Metagenome / Metatranscriptome Family F056995

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056995
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	83 residues
Representative Sequence	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSP
Number of Associated Samples	103
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.81 %
% of genes from short scaffolds (< 2000 bps)	97.81 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (56.204 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (62.774 % of family members)
Environment Ontology (ENVO)	Unclassified (72.263 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (61.314 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.36% β-sheet: 10.71% Coil/Unstructured: 58.93%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF13228	DUF4037	3.65
PF03640	Lipoprotein_15	3.65
PF03454	MoeA_C	2.92
PF10590	PNP_phzG_C	2.19
PF13649	Methyltransf_25	1.46
PF08241	Methyltransf_11	0.73
PF02627	CMD	0.73
PF12697	Abhydrolase_6	0.73
PF06441	EHN	0.73
PF00196	GerE	0.73
PF04909	Amidohydro_2	0.73
PF12680	SnoaL_2	0.73
PF00872	Transposase_mut	0.73
PF00903	Glyoxalase	0.73
PF02738	MoCoBD_1	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	3.65
COG0303	Molybdopterin Mo-transferase (molybdopterin biosynthesis)	Coenzyme transport and metabolism [H]	2.92
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.73
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.73
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.73
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.20 %
Unclassified	root	N/A	43.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.20 %
Unclassified	root	N/A	43.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.20 %
Unclassified	root	N/A	43.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.45 %
Unclassified	root	N/A	43.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.26 %
Unclassified	root	N/A	43.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.80 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.15 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.80 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	34.31 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.46 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.73 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.80 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	34.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.73 %
Lichenicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.80 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	34.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Lichenicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	0.73 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.80 %
Actinospica durhamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	34.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.73 %
Lichenicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	0.73 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.80 %
Actinospica durhamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	34.31 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Streptomyces sp. uw30	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. uw30	0.73 %
Lichenicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	0.73 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10371122	Not Available	500	Open in IMG/M
3300005338\|Ga0068868_100834622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	834	Open in IMG/M
3300005363\|Ga0008090_14413262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	736	Open in IMG/M
3300005436\|Ga0070713_101025144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	796	Open in IMG/M
3300005518\|Ga0070699_100356289	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300005591\|Ga0070761_10598290	Not Available	686	Open in IMG/M
3300005712\|Ga0070764_10061294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1947	Open in IMG/M
3300005712\|Ga0070764_10144100	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300005764\|Ga0066903_108304527	Not Available	531	Open in IMG/M
3300006052\|Ga0075029_100650720	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300006176\|Ga0070765_100256725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1604	Open in IMG/M
3300006606\|Ga0074062_11468901	Not Available	555	Open in IMG/M
3300007076\|Ga0075435_101025339	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300010373\|Ga0134128_10424470	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300010375\|Ga0105239_10821559	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300016319\|Ga0182033_10012191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4914	Open in IMG/M
3300016319\|Ga0182033_11875456	Not Available	545	Open in IMG/M
3300016371\|Ga0182034_10564759	Not Available	956	Open in IMG/M
3300016422\|Ga0182039_11865960	Not Available	551	Open in IMG/M
3300016445\|Ga0182038_11427348	Not Available	620	Open in IMG/M
3300017966\|Ga0187776_11548406	Not Available	511	Open in IMG/M
3300017970\|Ga0187783_10862292	Not Available	653	Open in IMG/M
3300017972\|Ga0187781_10277754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1187	Open in IMG/M
3300017999\|Ga0187767_10111423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300018034\|Ga0187863_10696826	Not Available	573	Open in IMG/M
3300018058\|Ga0187766_10673034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300018060\|Ga0187765_10077947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1764	Open in IMG/M
3300021402\|Ga0210385_10360146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicoccus → Lichenicoccus roseus	1088	Open in IMG/M
3300021407\|Ga0210383_10756957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	833	Open in IMG/M
3300021407\|Ga0210383_10901273	Not Available	753	Open in IMG/M
3300021474\|Ga0210390_11521858	Not Available	529	Open in IMG/M
3300021477\|Ga0210398_11624627	Not Available	500	Open in IMG/M
3300021559\|Ga0210409_10824204	Not Available	801	Open in IMG/M
3300022734\|Ga0224571_108042	Not Available	715	Open in IMG/M
3300026023\|Ga0207677_12297483	Not Available	502	Open in IMG/M
3300027879\|Ga0209169_10075067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1748	Open in IMG/M
3300028020\|Ga0265351_1025106	Not Available	530	Open in IMG/M
3300028906\|Ga0308309_10485927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1066	Open in IMG/M
3300030740\|Ga0265460_12923866	Not Available	513	Open in IMG/M
3300031231\|Ga0170824_122029365	Not Available	1113	Open in IMG/M
3300031543\|Ga0318516_10724186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	564	Open in IMG/M
3300031544\|Ga0318534_10575027	All Organisms → cellular organisms → Bacteria → Terrabacteria group	641	Open in IMG/M
3300031546\|Ga0318538_10646364	Not Available	574	Open in IMG/M
3300031549\|Ga0318571_10102371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300031564\|Ga0318573_10407791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	730	Open in IMG/M
3300031572\|Ga0318515_10246390	Not Available	958	Open in IMG/M
3300031572\|Ga0318515_10251394	Not Available	948	Open in IMG/M
3300031640\|Ga0318555_10401939	Not Available	742	Open in IMG/M
3300031640\|Ga0318555_10546940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	627	Open in IMG/M
3300031680\|Ga0318574_10104103	Not Available	1576	Open in IMG/M
3300031680\|Ga0318574_10352044	Not Available	858	Open in IMG/M
3300031680\|Ga0318574_10520155	Not Available	697	Open in IMG/M
3300031680\|Ga0318574_10525019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	694	Open in IMG/M
3300031681\|Ga0318572_10544611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	691	Open in IMG/M
3300031682\|Ga0318560_10371274	All Organisms → cellular organisms → Bacteria → Terrabacteria group	773	Open in IMG/M
3300031713\|Ga0318496_10282419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300031719\|Ga0306917_11474886	Not Available	524	Open in IMG/M
3300031720\|Ga0307469_11949616	Not Available	569	Open in IMG/M
3300031723\|Ga0318493_10383456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	767	Open in IMG/M
3300031723\|Ga0318493_10540520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	646	Open in IMG/M
3300031736\|Ga0318501_10602619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	603	Open in IMG/M
3300031747\|Ga0318502_10242570	Not Available	1051	Open in IMG/M
3300031747\|Ga0318502_10447425	Not Available	771	Open in IMG/M
3300031748\|Ga0318492_10516318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	634	Open in IMG/M
3300031748\|Ga0318492_10598025	Not Available	588	Open in IMG/M
3300031751\|Ga0318494_10150148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1312	Open in IMG/M
3300031751\|Ga0318494_10834188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	540	Open in IMG/M
3300031751\|Ga0318494_10930208	Not Available	510	Open in IMG/M
3300031765\|Ga0318554_10280413	Not Available	948	Open in IMG/M
3300031765\|Ga0318554_10824723	Not Available	518	Open in IMG/M
3300031768\|Ga0318509_10525173	Not Available	661	Open in IMG/M
3300031768\|Ga0318509_10723409	Not Available	552	Open in IMG/M
3300031769\|Ga0318526_10418359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	548	Open in IMG/M
3300031770\|Ga0318521_10120407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1466	Open in IMG/M
3300031771\|Ga0318546_10182126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1428	Open in IMG/M
3300031771\|Ga0318546_10690452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	718	Open in IMG/M
3300031771\|Ga0318546_10939232	Not Available	609	Open in IMG/M
3300031777\|Ga0318543_10174052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	951	Open in IMG/M
3300031778\|Ga0318498_10072217	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300031778\|Ga0318498_10454855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	566	Open in IMG/M
3300031781\|Ga0318547_10274313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1020	Open in IMG/M
3300031781\|Ga0318547_10483184	Not Available	764	Open in IMG/M
3300031782\|Ga0318552_10020008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2955	Open in IMG/M
3300031792\|Ga0318529_10105611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1274	Open in IMG/M
3300031793\|Ga0318548_10478786	Not Available	609	Open in IMG/M
3300031794\|Ga0318503_10205229	Not Available	639	Open in IMG/M
3300031797\|Ga0318550_10440952	Not Available	630	Open in IMG/M
3300031798\|Ga0318523_10500405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	601	Open in IMG/M
3300031798\|Ga0318523_10505009	Not Available	598	Open in IMG/M
3300031799\|Ga0318565_10488319	Not Available	595	Open in IMG/M
3300031799\|Ga0318565_10576523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	541	Open in IMG/M
3300031805\|Ga0318497_10082931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1701	Open in IMG/M
3300031805\|Ga0318497_10380970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	788	Open in IMG/M
3300031819\|Ga0318568_10866118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	559	Open in IMG/M
3300031821\|Ga0318567_10416962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	761	Open in IMG/M
3300031821\|Ga0318567_10794096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	536	Open in IMG/M
3300031832\|Ga0318499_10407779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	520	Open in IMG/M
3300031845\|Ga0318511_10184785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	922	Open in IMG/M
3300031845\|Ga0318511_10255721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	786	Open in IMG/M
3300031859\|Ga0318527_10320895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	660	Open in IMG/M
3300031860\|Ga0318495_10148467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1057	Open in IMG/M
3300031890\|Ga0306925_10393585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1485	Open in IMG/M
3300031890\|Ga0306925_11751959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	597	Open in IMG/M
3300031896\|Ga0318551_10377372	Not Available	805	Open in IMG/M
3300031897\|Ga0318520_10078293	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300031910\|Ga0306923_10416167	Not Available	1528	Open in IMG/M
3300031910\|Ga0306923_10796862	Not Available	1044	Open in IMG/M
3300031910\|Ga0306923_11397033	Not Available	737	Open in IMG/M
3300031910\|Ga0306923_11415813	Not Available	731	Open in IMG/M
3300031912\|Ga0306921_11266419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	817	Open in IMG/M
3300031941\|Ga0310912_11319521	Not Available	547	Open in IMG/M
3300031954\|Ga0306926_10558078	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300031954\|Ga0306926_11454706	All Organisms → cellular organisms → Bacteria → Terrabacteria group	793	Open in IMG/M
3300031981\|Ga0318531_10506326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	547	Open in IMG/M
3300032001\|Ga0306922_12139579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	541	Open in IMG/M
3300032008\|Ga0318562_10361965	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300032008\|Ga0318562_10711799	Not Available	577	Open in IMG/M
3300032009\|Ga0318563_10649817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	567	Open in IMG/M
3300032010\|Ga0318569_10565887	Not Available	529	Open in IMG/M
3300032043\|Ga0318556_10481982	Not Available	649	Open in IMG/M
3300032044\|Ga0318558_10481529	Not Available	619	Open in IMG/M
3300032055\|Ga0318575_10504433	Not Available	614	Open in IMG/M
3300032060\|Ga0318505_10111630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1245	Open in IMG/M
3300032066\|Ga0318514_10475928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	664	Open in IMG/M
3300032067\|Ga0318524_10125579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	1285	Open in IMG/M
3300032068\|Ga0318553_10139368	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300032068\|Ga0318553_10506370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	633	Open in IMG/M
3300032076\|Ga0306924_10922856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	964	Open in IMG/M
3300032076\|Ga0306924_11484562	Not Available	719	Open in IMG/M
3300032089\|Ga0318525_10429987	Not Available	676	Open in IMG/M
3300032091\|Ga0318577_10202835	Not Available	948	Open in IMG/M
3300032261\|Ga0306920_100400421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. uw30	2041	Open in IMG/M
3300032261\|Ga0306920_102461352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	717	Open in IMG/M
3300032756\|Ga0315742_13207017	Not Available	528	Open in IMG/M
3300032893\|Ga0335069_10983741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica durhamensis	937	Open in IMG/M
3300033290\|Ga0318519_10148227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1309	Open in IMG/M
3300033290\|Ga0318519_10877750	Not Available	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.35%
Host-Associated	Host-Associated	3.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.89%
Plants	Host-Associated → Plants	3.65%
Aquatic	Environmental → Aquatic	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.46%
Freshwater	Environmental → Aquatic → Freshwater	0.73%
Sediment	Environmental → Aquatic → Sediment	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.21%
Loam	Environmental → Terrestrial → Soil → Loam	6.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.73%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	62.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103711221	3300001356	Peatlands Soil	MQHAQSRSRSLRWIGRVAMASLAALIAFGVSPALPALAGTWSAPVQLPGSCGSSVAVNQAGPMAVGGTFTAADGTTHVQVCTS
Ga0068868_1008346221	3300005338	Miscanthus Rhizosphere	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGTFTAADGTTHAQVCTSPDGKTWQAADLGPGGNEPHGGPH
Ga0008090_144132621	3300005363	Tropical Rainforest Soil	MHQARSCTRSLRWIGRGALAWLAGLVAFGVLPALPALAGSWSAPVQLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQATDLGPGGSEPHGG
Ga0070713_1010251442	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADLG
Ga0070699_1003562891	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADLGPGGNEPHGGPH
Ga0070761_105982901	3300005591	Soil	MQHAQSHAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVALPGPCGSSVAVNQAGAMAAGGTFT
Ga0070764_100612941	3300005712	Soil	MQHAQSRTRSRRWIGRGALVALAGAAVFGVWPALPALAASWSSPVALPGSCGSSVAVNQAGAM
Ga0070764_101441001	3300005712	Soil	MQHAQSRAGLRRWMGRGSLVGLAGLAVFGVSPALPALAASWSSPVTLPGACGSSVAVNQAGAMA
Ga0066903_1083045271	3300005764	Tropical Forest Soil	MQNAQTRARSRHWIGRAGLVSLAGLIAFGIQPAASALAGSWSSPVQLPGSCGSSVAVNRAGAMAAGGTF
Ga0075029_1006507201	3300006052	Watersheds	MQHAQSRARPLRWTGRGALALLAGLVAFGVSPALPALAGTWSAPVPLPGSCGNSVAVNQAGAMVAGGTFQAAGGTTHVQVCTSPDGKTWQA
Ga0070765_1002567253	3300006176	Soil	MQHAQSHAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVALPGPCGSSVAVNQAGAMAAGGTFTPS
Ga0074062_114689012	3300006606	Soil	MQHAQSRARSRRWIGRGGLASLAVLIAFGIQPVVPALAGSWSSPVQLPGACGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSP
Ga0075435_1010253393	3300007076	Populus Rhizosphere	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAG
Ga0134128_104244703	3300010373	Terrestrial Soil	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGTFTAADGTTHGQVCTSPDGKTWQAADLGPGG
Ga0105239_108215591	3300010375	Corn Rhizosphere	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGT
Ga0182033_100121915	3300016319	Soil	MRHAQSRAHLLRWIGRGALVSLTALIAFGVSPALPALAGSWSAPVQLPGSCGSSVAVNQAGAMVAGGTFTAADGTTHVQVC
Ga0182033_118754562	3300016319	Soil	MQHAHSRVRSRTWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTASDGTTHVQVCTSPNGT
Ga0182034_105647591	3300016371	Soil	MQHAQSRARSRRWIGRAGLASLAGLIAFGIQPAVPALAGSWSSPVQLPGSCGSSVAVNQAGAMAAGGTFTATDGTMHVQVCTSPD
Ga0182039_118659601	3300016422	Soil	MENAQSRTRSLRWIGRGTLVSAAALVALGVSPALPALAGTWSAPVQLPGPCGSSVAVNKAGAMVAGGTFQASGGTMHVEACTSPDGRTWQ
Ga0182038_114273481	3300016445	Soil	MQHAQWRVRSLTWLRRAGLASLAGLVTFGLSPALPALAGTWSAPVPLPGSCGSSVAVNQVGAMVAGGTFQAADGTTHIQL
Ga0187776_115484061	3300017966	Tropical Peatland	MQHAQSRARSRRWIGRGGLASLAALIAFGIQPAVPALAGSWSPPVQLPGSCGSSVAENQAGAMAAGGTFT
Ga0187783_108622922	3300017970	Tropical Peatland	MQHAHSRAHLGRWIGRGALGASAGLAMFGVSPALPALAATWSSPVQLPGPCGSSVAVNQTGAMAASGTFTTSGCTTNVEVCSSPNGQTWQAA
Ga0187781_102777541	3300017972	Tropical Peatland	MQQHPQSRAHLGRWIGRGALVTLGGLAVFGLQGALPALAASWSAPVALPGPCGSSVAVNQAGDMAAGGTFTASGGTTNVEVCTSTN
Ga0187767_101114232	3300017999	Tropical Peatland	MQHTQSRVRPLKWAGRGGLTVLAALFALGISPALPALAGTWSAPVGLPGPCFCTVRVHQGGTMAAARTSTASAATRDVQ
Ga0187863_106968261	3300018034	Peatland	MQHAQSRPRSRRWIGRGGLASLAGLIAFAALPALPALAASWSSPVQLPGSCGSSVSVNQAGAMAAG
Ga0187766_106730341	3300018058	Tropical Peatland	MQHTQSRVRPLTWISRGGLALLGGLAALAMSPALPALAGTWSAPVGLPGPCGSSVAVNQAGAMAAGGTFTASDGTTHVQVCTS
Ga0187765_100779473	3300018060	Tropical Peatland	MQHAQLRVRPLKWAGLGGLTVLATLAALGVSPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTF
Ga0210385_103601462	3300021402	Soil	MQHAQSRAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVTLPGSCGSSVAVNQAGAMAAGGTFTPSGGTLQVDVCTST
Ga0210383_107569571	3300021407	Soil	MQHAQSRTHSRRWIGRGALVALAGAAVFGVSPVLPALAGSWSSPVQLPGSCGSSVAVNQAGAMAAGGTFTA
Ga0210383_109012731	3300021407	Soil	MQHAQSRAGLRRWMGRGSLVGLAGLAVFGVSPALPALAASWSSPVTLPGPCGSSVAVNQAGAMAAGGTFTPSGGILQVEV
Ga0210390_115218581	3300021474	Soil	MQHAQSRAGLRRWMGRGSLVGLAGLAVFGVSPALPALAASWSSPVTLPGACGSSVAVNQAGAMAAGGTFTPSGGTLQVEVCT
Ga0210398_116246271	3300021477	Soil	MQHAQSRAGLRRWMGRGSLVGLAGLAVFGVSPALPALAASWSSPVTLPGACGSSVAVNQAGAMAAGGTFTPSGGTLQVEVCTSTNGTTWQATDLG
Ga0210409_108242041	3300021559	Soil	MQHAQSRARSRRWIGRGALAALAGLVAFGVSPALPALAGSWSTPIQLPGSCGGSVAVNQAGAMAAGGT
Ga0224571_1080421	3300022734	Rhizosphere	MQHAQSRAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVTLPGPCGSSVAVNQAGAMAAGGTFTASDGTTH
Ga0207677_122974831	3300026023	Miscanthus Rhizosphere	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGTFTAADGT
Ga0209169_100750673	3300027879	Soil	MQHAQSRAGLRRWMGRGSLVGLAGLAVFGVSPALPALAASWSSPVTLPGACGSSVAVNQAGA
Ga0265351_10251061	3300028020	Soil	MQHAQSRAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVTLPGPCGSSVAVNQAGAMAAGGTFTASNGTLQVEVCTSTNGTSWQATDLGPGG
Ga0308309_104859271	3300028906	Soil	MQHAQSHAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVALPGPCGSSVAVNQAGAMAAGGTF
Ga0265460_129238662	3300030740	Soil	MQHAQSRARSRRWIGRAALVALTGLAVFGVSPVLPALAASWSSPVSLPGSCGNSVAVNQAGAMAAGGIFTAND
Ga0170824_1220293651	3300031231	Forest Soil	MQHAPSRARSRRWIARGGLASVAALIAFGIQPAVPALAGTWSSPVQLPGSCGSSVAVNQAGAMAAGGTF
Ga0318516_107241862	3300031543	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQVCTSPD
Ga0318534_105750271	3300031544	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAAD
Ga0318538_106463641	3300031546	Soil	MQQAQSRARSRRWIGRGALVSLAALVAFGVSPALPALAGSWSAPVPLPGSCGSSVAVNQAGAMVAGGTFT
Ga0318571_101023712	3300031549	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTM
Ga0318573_104077912	3300031564	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQVCTSPDGKTWQAADLGPGGDQPH
Ga0318515_102463901	3300031572	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSMHVQVCTSPDGK
Ga0318515_102513941	3300031572	Soil	MRQARSRTRSVRWIGRGALAWLAGLVAFGISPALPALAGSWSAPVPLPGSCGSSVEVNGAGAMVAGGTFQVNGA
Ga0318555_104019391	3300031640	Soil	MQHAQSRTRSLRWFGRGALVLTAVLVAFGVSPALPALAGSWSAPVQLPGSCGSSVAVNQAGAMVAGGTFTAADGTTHVQVC
Ga0318555_105469401	3300031640	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAFGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCASPDGKTWQAADLGP
Ga0318574_101041033	3300031680	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTF
Ga0318574_103520442	3300031680	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSMHVQVCTSPDGTTWQ
Ga0318574_105201551	3300031680	Soil	MQHVQSGARSLRWVGRGALASLAALVAFGVSPALPALAGSWSSPVQLPGSCGSSVAVNQAGAMVAGGT
Ga0318574_105250192	3300031680	Soil	MHHARSRTCSVKWIGRGVLAWLAGLIAFGVSPALPALAGTWSAPVQLPGSCGSSVAVNQAGAMAAGGTFQAADGTTHVQACTSPDGKTWQATDLGPGGTEPHGPR
Ga0318572_105446112	3300031681	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQVCTSPDGKTWQAAD
Ga0318560_103712741	3300031682	Soil	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGT
Ga0318496_102824192	3300031713	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTMHVQVCTSPD
Ga0306917_114748861	3300031719	Soil	MQHAQSRVRPLTWISRGGLGLLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFT
Ga0307469_119496161	3300031720	Hardwood Forest Soil	MQHAPSRARSRRWIARGGLASLIALIAFAIQPAVPALAGTWSSPVQLPGSCGSSVTVNQAGAMAAGGTFTA
Ga0318493_103834561	3300031723	Soil	MQHAQSRARSRRWIVRAGLASLAGLIAFGVQQPLPAQAGSWSGPVQLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGRTW
Ga0318493_105405202	3300031723	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQVCTSPDGKTWQAADLGPGGDQ
Ga0318501_106026192	3300031736	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQVCTSPDG
Ga0318502_102425701	3300031747	Soil	MQHAQWRVRSLTWLRRAGLASLAGLVTFGLSPALPALAGTWSAPVPLPGSCGSSVAVNQVGAMVAGGTFQAADG
Ga0318502_104474251	3300031747	Soil	MQHAQSRARSRRWIVRAGLASLAGLIAFGVQQPLPAQAGSWSGPVQLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQV
Ga0318492_105163181	3300031748	Soil	MHHARSRTRSVKWIGRGVLAWLAGLIAFGVSPALPALAGTWSAPVQLPGSCGSSVAVNQAGAMAAGGTFQAADGTTHVQACTSPDGKTWQATDLGPGGTEPH
Ga0318492_105980251	3300031748	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGT
Ga0318494_101501481	3300031751	Soil	MQHAQSRARSRRWIGRAGLASLAGLIAFGVQQPLPARAGSWSGPVQLPGSCGSSVAVNQAGATFAGGTFTAADGTTHVQVCTSPDGKTWQ
Ga0318494_108341881	3300031751	Soil	MRHAQSRERSLKWLGRAGLGSLAALVAFGVSPALPALAGTWSAPVQLPGPCGNSLAVNRAGAMAAGGTFTAADGTTHVEVCTSPDGKTWQATDLGPGGDEPHGGQHP
Ga0318494_109302081	3300031751	Soil	MHHARSRTRSLRWIGRGAVASLAGLVAFGVSPALPALAGTWSAPVPLPGSCGSAVAVNQAGAMVPGGTF
Ga0318554_102804131	3300031765	Soil	MQNAHTRARSRRWIGRAGLVSLAGVIAFGMQPAASALAGSWSSPVQLPGSCGSSVAVNQAGAMAAGGTFTATDGTMHVQVCTSPDGK
Ga0318554_108247231	3300031765	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFT
Ga0318509_105251732	3300031768	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAFGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFT
Ga0318509_107234091	3300031768	Soil	MQQAQSHKRPQTWVSRGGLALLAGLVVFGLSPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQV
Ga0318526_104183591	3300031769	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCT
Ga0318521_101204071	3300031770	Soil	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGNTWQAADLG
Ga0318546_101821261	3300031771	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADGSTHVQVCTSPDGTTWQPADLGPGGDEPHGGQ
Ga0318546_106904521	3300031771	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAFGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADLGPGGNEPHGGPTAT
Ga0318546_109392322	3300031771	Soil	MQQAQSHKRPQTWVSRGGLALLAGLVVFGLSPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPD
Ga0318543_101740521	3300031777	Soil	MQHAHSRVRSRTWVSRGGLALLAGLVAFGISPALPALAGTWSAPVSPPGSCGSSVAVNQAGAMAVGGTFTAADGTTHVQVCTSPDGKTWQ
Ga0318498_100722171	3300031778	Soil	MQQAQSRARSRRWIGRGALVSPAALVAFGVSPALPALAGSWSAPVPLPGSCGSSVAVNQVGAMVAGGTFRAADGTTHVQVCTSPDGTTWQAADLGP
Ga0318498_104548551	3300031778	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSMHVQVCTSPDGKTWQAADLGPGG
Ga0318547_102743132	3300031781	Soil	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGNTWQAADLGPGGNEPHGGPHPAVRLI
Ga0318547_104831841	3300031781	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADG
Ga0318552_100200082	3300031782	Soil	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSMHVQVCTSPDGKTWQAAQARSRTRPGLPATPGHLG
Ga0318529_101056112	3300031792	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAFGIQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAAD
Ga0318548_104787861	3300031793	Soil	MQHAQWRVRSLTWLRRAGLASLAGLVTFGLSPALPALAGTWSAPVPLPGSCGSSVAVNQVGAMVAGGTFQAADGTTHVQL
Ga0318503_102052291	3300031794	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADG
Ga0318550_104409522	3300031797	Soil	MQHAHSRVRSRTWVSRGGLALLAGLVAFGISPALPALAGTWSAPVSPPGSCGSSVAVNQAGAMAVGGTFTAADGTTHVQVCTSPDGK
Ga0318523_105004051	3300031798	Soil	MQHAQSRARSQRWIGRTGLASLAGLIAFGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADL
Ga0318523_105050091	3300031798	Soil	MQHAQSHARSRRWIGRTGLASLAGLIAFGIQPALPAQAGSWSGPVQLPGSCGSSVAVNQAGAMAAGGTFTAADG
Ga0318565_104883191	3300031799	Soil	MQHAQSRTRSLRWTGRGAVALLAGLVAVGVSPALPALAGSWSAPVQLPGSCGSSLAVNRAGAMVAGGTF
Ga0318565_105765231	3300031799	Soil	MQHAQSRARSRRWIVRAGLASLAGLIAFGVQQPLPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADLG
Ga0318497_100829311	3300031805	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADGSTHVQVCTSPD
Ga0318497_103809702	3300031805	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSMHVQVCTSPDGKTWQAADLG
Ga0318568_108661181	3300031819	Soil	MQHAQSRAHSRRWIGRGSLALLAGLIAFGVQPALPALAGTWSGPLQLPGSCGSSVAVNRAGAMVAGGTFTAADGTTHVQVCTSPDGKT
Ga0318567_104169621	3300031821	Soil	MQHAQSRARSRRWIGRAGLASLAGLIAFGVQQPLPARAGSWSGPVQLPGSCGSSVAVNQAGATFAGGTFTAADGTTHVQVCTSPDGKT
Ga0318567_107940962	3300031821	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGNTWQAADLGP
Ga0318499_104077791	3300031832	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSTHVQVCTSPDGKTWQAADLGPGGD
Ga0318511_101847851	3300031845	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADGSTHVQVCTS
Ga0318511_102557212	3300031845	Soil	MQHAHSRVRSRTWVSRGGLALLAGLVAFGISPALPALAGTWSAPVSPPGSCGSSVAVNQAGAMAVGGTFTAADGTTHVQVCTSPDGKTWQAADLGPGGNE
Ga0318527_103208951	3300031859	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSPDGK
Ga0318495_101484671	3300031860	Soil	MQHAQSRARSRRWIVRAGLASLAGLIAFGVQQPLPAQAGSWSGPVQLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGRTWQAAD
Ga0306925_103935851	3300031890	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADGSTHVQVCTSPDGTTWQPADL
Ga0306925_117519591	3300031890	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAA
Ga0318551_103773721	3300031896	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGVTFTAADGSTHVQ
Ga0318520_100782931	3300031897	Soil	MQQAQSRARSRRWIGRGALVSLAALVAFGVSPALPALAGSWSAPVPLPGSCGSSVAVNQAGAMVAGGTF
Ga0306923_104161671	3300031910	Soil	MQHAQSRVRPLTWISRGGLGLLAGLVAFGISPALPALAGTWSGPLSLPGSCGSSVAVNQA
Ga0306923_107968621	3300031910	Soil	MENAQSRTRSLRWIGRGTLVSAASLVALGVSPALPALAGTWSAPVQLPGPCGSSVAVNKAGAMVAGGTFQASGGTMHV
Ga0306923_113970331	3300031910	Soil	MQHAQSRARSRRWIGRAGLASLAGLIAFGVQQPLPARAGSWSGPVQLPGSCGSSVAVNQAGATF
Ga0306923_114158131	3300031910	Soil	MQHAQWRVRSLTWLRRAGLASLAGLVTFGLSPALPALAGTWSAPVPLPGSCGSSVAVNQVGAMVAGGTFQAADGTTHVQLCASPDGKTWQAAD
Ga0306921_112664191	3300031912	Soil	MRQARSRTRSVRWIGRGALAWLAGLVAFGISPALPALAGSWSAPVPLPGSCGSSVEVNGAGAMVAGGTFQVNGATHVQVCTSPDGKTWQAADLGP
Ga0310912_113195211	3300031941	Soil	MQHVQSRAGSLRWVGRGALASLAALVAFGVSPALPALAGSWSAPVQLPGSCGSSVAENPAGAMVAGGT
Ga0306926_105580781	3300031954	Soil	MPQAQSPARARKWIGRGGLAVLAGLVAFGVSPALPALAGSWSAPVQLPGSCGSSATVNQAGAMAAGGTFKA
Ga0306926_114547061	3300031954	Soil	MQHAQSRVRPLTWISRGGLGLLAGLVAFGISPALPALAGTWSAPVSLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHV
Ga0318531_105063261	3300031981	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQ
Ga0306922_121395791	3300032001	Soil	MQHAQSRARSRRWIVRAGLASLAGLIAFGVQQPLPAQAGSWSGPVQLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGRTWQAADLGPGGNEPHG
Ga0318562_103619651	3300032008	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVN
Ga0318562_107117991	3300032008	Soil	MQHAQSHARSRRWIGRTGLASLAGLIAFGIQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTT
Ga0318563_106498171	3300032009	Soil	MQHAQSHARSRRWIGRTGLASLAGLIAFGIQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADLGPGGNEPHDPGSC
Ga0318569_105658871	3300032010	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQVC
Ga0318556_104819821	3300032043	Soil	MQHAQSRVRSLIWLSRAGLASLAGLVAFGLSPALPALAGTWSAPVPLPGSCGSSVAVNQVGAMVAGGTFQAADGTTHVQL
Ga0318558_104815291	3300032044	Soil	MQHAQSRVRPLTWISRGGLGLLAGLVTFGISPALPALAGTWSAPVSLPGSCGSSVAVNQAGAM
Ga0318575_105044331	3300032055	Soil	MQHAQSRARSRRWIGRTGLASLAGLIAYGVQPALPAQAGSWSGPVQLPGSCGSSVAVNRAGAMAAGGTFTAADGTTH
Ga0318505_101116302	3300032060	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADGSTHVQVCTSPDG
Ga0318514_104759282	3300032066	Soil	MQHAQSRVRTRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGSTHVQDCTSPDGK
Ga0318524_101255792	3300032067	Soil	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGNTWQAADLGP
Ga0318553_101393681	3300032068	Soil	MQHAQSRVRSRKWVSRGGLALLAGLVAFGISPALPALAGTWSAPVTLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSP
Ga0318553_105063701	3300032068	Soil	MPQAQSPARARKWIGRGGLAVLAGLVAFGVSPALPALAGSWSSPVQLPGSCGSSVATNKAGAMAAGGTFKAADGSTHVQVCTSPDGKTWQATDLG
Ga0306924_109228561	3300032076	Soil	MQHAQSRARSRRWIGRGALASLAGLVAFGVQPALPALAGSWSSPVQLPGSCGSSLAVNRTGAMAAGGTFTAADGSTHVQVCTSPDGTTWQPADLGPGGDE
Ga0306924_114845622	3300032076	Soil	MQYAQSHARSRRWIGRGALVTLAGLAVFGVSPALPALAGTWSAPVQLPGPCGSSVAVNKAGAMVAGGTFQ
Ga0318525_104299871	3300032089	Soil	MQHAQSRTRSLRWFGRGALVLTAVLVAFGVSPALPALAGSWSAPVQLPGSCGSSVAVNQAGAMVAGGTFT
Ga0318577_102028352	3300032091	Soil	MQHAQSRVRPLTWVSRGGLALLAGLVAFGISPALPALAGTWPAPVTLPGSCGSSVAENQAGAMAAGGTFTAADGSMHVQVC
Ga0306920_1004004211	3300032261	Soil	MRQARSRTRSVRWIGRGALAWLAGLVAFGISPALPALAGSWSAPVPLPGSCGSSVEVNGAGAMVAGGTFQVNGATHVQVCTSPDG
Ga0306920_1024613521	3300032261	Soil	MQHAQSRVRPLTWISRGGLGLLAGLVAFGISPALPALAGTWSAPVSLPGSCGSSVAVNQAGAMAAGGTFTAADGTTHVQVCTSPDGKTWQAADLGPGGNEPHGGPHP
Ga0315742_132070171	3300032756	Forest Soil	MQHAQSRAGLRRWMGRGSLVALAGLAVFGVSPALPALAASWSSPVGLPGSCGSSVAVNQAGAMAAGGTF
Ga0335069_109837411	3300032893	Soil	MQRAQSRLPSMRWIGRGAVALLAGLIAVGVSPALPALAGTWSAPVGLPGSCGSSLAVNQAGAMAVGGTFTASDGTTHVQVCTSPDGKTWQAADLGQGGNTPS
Ga0318519_101482272	3300033290	Soil	MQHAQSRARSRRWIVRAGLASLAGLIAFGVQQPLPAQAGSWSGPVQLPGSCGSSVAVNQAGAMAAGG
Ga0318519_108777501	3300033290	Soil	MQHAQSRAHSRRWIGRGSLALLAGLIAFGVQPALPALAGTWSGPLQLPGSCGSSVAVNRAGAMVAGGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056995

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences