Metagenome / Metatranscriptome Family F056929

Basic Information
Family ID	F056929
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	52 residues
Representative Sequence	MRTIAYALALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDATTNTCAAKQ
Number of Associated Samples	109
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.12 %
% of genes near scaffold ends (potentially truncated)	38.69 %
% of genes from short scaffolds (< 2000 bps)	90.51 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Unclassified (63.504 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.058 % of family members)
Environment Ontology (ENVO)	Unclassified (32.117 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.854 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 38.75% β-sheet: 10.00% Coil/Unstructured: 51.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF09361	Phasin_2	9.49
PF17200	sCache_2	2.92
PF04226	Transgly_assoc	2.19
PF03884	YacG	0.73
PF00072	Response_reg	0.73
PF00215	OMPdecase	0.73
PF00106	adh_short	0.73
PF00196	GerE	0.73
PF07369	DUF1488	0.73
PF00753	Lactamase_B	0.73
PF04072	LCM	0.73
PF03781	FGE-sulfatase	0.73
PF07332	Phage_holin_3_6	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.19
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG3024	Endogenous inhibitor of DNA gyrase, YacG/DUF329 family	Replication, recombination and repair [L]	0.73
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
All Organisms	root	All Organisms	36.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
cellular organisms	root	All Organisms → cellular organisms	36.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.84 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.38 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.84 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	4.38 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.84 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.73 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.50 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.84 %
Hyphomicrobium sp. 99	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	0.73 %
Mesorhizobium sp. WSM2561	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. WSM2561	0.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16530199	Not Available	1050	Open in IMG/M
2170459014\|G1P06HT02FW8PJ	Not Available	530	Open in IMG/M
2170459017\|G14TP7Y02GUA3Q	Not Available	582	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101573056	Not Available	570	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101573602	Not Available	531	Open in IMG/M
3300000891\|JGI10214J12806_12032351	Not Available	719	Open in IMG/M
3300000955\|JGI1027J12803_106114265	Not Available	692	Open in IMG/M
3300001977\|JGI24746J21847_1048611	Not Available	595	Open in IMG/M
3300004114\|Ga0062593_102086909	Not Available	632	Open in IMG/M
3300004157\|Ga0062590_100455841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300004479\|Ga0062595_100114479	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300004479\|Ga0062595_101263013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300004633\|Ga0066395_10056946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1752	Open in IMG/M
3300004643\|Ga0062591_101453625	Not Available	683	Open in IMG/M
3300004801\|Ga0058860_10144134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1685	Open in IMG/M
3300005332\|Ga0066388_100216958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2541	Open in IMG/M
3300005332\|Ga0066388_100795193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1539	Open in IMG/M
3300005332\|Ga0066388_107463317	Not Available	549	Open in IMG/M
3300005332\|Ga0066388_107655275	Not Available	541	Open in IMG/M
3300005366\|Ga0070659_100564198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300005367\|Ga0070667_100090765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	2626	Open in IMG/M
3300005406\|Ga0070703_10013422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. WSM2561	2327	Open in IMG/M
3300005434\|Ga0070709_10110718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1845	Open in IMG/M
3300005435\|Ga0070714_100906453	Not Available	856	Open in IMG/M
3300005435\|Ga0070714_101155559	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005436\|Ga0070713_100658024	Not Available	998	Open in IMG/M
3300005436\|Ga0070713_101247448	Not Available	720	Open in IMG/M
3300005437\|Ga0070710_11420065	Not Available	519	Open in IMG/M
3300005455\|Ga0070663_101937923	Not Available	530	Open in IMG/M
3300005547\|Ga0070693_100534328	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300005713\|Ga0066905_100221492	Not Available	1431	Open in IMG/M
3300005713\|Ga0066905_100832860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	802	Open in IMG/M
3300005713\|Ga0066905_101184101	Not Available	682	Open in IMG/M
3300005764\|Ga0066903_101328577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1345	Open in IMG/M
3300005764\|Ga0066903_101412310	Not Available	1308	Open in IMG/M
3300005764\|Ga0066903_106624833	Not Available	603	Open in IMG/M
3300006049\|Ga0075417_10120057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1206	Open in IMG/M
3300006058\|Ga0075432_10343546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	631	Open in IMG/M
3300006163\|Ga0070715_10582524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	653	Open in IMG/M
3300006163\|Ga0070715_10755688	Not Available	586	Open in IMG/M
3300006173\|Ga0070716_100435034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	952	Open in IMG/M
3300006175\|Ga0070712_100319284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1262	Open in IMG/M
3300006196\|Ga0075422_10355725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300006804\|Ga0079221_10750530	Not Available	690	Open in IMG/M
3300006804\|Ga0079221_11107315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	607	Open in IMG/M
3300006806\|Ga0079220_11955199	Not Available	522	Open in IMG/M
3300006844\|Ga0075428_101745864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	649	Open in IMG/M
3300006845\|Ga0075421_100498770	Not Available	1447	Open in IMG/M
3300006845\|Ga0075421_101469858	Not Available	747	Open in IMG/M
3300006847\|Ga0075431_102157820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	512	Open in IMG/M
3300006854\|Ga0075425_100807701	Not Available	1075	Open in IMG/M
3300006854\|Ga0075425_101180934	Not Available	870	Open in IMG/M
3300006903\|Ga0075426_11282004	Not Available	556	Open in IMG/M
3300006954\|Ga0079219_10539126	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300006954\|Ga0079219_11003276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	693	Open in IMG/M
3300009011\|Ga0105251_10523921	Not Available	556	Open in IMG/M
3300009094\|Ga0111539_10940385	Not Available	1005	Open in IMG/M
3300009100\|Ga0075418_13121094	Not Available	505	Open in IMG/M
3300009147\|Ga0114129_11649914	Not Available	783	Open in IMG/M
3300009148\|Ga0105243_11238926	Not Available	761	Open in IMG/M
3300009162\|Ga0075423_11000139	Not Available	888	Open in IMG/M
3300010048\|Ga0126373_10033532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4460	Open in IMG/M
3300010358\|Ga0126370_10011875	All Organisms → cellular organisms → Bacteria	4701	Open in IMG/M
3300010361\|Ga0126378_11069862	Not Available	908	Open in IMG/M
3300010366\|Ga0126379_10028946	All Organisms → cellular organisms → Bacteria	4291	Open in IMG/M
3300010371\|Ga0134125_11077620	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300010376\|Ga0126381_104785705	Not Available	521	Open in IMG/M
3300010396\|Ga0134126_11030855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	920	Open in IMG/M
3300010396\|Ga0134126_12286524	Not Available	589	Open in IMG/M
3300010398\|Ga0126383_12668136	Not Available	583	Open in IMG/M
3300012212\|Ga0150985_109292336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1645	Open in IMG/M
3300012897\|Ga0157285_10078234	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300012899\|Ga0157299_10090010	Not Available	774	Open in IMG/M
3300012901\|Ga0157288_10032401	Not Available	1099	Open in IMG/M
3300012903\|Ga0157289_10306813	Not Available	563	Open in IMG/M
3300012908\|Ga0157286_10118442	Not Available	803	Open in IMG/M
3300012908\|Ga0157286_10468503	Not Available	504	Open in IMG/M
3300012912\|Ga0157306_10021291	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300012913\|Ga0157298_10130050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	726	Open in IMG/M
3300012914\|Ga0157297_10350317	Not Available	574	Open in IMG/M
3300012948\|Ga0126375_10950866	Not Available	695	Open in IMG/M
3300012948\|Ga0126375_11611369	Not Available	559	Open in IMG/M
3300012957\|Ga0164303_10763756	Not Available	660	Open in IMG/M
3300012961\|Ga0164302_11427176	Not Available	566	Open in IMG/M
3300012986\|Ga0164304_10739277	Not Available	752	Open in IMG/M
3300012989\|Ga0164305_11951239	Not Available	534	Open in IMG/M
3300013096\|Ga0157307_1067768	Not Available	701	Open in IMG/M
3300013297\|Ga0157378_11178150	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300014325\|Ga0163163_12323899	Not Available	595	Open in IMG/M
3300014823\|Ga0120170_1017841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2063	Open in IMG/M
3300015077\|Ga0173483_10234017	Not Available	865	Open in IMG/M
3300015200\|Ga0173480_10046209	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300015371\|Ga0132258_11439367	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300015372\|Ga0132256_103319660	Not Available	541	Open in IMG/M
3300015373\|Ga0132257_101474741	Not Available	867	Open in IMG/M
3300015373\|Ga0132257_103239609	Not Available	593	Open in IMG/M
3300016270\|Ga0182036_11675501	Not Available	536	Open in IMG/M
3300016294\|Ga0182041_10449591	Not Available	1107	Open in IMG/M
3300016445\|Ga0182038_10145741	Not Available	1799	Open in IMG/M
3300017792\|Ga0163161_11070991	Not Available	692	Open in IMG/M
3300017947\|Ga0187785_10025994	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300017947\|Ga0187785_10300938	Not Available	737	Open in IMG/M
3300018032\|Ga0187788_10095515	Not Available	1069	Open in IMG/M
3300018032\|Ga0187788_10408140	Not Available	572	Open in IMG/M
3300018064\|Ga0187773_10165065	Not Available	1154	Open in IMG/M
3300018089\|Ga0187774_10335222	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300019356\|Ga0173481_10014129	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300019356\|Ga0173481_10704605	Not Available	546	Open in IMG/M
3300019361\|Ga0173482_10082478	Not Available	1128	Open in IMG/M
3300019361\|Ga0173482_10157167	Not Available	892	Open in IMG/M
3300019362\|Ga0173479_10149170	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300019362\|Ga0173479_10862850	Not Available	508	Open in IMG/M
3300020080\|Ga0206350_11118469	Not Available	536	Open in IMG/M
3300020081\|Ga0206354_10605838	Not Available	770	Open in IMG/M
3300020082\|Ga0206353_12006856	Not Available	628	Open in IMG/M
3300021560\|Ga0126371_10203697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2075	Open in IMG/M
3300021560\|Ga0126371_11789964	Not Available	736	Open in IMG/M
3300022883\|Ga0247786_1110366	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300023064\|Ga0247801_1020004	Not Available	900	Open in IMG/M
3300025899\|Ga0207642_10034539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2151	Open in IMG/M
3300025909\|Ga0207705_11374699	Not Available	537	Open in IMG/M
3300025912\|Ga0207707_10398905	Not Available	1181	Open in IMG/M
3300025919\|Ga0207657_11432397	Not Available	518	Open in IMG/M
3300025929\|Ga0207664_11564722	Not Available	581	Open in IMG/M
3300025934\|Ga0207686_10397175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1049	Open in IMG/M
3300025939\|Ga0207665_10715337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300027548\|Ga0209523_1072952	Not Available	708	Open in IMG/M
3300027907\|Ga0207428_10269545	Not Available	1266	Open in IMG/M
3300027907\|Ga0207428_10874745	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300028809\|Ga0247824_11075536	Not Available	513	Open in IMG/M
3300031573\|Ga0310915_10920193	Not Available	612	Open in IMG/M
3300031879\|Ga0306919_10876110	Not Available	689	Open in IMG/M
3300031912\|Ga0306921_11247876	Not Available	825	Open in IMG/M
3300031954\|Ga0306926_11202761	Not Available	890	Open in IMG/M
3300032076\|Ga0306924_11581946	Not Available	692	Open in IMG/M
3300032261\|Ga0306920_100228142	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.26%
Host-Associated	Host-Associated	26.28%
Engineered	Engineered	1.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.26%
Plants	Host-Associated → Plants	25.55%
Solid Waste	Engineered → Solid Waste	1.46%
Human	Host-Associated → Human	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.11%
Grass	Engineered → Solid Waste → Grass	1.46%
Digestive System	Host-Associated → Human → Digestive System	0.73%
Roots	Host-Associated → Plants → Roots	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.18%
Loam	Environmental → Terrestrial → Soil → Loam	19.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.19%
Composting	Engineered → Solid Waste → Grass → Composting	1.46%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.19%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.46%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.06%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.46%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02162940	2088090014	Soil	MRTIAYALALALGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
2PV_00511260	2170459014	Switchgrass, Maize And Mischanthus Litter	MRTIAYTLALALGVAFATSAFAGDVTMAKAKADCDKAGGAWDARTNTVQVEDVALDRN
4ZMR_04114130	2170459017	Switchgrass, Maize And Mischanthus Litter	MRTIAYTLALALGVAFATSAFAQDVSAAKTKANCDKAGGMWDAATNTCKAKQ
INPhiseqgaiiFebDRAFT_1015730562	3300000364	Soil	MRTIAYTLALVLGVAFAMSAFAGDVTMAKTKADCDKAGGMWDAATNTCKAKQ*
INPhiseqgaiiFebDRAFT_1015736021	3300000364	Soil	MRTIAYALALALGVAFATSAFAXDVXXAXTXADCDKAGGMWDAATNTCXAKQ*
JGI10214J12806_120323512	3300000891	Soil	MRTMAYTLALALGVAFATSAFAGDVTMAKTKADCDKAGGMWDTTTNTCKAKQ*
JGI1027J12803_1061142651	3300000955	Soil	MRTIAYTLALALGVAFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCK
JGI24746J21847_10486111	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	RKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0062593_1020869091	3300004114	Soil	MRTMAYTLALALGVAFATSAFAGDVTMAKTKADCDKAGGMWDTT
Ga0062590_1004558411	3300004157	Soil	MRTIAYALALALGVAFATSAFAQDVSAAKTKADCDKAGGMWDTATSTCKAKQ
Ga0062595_1001144792	3300004479	Soil	MKSIAYALAMILGVAFANSAFAADVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0062595_1012630132	3300004479	Soil	MRTIAYALALALGVAFATSAFAQDVSTAKTKADCDKAGGMWDAATNTCKAKQ*
Ga0066395_100569464	3300004633	Tropical Forest Soil	MSTAYPLALALGVALATSAVAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0062591_1014536251	3300004643	Soil	MRTIAYALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0058860_101441341	3300004801	Host-Associated	TGRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0066388_1002169582	3300005332	Tropical Forest Soil	MRTIAYTLALALGVAFATSAFAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0066388_1007951933	3300005332	Tropical Forest Soil	MRTIAYALALALGVVFATSAFAADVTTAKTKADCDKAGGVWDATTNTCKSKM*
Ga0066388_1074633171	3300005332	Tropical Forest Soil	MKIIFSTLALALALAFSGPAFAAEPVATAKTKDDCQKAGGVWNAGTN
Ga0066388_1076552751	3300005332	Tropical Forest Soil	MRTIAYALALALGFAFATSAFAGDVTMAKTKDDCDKAGGVWDAASNTCKPKM*
Ga0070659_1005641983	3300005366	Corn Rhizosphere	ALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0070667_1000907652	3300005367	Switchgrass Rhizosphere	MRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0070703_100134221	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATS
Ga0070709_101107184	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIAYALALALGVAFATSAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0070714_1009064531	3300005435	Agricultural Soil	MRTFAYVLALALGVAFATSAVAADLSKIKTKADCDKAGGVWSASTNTCMGKM*
Ga0070714_1011555591	3300005435	Agricultural Soil	MRTIAYALALALGVAFATSAFAADVTTAKTKDDCDKAGGVWDATT
Ga0070713_1006580241	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIAYALALALGVAFATSAFAGDVTMAKTKDDCDKAGGVWDASSNTCKPKM*
Ga0070713_1012474483	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ALALGVAFAASAFAADVSTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0070710_114200651	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	ALALALGVAFATSAFAADVTTAKTKDDCDKAGGVWDATTNTCKPKM*
Ga0070663_1019379232	3300005455	Corn Rhizosphere	CISTGRKPMRTIAYTLALALGVAFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM
Ga0070693_1005343281	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	TRRKPMRTIAYALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0066905_1002214922	3300005713	Tropical Forest Soil	MRTIAYALALALGVAFATSAFAGDVSTAKTKADCDKAGGIWNASTNTCKSKM*
Ga0066905_1008328602	3300005713	Tropical Forest Soil	MSTAYPLALALGVALATSAVAADVTTAKTKADCDKAGGMWDASTNTCKSKCSFAYC*
Ga0066905_1011841012	3300005713	Tropical Forest Soil	MRIIAYALALALGVAFATSAFAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0066903_1013285773	3300005764	Tropical Forest Soil	MRTIAYALALTLGVAFATSAFAADLSKIKTKADCDKAGGVWSASTSTCK
Ga0066903_1014123102	3300005764	Tropical Forest Soil	MRTIAYALALALGVVFATSAFAGDVSTAKTKADCDKAGGMWNASTNTCKSKM*
Ga0066903_1066248331	3300005764	Tropical Forest Soil	MRTFAYALALALGVAFATSAFAGDVTAAKTKADCDKAGGMWDA
Ga0075417_101200572	3300006049	Populus Rhizosphere	MRTIAYTLALVLGVAFATSAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0075432_103435462	3300006058	Populus Rhizosphere	CCVTGRKPMRTIAYALALALGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
Ga0070715_105825243	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	ITYALALALGLAFSATAFAADVTTAKTKAECHKAGGMWDATAKICKAKSGGGY*
Ga0070715_107556881	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIAYALALALGVAFATSAFAGDVTMAKTKDDCDKAGGVWDASTNTCKSKM*
Ga0070716_1004350343	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSTAYPLALALGVAFATSAVAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0070712_1003192842	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSTAYPLALALGVAFATSAVAADVTTAKTKADCDKAGGMWDASTSTCKSKM*
Ga0075422_103557252	3300006196	Populus Rhizosphere	AYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0079221_107505302	3300006804	Agricultural Soil	MKTIAYTLALVLGVAFATSAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0079221_111073151	3300006804	Agricultural Soil	MRSITYALALALEVAFVAPAFAADVTAAKTKADCDKAGGVWDATTKTCAAKQ*
Ga0079220_119551992	3300006806	Agricultural Soil	MRTIAYALALALGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0075428_1017458642	3300006844	Populus Rhizosphere	RTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0075421_1004987701	3300006845	Populus Rhizosphere	MRTIAYALAMALGIVFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM*
Ga0075421_1014698582	3300006845	Populus Rhizosphere	MRTIAYTLALVLGVAFATSAFAGDVTMAKTKADYDKAGGMWDTATSTCKAKQ*
Ga0075431_1021578201	3300006847	Populus Rhizosphere	TGRKPMRTIAYTLALVLGVAFATSAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0075425_1008077012	3300006854	Populus Rhizosphere	MRTIAYTLALALGVAFATAAFAGDVTMAKTKADCDKAGGAWTNTCKSSPSL*
Ga0075425_1011809342	3300006854	Populus Rhizosphere	MRTIAYALALAPGVAFDTSAFAADVTTAKTKADCDKVGGMWDAKTNTCKSNM*
Ga0075426_112820042	3300006903	Populus Rhizosphere	LALALGVAFATSAVAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0079219_105391262	3300006954	Agricultural Soil	MRTIAYALAMALGVAFATAAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM*
Ga0079219_110032762	3300006954	Agricultural Soil	MRTIAYALALALGVAFATSAFAADVTTAKTKADCDKAGGMWDATTNTCKSKM*
Ga0105251_105239212	3300009011	Switchgrass Rhizosphere	YALALALGVAFAASAFAADVTTAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0111539_109403851	3300009094	Populus Rhizosphere	TIAYALAMALGIVFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM*
Ga0075418_131210941	3300009100	Populus Rhizosphere	MRTIAYALALLIGVAFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM*
Ga0114129_116499141	3300009147	Populus Rhizosphere	MRTIAYALALALGVAFASAAFAGDVTMAKTKADCDKAGWVWNATTNTCAAKQ*
Ga0105243_112389261	3300009148	Miscanthus Rhizosphere	MRTIACALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0075423_110001391	3300009162	Populus Rhizosphere	AYALALALGVAFATSAFAGDVTMAKTKDDCDKAGGVWDASSNTCKPKM*
Ga0126373_100335323	3300010048	Tropical Forest Soil	MRTIAYALALTLGVAFATSAFAADLSKIKTKADCDKAGGVWSASTSTCKGKM*
Ga0126370_100118754	3300010358	Tropical Forest Soil	MGRKPMRTIAYALALTLGVAFATSAFAADLSKIKTKADCDKAGGVWSASTSTCKGKM*
Ga0126378_110698622	3300010361	Tropical Forest Soil	MYGEKPMRTIAYALALTLGVAFATSAFAADLSKIKTKADCDKAGGVWSASTSTCKGKM*
Ga0126379_100289461	3300010366	Tropical Forest Soil	LALALGVAFATSAFAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0134125_110776202	3300010371	Terrestrial Soil	MRTIAYTLALVLGVAFATSAFAGDVTMAKTKANCDKAGGMWDTATSTCKAKQ*
Ga0126381_1047857051	3300010376	Tropical Forest Soil	MRTIAYTLALALGVAFGTSAFAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0134126_110308551	3300010396	Terrestrial Soil	KPMRSITYALAFALGVAFAASAFAADVTTAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0134126_122865241	3300010396	Terrestrial Soil	MRTITYVLALALGLAFSATASAADVTTAKTKAECHKAGGMRDETAKICKAKSGGGY*
Ga0126383_126681361	3300010398	Tropical Forest Soil	LKGRCVRTGRKPMKTIAYALALTLGVVFATSALAADLSKIKTKADCDKAGGVWSASTSTCKGKM*
Ga0150985_1092923364	3300012212	Avena Fatua Rhizosphere	MRTIAYALALALGVAFAASAFAGDVTMAKTKADCDKARGMWDATTNTCAAKQ*
Ga0157285_100782342	3300012897	Soil	MRTIAYTLALVLGVAFATSVFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0157299_100900102	3300012899	Soil	LYQYKEKTMRTIAYALALALGVAFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM
Ga0157288_100324011	3300012901	Soil	LALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0157289_103068132	3300012903	Soil	LRTIAYALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0157286_101184421	3300012908	Soil	MRTIAYALALALGVAFATSAFAQDVSAAKTKADCDKAGGMWDTATST
Ga0157286_104685031	3300012908	Soil	MRTIAYALALALGVAFATSAFAQDVSTAKTKADCDKAGGMWDAATNTCK
Ga0157306_100212912	3300012912	Soil	MRTIAYTLALALGVAFATSVFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0157298_101300503	3300012913	Soil	LALVLGGAFATSVFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0157297_103503172	3300012914	Soil	CISTGRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0126375_109508662	3300012948	Tropical Forest Soil	RTIAYALALVLGVAFATSAFAGDVSMAKTKADCDKAGGIWNASTNTCKSKM*
Ga0126375_116113691	3300012948	Tropical Forest Soil	TAYPLALALGVALATSAVAADVTTAKTKADCDKAGGMWDASTNTCKSKM*
Ga0164303_107637561	3300012957	Soil	MRTIAYTLALALGVAFAASAFGGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0164302_114271761	3300012961	Soil	MRTIAYALALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDATTNTCTAKQ*
Ga0164304_107392771	3300012986	Soil	TLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0164305_119512391	3300012989	Soil	MRTIAYALALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDATTNTCAAKQ*
Ga0157307_10677682	3300013096	Soil	GRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0157378_111781502	3300013297	Miscanthus Rhizosphere	MRTIAYTLALVLGVAFATSAFAGDVTMAKTKADCDKAGGMWDIATSTCKAKQ*
Ga0163163_123238991	3300014325	Switchgrass Rhizosphere	MRTIAYTLALALGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0120170_10178414	3300014823	Permafrost	MRTIACALALALGGAFTASAFAGDVTMAKTKADCDKAGGVWDATTYTCAAKQ*
Ga0173483_102340171	3300015077	Soil	MRTIAYALALALGVAFATSAFAQDVTAAKTKADCDKAGGMWDAATNACKAKQ*
Ga0173480_100462091	3300015200	Soil	MRTIAYTLALVLGVAFASSAFAQDVSAAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0132258_114393671	3300015371	Arabidopsis Rhizosphere	MRSITYALALALGVAFATSAFAADVTAAKTKADCDKACGVWDATTNTCAA
Ga0132256_1033196601	3300015372	Arabidopsis Rhizosphere	MRTIAYALALTIGVAFATSAFAADLSKIKTKADCDKAGGMWDASTNTCKSKM*
Ga0132257_1014747411	3300015373	Arabidopsis Rhizosphere	STGRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ*
Ga0132257_1032396091	3300015373	Arabidopsis Rhizosphere	MRTIAYALALALGVAFAASAFAQDVTTAKTKADCDKAGGVWDATTNTCAAKQ*
Ga0182036_116755011	3300016270	Soil	MKTIVYALALALGVVFAMSAFAADVTTAKTKADCDKAGGVWDATTNTCKSKM
Ga0182041_104495912	3300016294	Soil	MKTIVYALALALGVVFAMSAFAADVTTAKTKADCDKAGGVWDATTNT
Ga0182038_101457411	3300016445	Soil	MTKPLSMIVALGFALAIAASAFAADVTTAKTKADCDKAGGVWDASTNTCKSKM
Ga0163161_110709911	3300017792	Switchgrass Rhizosphere	MRTIAYALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
Ga0187785_100259943	3300017947	Tropical Peatland	MRSITYALALALGVAFAASAFAADVTAAKTKADCDKAGGVWDATTNTCVAKQ
Ga0187785_103009382	3300017947	Tropical Peatland	MRTIAYTLALALGVAFAASAFAADVTTAKTKADCDKAGGVWDATTNACVAKQ
Ga0187788_100955151	3300018032	Tropical Peatland	MRSITYALALALGVAFAASAFAAYVTAAKTKADCDKAGGVWDATTNTCVAKQ
Ga0187788_104081401	3300018032	Tropical Peatland	MRSITYALALALGLAFAASAFAADVTAAKTKADCDKAGGVWDATTNTCVAKQ
Ga0187773_101650653	3300018064	Tropical Peatland	MRSITYALALALGVAFAASAFAADVTAAKTKADCDKAGGVWDATTKTCVAKQ
Ga0187774_103352221	3300018089	Tropical Peatland	RSITYALALALGIAFAASAFAADVTAAKTKADCDKAGGVWDATTNTCVAKQ
Ga0173481_100141293	3300019356	Soil	MRTIAYTLALVLGVAFATSAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0173481_107046051	3300019356	Soil	MRTIAYALAMALGVAFATAAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM
Ga0173482_100824782	3300019361	Soil	MRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0173482_101571672	3300019361	Soil	MRTMAYTLALALGVAFATSAFAGDVTMAKTKADCDKAGGMWDTTTNTCKAKQ
Ga0173479_101491702	3300019362	Soil	MRTIAYTLALVLGVAFATSVFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0173479_108628501	3300019362	Soil	STRRKAMRTIAYALAMALGVAFATAAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM
Ga0206350_111184691	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATST
Ga0206354_106058381	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MRTIAYALAMALGIVFATSAFAGDVTMAKTKADCDKAGGAWDA
Ga0206353_120068562	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	TGRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0126371_102036972	3300021560	Tropical Forest Soil	MSTAYPLALALGVALATSAVAADVTTAKTKADCDKAGGMWDASTNTCKSKM
Ga0126371_117899641	3300021560	Tropical Forest Soil	KPMRTIAYALALALGVAFATSAFAGDVSTAKTKADCDKAGGIWNASTNTCKSKM
Ga0247786_11103662	3300022883	Soil	MRTIAYTLALVLGVAFAASVFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0247801_10200041	3300023064	Soil	TIAYALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
Ga0207642_100345396	3300025899	Miscanthus Rhizosphere	KFRCSTGRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0207705_113746991	3300025909	Corn Rhizosphere	RKPMRTIAYALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
Ga0207707_103989051	3300025912	Corn Rhizosphere	MRTIAYTLALALGVAFATSAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0207657_114323971	3300025919	Corn Rhizosphere	MRTIACALALTLGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
Ga0207664_115647221	3300025929	Agricultural Soil	STGRKPMRTIAYALALALGVAFATSAFAGDVTMAKTKDDCDKAGGVWDASSNTCKPKM
Ga0207686_103971751	3300025934	Miscanthus Rhizosphere	SVVSVQGRKPMRTIAYTLALALGVAFAASAFAGDVTMAKTKADCDKAGGMWDTATSTCKAKQ
Ga0207665_107153373	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRSITYALALALGVAFAASAFAADVTAAKTKADCDKAGGVWDA
Ga0209523_10729522	3300027548	Forest Soil	MRTIAYALALTIGVAFATSAFAADLSKIKTKADCDKAGGVWSASTST
Ga0207428_102082484	3300027907	Populus Rhizosphere	MRTIAYTLALVLGVAFATSAFAGDVTMAKTKADCDKAGGMWDT
Ga0207428_102695452	3300027907	Populus Rhizosphere	MRTIAYALAMALGIVFATSAFAGDVTMAKTKADCDKAGGAWDATTNTCKSKM
Ga0207428_108747451	3300027907	Populus Rhizosphere	VQGETMRTIAYALALALGVAFASAAFAGDVTMAKTKADCDKAGGVWDATTNTCAAKQ
Ga0247824_110755361	3300028809	Soil	MRTIAYALALALGVAFASAAFAGDVTMVKTKADCDKAGGVWDATTNTCAAKQ
Ga0310915_109201932	3300031573	Soil	MKTIVYALALALGVVFATSAFAADVTTAKTKADCDKAGGVWDATTNT
Ga0306919_108761101	3300031879	Soil	MRTVAYALALALGVVFATSAFAADVSTAKTKADCDKAGGVWDAATNTCKSKM
Ga0306921_112478761	3300031912	Soil	MRTIAYALALALGVAFATSAFAGDVTMAKTKNDCDKAGGVWDASSNTCKPKM
Ga0306926_112027611	3300031954	Soil	MKTIVYALALALGVVFATSAFAADVTTAKTKADCDKAGGVWDATTNTCKSKM
Ga0306924_115819462	3300032076	Soil	IAYALALALGVVFATSAFAADVTTAKTKADCDKAGGVWDATTNTCKSKM
Ga0306920_1002281423	3300032261	Soil	MRTVAYALALALGVVFATSAFAADVSTAKTKADCDNAGGVWDAATNTCKSKM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056929

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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