Metagenome Family F057420

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057420
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	75 residues
Representative Sequence	MEPINEALELLKRQAELENGLRQAGGIRVTEERELYALRERLQRYPQAVTAILQTARNLNRPVDTLQPQDVGILG
Number of Associated Samples	97
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.41 %
% of genes near scaffold ends (potentially truncated)	20.59 %
% of genes from short scaffolds (< 2000 bps)	70.59 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.412 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (13.971 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.706 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.34% β-sheet: 0.00% Coil/Unstructured: 44.66%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.2: Ribonucleotide reductase-like	d3n37a_	3n37	0.62817
a.2.17.2: VPS28 N-terminal domain	d2f6mb2	2f6m	0.62677
a.183.1.0: automated matches	d3nvia_	3nvi	0.6242
a.2.17.0: automated matches	d6vmee_	6vme	0.62133
a.183.1.1: Nop domain	d2ozbb1	2ozb	0.61841

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF11740	KfrA_N	13.24
PF05406	WGR	5.15
PF01909	NTP_transf_2	4.41
PF03992	ABM	4.41
PF01934	HepT-like	3.68
PF00589	Phage_integrase	2.94
PF03923	Lipoprotein_16	2.94
PF02899	Phage_int_SAM_1	2.94
PF01040	UbiA	2.21
PF01596	Methyltransf_3	1.47
PF14367	DUF4411	1.47
PF00903	Glyoxalase	1.47
PF04014	MazE_antitoxin	1.47
PF08843	AbiEii	0.74
PF01734	Patatin	0.74
PF00383	dCMP_cyt_deam_1	0.74
PF13701	DDE_Tnp_1_4	0.74
PF11528	DUF3224	0.74
PF02628	COX15-CtaA	0.74
PF01595	CNNM	0.74
PF00378	ECH_1	0.74
PF02780	Transketolase_C	0.74
PF14522	Cytochrome_C7	0.74
PF00248	Aldo_ket_red	0.74
PF10711	DUF2513	0.74
PF00593	TonB_dep_Rec	0.74
PF04828	GFA	0.74
PF00210	Ferritin	0.74
PF01526	DDE_Tnp_Tn3	0.74
PF13711	DUF4160	0.74
PF13676	TIR_2	0.74
PF00441	Acyl-CoA_dh_1	0.74
PF03928	HbpS-like	0.74
PF13577	SnoaL_4	0.74
PF13328	HD_4	0.74
PF13411	MerR_1	0.74
PF00561	Abhydrolase_1	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG3831	WGR domain, predicted DNA-binding domain in MolR	Transcription [K]	5.15
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	3.68
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	3.68
COG3056	Uncharacterized lipoprotein YajG	Function unknown [S]	2.94
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	2.94
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	2.94
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.47
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.47
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	1.47
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	0.74
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.74
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.74
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.74
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.74
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.74
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.15 %
Unclassified	root	N/A	44.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.41 %
Unclassified	root	N/A	44.85 %
Viruses	superkingdom	All Organisms → Viruses	0.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.41 %
Unclassified	root	N/A	44.85 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.47 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.47 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.47 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.94 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	2.94 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.47 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	1.47 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.47 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.47 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	2.21 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.21 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.47 %
Halomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae	1.47 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.74 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.74 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.74 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.74 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2.21 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	2.21 %
Halomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas	1.47 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.47 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.74 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	0.74 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.74 %
Tepidicaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis	0.74 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Steroidobacter agaridevorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	2.21 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	1.47 %
Halomonas axialensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas axialensis	1.47 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.47 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.74 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.74 %
Tepidicaulis marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis → Tepidicaulis marinus	0.74 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	0.74 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.85 %
Steroidobacter agaridevorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	2.21 %
Variovorax sp. YR750	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR750	1.47 %
Halomonas axialensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas axialensis	1.47 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.47 %
Methylocystis sp. SB2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SB2	0.74 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.74 %
Tepidicaulis marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis → Tepidicaulis marinus	0.74 %
Nitrosococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	0.74 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10015722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Nitrosococcus	4844	Open in IMG/M
3300001356\|JGI12269J14319_10005590	All Organisms → cellular organisms → Bacteria	11082	Open in IMG/M
3300004091\|Ga0062387_100967840	Not Available	649	Open in IMG/M
3300004092\|Ga0062389_100007762	All Organisms → cellular organisms → Bacteria	6725	Open in IMG/M
3300004092\|Ga0062389_102621765	Not Available	670	Open in IMG/M
3300004092\|Ga0062389_103395668	Not Available	597	Open in IMG/M
3300004152\|Ga0062386_101066251	Not Available	670	Open in IMG/M
3300004777\|Ga0007827_10016071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1857	Open in IMG/M
3300004806\|Ga0007854_10369011	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005938\|Ga0066795_10208254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas axialensis	581	Open in IMG/M
3300005947\|Ga0066794_10126209	Not Available	768	Open in IMG/M
3300005994\|Ga0066789_10176085	Not Available	904	Open in IMG/M
3300005994\|Ga0066789_10248658	Not Available	746	Open in IMG/M
3300006052\|Ga0075029_100478468	Not Available	820	Open in IMG/M
3300006052\|Ga0075029_100610492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300006052\|Ga0075029_101208319	Not Available	528	Open in IMG/M
3300006086\|Ga0075019_10093022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis → Tepidicaulis marinus	1726	Open in IMG/M
3300006162\|Ga0075030_101151999	Not Available	609	Open in IMG/M
3300006354\|Ga0075021_10801790	Not Available	608	Open in IMG/M
3300006354\|Ga0075021_10993764	Not Available	547	Open in IMG/M
3300006638\|Ga0075522_10009890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6394	Open in IMG/M
3300009029\|Ga0066793_10178707	Not Available	1237	Open in IMG/M
3300009175\|Ga0073936_10009581	All Organisms → cellular organisms → Bacteria → Proteobacteria	12025	Open in IMG/M
3300009500\|Ga0116229_10377016	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300009500\|Ga0116229_10674352	Not Available	845	Open in IMG/M
3300009500\|Ga0116229_10973280	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009500\|Ga0116229_11408007	Not Available	552	Open in IMG/M
3300009510\|Ga0116230_10045557	All Organisms → cellular organisms → Bacteria → Proteobacteria	4064	Open in IMG/M
3300009510\|Ga0116230_10156547	Not Available	1888	Open in IMG/M
3300009510\|Ga0116230_10413646	Not Available	1047	Open in IMG/M
3300009519\|Ga0116108_1018889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2392	Open in IMG/M
3300009525\|Ga0116220_10345797	Not Available	659	Open in IMG/M
3300009624\|Ga0116105_1038472	Not Available	1063	Open in IMG/M
3300009632\|Ga0116102_1016997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2564	Open in IMG/M
3300009701\|Ga0116228_10020239	All Organisms → cellular organisms → Bacteria → Proteobacteria	5793	Open in IMG/M
3300009709\|Ga0116227_10150392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	1837	Open in IMG/M
3300009759\|Ga0116101_1001911	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300009764\|Ga0116134_1082614	Not Available	1180	Open in IMG/M
3300009787\|Ga0116226_10003961	All Organisms → cellular organisms → Bacteria	13071	Open in IMG/M
3300009787\|Ga0116226_10006320	All Organisms → cellular organisms → Bacteria	10641	Open in IMG/M
3300010341\|Ga0074045_10375594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	924	Open in IMG/M
3300010379\|Ga0136449_100019855	All Organisms → cellular organisms → Bacteria → Proteobacteria	17256	Open in IMG/M
3300010379\|Ga0136449_100306600	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300010379\|Ga0136449_100384250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR750	2502	Open in IMG/M
3300010379\|Ga0136449_100449980	All Organisms → cellular organisms → Bacteria → Proteobacteria	2260	Open in IMG/M
3300010379\|Ga0136449_100813616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1541	Open in IMG/M
3300010379\|Ga0136449_101505009	Not Available	1030	Open in IMG/M
3300010379\|Ga0136449_102828615	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300010379\|Ga0136449_102967756	Not Available	664	Open in IMG/M
3300010379\|Ga0136449_103603918	Not Available	587	Open in IMG/M
3300012357\|Ga0137384_10078411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	2744	Open in IMG/M
3300012363\|Ga0137390_10720343	Not Available	959	Open in IMG/M
3300012582\|Ga0137358_10071963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	2321	Open in IMG/M
3300012685\|Ga0137397_10358323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1087	Open in IMG/M
3300014156\|Ga0181518_10277139	Not Available	843	Open in IMG/M
3300014158\|Ga0181521_10102976	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300014158\|Ga0181521_10175371	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300014158\|Ga0181521_10531215	Not Available	559	Open in IMG/M
3300014159\|Ga0181530_10236019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300014162\|Ga0181538_10426618	Not Available	704	Open in IMG/M
3300014164\|Ga0181532_10090301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1928	Open in IMG/M
3300014164\|Ga0181532_10391979	Not Available	772	Open in IMG/M
3300014167\|Ga0181528_10304735	Not Available	862	Open in IMG/M
3300014201\|Ga0181537_10015804	Not Available	5436	Open in IMG/M
3300014489\|Ga0182018_10113182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300014492\|Ga0182013_10058283	All Organisms → cellular organisms → Bacteria → Proteobacteria	2864	Open in IMG/M
3300014495\|Ga0182015_10047208	All Organisms → cellular organisms → Bacteria → Proteobacteria	3174	Open in IMG/M
3300014501\|Ga0182024_10739425	Not Available	1208	Open in IMG/M
3300014638\|Ga0181536_10079873	All Organisms → cellular organisms → Bacteria → Proteobacteria	1947	Open in IMG/M
3300014838\|Ga0182030_10051030	All Organisms → cellular organisms → Bacteria → Proteobacteria	6587	Open in IMG/M
3300014838\|Ga0182030_10793036	Not Available	868	Open in IMG/M
3300014838\|Ga0182030_10876781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	808	Open in IMG/M
3300015206\|Ga0167644_1001791	All Organisms → cellular organisms → Bacteria → Proteobacteria	14367	Open in IMG/M
3300015206\|Ga0167644_1017327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. SB2	3272	Open in IMG/M
3300017940\|Ga0187853_10011515	All Organisms → cellular organisms → Bacteria	5366	Open in IMG/M
3300017940\|Ga0187853_10102611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1406	Open in IMG/M
3300017946\|Ga0187879_10157023	Not Available	1285	Open in IMG/M
3300017948\|Ga0187847_10001035	All Organisms → cellular organisms → Bacteria → Proteobacteria	26773	Open in IMG/M
3300018013\|Ga0187873_1049874	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300018016\|Ga0187880_1175766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	987	Open in IMG/M
3300018017\|Ga0187872_10123214	Not Available	1270	Open in IMG/M
3300018024\|Ga0187881_10433910	Not Available	537	Open in IMG/M
3300018025\|Ga0187885_10041460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	2413	Open in IMG/M
3300018026\|Ga0187857_10354315	Not Available	665	Open in IMG/M
3300018030\|Ga0187869_10013745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4820	Open in IMG/M
3300018033\|Ga0187867_10239916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1023	Open in IMG/M
3300018034\|Ga0187863_10637280	Not Available	600	Open in IMG/M
3300018035\|Ga0187875_10085989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1799	Open in IMG/M
3300018037\|Ga0187883_10066572	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300018038\|Ga0187855_10045822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2737	Open in IMG/M
3300018040\|Ga0187862_10008141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9233	Open in IMG/M
3300018040\|Ga0187862_10872450	Not Available	517	Open in IMG/M
3300018086\|Ga0187769_10152717	Not Available	1691	Open in IMG/M
3300019787\|Ga0182031_1089024	All Organisms → cellular organisms → Bacteria → Proteobacteria	761	Open in IMG/M
3300020726\|Ga0214220_1007141	All Organisms → cellular organisms → Bacteria	2012	Open in IMG/M
3300020727\|Ga0214246_1035105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	787	Open in IMG/M
3300021474\|Ga0210390_10927715	Not Available	715	Open in IMG/M
3300021478\|Ga0210402_10870147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	827	Open in IMG/M
3300021479\|Ga0210410_10156107	Not Available	2035	Open in IMG/M
3300021479\|Ga0210410_11078378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	693	Open in IMG/M
3300022555\|Ga0212088_10020587	All Organisms → cellular organisms → Bacteria → Proteobacteria	8912	Open in IMG/M
3300023088\|Ga0224555_1135752	Not Available	727	Open in IMG/M
3300023090\|Ga0224558_1196503	Not Available	611	Open in IMG/M
3300026291\|Ga0209890_10137277	Not Available	821	Open in IMG/M
3300026291\|Ga0209890_10164056	Not Available	731	Open in IMG/M
3300026555\|Ga0179593_1202407	Not Available	3293	Open in IMG/M
3300027645\|Ga0209117_1169659	Not Available	562	Open in IMG/M
3300027807\|Ga0209208_10075118	Not Available	2538	Open in IMG/M
3300027807\|Ga0209208_10201895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1106	Open in IMG/M
3300027898\|Ga0209067_10127132	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1340	Open in IMG/M
3300027902\|Ga0209048_10127154	All Organisms → cellular organisms → Bacteria	1928	Open in IMG/M
3300027905\|Ga0209415_10008945	All Organisms → cellular organisms → Bacteria	17280	Open in IMG/M
3300027905\|Ga0209415_10513103	Not Available	919	Open in IMG/M
3300027905\|Ga0209415_10630564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. YR750	786	Open in IMG/M
3300027911\|Ga0209698_11392219	Not Available	511	Open in IMG/M
3300028762\|Ga0302202_10279957	Not Available	813	Open in IMG/M
3300029883\|Ga0311327_10719582	Not Available	589	Open in IMG/M
3300029987\|Ga0311334_10138817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300030011\|Ga0302270_10216692	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300030051\|Ga0302195_10234359	Not Available	833	Open in IMG/M
3300030503\|Ga0311370_10397689	Not Available	1733	Open in IMG/M
3300030503\|Ga0311370_12197543	Not Available	542	Open in IMG/M
3300031236\|Ga0302324_102989354	Not Available	563	Open in IMG/M
3300031708\|Ga0310686_102945780	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300031708\|Ga0310686_115597985	Not Available	505	Open in IMG/M
3300031730\|Ga0307516_10000057	All Organisms → cellular organisms → Bacteria → Proteobacteria	122512	Open in IMG/M
3300031788\|Ga0302319_10375064	Not Available	1606	Open in IMG/M
3300032160\|Ga0311301_10065965	All Organisms → cellular organisms → Bacteria → Proteobacteria	7774	Open in IMG/M
3300032160\|Ga0311301_10500047	Not Available	1803	Open in IMG/M
3300032160\|Ga0311301_12600284	Not Available	562	Open in IMG/M
3300032160\|Ga0311301_12896099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Halomonas → Halomonas axialensis	520	Open in IMG/M
3300032668\|Ga0316230_1061972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1597	Open in IMG/M
3300033887\|Ga0334790_006862	All Organisms → cellular organisms → Bacteria → Proteobacteria	6690	Open in IMG/M
3300033887\|Ga0334790_081723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1093	Open in IMG/M
3300033888\|Ga0334792_000754	All Organisms → cellular organisms → Bacteria → Proteobacteria	21548	Open in IMG/M
3300034125\|Ga0370484_0058708	Not Available	963	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.71%
Host-Associated	Host-Associated	10.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.53%
Aquatic	Environmental → Aquatic	41.18%
Plants	Host-Associated → Plants	10.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.24%
Freshwater	Environmental → Aquatic → Freshwater	34.56%
Peat	Environmental → Terrestrial → Peat	10.29%
Peat Moss	Host-Associated → Plants → Peat Moss	9.56%
Sediment	Environmental → Aquatic → Sediment	6.62%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	28.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.29%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	9.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.62%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.41%
Lake	Environmental → Aquatic → Freshwater → Lake	1.47%
Loam	Environmental → Terrestrial → Soil → Loam	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.59%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	11.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.29%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	9.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.47%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	13.24%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	9.56%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.09%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.68%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	3.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	3.68%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.94%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.21%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.21%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.47%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.47%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.47%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.47%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.74%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.74%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027807	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG (SPAdes)	Host-Associated	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031730	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM	Host-Associated	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032668	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100157223	3300000567	Peatlands Soil	LEGQAELETGLRQAGGIRITEERNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG*
JGI12269J14319_100055905	3300001356	Peatlands Soil	MGVTIMLETVDQALAMLKRQAEIESGLRQPGGVRVCEERELYALRQRLQRYPEAVAAILQTASNLRRPVDTLCVEDVRRSA*
Ga0062387_1009678401	3300004091	Bog Forest Soil	MALTEPIDHALALLKRQATLETALRQPRDIRVTEERELYAVRHQLQRYPEAVSAILQTASSLHRPADSLAPQDVRN
Ga0062389_1000077628	3300004092	Bog Forest Soil	MALTEPIDHALALLKRQATLETALRQPRDIRVTEERELYAVRHQLQRYPEAVSAILQTASSLHRPADSLAPQDVRNLR*
Ga0062389_1026217652	3300004092	Bog Forest Soil	MEPINEALELLKRQAELENGLRQAGGIRITEERELYALRERLQRYPQAVTAILQTARNLNRPVATLQPQDVRLLG*
Ga0062389_1033956681	3300004092	Bog Forest Soil	MDTIAEALDLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVSSLG*
Ga0062386_1010662511	3300004152	Bog Forest Soil	MALIEPLDRALALLKRQAALEAGLRQPGGIRITEERELYALREQLQRYPQAVAAILQTASALRRPVDSLHPQDVRN
Ga0007827_100160712	3300004777	Freshwater	MEEPIDNALALLKRQAVLESGLRQLGGIRVTEERELFAVREQLRRYPEAVAAILQAAASLRRPVDALNPEHVRSLC*
Ga0007854_103690111	3300004806	Freshwater	RQAELETGLRQPGGIRVTAERELYALRDRLQRYPEAVTAILHAARNLNRPVDTLRPQDILGLE*
Ga0066795_102082542	3300005938	Soil	MEPITEALTLLKRQSELERGLRQAGGIRVTEERELYAVRERLQRYPQAVAAILQMASNLHRPVDTLSSADLRNMS*
Ga0066794_101262092	3300005947	Soil	ELLKRQAELEAGLRQPGGIRVTEERELFAVRAQLQRYPQAVTAILQTAANLRRPADTLAPQDVRNFG*
Ga0066789_101760852	3300005994	Soil	MDPIAEALELLRRQAQLETGLRQPGGIRVTEERELYSLRERLQRYPQAVTAILQTARNLNRPVDTLRLQDVGGLG*
Ga0066789_102486581	3300005994	Soil	MEPINEALDLLKRQAELETGLRQPGGIRVTEERELYALRDRLQRYPQAVTAILQTARNLNRPVETLEPHDVRRLG*
Ga0075029_1004784682	3300006052	Watersheds	MAEPIDHALALLKRQAALEAGLRQLGGIRVTEERELYAVRDQLRRYPEAVAAILQAASNLRRPVDSLHVDDVRSLC*
Ga0075029_1006104922	3300006052	Watersheds	MEPINETLEMLKRQAQLETGLRQAGGIRITEERELHALRERLQRYPQTVTAILQTARNLNQPVGALQPQDVSSIA*
Ga0075029_1012083191	3300006052	Watersheds	LELLKRQAQLETGLRQAGGIRITEERELYALRERLQRYPQAVTAILQTARNLNRPVDALEARDVRGLG*
Ga0075019_100930223	3300006086	Watersheds	MDNIHTALHLLKRQAELENRLRQPGGLRVTSESELYALRERLQRYPEAVNAILQMAATMKRPVDSITSADVCRYD*
Ga0075030_1011519991	3300006162	Watersheds	YMAEPIDHALALLKRQAALEAGLRQLGGIRVTEERELYAVRDQLRRYPEAVAAILQAASNLRRPVDSLHVDDVRSLC*
Ga0075021_108017902	3300006354	Watersheds	PINEALELLKRQAQLETGLRTAGGIRIIEERELYALRERLQRYPHAVTAIRQTARILNRSVDALQPQDLQSLG*
Ga0075021_109937642	3300006354	Watersheds	MEPIHHALNLLKRHAELEAGLRQLGGIRVTEERELYALREQLQRYPEAVAAILQTASNLRRPVDSLHAHDVRS
Ga0075522_100098908	3300006638	Arctic Peat Soil	MDPIAEALELLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVSALG*
Ga0066793_101787072	3300009029	Prmafrost Soil	MEPITEALELLKRQAVLENGLRRAGGIRVTEERELFAVRAQLQRYPQAVAAILQMASNLHRPVDTLSSADLRNVS*
Ga0073936_100095814	3300009175	Freshwater Lake Hypolimnion	VEPIQEALQLLKRQAELETGLRQPGGIRVTAERELYALRDRLQRYPEAVTAILQTARNLNRPVDTLRPQDVLGVD*
Ga0116229_103770162	3300009500	Host-Associated	LELLKRQAELEVGMYQPGGLRVTEEREIYPLRERLRRYPQALSAILQAARNMNRPVETLEPQDVRRLI*
Ga0116229_106743522	3300009500	Host-Associated	METLNEGLELLKRQAELESGLRHAGGIRITEERELYALRERLKRYPQAVPAILQAARHLNRPIDTLQAQDVRQLG*
Ga0116229_109732802	3300009500	Host-Associated	MEPLNEALELLKRQAELEAGLRQAGGIRITEERELYALRERLQRYPQAVTAILQAARNLNRPVDTLQANDVRPLG*
Ga0116229_114080071	3300009500	Host-Associated	ILEDEMEPLNEALDLLKRQAELEAGLRQPGGIRITEERELYALRDRLQRYPHAVAAILQTAHSLNRPVETLLPQDVRRLA*
Ga0116230_100455575	3300009510	Host-Associated	MEPLNEALELLKRQAELESGLRHAGGIRITEERELYALRERLQRYPQAVTAILQAARHLNRPIDTLQAQDVRQMG*
Ga0116230_101565473	3300009510	Host-Associated	MEPLNEALDLLKRQAELEAGLRQPGGIRITEERELYALRDRLQRYPHAVAAILQTAHSLNRPVETLQPHDVRRLG*
Ga0116230_104136461	3300009510	Host-Associated	METLNEGLELLKRQAELESGLRHAGGIRITEELELYALRERLKRYPQAVPAILQAARHLNRPIDTLQAQDVRQLG*
Ga0116108_10188892	3300009519	Peatland	MESISEALELLKRQAVLESRMRQAGGIRVTEERELYVLRERVQRYPQAVAAILKTASNLHRPVDTLSSADLRDLS*
Ga0116220_103457972	3300009525	Peatlands Soil	MRRPLDLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVSGLG*
Ga0116105_10384722	3300009624	Peatland	MELIPEALELLKRQAILEHRMRQAGGIRVIEERELYAVRERVQHYPQAVAAILAMASDLHRPVDTLSTADLRNLS*
Ga0116102_10169973	3300009632	Peatland	LEGQAELETGLRQVGGIRITEGRNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG*
Ga0116228_100202395	3300009701	Host-Associated	MEPLNEGLELLKRQAELESGLRHAGGIRITEERELYALRERLKRYPQAVPAILQAARHLNRPIDTLQAQDVRQLG*
Ga0116227_101503922	3300009709	Host-Associated	MEPIAEALELLKRQAEPEGGMHQPGGLRVTEEREIYLLRERLKCYPQAVSAILQAARNMNRPVETLEPKDIRRLV*
Ga0116101_10019116	3300009759	Peatland	MESITEALELLKRQAILEHRMRQAGGIRVIEERELYAVRERVQHYPQAVAAILAMASDLHRPVDTLSTADLRNLS*
Ga0116134_10826143	3300009764	Peatland	VDPITTALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVETLQPQDVRSLG*
Ga0116226_100039618	3300009787	Host-Associated	MNTISTVLDLLKRQAELEEGLRQPGGNRVTEEGEIYVLREHLQRYPQAVTAILQAARSLNRPVEALRPQDIRNLA*
Ga0116226_100063208	3300009787	Host-Associated	MEPLNEGLELLKRQAELESGLRHAGGIRITEELELYALRERLKRYPQAVPAILQAARHLNRPIDTLQAQDVRQLG*
Ga0074045_103755941	3300010341	Bog Forest Soil	LLKRQAVLESRMRQAGGIRVTEERELYVLRERVQRYPQAVAAILKTASNLHRPVDTLSSADLRDLS*
Ga0136449_1000198559	3300010379	Peatlands Soil	MLETVDQALAMLKRQAEIESGLRQPGGVRVCEERELYALRQRLQRYPEAVAAILQTASNLRRPVDTLCVEDVRRSA*
Ga0136449_1003066002	3300010379	Peatlands Soil	MEPITEALELLKRQAVLENGLRRAGGIRVTEERELYAVRERLQRYPQAVATILQMASNLHRPVDTLSSADLRNVS*
Ga0136449_1003842503	3300010379	Peatlands Soil	MLETVTDALAMLKRQAELESGLRQPGGIRVMEERELYALRQRLQRYPEAVAAILQAAATLRRPVDSLSSDDIHNIA*
Ga0136449_1004499802	3300010379	Peatlands Soil	MEPINEALELLKRQAELETGLRQAGGIRITEERELFALRERLQRYPQAVTAILQTARNLHRPVDTLQPQDVRLLG*
Ga0136449_1008136162	3300010379	Peatlands Soil	MALFGYPIHPHSESSTDPIVEALDLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVSSLG*
Ga0136449_1015050093	3300010379	Peatlands Soil	MEPITEALELLKRQAELEKGLRQAGGIRVTEERELYAVRAQLQRYPQAVAAILQMASNLHRPVDTLSSADLRNLS*
Ga0136449_1028286151	3300010379	Peatlands Soil	LELLRRQAQLEAGLRQPGGIRVTEERELYSLREQLQRNPQAVTAILQTARNLNRPVDTLRPQDVCALG*
Ga0136449_1029677561	3300010379	Peatlands Soil	LETGLRQPGGIRVTEERELYSLREQLQRCPQAVTAILQTARNLNRPVDALRPQDVSGLG*
Ga0136449_1036039182	3300010379	Peatlands Soil	VHPINEALELVERQAELETGLRQIGGIRIAEERELYALRKRLQRYPQAVTAILQTAGSLNRPVDTLQ
Ga0137384_100784113	3300012357	Vadose Zone Soil	VDPITTALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVDTLQPQDVRSLG*
Ga0137390_107203431	3300012363	Vadose Zone Soil	MQPITEMLKLLERHAELENGLRQPGGLHVAEKQDVHALRERLQRYPQTVTAILQAAQTLRRPVDTLQPQDVHRLLV*
Ga0137358_100719633	3300012582	Vadose Zone Soil	MEEPIQEALQLLKRQAELEIGMRQPGGLRVTEEREIYALRERLQRYPEAVSAILQAARSLNRPVDTLQPQDVRRLV*
Ga0137397_103583231	3300012685	Vadose Zone Soil	LKRQAELEEGLRQPGGIRVTAEGEIYALRERLQRYPQAVTAIPQAARALNRLVETLEPRDIRGLV*
Ga0181518_102771392	3300014156	Bog	MDPINEALELLKRQAELEAGLRQPGGIRVTEERELFAVRAQLQRYPQAVTAILQTAANLRRPADTLV
Ga0181521_101029765	3300014158	Bog	MEPINEALELLKRQAELENGLRQAGGIRVTEERELYALRERLQRYPQAVTAILQTARNLNRPVDTLQPQDVGILG*
Ga0181521_101753711	3300014158	Bog	LHHLDEWSSVMDPINEALELLKRQANLEAGLRQPDDIRVTEERELFAVRAQLQRYPQAVTAILQTAANLRRPADTLVPEDVRNFG*
Ga0181521_105312151	3300014158	Bog	LEGQAELETGLRQVGGIRITEERNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG*
Ga0181530_102360193	3300014159	Bog	DPINEALELLKRQAVLEAGLRQPGGIRVTEERELFAVRAQLQRYPQAVTAILQTAANLRRPADTLAPQDVRNFG*
Ga0181538_104266182	3300014162	Bog	MDPINEALELLKRQANLEAGLRQPDDIRVTEERELFAVRAQLQRYPQAVTAILQTAANLRRPADTLVPEDVRNFG*
Ga0181532_100903013	3300014164	Bog	MEPINEALELLKRQAELENGLRQAGGIRVTEERELYALRERLQRYPQAVTAILQTARILNRPVDTLRPQDVRILG*
Ga0181532_103919792	3300014164	Bog	MDPINEALELLKRQAELEAGLRQAGGIRVTEERELFAVRAQLQRYPQAVTAILQTAANLRRPADTLAPQDVRNFG*
Ga0181528_103047352	3300014167	Bog	MEPIAEVLELLKRQAELESGLHQPGGLRVTQEREIYLLRERLTRYPQAVSAILQAARNLNRPVETLEPRDIRRLV*
Ga0181537_100158049	3300014201	Bog	MEPLDEALELLKRQAELEAGLRQAGGIRITEEREQYALRERLQRYPQAVAAILQAARNLNRPVDTLQAQNVRPLG*
Ga0182018_101131822	3300014489	Palsa	MALIEPLDRALALLKRQAALEAGLRQPGGIRITEERELYALREQLQRYPQAVAAILQTASALRRPVDSLHPHDVRNLV*
Ga0182013_100582833	3300014492	Bog	VEPLHEALRLIKRQAELEIAMRQPGGIRVTEEREIYALRERLQRYPQAVTAILQAARTLNRPVDTLQLHDVQRLG*
Ga0182015_100472083	3300014495	Palsa	MLNLGEIWAVSVPLTDPIDHALALLKRQVALEADLRQPGRIRVAEERELCAVREQLQRYPQAVAAILQTASNLRRPVDSLRPQDVRNWV*
Ga0182024_107394251	3300014501	Permafrost	MDPIAEALVLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDALRPQDVSGLG*
Ga0181536_100798733	3300014638	Bog	MEPINEALELLKRQAELETGLRQAGGIRITEERELYALRDRLQRYPQAVTAILQTARNLNRPVETLEPRDVRRLG*
Ga0182030_100510307	3300014838	Bog	MALTEPIDHALALLKRQAVLETGLRQPGGIRVTEERELYALRHQLQRYPEAVSAILQTASNLHRPVDSLAPQDVRNFS*
Ga0182030_107930361	3300014838	Bog	GRACCHQETQAVAPEALMALFGYPIQQQPECSMDPIAEALELLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVSGLG*
Ga0182030_108767812	3300014838	Bog	MEPIAEVLELLKRQAELEGGMHQPGGLRVTEERDIYQLRERLKRYPQAVSAILQAARNMNRPVETLATQDIQSLV*
Ga0167644_100179111	3300015206	Glacier Forefield Soil	MEPIAEVLELLKRQAELENGLRQPGGLRVTEEREIYALRERLQRYPQAVSAILQAAQNLHPPVDSLQARDIRNSV*
Ga0167644_10173274	3300015206	Glacier Forefield Soil	MDPIAEALDLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRLQDVSGLG*
Ga0187853_100115153	3300017940	Peatland	MESISEALELLKRQAVLESRMRQAGGIRVTEERELYVLRERVQRYPQAVAAILKTASNLHRPVDTLSSADLRDLS
Ga0187853_101026112	3300017940	Peatland	LEGQAELETGLRQAGGIRITEGRNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG
Ga0187879_101570233	3300017946	Peatland	MEPINEALELLKRQAELETGLRQAGGIRITEERELYALRDRLQRYPQAVTAILQTARNLNRPVETLEPRDVRRLG
Ga0187847_1000103513	3300017948	Peatland	MESITEALELLKRQAILEHRMRQAGGIRVIEERELYAVRERVQHYPQAVAAILAMASDLHRPVDTLSTADLRNLS
Ga0187873_10498743	3300018013	Peatland	SEALELLKRQAVLESRMRQAGGIRVTEERELYVLRERVQRYPQAVAAILKTASNLHRPVDTLSSADLRDLS
Ga0187880_11757662	3300018016	Peatland	VDPITTALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVETLQPQDVRSLG
Ga0187872_101232141	3300018017	Peatland	QAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVSAFG
Ga0187881_104339101	3300018024	Peatland	LEGQAELETGLRQVGGIRITEGRNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG
Ga0187885_100414602	3300018025	Peatland	MESISEALELLKRQAVLESRMRQAGGIRVTEERELYVLRERVQRYPQAVAAILKTVCNLHRPVDTLSSAYLRDLS
Ga0187857_103543152	3300018026	Peatland	VHLINEALELLKGQAELETGLRQAGGIRITEERNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG
Ga0187869_100137453	3300018030	Peatland	LEGQAELETGLRQAGGIRITEERNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTRQAQDVRSLG
Ga0187867_102399162	3300018033	Peatland	LNTQLEFMMEPIIEALELLKRQAELEAGLRLAGGIRVTEERELYAVRAQLERYPHAVAAILQTASNLHRPVDTLSAADPRNLS
Ga0187863_106372801	3300018034	Peatland	MEPITEALELLKRQAKLEAGLRLAGGIQVTEERELYAVRAKLERYPQAVAAILQTASNLHRPVDMLSAADLRNLS
Ga0187875_100859892	3300018035	Peatland	MEPITEALELLKRQAELEAGLRMAGGIRVTEERELYAVRAQLERYPHAVAAILQTASNLHRPVDTLSAADPRNLS
Ga0187883_100665721	3300018037	Peatland	VHLINEALELLKGQAELETGLRQAGGIRITEERNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTRQAQDVRSLG
Ga0187855_100458223	3300018038	Peatland	MEPINEALELLKRQAELENGLRQAGGIRVTEERELYALRERLQRYPQAVTAILQTARILNRPVDTLRPQDVRILG
Ga0187862_100081417	3300018040	Peatland	LEGQAELETGLRQAGGIRITEERNLYALRKRLQRYAQAVTAILQTAGSLNRPVDTLQAQDVRSLG
Ga0187862_108724501	3300018040	Peatland	ALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVETLQPQDVRSLG
Ga0187769_101527172	3300018086	Tropical Peatland	MDPISTALELLKRQAILENGLRQAGGIRVTEERELFAVRAQLQHYPQAVAAILQVASNLHRPVDTLSSADLLNLS
Ga0182031_10890241	3300019787	Bog	ALRLIKRQAELEIAMRQPGGIRVTEEREIYALRERLQRYPQAVTAILQAARTLNRPVDTLQLHDVQRLG
Ga0214220_10071412	3300020726	Freshwater	VEPIQEALQLLKRQAELETGLRQPGGIRVTAERELYALRDRLQRYPEAVTAILHAARNLNRPVDTLRPQDILGLE
Ga0214246_10351051	3300020727	Freshwater	MEEPIDNALALLKRQAVLESGLRQLGGIRVTEERELFAVREQLRRYPEAVAAILQAAASLRRPVDALNPEHVRSLC
Ga0210390_109277152	3300021474	Soil	MEPMTEALALMKRQSELETGLRQPGGIRVTEERELYAVRQRLQRYPQAVAAILQTASNLRRPVDALSYSDLQSVS
Ga0210402_108701471	3300021478	Soil	MNTISTVLDLLKRQAELEEGLRQPGGIRVTEEREIYALRERLQHYPQAVTAILQAARSLNRPVEALRPQDISGLV
Ga0210410_101561073	3300021479	Soil	MEPIAEVLELLRRQAELENGLRQPGAIRVAEEREIYALREHLQRYPQAVTAILQAARTLNRPVHTLQPQDVRHLV
Ga0210410_110783782	3300021479	Soil	MNTISTVLDLLKRQAELEEGLRQPGGNRVTEEGEIYALRERLQLYPQAVTAILQAARSLNRPVEALRPQDISGLV
Ga0212088_100205874	3300022555	Freshwater Lake Hypolimnion	VEPIQEALQLLKRQAELETGLRQPGGIRVTAERELYALRDRLQRYPEAVTAILQTARNLNRPVDTLRPQDVLGVD
Ga0224555_11357521	3300023088	Soil	MEPIAEVLELLKRQAELENGLRQPGGIWVTEEREIYALRERLQRYPQAVSAILQAARSLNRPVETLQPQDVRRLV
Ga0224558_11965031	3300023090	Soil	IDDSTVNFRNRRTPVDPITTALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVETLQPQDVRSLG
Ga0209890_101372771	3300026291	Soil	MDPIAEALELLRRQAQLETGLRQPGGIRVTEERELYSLRERLQRYPQAVTAILQTARNLNRPVDTLRLQDVGGLG
Ga0209890_101640561	3300026291	Soil	MEPINEALDLLKRQAELETGLRQPGGIRVTEERELYALRDRLQRYPQAVTAILQTARNLNRPVETLEPHDVRRLG
Ga0179593_12024074	3300026555	Vadose Zone Soil	MEPITEVLELLKRQAELENGLRQPGGIRVTEEREIYALRERLQRHPQAVTAILQAARTLNRRPVDTLRPQDVRGLV
Ga0209117_11696591	3300027645	Forest Soil	VHPINEALESLEGQAELETALRQVGGIRITEERNLYALRKRLQRYPQAVTAILQTAGSLNRPVDTLQAQEVRSLG
Ga0209208_100751183	3300027807	Host-Associated	MEPLNEALELLKRQAELESGLRHAGGIRITEERELYALRERLQRYPQAVTAILQAARHLNRPIDTLQAQDVRQMG
Ga0209208_102018951	3300027807	Host-Associated	NEALDLLKRQAELEAGLRQPGGIRITEERELYALRDRLQRYPHAVAAILQTAHSLNRPVETLQPHDVRRLG
Ga0209067_101271322	3300027898	Watersheds	MDNIHTALHLLKRQAELENRLRQPGGLRVTSESELYALRERLQRYPEAVNAILQMAATMKRPVDSITSADVCRYD
Ga0209048_101271542	3300027902	Freshwater Lake Sediment	MAEPIDHALALLKRQAALEAGLRQLGGVRVSEERELYAVREQLRRYPEAVAAILQTAANLRRPVEALNSEHVRSLC
Ga0209415_100089459	3300027905	Peatlands Soil	MGVTIMLETVDQALAMLKRQAEIESGLRQPGGVRVCEERELYALRQRLQRYPEAVAAILQTASNLRRPVDTLCVEDVRRSA
Ga0209415_105131033	3300027905	Peatlands Soil	MEPINEALELLKRQAELETGLRQAGGIRITEERELFALRERLQRYPQAVTAILQTARNLHRPVDTLQPQDVRLLG
Ga0209415_106305642	3300027905	Peatlands Soil	MLETVTDALAMLKRQAELESGLRQPGGIRVMEERELYALRQRLQRYPEAVAAILQAAATLRRPVDSLSSDDIHNIA
Ga0209698_113922191	3300027911	Watersheds	VLYMAEPIDHALALLKRQAALEAGLRQLGGIRVTEERELYAVRDQLRRYPEAVAAILQAASNLRRPVDSLHVDDVRSLC
Ga0302202_102799571	3300028762	Bog	MEPINEALELLKRQAELESGLRQPGGIRITEERELYALRDRLQRYPQAVTAILQTARNLNRPVETLQATDVRRLG
Ga0311327_107195822	3300029883	Bog	MEPINEALELLKRQAELESGLRQPGGIRITEERELYALRDRLQRYPQAVTAILQIARNLNRP
Ga0311334_101388173	3300029987	Fen	MEPINEALELLKRQAAIEYGLRQPGGIRITEEWELYTLRERLQRYPQAVNAILQTARNLNRPIDALRAQDVSSLA
Ga0302270_102166922	3300030011	Bog	MEPINEALELLKRRAELESGLRQPGGIRITEERELYALRDRLQRYPQAVTAILQTARNLNRPVETLQATDVRRLG
Ga0302195_102343591	3300030051	Bog	MEPINEALELLKRQAELESGLRQPGGIRITEERELYALRDRLQRYPQAVTAILQIARNLNRPVETLQA
Ga0311370_103976892	3300030503	Palsa	MEPITEALELLKRQAELEAGLRLAGGIQVTEERELYAVRAKLERYPQAVAAILQMASNLHRPVDALSSKDLRNLS
Ga0311370_121975432	3300030503	Palsa	MEPITEALELLKRQAELEAGLRLAGGIRVTEERELYAVRAKLERYPQAVAAILQMASNLHRPVDTLSSADLRNLS
Ga0302324_1029893541	3300031236	Palsa	MLNLGEIWAVSVPLTDPIDHALALLKRQVALEADLRQPGRIRVAEERELCAVREQLQRYPQAVAAILQTASNLRRPVDSLRPQDVRNWV
Ga0310686_1029457802	3300031708	Soil	MEPITEALELLKRQAELAAGLRLAGGIQVTKERELYAVRATLERYPQAVAAILQMASNLHRPVDTPSSARHISRTPRVI
Ga0310686_1155979851	3300031708	Soil	MEPITEALELLKRQAELEAGLRLAGGIRVTEERELYAVRAKLERYPQAVAAILQTASNLHRPVDTLSSADLRNLS
Ga0307516_100000579	3300031730	Ectomycorrhiza	MNTISTVLDLLKRQAELEEGLRQPGGNRVTEEGEIYALRERLQHYPHAVTAILQAARSLNRPVEALRPQDISRLV
Ga0302319_103750643	3300031788	Bog	MEPITEVLELLKRQAELESGLRQPGGLRVTEEQEIYALRERLQRYPQAVFAILQAARTLNRPVDTLQPQDVRRLV
Ga0311301_100659659	3300032160	Peatlands Soil	MLETVDQALAMLKRQAEIESGLRQPGGVRVCEERELYALRQRLQRYPEAVAAILQTASNLRRPVDTLCVEDVRRSA
Ga0311301_105000471	3300032160	Peatlands Soil	MRRPLDLLRRQAQLETGLRQPGGIRVTEERELYSLRDQLQRNPQAVTAILQTARNLNRPIDTLRPQDVSGLG
Ga0311301_126002841	3300032160	Peatlands Soil	MDPIAEALDLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRPQDVCALG
Ga0311301_128960992	3300032160	Peatlands Soil	MEPITEALELLKRQAVLENGLRRAGGIRVTEERELYAVRERLQRYPQAVATILQMASNLHRPVDTLSSADLRNVS
Ga0316230_10619721	3300032668	Freshwater	SKRSIRRSVVEPIQEALQLLKRQAELETGLRQPGGIRVTAERELYALRDRLQRYPEAVTAILHAARNLNRPVDTLRPQDILGLE
Ga0334790_006862_2685_2912	3300033887	Soil	MDPIAEALDLLRRQAQLETGLRQPGGIRVTEERELYSLREQLQRYPQAVTAILQTARNLNRPVDTLRLQDVSGLG
Ga0334790_081723_272_505	3300033887	Soil	MPVDPITTALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVETLQPQDVRSLG
Ga0334792_000754_18501_18734	3300033888	Soil	MPVDPITTALDLLKRQAELETGLRQPGRARTTEERELYALRECLQRYPQAVTAILETARNLNRPVDTLQPQDVRSLG
Ga0370484_0058708_1_204	3300034125	Untreated Peat Soil	MEPITEALELLKRQAVLENGLRRAGGIRVTEERELYAVRAQLQRYPQAVAAILQMASNLHRPVDTLSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057420

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences