182040_11314400	Not Available	611	Open in IMG/M
3300016387\|Ga0182040_11333440	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300016387\|Ga0182040_11717230	Not Available	536	Open in IMG/M
3300016404\|Ga0182037_10101098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2076	Open in IMG/M
3300016404\|Ga0182037_10512769	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300016422\|Ga0182039_12116893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	518	Open in IMG/M
3300016445\|Ga0182038_10090297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2193	Open in IMG/M
3300016445\|Ga0182038_10836684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300017821\|Ga0187812_1156802	Not Available	732	Open in IMG/M
3300017928\|Ga0187806_1279673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300017942\|Ga0187808_10093348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1305	Open in IMG/M
3300017942\|Ga0187808_10285305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300017942\|Ga0187808_10572861	Not Available	525	Open in IMG/M
3300017959\|Ga0187779_10379553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300017966\|Ga0187776_10588295	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300017970\|Ga0187783_11009958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Phytohabitans → Phytohabitans rumicis	599	Open in IMG/M
3300017974\|Ga0187777_10506054	Not Available	844	Open in IMG/M
3300018001\|Ga0187815_10078688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1385	Open in IMG/M
3300018085\|Ga0187772_10644349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300020580\|Ga0210403_11309546	Not Available	553	Open in IMG/M
3300020581\|Ga0210399_10675590	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300020582\|Ga0210395_10513547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300020583\|Ga0210401_10809627	Not Available	796	Open in IMG/M
3300020583\|Ga0210401_10913900	Not Available	736	Open in IMG/M
3300021171\|Ga0210405_11338946	Not Available	524	Open in IMG/M
3300021402\|Ga0210385_10172354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1560	Open in IMG/M
3300021403\|Ga0210397_10231724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	1333	Open in IMG/M
3300021403\|Ga0210397_10640063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura alba	814	Open in IMG/M
3300021403\|Ga0210397_10647980	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300021403\|Ga0210397_10920978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300021405\|Ga0210387_10379725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1251	Open in IMG/M
3300021406\|Ga0210386_10679556	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300021479\|Ga0210410_10284282	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300021479\|Ga0210410_11127866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300025634\|Ga0208589_1027861	Not Available	1559	Open in IMG/M
3300027050\|Ga0209325_1046699	Not Available	524	Open in IMG/M
3300027696\|Ga0208696_1179758	Not Available	676	Open in IMG/M
3300027867\|Ga0209167_10532110	Not Available	644	Open in IMG/M
3300027884\|Ga0209275_10268976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300027889\|Ga0209380_10155030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1339	Open in IMG/M
3300027889\|Ga0209380_10471070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300027894\|Ga0209068_10687063	Not Available	599	Open in IMG/M
3300027903\|Ga0209488_10315258	Not Available	1166	Open in IMG/M
3300027905\|Ga0209415_11079538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300028806\|Ga0302221_10263495	Not Available	752	Open in IMG/M
3300028906\|Ga0308309_10140060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1933	Open in IMG/M
3300028906\|Ga0308309_11163013	Not Available	666	Open in IMG/M
3300030503\|Ga0311370_11435236	Not Available	727	Open in IMG/M
3300030524\|Ga0311357_10863517	Not Available	807	Open in IMG/M
3300030836\|Ga0265767_113783	Not Available	570	Open in IMG/M
3300031170\|Ga0307498_10028283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300031544\|Ga0318534_10618529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300031544\|Ga0318534_10741885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	553	Open in IMG/M
3300031545\|Ga0318541_10309192	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031546\|Ga0318538_10293504	Not Available	876	Open in IMG/M
3300031549\|Ga0318571_10190307	Not Available	729	Open in IMG/M
3300031668\|Ga0318542_10198434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300031679\|Ga0318561_10180796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1140	Open in IMG/M
3300031679\|Ga0318561_10648651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300031679\|Ga0318561_10782625	Not Available	524	Open in IMG/M
3300031681\|Ga0318572_10199881	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300031708\|Ga0310686_103984662	Not Available	611	Open in IMG/M
3300031708\|Ga0310686_112421914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura alba	855	Open in IMG/M
3300031718\|Ga0307474_10821063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300031723\|Ga0318493_10334283	Not Available	822	Open in IMG/M
3300031768\|Ga0318509_10375965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	795	Open in IMG/M
3300031777\|Ga0318543_10342129	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031778\|Ga0318498_10007262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4314	Open in IMG/M
3300031781\|Ga0318547_10376187	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031781\|Ga0318547_11080356	Not Available	502	Open in IMG/M
3300031782\|Ga0318552_10299167	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300031782\|Ga0318552_10419643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	682	Open in IMG/M
3300031795\|Ga0318557_10234739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	839	Open in IMG/M
3300031797\|Ga0318550_10633765	Not Available	513	Open in IMG/M
3300031798\|Ga0318523_10114287	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300031819\|Ga0318568_10466727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300031823\|Ga0307478_10563412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	952	Open in IMG/M
3300031846\|Ga0318512_10349471	Not Available	739	Open in IMG/M
3300031846\|Ga0318512_10654023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	537	Open in IMG/M
3300031879\|Ga0306919_10871146	Not Available	691	Open in IMG/M
3300031910\|Ga0306923_10932988	Not Available	948	Open in IMG/M
3300031954\|Ga0306926_10019251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7812	Open in IMG/M
3300031954\|Ga0306926_11209762	Not Available	887	Open in IMG/M
3300032009\|Ga0318563_10201799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1072	Open in IMG/M
3300032010\|Ga0318569_10160602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1036	Open in IMG/M
3300032044\|Ga0318558_10465223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300032066\|Ga0318514_10728584	Not Available	527	Open in IMG/M
3300032076\|Ga0306924_11664329	Not Available	670	Open in IMG/M
3300032076\|Ga0306924_12240493	Not Available	556	Open in IMG/M
3300032091\|Ga0318577_10293256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	778	Open in IMG/M
3300032180\|Ga0307471_103374452	Not Available	566	Open in IMG/M
3300032261\|Ga0306920_102258703	Not Available	755	Open in IMG/M
3300032261\|Ga0306920_103515133	Not Available	579	Open in IMG/M
3300032782\|Ga0335082_10361650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1318	Open in IMG/M
3300032783\|Ga0335079_10428555	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300032805\|Ga0335078_11782891	Not Available	670	Open in IMG/M
3300032954\|Ga0335083_11450094	Not Available	523	Open in IMG/M
3300034124\|Ga0370483_0147040	Not Available	791	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.91%
Aquatic	Environmental → Aquatic	8.09%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.71%
Freshwater	Environmental → Aquatic → Freshwater	5.15%
Sediment	Environmental → Aquatic → Sediment	2.94%
Peat	Environmental → Terrestrial → Peat	2.21%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.32%
Loam	Environmental → Terrestrial → Soil → Loam	11.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.21%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.21%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.21%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.41%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.21%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.47%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.47%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.47%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20203J14952_10171921	3300001452	Arctic Peat Soil	LARTPGRDGSPEARYDPMRQFAELAGDVRDPYPMLAGIRADNPVLRVDFAPPSGRGSRLDPKAPRLPSVFTVTSHELAQRVLTDSVRF
JGI12627J18819_100963323	3300001867	Forest Soil	MVSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVQLSTGPGGRYQHDERAPRITSLFTITSHELAQ
JGI25617J43924_102213101	3300002914	Grasslands Soil	MPGRDDAPAASYDPMRQFAELAGDIRDPYPMLAGIRADSPVLXVDFGXASGGSYRHDEKAPRITSLFTVTSHDLAQQVLTDNARFSSAGYASTIGQVM
Ga0062388_1025977991	3300004635	Bog Forest Soil	LATAPDPMRQFSELAGDVRDPYPMMAGIRAGSPVLEIHLGTRPGRNRPGEAGPAPTISSLFSVTSYEHAQQVLTDNVRFSS
Ga0066817_10262901	3300005146	Soil	MRQFTELAGDVRDPYPMFAGIRADTPVLHVELGAGSGARYRHDENSPRISSLFTVTSYELAQQVLADNVRF
Ga0070691_110225981	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MDDSSEASYDPMAQFAELAGDVRDPYPMFAGIRADTPVMHVELGPGSGGGRYRHDEKAPRMTSLFTVTSHKLAQQVLTDN
Ga0070698_1013118032	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LVTTPGPDDSAAAGYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGPGSGGRYRYDERAPRITSLFTVTSHELAQQVLTDNV
Ga0070731_103475641	3300005538	Surface Soil	MRQFAELAGDVRDPYPMFAGIRADTPVMEVPFGPGSSGRYHHDEKAPPITSIFTVTSHALAQQVLTDNVRFSSSASAMTTGQVM
Ga0066670_105243901	3300005560	Soil	MSGKGLVTASGEAGYDPMRQFIELAGDVRDPYPMFAGIRAETPVLHVELGGGAGRYRHDEKAPRITSLFTVTSHELAQQVLTDHKRFS
Ga0070762_106165122	3300005602	Soil	MASQQDGSPEASYDPMAQFAELAGDVRDPYPMFAGIRAETPVMHVELGSGGRYRHDEKAPRITSLFTVTSHE
Ga0070763_109677671	3300005610	Soil	LVTTPGADDSAEVSYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEIPFGPGSGSRYHHDEKAPPITSVFTVTSHALAQQVLTDNVRFSS
Ga0066903_1079612202	3300005764	Tropical Forest Soil	MPAGPEEAAYDPMQQFAELAGDVRDPYPMMAGIRAGSPVLEVHLAAGSGRYQHDQRAPAIPTLYSVTSYELAQQVLTDNV
Ga0070717_111121591	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDDSPEASYDPMAQFAELAGDVRDPYPMFAGIRAETQVMHVELGSGGRYQHDEKAPRITSLFTVTSHELAQQVLTDNVRFSSAANAMTIGQVMGR
Ga0075028_1002828041	3300006050	Watersheds	MIMVSEQDGSPGASYDPMRQFAEIAGDVRDPYPMFAGIRADTPVLHVELGGSGSRYRHDEKAPRITSLFTVTSYELARQVLTDNVRFSS
Ga0075029_1011816141	3300006052	Watersheds	MPAGPEDAAYDPMQQFAELAGDVRDPYPMMAGIRAGSPVLEVHLAAGSGRYQHDRKAPDIPTLYSVTSYELVQQVLTDNVRFSSAGYAATIGA
Ga0070765_1002640211	3300006176	Soil	LVTTPGRDDSAAASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGTGSGGGYRRDEKAPRITSLFTVTSH
Ga0070765_1004309263	3300006176	Soil	MASQQDGSPEASYDPMAQFAELAGDVRDPYPMFAGIRAETPVMHVELGSGGSRYRHDEKAPRITSLFTVTSHELAQQVLTDNVRFS
Ga0075021_104874311	3300006354	Watersheds	LVTTPGRDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGPGSGRRSRPDQQAPQMTSLFTIASHEIAQQVLTDSVRFSSAGYATT
Ga0126384_116625041	3300010046	Tropical Forest Soil	MTPERDDSPAAGYDPMRQFAELAGDVRDPYPMFAGIRAETPVLHVELGTGTGVRYRHDEKAPRITSLFTVTEYELAR
Ga0126373_112491612	3300010048	Tropical Forest Soil	LVTTSGPDGSPEVGYDPMRQFAELAGDVRDPYPMFAGIRADTPVLQVHIGSGSGGGAGLDQKAPRVPSIFTVTSYELAQQVLTDNE
Ga0126379_125572302	3300010366	Tropical Forest Soil	MVSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVHLGPGSGGGSQLDRQAPRVTSVFTVTSHELAQQVLTDH*
Ga0126381_1004734522	3300010376	Tropical Forest Soil	MTPERDDSSAAGYDPMRQFAELAGDVRDPYPMFAGIRAETPVLHVELGAGSGGRYRHDEKAPRITSLFTVTEYDLAQQVLTDNARFSSA
Ga0134127_133326082	3300010399	Terrestrial Soil	MDDSSEASYDPMAQFAELAGDVRDPYPMFAGIRADTPVMHVELGTGPGGGRYRHDEKAPRITSLFTVTSHKL
Ga0126361_107312021	3300010876	Boreal Forest Soil	MRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGAGSGGRYQHDERAPRITSLFTVTSHALAQQVLTDNVRFSSAASAMTT
Ga0126350_119177051	3300010880	Boreal Forest Soil	MRQFAELAGDVRDPYPMFAGVRADSPVMEVHLDPSSGDTTRLDRKAPRMTSLFTVVNRELARQVLTDDARFS
Ga0137393_111067892	3300011271	Vadose Zone Soil	MRQFAELAGDVRDPYPMFAGIRAETPVLHVEVGGGSGRYRHDEKAPRITSLFTVTSCELAQQVLTDHERFSSAANA
Ga0137386_100308872	3300012351	Vadose Zone Soil	MVSQQHGSPEAGYDPMRQFAELAGDVRDPYPMFAGIRADTPVLHVELGAGSGARYRHDENAPRISSLFTVTSYELAQQVLTDNVRF*
Ga0137386_112971812	3300012351	Vadose Zone Soil	MPGRDDAPAASYDPMRQFAELAGDIRDPYPMLAGIRADSPVLYVDFGTASGGSYRHDEKAPRITSLFTVTSHDLAQQVLTDN
Ga0137385_115188921	3300012359	Vadose Zone Soil	MASEQDGSPEASYDPMAQFAELAGDVRDPYSMFAGIRADSPVLHVELGAGSGGRYRHDDKAPRISSLFAVTSLELAQQVLTD
Ga0137390_104650833	3300012363	Vadose Zone Soil	LVTASEQDGSPEASYDPMAQFAELAGDVRDPYPMLAGIRADSPVLHVHLGTGSGRYRHDEKAPRITSLYTVS
Ga0182036_109908042	3300016270	Soil	LVTTPGRDDSPAASYDPMRQFAELAGDVRDPYPMFAGIRADSPVLHVHLGTGSGARYEHDPDAPPITSLFAVTSHE
Ga0182041_119647452	3300016294	Soil	LVTTPGRDDSPAAGYDPMRQFAELAGDVRDPYPMMAGIRADSPVLHVQLGTGSGARYRHDQKAPPITSLFTVTSNELAQ
Ga0182033_101768173	3300016319	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVQLSTGPGGRYQHDDKAPRITSLFTITSH
Ga0182033_114789241	3300016319	Soil	MVSRQDGSPEASYDPMAQFAELAGDVRDPYPMMAGIRADSPVMHVQLGTGTGARYRHDEKAPRISSLFTVTSHE
Ga0182035_106638402	3300016341	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHIGSGGGAGLDHKAPRVPTIFTVTSWELAQQVL
Ga0182032_101211203	3300016357	Soil	MASQRDDSPGTSYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVELGGPGSRYRHDEKAPRITSLFTVT
Ga0182032_111017422	3300016357	Soil	VDTTPGRDDSPAASYDPMRQFTELAGDVRDPYPMFAGIRADSPVLHVHLDTGSGARYEHDQNAPPITSLFAVSSHELAQQVLIDNAR
Ga0182034_106551091	3300016371	Soil	MSGPDGSAEAGYDPMRQFSELAGDVRDPYPMFAGIRADTPVLHVQLGPGSGGGSGLRSLFTVTSHQLAQQ
Ga0182040_113144002	3300016387	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHIGSGGGAGLDHKAPRVPTIFTVTSWELAQQVLTDNERF
Ga0182040_113334402	3300016387	Soil	LVTTPGQDDSLASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFRPGSGRRRRQDQQAPRI
Ga0182040_117172302	3300016387	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRAETPVLHVQLSTGPGGRYQHDEQAPRITSLFTITNYELAQ
Ga0182037_101010981	3300016404	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHIGSGGGAGLDHKAPRVPTIFTVTSWELAQQVLTDNERFSSA
Ga0182037_105127693	3300016404	Soil	LVTTPGQDDSLASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGPGSGRRSRPDQQAPRISSLFTVLSHELAQQVLTDNVRFSSA
Ga0182039_121168932	3300016422	Soil	VVTMPGRDDFPAASYDPMRQFTELAGDVRDPYPMFAGIRADSPVLQIHVGPGSGGGSQPDPKAPRVPFLFTVTSH
Ga0182038_100902971	3300016445	Soil	MRQFAELAGDVRDPYPMFAGIRADSPVLHVHLGTGSGARYEHDPDAPPITSLFAVTSHELAQQVLTDNARFSSA
Ga0182038_108366843	3300016445	Soil	VDTTPGRDDSPAASYDPMRQFTELAGDVRAPYPMFAGIRADSPVLHVHLDTGSGARYEHDQNAPPITSLFAVSSH
Ga0187812_11568022	3300017821	Freshwater Sediment	LVTTSGQDDSPSASYDPMLQFAQLAGDVRDPYPMFAGIRADTPVLHVHFGPGSGGGSRPDQQAPRISSLFTVASHELARQVLTDNGGTPATTW
Ga0187806_12796731	3300017928	Freshwater Sediment	VVTSSEQDGSPEGSYDPMWQFAELAGDVRDAYPMLAGIRADSPVLQVHVGPWSSDRSRLDPKTPRATSLFTVTSYELVQQVLTDNVRFSSAGYATTIGQVMGRSI
Ga0187808_100933481	3300017942	Freshwater Sediment	MPDGPEDAAYDPMQQFAELAGDVRDPYPMMAGIRADSPVLEVHLAGSGRYQHDQKAPAIPTLYSVTSYELVQQVLTDN
Ga0187808_102853052	3300017942	Freshwater Sediment	MADRPDGSPEDSYDPMRQFAELAGDVRDPYPMFAGIRAETPVLEVHFGPRSGEGARPEQRAPRMTSLFTVTSHSLAQEV
Ga0187808_105728612	3300017942	Freshwater Sediment	LVTTPGPNDSAAAAYDPMRQFAQLAGDVRDPYPMFAGIRADTPVMEVRFGAGGGGRYQRDEKAPPITSLFTVT
Ga0187779_103795531	3300017959	Tropical Peatland	MPVGHDGPADGGYDPMRQFAELAGDVRDPYPMLAGIRAGSPVLEVHLAAGSGRYRHDEKAPDIPTLYSVTSYELAQQVLTDNVR
Ga0187776_105882951	3300017966	Tropical Peatland	MPGRDESPEASYDPMRQFAELAGDVRDPYPMLAGIRADSPVLHVHLGTGSGARYRHDQKAPPITSLFTVTSHELAQQVLTDSARFSSAGYAMT
Ga0187783_110099582	3300017970	Tropical Peatland	VVTMPGQDESSTASYDPMRQFAELAGDVRDPYPMLAGIRAGSPVLQVQIGPGPDGGSRKDRQAPWISSLFTVTSH
Ga0187777_105060541	3300017974	Tropical Peatland	LVTTPGRDSSPEVSYDPMRQFVELAGDVRDPYPMLAGIRADTPVLEVHFGSGSGARSRPARPGPRMSSLFTVTSHELARQVLTDSARF
Ga0187815_100786881	3300018001	Freshwater Sediment	MSGKGLVTASGEAGYDPMRQFAELAGDVRDPYPMFAGIRAETPVLHVEVGGGSGRYRHDEKAPRITSLFTVTSYELAQQV
Ga0187772_106443491	3300018085	Tropical Peatland	MPVGPEGAADAGYDPMRQFAELAGDVRDPYPMLAGIRAGSPVLEVHLAARSGRYRHDEKAPVIPTLYSVSSYELAEQVLTDNVRF
Ga0210403_113095461	3300020580	Soil	MIMVSEQDGSAEASYDPMRQFAEIAGDVRDPYPMFAGIRADTPVLHVELGGSGSRYRHDEKAPRITSLFTVTGYELARQVLTDNVRFSSAANAM
Ga0210399_106755902	3300020581	Soil	LVTTPGPNDSAEASYDPMRQFAQLAGDVRDPYPMFAGIRADTPVMEIQFGAGYGGRYRRDEKAPPITSLFTVTSHALAQEVLTDN
Ga0210395_105135471	3300020582	Soil	LVTTSGPDDSAAASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVQFGAGAGGRYRRDERAPRITSL
Ga0210401_108096271	3300020583	Soil	LVTTSGPDDSAAASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVQFGAGGGGRYRRDERAPRITSLFTVTSHALAQQVLTDSVRFSSAASAMT
Ga0210401_109139002	3300020583	Soil	LVTTPGPDDSAEASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGAGYGGRYRRDEKAPPITSLFTVTSHALAQEVLTDNV
Ga0210405_113389461	3300021171	Soil	LVTTPGPDDSAEASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGAGYGGRYRRDEKAPPITSLFTVTSHAL
Ga0210385_101723541	3300021402	Soil	LVTTPGRDDPAADSYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGTGSGGRSRHDEKAPPITSLFTVTSHALAQQVLTDNERFS
Ga0210397_102317243	3300021403	Soil	LVTTPGRDDPAADSYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGTGSGGRSRHDEKAPPITSLFTVTSHALAQQVLTDNVRFSSSANA
Ga0210397_106400632	3300021403	Soil	LVTTSGPDDSAAASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVQFGAGGGGRYRRDERAPRITSLFTVTSHAIAQQVLT
Ga0210397_106479801	3300021403	Soil	MASPQDGSPEASYDPMAQFAELAGDVRDPYPMFAGIRADTPVLHVELGAGSRYRHDEKAPRITSLFTVTSHELAQQVLTDNARF
Ga0210397_109209782	3300021403	Soil	LVTTSGPDDSAAASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVQFGAGSGGQYRRDERAPRITSL
Ga0210387_103797251	3300021405	Soil	MAACHVARKETGLARTPGRDGLPEASYDPMRQFAELAGDVRDPYPMFAGIRADTPVLHVELGGSGSRYRHDEQAPRITSLFTVTSYELARQVLTDNVRFSSAANAMTIGP
Ga0210386_106795561	3300021406	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGAGYGGRYRRDEKAPPITSLFTVTSHALAQEVLTD
Ga0210410_102842823	3300021479	Soil	MASPQDGSPEASYDPMAQFAEIAGDVRDPYPMFAGIRAETPVLHVELGAGARYRHDEKAPRITSLFTVTSHQLAQQVLTDNVRFSSAANA
Ga0210410_111278661	3300021479	Soil	LVTTPGADDSAEASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGPGSGSRYHHDEKAPPITSVFTVTT
Ga0208589_10278611	3300025634	Arctic Peat Soil	MSGKGLVTASGEPGYDPMRQFAELAGDVRDPYPMFAGIRAETPVLHVEVGSSPGRYRHDEKAPRITSLFTVTSYELAQQVLGVLQAVADAGKLGIGV
Ga0209325_10466992	3300027050	Forest Soil	MASPQDGAPEASYDPMAQFAELAGDVRDPYPMFAGIRADTPVLHVELGAGSRYRHDEKAPRITSLFTVTGYELARQVLTDNVRF
Ga0208696_11797581	3300027696	Peatlands Soil	MVTASQQDGSPEAPYDPMRQFAELAGDVRDPYPMFAGLRESTPVMEVQYGPGPGRGSGLDPKAPRVPSLFTVTSHDLA
Ga0209167_105321101	3300027867	Surface Soil	MAAQPDGSPEDSYDPMWQFAELAGDVRDPYPMFAGIRADTPVLEVHFGPRSGGGSRADQRAPRMTSLFTVTSHELAQEVLTD
Ga0209275_102689762	3300027884	Soil	LVTAPGQDGSPEDGYDPMRQFAELAGDVRDPYPMFAGIRESTPVMEIQYGARSDPKAPRVTSLFSVTSHELAEQVLTDTARFSS
Ga0209380_101550301	3300027889	Soil	LVTTPGPDDSAAASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGTGSGGRYRRDEKAPPITSLFTVTSHALAQ
Ga0209380_104710701	3300027889	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGTGSGGRSRHDEKAPPITSLFTVTSHALAQQVLTDNVRFSSSANAMTTGQVM
Ga0209068_106870632	3300027894	Watersheds	MAGMSEPGNGAGLVTAPGPEGSPTASYDPMRQFTELAGDVRDPYPMMAGIRAGSPVLKVTLGARPGQYRHHEKAPRITTLFTVTS
Ga0209488_103152582	3300027903	Vadose Zone Soil	LVTAPGRDGPSEASYDPMRQFSELAGDVRDPYPMMAEIRAGSPVLELNMGARPGRYRHDEKAPKIPTLFTVTSHELAQ
Ga0209415_110795381	3300027905	Peatlands Soil	MAAGVDGTPEDSYDPMWQFAELAGDVRDPYPMFAGIRADTPVLQVHFGPRSGGGSRPDQRAPRMTSLFTVTSHELAQ
Ga0302221_102634951	3300028806	Palsa	LVTTSGASYDPMRQFAELAGDIRDPYPMFAGIRADSPVLEVHFDPRPGSRMRLSSLFTVTSHELARQVLTDNVRFSSA
Ga0308309_101400604	3300028906	Soil	LVTTPGADDSAEVSYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEIPFGPGSGSRYHHDEKAPPITSVFTVTTHALAQQ
Ga0308309_111630131	3300028906	Soil	MDDPPEASYDPMAQFAELAGDVRDPYPMFAGIRAETPVMHVELGSGGSRYRHDEKAPRITSLFTVTSHELAQQVLTDNVRFSSA
Ga0311370_114352361	3300030503	Palsa	MSGKGLVTASGEPGYDPMRQFAELAGDVRDPYPMFAGIRAQTPVLHVEVGSRHDEQAPRITSLFTVTSYELAQQVLT
Ga0311357_108635171	3300030524	Palsa	LGTTSDASYDPMRQFAELAGDMRDPYPMFAGIRADSPVLEVHFDPRPGSRMRLSSLFTVTSHELARQVLTDNVRFSSAGYEE
Ga0265767_1137831	3300030836	Soil	MRQFAELAGDVRDPYPMLAGIREDSPVLRVDFGSRSGRRSRLDPKAPRVPSLFTVTSHELAQRVLTDNV
Ga0307498_100282831	3300031170	Soil	MASPQDGSPEASYDPMAQFAELAGDVRDPYPMFAGIRADTPVLHVELGAGSGARYRHDEKAPRISSLFTVTSYELTQQVLT
Ga0318534_106185292	3300031544	Soil	MPAGPEDAAYDPMQQFAELAGDVRDPYPMMAGIRADSPVLEVHLAAGSGRYQHDRKAPAIPTLYSVTSYELV
Ga0318534_107418852	3300031544	Soil	MAPGLEAPAEASYDPMRQFAELAGDVRDPYPMFAEIRAGSPVMQVHQGTQPGRHQPDGKAPKMPP
Ga0318541_103091921	3300031545	Soil	MVSRQDGSPEASYDPMAQFAELAGDVRDPYPMMAGIRADSPVMHVQLGTGTGARYRHDEKAPRISSLFTVTSHEFAQQVLTDNVRFSSAGYA
Ga0318538_102935041	3300031546	Soil	LVTTPGQDDSLASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGPGSGRRSRPDQQAPRISSLFTVLSHELAQQVLTDNVRFSSAAYAM
Ga0318571_101903071	3300031549	Soil	MIMASQQDDPPGTSYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVELGGPGSRYRHDEQAPRITSLFTVTEYKLARQVLTDNVRFSSAANAMTMG
Ga0318542_101984341	3300031668	Soil	VDTTPGRDDSPAASYDPMRQFTELAGDVRDPYPMFAGIRADSPVLHVHLDTGSGARYEHDQNAPPITSLFAVSSHELAQQVL
Ga0318561_101807962	3300031679	Soil	LVTTPGRDDSPAASYDPMRQFTELAGDVRDPYPMFAGIRADSPVLHVHLGTGPGGRYEHDQNAPPLTSLFAVS
Ga0318561_106486511	3300031679	Soil	MPAGPEDAAYDPMRQFAELAGDVRDPYPMMAGIRAGSPVLEVHLAAMSGRYQHDQKAPAIPTLYSVTSYELVQQVL
Ga0318561_107826252	3300031679	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVQLSTGPGGRYQHDDKAPRITSLFTITSHELVQQVL
Ga0318572_101998812	3300031681	Soil	LVTTPGQDDSPATSYDPMRQFAELAGDVRDPYPMMAGIRADSPVLHVQLGTGSGARYRHDQKAPPITSLFTVTSNELAQQV
Ga0310686_1039846622	3300031708	Soil	LVTTPGRDGSSEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGTWSGRRSGPDQQAPRITSLFTVASHELAQQVLTDSVRFSSAG
Ga0310686_1124219142	3300031708	Soil	VVTTPGRDDSAASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLQVDFGTGSGGRYRHDQEAPRITSLFTVTSHELA
Ga0307474_108210632	3300031718	Hardwood Forest Soil	LVTTPGPDDSAEASYDPMRQFAELAGDVRDPYPMFAGIRADTPVMEVHFGTGSGGRYHHDEKAPPITSVFTVT
Ga0318493_103342831	3300031723	Soil	LVTTPGQDDSLASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGPGSGRRSRPDQQAPRISSLFTVLSHELAQQVLTDNVRFSSAAYAMTMG
Ga0318509_103759651	3300031768	Soil	MTTQQDGSPGASYDPMRQFAELAGDVRDPYPMFAGIRAETPVLHVELGSGSRYRHDEKAPRITSLFTVTGYELARQVLTDNVRF
Ga0318543_103421291	3300031777	Soil	MVSRQDGSPEASYDPMAQFAELAGDVRDPYPMFAGIRAETPVLHVELGSGSRYRHDEKAPRITSLFTVTGYELARQVLTDNVRFSSAANAMTI
Ga0318498_100072621	3300031778	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHIGSGGGAGLDQKAPRVPTIFTVTTWELAQQVLTD
Ga0318547_103761872	3300031781	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHRGSGPGGAGLDPKTPRVPTIFTVTSHELAQQVLRRVHLQD
Ga0318547_110803561	3300031781	Soil	LVTTPGRDDSPAASYDPMRQFAELAGDVRDPYPMFAGIRADSPVLHVHLGTGSGARYEHDPDAPPITSLFAVTSHELAQQVLTDNARFSSAANAM
Ga0318552_102991672	3300031782	Soil	MLQFAQLAGDVRDPYPMLAAIRTDSPVLQIHYGTGPSGEYHRDEKAPQIPSLFTVTSRELAEQVLTDNVRFSS
Ga0318552_104196432	3300031782	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVRLSTGPGGRYQHDDKAPRITSLFTITSHELVQQVLTDNVRFS
Ga0318557_102347392	3300031795	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVQLSTGPGGRYQHDDKAPRITSLFTITSHE
Ga0318550_106337651	3300031797	Soil	MASQQDGPPEASYDPMRQFAELAGDVRDPYPMFAEIRAQTPVMHVELGSGGRYRHDEKAPRITSLFTVT
Ga0318523_101142871	3300031798	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHIGSGGGAGLDHKAPRVPTIFTVTSWELAQQVLTDNERFSSAGYAS
Ga0318568_104667272	3300031819	Soil	MPAGPEDAAYDPMRQFAELAGDVRDPYPMMAGIRAGSPVLEVHLAAMSGRYQHDQKAPAIPTLYSVTSYELVQQVLTDNVR
Ga0307478_105634122	3300031823	Hardwood Forest Soil	LARTPGRDGLPEASYDPMRQFAELAGDVRDPYPMLAGIRADSPVLRVDFGPRSGRRSRLDPKAPRVPSVFTVTSHEIAQQVLTDNVR
Ga0318512_103494711	3300031846	Soil	MRQFAELAGDVRDPYPMFAGIRADTPVLQVHRGSGPGGAGLDPKTPRVPTIFTVTSHELAQQVLT
Ga0318512_106540231	3300031846	Soil	MYPGRETGLVTTPGRDDPATDYDPMQQFAELAGDVRDPYPMLAGIRADSPVLHVDFGPGSGGGSRSDQQGPWISSLFTVTSHELAQQ
Ga0306919_108711461	3300031879	Soil	LVTTPGRDDSPAAGYDPMRQFAELAGDVRDPYPMMAGIRADSPVLHVQLGTGSGARYRHDQKAPPITSLFTVTSHELARQVLTDSARFSSAG
Ga0306923_109329883	3300031910	Soil	LVTTPGQDDSLASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGPGSGRRSRPDQQAPRISSLFTVLSHE
Ga0306926_100192519	3300031954	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVRLSTGPGGRYQHDDKAPRITSLFTITSHKLA
Ga0306926_112097622	3300031954	Soil	MASQRDDSPGTSYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVELGGPGSRYRHDEQAPRITSLFTVTEYKLARQVLTDNVRFSSAANA
Ga0318563_102017991	3300032009	Soil	MSGPDGSAEAGYDPMRQFSELAGDVRDPYPMFAGIRADTPVLHVHLGPGSGGGSGLDPRAPQVPSIFTVTSHELAQQVLTDHERFS
Ga0318569_101606021	3300032010	Soil	MYPGRETGLVTTPGRDDPATDYDPMQQFAELAGDIRDPYPMLAGIRADSPVLHVDFGPGSGGGSRSDQQGPWISSLFTVTSHELAQQVLTDNARFSSAGYATTIGQVLG
Ga0318558_104652232	3300032044	Soil	VVTMPGRDDFPAASYDPMRQFTELAGDVRDPYPMFAGIRADSPVLQIHVGPGSGGGSQPDPKAPRVPFLF
Ga0318514_107285841	3300032066	Soil	LGHLSGKGAVTASQQDGSPEVGYDPMRQFAELAGDVRDPYPMFAGIRADTPVLQVHRGSGPGGAGLDPKTPRVPTIFTVTSHELAQQVLT
Ga0306924_116643292	3300032076	Soil	MASQRDDSPGTSYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVELGGPGSRYRHDEQAPRITSLFTVTEYKLARQVLTDNVRFSSAAN
Ga0306924_122404932	3300032076	Soil	MIMTSEQDGSAGTSYDPMRQFAEIAGDVRDPYPMFAGIRADTPVLYVELGGSGSRYRHDEKAPRITSLFTVTGYELARQVLTDNVRF
Ga0318577_102932562	3300032091	Soil	VSQQDGSPEASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLHVQLSTGPGGRYQHDDKAPRITSLFTITSHELVQQVLTD
Ga0307471_1033744521	3300032180	Hardwood Forest Soil	MRQFAELAGDVRDPYPMFAGIRAETPVLHVQLGTGSGSRYRHDEKAPPMTSLFTVTEHETARQVLTDTARF
Ga0306920_1022587033	3300032261	Soil	LVTTPGQDDSLASYDPMRQFAELAGDVRDPYPMLAGIRADTPVLEVHFGPGSGRRSRPDQQAPRISSLFTVLSHELAQQV
Ga0306920_1035151331	3300032261	Soil	LVTTPGRDDCPAASHDPMWQFADLAGDVHDPYPMFAGIRADSPVLHVHLGTGPGGRYEHDQNAPPLTSLFAVSSHELAQQVLTDN
Ga0335082_103616501	3300032782	Soil	MIMVSQQDGSPGASYDPMRQFAEIAGDVRDPYPMFAGIRADSPVLHVELGGSGSRYRHDQQAPRITSLFTVTSYELARQVLTDNVRFSSAANA
Ga0335079_104285551	3300032783	Soil	MRQFAELAGDVRDPYPMFAGIRAETPVLHVELGSGSRYRHDEKAPRITSLFTVTGYELARQVLTDNVRFSSAANAM
Ga0335078_117828911	3300032805	Soil	MASQQDGPPEASYDPMRQFAELAGDVRDPYPMFAEIRAQTPVMHVELGSGGRYRHDEKAPRITSLFTVTSYELARQVLTDNVRFSSAANAM
Ga0335083_114500942	3300032954	Soil	MASQQDGPPGASYDPMRQFAELAGDVRDPYPMFAEIRAQTPVMHVELGSGGRYRHDEKAPRITSLFTVTSYELARQVLTDN
Ga0370483_0147040_552_791	3300034124	Untreated Peat Soil	MARRYVETAVESGKGLVTASEEPGYDPMRQFAELAGDVRDPYPMFAGIRAQTPVLHVEVGSRHDEQAPRITSLFTVTSYE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057542

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences