Metagenome / Metatranscriptome Family F056927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056927
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	90 residues
Representative Sequence	MDGVHDNNQIPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA
Number of Associated Samples	95
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.29 %
% of genes near scaffold ends (potentially truncated)	19.71 %
% of genes from short scaffolds (< 2000 bps)	68.61 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.080 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.146 % of family members)
Environment Ontology (ENVO)	Unclassified (34.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.445 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.30% β-sheet: 0.00% Coil/Unstructured: 48.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01381	HTH_3	17.52
PF01408	GFO_IDH_MocA	7.30
PF03364	Polyketide_cyc	5.11
PF01638	HxlR	4.38
PF06983	3-dmu-9_3-mt	2.19
PF03705	CheR_N	1.46
PF06071	YchF-GTPase_C	1.46
PF07238	PilZ	1.46
PF08448	PAS_4	1.46
PF13823	ADH_N_assoc	1.46
PF12704	MacB_PCD	1.46
PF00873	ACR_tran	0.73
PF02633	Creatininase	0.73
PF01339	CheB_methylest	0.73
PF00251	Glyco_hydro_32N	0.73
PF13517	FG-GAP_3	0.73
PF01926	MMR_HSR1	0.73
PF13560	HTH_31	0.73
PF02012	BNR	0.73
PF08240	ADH_N	0.73
PF01527	HTH_Tnp_1	0.73
PF00717	Peptidase_S24	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	4.38
COG1352	Methylase of chemotaxis methyl-accepting proteins	Signal transduction mechanisms [T]	2.92
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	2.19
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	2.19
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	1.46
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.46
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.73
COG1621	Sucrose-6-phosphate hydrolase SacC, GH32 family	Carbohydrate transport and metabolism [G]	0.73
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	0.73
COG3507	Beta-xylosidase	Carbohydrate transport and metabolism [G]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.08 %
Unclassified	root	N/A	2.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	72.26 %
Unclassified	root	N/A	2.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	40.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.49 %
Unclassified	root	N/A	2.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.03 %
Unclassified	root	N/A	2.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.73 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.03 %
Unclassified	root	N/A	2.92 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.73 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.88 %
Unclassified	root	N/A	2.92 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	0.73 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.73 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.88 %
Unclassified	root	N/A	2.92 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.73 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.73 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.88 %
Unclassified	root	N/A	2.92 %
Solitalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea	0.73 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.73 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	40.88 %
Unclassified	root	N/A	2.92 %
Solitalea canadensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	0.73 %
Acidipila rosea	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	0.73 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001545\|JGI12630J15595_10001654	All Organisms → cellular organisms → Bacteria → Acidobacteria	4822	Open in IMG/M
3300001593\|JGI12635J15846_10357185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300002245\|JGIcombinedJ26739_100107249	All Organisms → cellular organisms → Bacteria	2621	Open in IMG/M
3300002245\|JGIcombinedJ26739_100370214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1313	Open in IMG/M
3300002245\|JGIcombinedJ26739_101476603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300002906\|JGI25614J43888_10000264	All Organisms → cellular organisms → Bacteria	14411	Open in IMG/M
3300002907\|JGI25613J43889_10024117	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300002917\|JGI25616J43925_10365946	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	533	Open in IMG/M
3300005176\|Ga0066679_10632748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300005434\|Ga0070709_10438997	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300005435\|Ga0070714_100238376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1678	Open in IMG/M
3300005445\|Ga0070708_100424313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1254	Open in IMG/M
3300005537\|Ga0070730_10001619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	21519	Open in IMG/M
3300005547\|Ga0070693_100028912	All Organisms → cellular organisms → Bacteria → Acidobacteria	3018	Open in IMG/M
3300005557\|Ga0066704_10012276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4796	Open in IMG/M
3300005586\|Ga0066691_10157507	All Organisms → cellular organisms → Bacteria → Acidobacteria	1309	Open in IMG/M
3300006028\|Ga0070717_10485841	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300006028\|Ga0070717_11756049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300006163\|Ga0070715_10722669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300006163\|Ga0070715_10738026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300006173\|Ga0070716_101179358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300006893\|Ga0073928_10008088	All Organisms → cellular organisms → Bacteria	13331	Open in IMG/M
3300007255\|Ga0099791_10003674	All Organisms → cellular organisms → Bacteria	6257	Open in IMG/M
3300007258\|Ga0099793_10022766	All Organisms → cellular organisms → Bacteria → Acidobacteria	2590	Open in IMG/M
3300007258\|Ga0099793_10610127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300007265\|Ga0099794_10001039	All Organisms → cellular organisms → Bacteria → Acidobacteria	9444	Open in IMG/M
3300007265\|Ga0099794_10046161	All Organisms → cellular organisms → Bacteria → Acidobacteria	2086	Open in IMG/M
3300007265\|Ga0099794_10243915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300009038\|Ga0099829_10027799	All Organisms → cellular organisms → Bacteria → Acidobacteria	3992	Open in IMG/M
3300009038\|Ga0099829_10032404	All Organisms → cellular organisms → Bacteria	3739	Open in IMG/M
3300009038\|Ga0099829_10058131	All Organisms → cellular organisms → Bacteria	2891	Open in IMG/M
3300009088\|Ga0099830_10313125	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300009088\|Ga0099830_10424148	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300009088\|Ga0099830_11343245	Not Available	594	Open in IMG/M
3300009090\|Ga0099827_10638741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300009143\|Ga0099792_11008859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300011120\|Ga0150983_15871628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300011270\|Ga0137391_10356976	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300011271\|Ga0137393_10855878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300011271\|Ga0137393_11475602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012096\|Ga0137389_10170998	All Organisms → cellular organisms → Bacteria → Acidobacteria	1793	Open in IMG/M
3300012096\|Ga0137389_10257265	All Organisms → cellular organisms → Bacteria → Acidobacteria	1469	Open in IMG/M
3300012189\|Ga0137388_10089620	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300012200\|Ga0137382_10159885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1532	Open in IMG/M
3300012202\|Ga0137363_10005169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8040	Open in IMG/M
3300012202\|Ga0137363_10347472	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300012203\|Ga0137399_11623732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012205\|Ga0137362_11033285	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300012361\|Ga0137360_10008382	All Organisms → cellular organisms → Bacteria → Acidobacteria	6476	Open in IMG/M
3300012362\|Ga0137361_10995737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300012582\|Ga0137358_10009117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6116	Open in IMG/M
3300012582\|Ga0137358_10419303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300012685\|Ga0137397_10949458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300012918\|Ga0137396_10368411	All Organisms → cellular organisms → Bacteria → Acidobacteria	1064	Open in IMG/M
3300012918\|Ga0137396_11005318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300012923\|Ga0137359_10000481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	30170	Open in IMG/M
3300012925\|Ga0137419_10199025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1482	Open in IMG/M
3300012927\|Ga0137416_11879798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300015053\|Ga0137405_1399289	All Organisms → cellular organisms → Bacteria → Acidobacteria	2105	Open in IMG/M
3300015054\|Ga0137420_1188698	All Organisms → cellular organisms → Bacteria → Acidobacteria	2411	Open in IMG/M
3300015054\|Ga0137420_1188700	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300015054\|Ga0137420_1340491	All Organisms → cellular organisms → Bacteria → Acidobacteria	2587	Open in IMG/M
3300015054\|Ga0137420_1437101	All Organisms → cellular organisms → Bacteria → Acidobacteria	2389	Open in IMG/M
3300020140\|Ga0179590_1012396	All Organisms → cellular organisms → Bacteria → Acidobacteria	1868	Open in IMG/M
3300020170\|Ga0179594_10073171	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300020199\|Ga0179592_10151318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300020579\|Ga0210407_10183198	All Organisms → cellular organisms → Bacteria	1624	Open in IMG/M
3300020580\|Ga0210403_11293208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300020581\|Ga0210399_10074606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2749	Open in IMG/M
3300020583\|Ga0210401_10013676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7875	Open in IMG/M
3300020583\|Ga0210401_11621716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300021088\|Ga0210404_10003569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6304	Open in IMG/M
3300021088\|Ga0210404_10086996	All Organisms → cellular organisms → Bacteria → Acidobacteria	1551	Open in IMG/M
3300021168\|Ga0210406_10402411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300021168\|Ga0210406_10793617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300021170\|Ga0210400_10007554	All Organisms → cellular organisms → Bacteria	8996	Open in IMG/M
3300021170\|Ga0210400_10191754	Not Available	1659	Open in IMG/M
3300021170\|Ga0210400_11221110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300021170\|Ga0210400_11669036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300021171\|Ga0210405_10023895	All Organisms → cellular organisms → Bacteria	4931	Open in IMG/M
3300021178\|Ga0210408_11120558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300021178\|Ga0210408_11267109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300021432\|Ga0210384_10871284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300021479\|Ga0210410_10519000	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300021479\|Ga0210410_11454239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300022506\|Ga0242648_1005557	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300022525\|Ga0242656_1085849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300022557\|Ga0212123_10009963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13634	Open in IMG/M
3300022717\|Ga0242661_1073363	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300022717\|Ga0242661_1145711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300024182\|Ga0247669_1035332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300024330\|Ga0137417_1195834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1175	Open in IMG/M
3300024330\|Ga0137417_1245628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → Acidipila rosea	1196	Open in IMG/M
3300025928\|Ga0207700_11940435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300026285\|Ga0209438_1101369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300026320\|Ga0209131_1005165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8560	Open in IMG/M
3300026320\|Ga0209131_1324627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300026359\|Ga0257163_1010537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1387	Open in IMG/M
3300026551\|Ga0209648_10000059	All Organisms → cellular organisms → Bacteria	68219	Open in IMG/M
3300026551\|Ga0209648_10027212	All Organisms → cellular organisms → Bacteria → Acidobacteria	4998	Open in IMG/M
3300026551\|Ga0209648_10424247	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300026557\|Ga0179587_10319527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300027034\|Ga0209730_1014023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300027591\|Ga0209733_1043445	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300027635\|Ga0209625_1007796	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300027635\|Ga0209625_1025125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300027643\|Ga0209076_1016051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1991	Open in IMG/M
3300027663\|Ga0208990_1046629	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300027671\|Ga0209588_1033325	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300027846\|Ga0209180_10035546	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300027846\|Ga0209180_10253721	Not Available	1012	Open in IMG/M
3300027857\|Ga0209166_10012540	All Organisms → cellular organisms → Bacteria	5437	Open in IMG/M
3300027862\|Ga0209701_10009479	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6348	Open in IMG/M
3300027862\|Ga0209701_10059610	All Organisms → cellular organisms → Bacteria → Acidobacteria	2434	Open in IMG/M
3300027875\|Ga0209283_10464301	Not Available	818	Open in IMG/M
3300027882\|Ga0209590_10638746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300028047\|Ga0209526_10048185	All Organisms → cellular organisms → Bacteria → Acidobacteria	3000	Open in IMG/M
3300028047\|Ga0209526_10189548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300028536\|Ga0137415_10548676	All Organisms → cellular organisms → Bacteria → Acidobacteria	965	Open in IMG/M
3300029636\|Ga0222749_10537176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300031057\|Ga0170834_107862852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031122\|Ga0170822_11087692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300031718\|Ga0307474_10634747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300031718\|Ga0307474_10970715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	673	Open in IMG/M
3300031718\|Ga0307474_11350978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300031720\|Ga0307469_10710194	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300031753\|Ga0307477_10061659	All Organisms → cellular organisms → Bacteria	2584	Open in IMG/M
3300031754\|Ga0307475_10013637	All Organisms → cellular organisms → Bacteria → Acidobacteria	5510	Open in IMG/M
3300031754\|Ga0307475_10323574	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300031754\|Ga0307475_11081293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031823\|Ga0307478_10094408	All Organisms → cellular organisms → Bacteria → Acidobacteria	2306	Open in IMG/M
3300031962\|Ga0307479_10118101	All Organisms → cellular organisms → Bacteria → Acidobacteria	2585	Open in IMG/M
3300031962\|Ga0307479_10173532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2119	Open in IMG/M
3300031962\|Ga0307479_10381814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1393	Open in IMG/M
3300032174\|Ga0307470_10481651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300032180\|Ga0307471_100766251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300032205\|Ga0307472_100249475	All Organisms → cellular organisms → Bacteria → Acidobacteria	1391	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.54%
Aquatic	Environmental → Aquatic	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.54%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.75%
Loam	Environmental → Terrestrial → Soil → Loam	16.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.30%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.46%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	10.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.19%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12630J15595_100016542	3300001545	Forest Soil	MNGVQDNQVPNQIPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVAAEPADKSLKRKARAATA*
JGI12635J15846_103571853	3300001593	Forest Soil	VIAGLEQGGSWGPSMNGVHDNNQAPNLQCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEVISEALRAEIQFTWAKVSEGIAESTDQTSKRRTRAAAD*
JGIcombinedJ26739_1001072491	3300002245	Forest Soil	MNGLLDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGIAEPTDQASKRKARVASA*
JGIcombinedJ26739_1003702143	3300002245	Forest Soil	MNLQDNNLQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESAEKALKRKASTASA*
JGIcombinedJ26739_1014766031	3300002245	Forest Soil	PMNLQDNNQTPLNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESADKTLKRKARTASA*
JGI25614J43888_1000026410	3300002906	Grasslands Soil	MNGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGVAEPADQAAKRKARAASA*
JGI25613J43889_100241172	3300002907	Grasslands Soil	MNGVPDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA*
JGI25616J43925_103659461	3300002917	Grasslands Soil	RTSMNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIQLXWAKVSEGIAESTDEAPKRKAHAAAD*
Ga0066679_106327482	3300005176	Soil	MDGVHDNNQIPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA*
Ga0070709_104389971	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAQNENQMQVPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSREVSEALRAEIQRTWAKLTDGALAADGKNEKKNAQEASAPGKPAF*
Ga0070714_1002383763	3300005435	Agricultural Soil	MLNSSEDNHQTADLRCLPSLCRGMYNRVARKLGCDPSYVSRVARGERASEAVSEALRAEIRQTWARISEGLPENSSKAPKRKARATAPSA*
Ga0070708_1004243132	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNGVHDDNNNQTPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSEAVSEALRAEIQLTFSKASEGVGEPLDKSTRRKTRAASA*
Ga0070730_100016194	3300005537	Surface Soil	VRAVHDQVQAPDLRSLPSLCRGIYNRVAHQVGCDPSYVSRVARGERKSEAISEALRAEVALTWAKLNEGSAESTGKAAKRKARVVPA*
Ga0070693_1000289123	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VKTKIAGANCNLTFVTRTSMNGIHDENQNTLRDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSAAVSEALRAEIQLTWAKVTEGIVGSANKIEKKKAQEASA*
Ga0066704_100122764	3300005557	Soil	MDGVDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWARASEGMAEAAEKNAKRKARAASA*
Ga0066691_101575071	3300005586	Soil	MDGVHDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWARASEGMAEAAEKNAKRKARAASA*
Ga0070717_104858412	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNGVPENNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMPDAAEKNAKRKARAASA*
Ga0070717_117560492	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIDSAENNNQTADFRCLPSLCRGMYNRVARKLGCDPSYVSRVARGERASEAVSEALRAEIQQTWARISEGLPENSSKAPKRKARATAAPA*
Ga0070715_107226691	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNGAQNENQTQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSDALRAEIQLTWAKASEGVPESASAKKKARAASA*
Ga0070715_107380262	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNGLPDNNQTPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWARASEGMAEIAEKNAKRKVRAASA*
Ga0070716_1011793582	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPEGANVKPDLLKRIAMSGAQNENQTQVPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSREVSEALRAEIQRTWAKVTDGALAAGDKNEKKNGQGASAPGKSAF*
Ga0073928_100080887	3300006893	Iron-Sulfur Acid Spring	MNGVPDNNQLPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIPDAAEKNAKRKARVASA*
Ga0099791_100036744	3300007255	Vadose Zone Soil	MNGVHDNNHASDLRRLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIHLMWAKVSEGIAESTDEAPKRKAHAAAD*
Ga0099793_100227661	3300007258	Vadose Zone Soil	MVIAGARTPRRHSTLRTSMNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIQLTWAKVSEGIAESTDEAPKGKARAAAD*
Ga0099793_106101271	3300007258	Vadose Zone Soil	MNGVHDNNNNQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA*
Ga0099794_100010395	3300007265	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGMYNRVAQKLGCDPSYVSRVARGERKSDAISEALRAEIQLTWAKVSEGIAESADKAPKGKGSAASA*
Ga0099794_100461612	3300007265	Vadose Zone Soil	MNGVQDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATFSKASEGVAETFDKGSRRKTRVASA*
Ga0099794_102439152	3300007265	Vadose Zone Soil	MNESNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSETVSEALRAEIQLTWAKVSEGTAESPERAPKRKARVASA*
Ga0099829_100277993	3300009038	Vadose Zone Soil	MNGVHDNNNNQTIDLQCLPSLCRGIYNRVAHKVGCDPSYVSRVARGERRSEVVSEALRAEIQATWAKASESVAETFDKGSRRKTQAASA*
Ga0099829_100324042	3300009038	Vadose Zone Soil	MNGVHDNNQAPDLRCLPSLCRGIYNRVAQKLGRDPSYVSRVARGERKSEAISDALRVEIRLTWAKVSEGIAESTDEAPKSKARAAAD*
Ga0099829_100581314	3300009038	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGQRKSEAISEALREEIRITWAKVSEGIAESTDQTPKNRARVAAD*
Ga0099830_103131252	3300009088	Vadose Zone Soil	AGMSAPDISARSASRAFMNGVHDNNHAPDLRCLPSLCRGMYNRVAQRLGCDPSYVSRVARGERKSDAISEALRAEIQLAWAKVSEGIAESADKAPSRKGSAASA*
Ga0099830_104241482	3300009088	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIHLMWAKVSEGIAESTDEAPKRKAHAAAD*
Ga0099830_113432451	3300009088	Vadose Zone Soil	MNGVHDNNNNQTIDLQCLPSLCRGIYNRVAHKVGCDPSYVSRVARGERRSEAVSEALRAEIQATWAKASESVAETFDKGSRRKTQAASA*
Ga0099827_106387412	3300009090	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGQRKSEAISEALREEIRITWAKVSEGIAESADQTPKNRARAAAD*
Ga0099792_110088591	3300009143	Vadose Zone Soil	MNGVHDNNNNQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVIETFDKGSRRRTRAASASA*
Ga0150983_158716281	3300011120	Forest Soil	MNDVQENQQLPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKAVSEALRAEIQLTWAKASEGVIEAADKSAKRRSSAAGA*
Ga0137391_103569762	3300011270	Vadose Zone Soil	MNDVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGQRKSEAISEALREEIRITWAKVSEGIAESTDQTPKNRARVAAD*
Ga0137393_108558782	3300011271	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGMYNRVAQRLGCDPSYVSRVARGERKSDAISEALRAEIQLAWAKVSEGIAESADKAPSRKGSAASA*
Ga0137393_114756021	3300011271	Vadose Zone Soil	MNESNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGTAESPERAPKRKARVASA*
Ga0137389_101709982	3300012096	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQTLGCDPSYVSRVARGERKSEAISEALRAEIHLMWAKVSEGIAESTDEAPKRKAHAAAD*
Ga0137389_102572652	3300012096	Vadose Zone Soil	MNESNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGIAESPEKAPKRKARAALPQATSV*
Ga0137388_100896203	3300012189	Vadose Zone Soil	MNGMLENQENQNGQQNLDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWTRANEGNAEAARKALKRKGRAASA*
Ga0137382_101598852	3300012200	Vadose Zone Soil	MNGVHDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA*
Ga0137363_100051694	3300012202	Vadose Zone Soil	MDGVDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWARASEGMAEIAEKNAKRKARAASA*
Ga0137363_103474722	3300012202	Vadose Zone Soil	MNGVHDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVESFDKGSRRRTRAASASASA*
Ga0137399_116237321	3300012203	Vadose Zone Soil	AATLEVSRAAMNGVQDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATFSKASEGVAETFDKGSRRKTRVASA*
Ga0137362_110332852	3300012205	Vadose Zone Soil	DLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIHLMWAKVSEGIAESTDEAPKCKARAAAD*
Ga0137360_100083825	3300012361	Vadose Zone Soil	MDGVDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA*
Ga0137361_109957371	3300012362	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGQRKSEAISEALREEIRITWAKVSEGIAESADQTPKTRARAAAD*
Ga0137358_100091174	3300012582	Vadose Zone Soil	MNGVYDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIAEAAEKNAKRKARTASA*
Ga0137358_104193031	3300012582	Vadose Zone Soil	MNGVHDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATFSKASEGVAETFDKGSRRKTRVASA*
Ga0137397_109494582	3300012685	Vadose Zone Soil	MLPPARGGYIEISRAAMNGVHDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA*
Ga0137396_103684112	3300012918	Vadose Zone Soil	MNGLNDNNQAPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRLARGERTSEAVSEALRAEIQLTWAKVNEAIAESTENAPKRKTRAASA*
Ga0137396_110053181	3300012918	Vadose Zone Soil	MNGVHDNNNNQIMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA*
Ga0137359_1000048111	3300012923	Vadose Zone Soil	MNESNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSERTAESPEKVPKRKARAVSA*
Ga0137419_101990251	3300012925	Vadose Zone Soil	NHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIHLMWAKVSEGIAESTDEAPKRKAHAAAD*
Ga0137416_118797982	3300012927	Vadose Zone Soil	MNGLNDNNQAPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVNEAIAESTENAPKRKTRAASA*
Ga0137405_13992892	3300015053	Vadose Zone Soil	MNGVHDNNNQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSEAVSEALRAEIQATWAKASEGVVETFDKVRGVERGPLPRRRKNLL*
Ga0137420_11886982	3300015054	Vadose Zone Soil	MNGVHDNNNSQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA*
Ga0137420_11887003	3300015054	Vadose Zone Soil	MNGVHDNNNSQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWEKASEGVVETFDKGSRRRTRAASASA*
Ga0137420_13404916	3300015054	Vadose Zone Soil	MNGVHDNNNNQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKDSRRRTRAASASA*
Ga0137420_14371012	3300015054	Vadose Zone Soil	MNGVHDNNNNQSMDLQCLPSLCRGYTIALRKKWGAILRMVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFD*
Ga0179590_10123963	3300020140	Vadose Zone Soil	MNGVHDNNNNQSMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA
Ga0179594_100731712	3300020170	Vadose Zone Soil	MNGVHDNNNNPTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATWAKASEGVVETFDKGSRRRTRAASASA
Ga0179592_101513183	3300020199	Vadose Zone Soil	MDGVDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWARASEGMAEAAEKNAKRKARAASA
Ga0210407_101831982	3300020579	Soil	MNGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSETVSEALRAEIQLTWAKVSEGIAEPTDQAAKRKARAASA
Ga0210403_112932082	3300020580	Soil	GVPDNNQLPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIPDAGEKNPKRKARVASA
Ga0210399_100746063	3300020581	Soil	MNGVPDNNQLPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIPDAGEKNPKRKARVASA
Ga0210401_100136765	3300020583	Soil	MNGVYDNNQLPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIAADVAEKNAKRKARAASA
Ga0210401_116217161	3300020583	Soil	LASRPLRALPRVSMNDVQENQQLPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKAVSEALRAEIQLTWAKASEGVIEAADKSAKRRSSAAGA
Ga0210404_100035692	3300021088	Soil	LNDNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVNQAIAESTENAPKRKARAASA
Ga0210404_100869962	3300021088	Soil	MNVQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESADKALKRKASTASA
Ga0210406_104024111	3300021168	Soil	MNGLVDNKNNQAPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSETVSEALRAEIQLTWAKVSEGIAEPTDQAAKRKARAASASA
Ga0210406_107936171	3300021168	Soil	MNVQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESADKALKRKASTASS
Ga0210400_100075545	3300021170	Soil	MNSSNGNNQTPDLRSLPSLCRGLYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKASERTAGSPAKASKRKARSVSA
Ga0210400_101917542	3300021170	Soil	MNESNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIKLTWAKVSEVNAESPEKAPKRKARAASAQATSV
Ga0210400_112211101	3300021170	Soil	DNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA
Ga0210400_116690361	3300021170	Soil	MNEPNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSETVSEALRAEIQLTWAKVSEGIAESPEKAPKRKARAASAHATSV
Ga0210405_100238953	3300021171	Soil	MNVQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVGESAEKALKRKASTASAQFLSKF
Ga0210408_111205582	3300021178	Soil	QCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKAVSEALRAEIQLTWAKASEGVIEAADKSAKRRSSAAGA
Ga0210408_112671091	3300021178	Soil	MNDVQENQQLPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKAVSEALRAEIQLTWAKASEGVIEAADKSAKRRSSAAGA
Ga0210384_108712842	3300021432	Soil	MNGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSETVSEALRAEIQLTWAKVSEGIAEPTDQAAKRKARAASASA
Ga0210410_105190002	3300021479	Soil	MNGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGIAEPTDQAAKRKARAASA
Ga0210410_114542392	3300021479	Soil	QDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESADKALKRKASTASA
Ga0242648_10055572	3300022506	Soil	MNGLNDNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVNQAIAESTENAPKRKARAASA
Ga0242656_10858492	3300022525	Soil	RCWIRGAAWSTCMNGVHDNNQALSLQCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSKAISEALRAEIQFTWAKVSEGIAESTDRAPKPKVSAAAD
Ga0212123_100099636	3300022557	Iron-Sulfur Acid Spring	MNGVPDNNQLPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIPDAAEKNAKRKARVASA
Ga0242661_10733631	3300022717	Soil	MNEPNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIKLTWAKVSEVNAESP
Ga0242661_11457112	3300022717	Soil	WIRGAAWSTCMNGVHDNNQALSLQCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSKAISEALRAEIQFTWAKVSEGIAESTDRAPKPKVSAAAD
Ga0247669_10353322	3300024182	Soil	VKTKIAGANCNLTFVTRTSMNGIHDENQNTLRDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSAAVSEALRAEIQLTWAKVTEGIVGSANKIEKKKAQEASA
Ga0137417_11958343	3300024330	Vadose Zone Soil	MNGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGVAEPADQAAKRKARAASA
Ga0137417_12456281	3300024330	Vadose Zone Soil	MDGVDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWARASEGMAEIAEKNAKRKARAASA
Ga0207700_119404351	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNGVHDDNNNQTPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSEAVSEALRAEIQLTFSKASEGVGEPLDKSTRRKTRAASA
Ga0209438_11013691	3300026285	Grasslands Soil	MDGVDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA
Ga0209131_10051654	3300026320	Grasslands Soil	MNGVPDNNQIPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMAEAAEKNAKRKARAASA
Ga0209131_13246272	3300026320	Grasslands Soil	LRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGMAEAAEKNVKRKARAASA
Ga0257163_10105373	3300026359	Soil	MNGVQDNQVPNQIPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVAAEPADKSLKRKARAATA
Ga0209648_1000005964	3300026551	Grasslands Soil	MNESNGNNQTPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSERTAESPEKVPKRKARAVSA
Ga0209648_100272122	3300026551	Grasslands Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRGEIHLMWAKVSEGIAESTDEAPKRKAHAAAD
Ga0209648_104242472	3300026551	Grasslands Soil	MNGVHDNNHAPDLRCLPSLCRGMYNRVAQKLGCDPSYVSRVARGERKSDAISEALRAEIQLTWAKVSEGIAESADKAPKGKGSAASA
Ga0179587_103195272	3300026557	Vadose Zone Soil	MYGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGVAEPADQAAKRKARAASA
Ga0209730_10140231	3300027034	Forest Soil	MNDSNGNNPPDLRSLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSETVSEALRAEIQLTWAKVSEGIAESPEKAPKHKARAATA
Ga0209733_10434452	3300027591	Forest Soil	VTAGIFITRTPMNLQDNNQSPLNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGAVESADKTLKRKASTASA
Ga0209625_10077961	3300027635	Forest Soil	AGIFIKRTPMNLQDNNLQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKVSEGIVESADKALKRKARTASA
Ga0209625_10251253	3300027635	Forest Soil	MNGLLDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEVQLTWAKVSEGIAEPTDQAAKRKARAASA
Ga0209076_10160512	3300027643	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIHLMWAKVSEGIAESTDEAPKRKAHAAAD
Ga0208990_10466293	3300027663	Forest Soil	MNGVQDNNNNQTIDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATFSKASEGVAETFDKGSRRKTRVASA
Ga0209588_10333252	3300027671	Vadose Zone Soil	MNGVQDNNNNQTMDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSETVSEALRAEIQATFSKASEGVAETFDKGSRRKTRVASA
Ga0209180_100355464	3300027846	Vadose Zone Soil	MNGVHDNNQAPDLRCLPSLCRGIYNRVAQKLGRDPSYVSRVARGERKSEAISDALRVEIRLTWAKVSEGIAESTDQTPKNRARVAAD
Ga0209180_102537211	3300027846	Vadose Zone Soil	TPPLVAARLEVPRASMNGVHDNNNNQTIDLQCLPSLCRGIYNRVAHKVGCDPSYVSRVARGERRSEAVSEALRAEIQATWAKASESVAETFDKGSRRKTQAASA
Ga0209166_100125404	3300027857	Surface Soil	VRAVHDQVQAPDLRSLPSLCRGIYNRVAHQVGCDPSYVSRVARGERKSEAISEALRAEVALTWAKLNEGSAESTGKAAKRKARVVPA
Ga0209701_100094794	3300027862	Vadose Zone Soil	MNGVHDNNQAPDLRCLPSLCRGIYNRVAQKLGRDPSYVSRVARGERKSEAISDALRVEIRLTWAKVSEGIAESTDEAPKSKARAAAD
Ga0209701_100596102	3300027862	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGMYNRVAQKLGCDPSYVSRVARGERKSDAISEALRAEIQLAWAKVSEGIAESADKAPSRKGSAASA
Ga0209283_104643011	3300027875	Vadose Zone Soil	MNGVHDNNNNQTIDLQCLPSLCRGIYNRVAHKVGCDPSYVSRVARGERRSEAVSEALRAEIQATWAKASESVAETFDKGSRRKTQAASA
Ga0209590_106387462	3300027882	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGQRKSEAISEALREEIRITWAKVSEGIAESADQTPKNRARAAAD
Ga0209526_100481852	3300028047	Forest Soil	MNGLNDNNQAPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVNEAIAESTENAPKRKTRAASA
Ga0209526_101895482	3300028047	Forest Soil	MNLQDNNLQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESAEKALKRKASTASA
Ga0137415_105486762	3300028536	Vadose Zone Soil	MNGVHDNNHAPDLRCLPSLCRGMYNRVAQKLGCDPSYVSRVARGERKSDAISEALRAEIQLTWAKVSEGIAESADKAPKG
Ga0222749_105371761	3300029636	Soil	MNGLVDNKNNPTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGIAEPTDQAAKRKARAASA
Ga0170834_1078628521	3300031057	Forest Soil	VIAGLEQGGSWGPSMNGVHDNNQTPKLQSLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEVISEALRAEIQFTWAKVSEGIAESTDRTPKRKASAAAD
Ga0170822_110876921	3300031122	Forest Soil	HRCTINVTVIAGLEQGGSWGPSMNGVHDNNQTPKLQSLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIQFTWAKVSEGIAESTDRAPKRKASAAAD
Ga0307474_106347471	3300031718	Hardwood Forest Soil	MNDLQENQQIPDLRCLPSLCRGIYNRVAQKMGCDPSYVSRVARGERNSKVVSEALRAEIQLTWAKVSEGIVEGAAKSARRRSRAAGA
Ga0307474_109707151	3300031718	Hardwood Forest Soil	QQTELNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESADKALKRKARAVSA
Ga0307474_113509781	3300031718	Hardwood Forest Soil	NNQLPDLRCLPSLCRGIYNRVALKVGCDPSYVSRVARGERNSDAVSEALRAEIQLTWAKASEGIAAEAAEKNAKRKARAASA
Ga0307469_107101942	3300031720	Hardwood Forest Soil	MIDSPENNNQTPDLRCLPSLCRGMYNRVARKLGCDPSYVSRVARGERASEAVSEALRAEIQQTWARISEGLPQNSSKAPKRKAGETAAP
Ga0307477_100616592	3300031753	Hardwood Forest Soil	MNVQDNNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVGFADKALKRKASTASV
Ga0307475_100136371	3300031754	Hardwood Forest Soil	DLRCLPSLCRGVYNRVAQKVGCDPSYVSRVARGERNSKVVSEALRAEMQLTWAKASEVVTDGVDKSVRRRSRAASA
Ga0307475_103235741	3300031754	Hardwood Forest Soil	GVEKVTPRMYHQRYRDCRCWIRGAAWSTCMNGVHDNNQTPSLQCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIQFTWAKVSAGIAESTDRTPKRKASAAAD
Ga0307475_110812932	3300031754	Hardwood Forest Soil	MNELQENQQLPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKVVSDALRAEIQLTWAKASEGIVEGAEKIARRRTHAAGA
Ga0307478_100944082	3300031823	Hardwood Forest Soil	MNLPDNNQQTELNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGVVESADKALKRKARAVSA
Ga0307479_101181013	3300031962	Hardwood Forest Soil	MNNVQENQQLPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKVVSEALRAEIQLTWAKASEGVAELADKSARRSSRAATA
Ga0307479_101735322	3300031962	Hardwood Forest Soil	MNDVQENQQLPDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSKVVSEALRAEIQLTWAKASEGVMEGADKSAKRRSSAASA
Ga0307479_103818142	3300031962	Hardwood Forest Soil	MNGLVDNKNNQTPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERTSEAVSEALRAEIQLTWAKVSEGIAEPTDQAAKRKARAASASA
Ga0307470_104816512	3300032174	Hardwood Forest Soil	MNLPDNNQQTELNQSPDLRCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERNSEAVSEALRAEIQLTWAKASEGIVESADKALKRKARTASA
Ga0307471_1007662512	3300032180	Hardwood Forest Soil	MNGVHDNTHAPDLRCLPSLCRGIYNRVAQKLGCDPSYVSRVARGERKSEAISEALRAEIRLTWAKVSEGNAESTDKAPKRKASAVSA
Ga0307472_1002494751	3300032205	Hardwood Forest Soil	MNGVHDNNNNQTVDLQCLPSLCRGIYNRVAQKVGCDPSYVSRVARGERRSEAVSEALRAEIQATWAKAIEGVVETFDKTSSRRKTRAASA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056927

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences