Metagenome / Metatranscriptome Family F056924

Basic Information
Family ID	F056924
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	47 residues
Representative Sequence	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGF
Number of Associated Samples	114
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.08 %
% of genes near scaffold ends (potentially truncated)	77.37 %
% of genes from short scaffolds (< 2000 bps)	78.10 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Most Common Taxonomy
Group	Bacteria (83.212 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.409 % of family members)
Environment Ontology (ENVO)	Unclassified (29.927 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.876 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.83% β-sheet: 0.00% Coil/Unstructured: 54.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03795	YCII	26.28
PF06172	Cupin_5	4.38
PF01042	Ribonuc_L-PSP	3.65
PF12680	SnoaL_2	2.19
PF13505	OMP_b-brl	2.19
PF13924	Lipocalin_5	2.19
PF00561	Abhydrolase_1	2.19
PF02371	Transposase_20	1.46
PF07690	MFS_1	1.46
PF14437	MafB19-deam	0.73
PF08332	CaMKII_AD	0.73
PF00903	Glyoxalase	0.73
PF00375	SDF	0.73
PF03544	TonB_C	0.73
PF07075	DUF1343	0.73
PF01715	IPPT	0.73
PF02223	Thymidylate_kin	0.73
PF13673	Acetyltransf_10	0.73
PF14499	DUF4437	0.73
PF07676	PD40	0.73
PF14534	DUF4440	0.73
PF12681	Glyoxalase_2	0.73
PF12697	Abhydrolase_6	0.73
PF01266	DAO	0.73
PF10042	DUF2278	0.73
PF13537	GATase_7	0.73
PF01370	Epimerase	0.73
PF08282	Hydrolase_3	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	26.28
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	4.38
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	3.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.46
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.73
COG0324	tRNA A37 N6-isopentenylltransferase MiaA	Translation, ribosomal structure and biogenesis [J]	0.73
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.73
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.73
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.73
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.73
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.73
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.21 %
Unclassified	root	N/A	16.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.21 %
Unclassified	root	N/A	16.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.21 %
Unclassified	root	N/A	16.79 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	36.50 %
Unclassified	root	N/A	16.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.22 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	36.50 %
Unclassified	root	N/A	16.79 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.19 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	22.63 %
Unclassified	root	N/A	16.79 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.19 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.46 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.73 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.73 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.73 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.63 %
Unclassified	root	N/A	16.79 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.19 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.46 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.73 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.73 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.73 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.73 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.63 %
Unclassified	root	N/A	16.79 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.46 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	0.73 %
Nitrosomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas	0.73 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.63 %
Unclassified	root	N/A	16.79 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.46 %
Roseimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium	0.73 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.73 %
unclassified Nitrosomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas	0.73 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.73 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.63 %
Unclassified	root	N/A	16.79 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.46 %
unclassified Roseimicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → unclassified Roseimicrobium	0.73 %
Caulobacter sp. 17J65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J65-9	0.73 %
Nitrosomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp.	0.73 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.73 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	22.63 %
Unclassified	root	N/A	16.79 %
Chthoniobacter flavus Ellin428	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	1.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.46 %
Roseimicrobium sp. ORNL1	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → unclassified Roseimicrobium → Roseimicrobium sp. ORNL1	0.73 %
Caulobacter sp. 17J65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J65-9	0.73 %
Nitrosomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp.	0.73 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	0.73 %
Collimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	0.73 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.73 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.73 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17363375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1194	Open in IMG/M
2170459010\|GIO7OMY01AMAT6	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101706274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1131	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101706702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300000890\|JGI11643J12802_12363380	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300000955\|JGI1027J12803_107850763	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300004114\|Ga0062593_100458423	All Organisms → cellular organisms → Bacteria → Proteobacteria	1165	Open in IMG/M
3300004480\|Ga0062592_101032735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	754	Open in IMG/M
3300004480\|Ga0062592_101909746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300005184\|Ga0066671_10922108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300005187\|Ga0066675_11034592	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005328\|Ga0070676_10185290	Not Available	1356	Open in IMG/M
3300005340\|Ga0070689_100568555	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005356\|Ga0070674_102079401	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005365\|Ga0070688_100708790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300005435\|Ga0070714_100616835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1042	Open in IMG/M
3300005435\|Ga0070714_100675383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	995	Open in IMG/M
3300005441\|Ga0070700_101421265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300005446\|Ga0066686_10957033	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005456\|Ga0070678_100842676	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300005466\|Ga0070685_11566463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300005764\|Ga0066903_102939043	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005764\|Ga0066903_102977937	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300005764\|Ga0066903_104828369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	716	Open in IMG/M
3300005937\|Ga0081455_10109345	All Organisms → cellular organisms → Bacteria	2200	Open in IMG/M
3300005937\|Ga0081455_10217934	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1417	Open in IMG/M
3300005937\|Ga0081455_10443791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300005983\|Ga0081540_1118528	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300006046\|Ga0066652_100394076	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1260	Open in IMG/M
3300006163\|Ga0070715_10880346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300006173\|Ga0070716_100227501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1257	Open in IMG/M
3300006175\|Ga0070712_100479757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Collimonas	1039	Open in IMG/M
3300006904\|Ga0075424_100216891	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300009090\|Ga0099827_10360484	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300009174\|Ga0105241_11073456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300010329\|Ga0134111_10312131	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010335\|Ga0134063_10574240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	571	Open in IMG/M
3300010359\|Ga0126376_10124899	All Organisms → cellular organisms → Bacteria	2015	Open in IMG/M
3300010359\|Ga0126376_10999207	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300010360\|Ga0126372_10166116	All Organisms → cellular organisms → Bacteria → Proteobacteria	1789	Open in IMG/M
3300010361\|Ga0126378_12202964	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300010366\|Ga0126379_11492981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	782	Open in IMG/M
3300011003\|Ga0138514_100003682	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2146	Open in IMG/M
3300012202\|Ga0137363_10196375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1616	Open in IMG/M
3300012350\|Ga0137372_10849555	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300012359\|Ga0137385_10849916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp.	757	Open in IMG/M
3300012359\|Ga0137385_11461589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	547	Open in IMG/M
3300012361\|Ga0137360_11228773	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012685\|Ga0137397_10587475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300012924\|Ga0137413_10262576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1191	Open in IMG/M
3300012929\|Ga0137404_10595080	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300012929\|Ga0137404_11336355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	661	Open in IMG/M
3300012951\|Ga0164300_10031211	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300012955\|Ga0164298_11514779	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012960\|Ga0164301_10534848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300012971\|Ga0126369_13319419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus → Chthoniobacter flavus Ellin428	527	Open in IMG/M
3300012984\|Ga0164309_10528263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	908	Open in IMG/M
3300012984\|Ga0164309_11708564	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → unclassified Roseimicrobium → Roseimicrobium sp. ORNL1	540	Open in IMG/M
3300012988\|Ga0164306_10945864	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300013102\|Ga0157371_11121128	Not Available	604	Open in IMG/M
3300013297\|Ga0157378_10481179	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1237	Open in IMG/M
3300015077\|Ga0173483_10662955	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300015242\|Ga0137412_10128031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2055	Open in IMG/M
3300015357\|Ga0134072_10110197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	859	Open in IMG/M
3300015373\|Ga0132257_102383001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300015373\|Ga0132257_102437830	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300015373\|Ga0132257_104531818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300015374\|Ga0132255_100462592	All Organisms → cellular organisms → Bacteria	1858	Open in IMG/M
3300015374\|Ga0132255_101714359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300016294\|Ga0182041_10558435	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300016341\|Ga0182035_12122849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300016387\|Ga0182040_10080854	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300016404\|Ga0182037_11905800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300018028\|Ga0184608_10039046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1825	Open in IMG/M
3300019789\|Ga0137408_1327858	All Organisms → cellular organisms → Bacteria → Proteobacteria	6528	Open in IMG/M
3300019867\|Ga0193704_1019768	All Organisms → cellular organisms → Bacteria → Proteobacteria	1369	Open in IMG/M
3300019869\|Ga0193705_1068403	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300019870\|Ga0193746_1026413	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300019877\|Ga0193722_1084187	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300019886\|Ga0193727_1084091	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300020002\|Ga0193730_1047731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J65-9	1237	Open in IMG/M
3300021363\|Ga0193699_10051198	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300021560\|Ga0126371_12476073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300022534\|Ga0224452_1038889	All Organisms → cellular organisms → Bacteria → Proteobacteria	1392	Open in IMG/M
3300023058\|Ga0193714_1066894	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300025905\|Ga0207685_10762096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300025906\|Ga0207699_10150858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1538	Open in IMG/M
3300025915\|Ga0207693_10303798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1250	Open in IMG/M
3300025915\|Ga0207693_10649074	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300025916\|Ga0207663_10793431	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300025936\|Ga0207670_11520641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	569	Open in IMG/M
3300025938\|Ga0207704_11460117	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300025938\|Ga0207704_11949503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300025940\|Ga0207691_10161782	All Organisms → cellular organisms → Bacteria → Nitrospirae	1963	Open in IMG/M
3300025972\|Ga0207668_10010202	All Organisms → cellular organisms → Bacteria	5669	Open in IMG/M
3300026530\|Ga0209807_1029686	All Organisms → cellular organisms → Bacteria	2632	Open in IMG/M
3300026530\|Ga0209807_1160895	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300026548\|Ga0209161_10174483	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300027018\|Ga0208475_1020665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	645	Open in IMG/M
3300027018\|Ga0208475_1031133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	527	Open in IMG/M
3300027252\|Ga0209973_1057148	Not Available	596	Open in IMG/M
3300028784\|Ga0307282_10607191	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300028819\|Ga0307296_10022851	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3298	Open in IMG/M
3300030916\|Ga0075386_12165232	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300030966\|Ga0075383_11230291	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031057\|Ga0170834_104149242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1522	Open in IMG/M
3300031231\|Ga0170824_101645518	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031231\|Ga0170824_121757461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1048	Open in IMG/M
3300031469\|Ga0170819_10765282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	853	Open in IMG/M
3300031474\|Ga0170818_113808306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1076	Open in IMG/M
3300031562\|Ga0310886_10331071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300031573\|Ga0310915_10873161	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031833\|Ga0310917_10201341	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300031942\|Ga0310916_10576238	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300031943\|Ga0310885_10067889	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300031954\|Ga0306926_10735250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1194	Open in IMG/M
3300033289\|Ga0310914_10840164	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.56%
Host-Associated	Host-Associated	20.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.10%
Plants	Host-Associated → Plants	20.44%
Aquatic	Environmental → Aquatic	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.37%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.03%
Sediment	Environmental → Aquatic → Sediment	1.46%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.04%
Loam	Environmental → Terrestrial → Soil → Loam	15.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.46%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.22%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056924

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02082290	2088090014	Soil	MKTKLVLTIAILIGVLALISAGYCFWLMNIPLSYRWVPVVVTGFLQAIFVFVISLITSLV
GPIPI_03170990	2088090014	Soil	MKVKLVLKVIALIGVPALIAAGYCFWLMTVPLSYD
F62_09461220	2170459010	Grass Soil	MKTKLVLKIAGLIGVLTLISAGYCFWLMTVPLSYRWVPVVLIGFVVSIGVFVISLIT
INPhiseqgaiiFebDRAFT_1017062742	3300000364	Soil	MNTKLTFKAVGTIGVLALISTIYCFWLMTVPLSYDLV*
INPhiseqgaiiFebDRAFT_1017067022	3300000364	Soil	MNTKLALKMAGTIGVLALISTIYCFWLMTVPLSYDLV*
JGI11643J12802_123633801	3300000890	Soil	MATKLVLKVAGLIGLLALISAGYCFWLMTVPLSYDWVPVVLVGFVVATGVFVIS
JGI1027J12803_1078507633	3300000955	Soil	MKTKLALKVVGSIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVVAVG
Ga0062593_1004584231	3300004114	Soil	MKVKLVLKVIALIGVPALIAAGYCFWLMTVPLSYD*VPVVLIGFVVAIGVF
Ga0062589_1003713791	3300004156	Soil	MVIGLIGMLALISAAYCFWLMTIPLSYDLVYVVVIGFAVSL
Ga0063356_1015764371	3300004463	Arabidopsis Thaliana Rhizosphere	MKTKLVLTIGVLIGVLAVIAAGYCFWLMENPLSYRWVPVVITGFLLAIFVFIISLITSIIALI
Ga0062592_1010327351	3300004480	Soil	MATKLVLKVAGLIGLLALISAGYCFWLMTVPLSYDWVPVVLVG
Ga0062592_1019097461	3300004480	Soil	MKTKLVLTIAVLIGGLALVAAGYCFWLMTVPLSYDWVPVVLIGFVVAIGVFL
Ga0066671_109221082	3300005184	Soil	MKTKLTLKVVGLIGVLALISAGYCFWRMTVPLSYDWVPVV
Ga0066675_110345922	3300005187	Soil	MKTKRSLMVIGLIGLLALISATYCFWLMTVPLSYDLVYVVVI
Ga0070676_101852901	3300005328	Miscanthus Rhizosphere	MKTKRFLMVSGLVGVLALISASYCFWLMTIPLSYNLVYVVV
Ga0066388_1044682392	3300005332	Tropical Forest Soil	MKTKLVLTIAVVIGVLALGAAAYCFWLMDNPLSYRWVPVVITGFLLALFVFIIAS
Ga0068868_1018935652	3300005338	Miscanthus Rhizosphere	MKTKRRFILVSLIGGLALVTGSYCFWLMTVPLSYDWVYIVVAGLV
Ga0070689_1005685551	3300005340	Switchgrass Rhizosphere	MKTKLLLAIAVLIGVLSLISGGYCFYLMNVPLSYRWVPVVVT
Ga0070674_1020794012	3300005356	Miscanthus Rhizosphere	MKTKRFLMVSGLVGVLALISASYCFWLMTIPLSYNLVYVVVIGFIVSLG
Ga0070688_1007087902	3300005365	Switchgrass Rhizosphere	MKTKRSLMVSGLVGVFALVSAAYCFWLMTVPLSYNLVYVVV
Ga0070714_1006168352	3300005435	Agricultural Soil	MKTKLALKVVGLIGLLALISAGYCFWLMTVPLSYDWVPVVLIGFVLSTGVFVTSLITSFIVL
Ga0070714_1006753831	3300005435	Agricultural Soil	MKTKLALKVVGLIGVLALILASYCFWLMTVPLSYDFVPVVLIGFVLSTSVFVISLITSF
Ga0070700_1014212651	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKVVLTTAVLIGVLALISAGYCFWLMDNPLSYRWVPVVITGFL
Ga0066686_109570332	3300005446	Soil	MKTKRSLMVIALIGVLAFISAAYCFWLMTVPLSYDLVYVVVI
Ga0070678_1008426761	3300005456	Miscanthus Rhizosphere	MKTKIVLTIAVVIGVLSLISGGYCFWLMTVPLSYSWVPVVVTG
Ga0070685_115664631	3300005466	Switchgrass Rhizosphere	MKIKVVLTTAVLIGVLALISAGYCFWLMDHPLSYRWVPVVI
Ga0066903_1029390431	3300005764	Tropical Forest Soil	MNSKLVLKIVGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVVAIGV
Ga0066903_1029779371	3300005764	Tropical Forest Soil	MKTNRAVIVVGLIGLLALILASYCFWLMTVPLSYDWVIP
Ga0066903_1048283693	3300005764	Tropical Forest Soil	MKTKLVLKIAVLIGVLALIAAGYCFWLMTVPLSYDWVPVVLIGFVM
Ga0068858_1016232861	3300005842	Switchgrass Rhizosphere	MKIKVVLTTAVLIGVLALISAGYCFWLMDHPLSYRWVPVVITGFLPAIFVFIISLVTLFIAL
Ga0081455_101093451	3300005937	Tabebuia Heterophylla Rhizosphere	MKTKLVLTVAGLIGVLALISAGYCFWLMTIPLSYDWVPVVLIGFI
Ga0081455_102179344	3300005937	Tabebuia Heterophylla Rhizosphere	MKTKLVLAIAVLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVVATGVFVI
Ga0081455_104437913	3300005937	Tabebuia Heterophylla Rhizosphere	MKTKLVLTVAALIGVLSLISAGYCFWLMTVPLSYDWVPFVLIGFVVATGVFVIALITSF
Ga0081540_11185281	3300005983	Tabebuia Heterophylla Rhizosphere	MKTKLVLTIAVVTGLLALISAGYCFWLADNPLSYRWVPAVITG
Ga0066652_1003940763	3300006046	Soil	MKTKLTLKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVV
Ga0066652_1014468022	3300006046	Soil	MVIALIGVLTFISAAYCFWLMTVPLSYDLVYVVVIGFIVS
Ga0070715_108803462	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKLALKVVGLIGLLALISAGYCFWLMTVPLSYDWVP
Ga0070716_1002275012	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKLALKVVGLIGLLALILAGYCFWLMTVPLSYDWVPVVLIGFVLSTGVYVTSLITS
Ga0070712_1004797573	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKVALKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVL
Ga0075424_1002168911	3300006904	Populus Rhizosphere	MKTKLVLTIAVLIGGLALVAAGYCFWLMNVPLSYRWVPV
Ga0075435_1003628731	3300007076	Populus Rhizosphere	MKTKLVLTIAVVIGVLAVISAGYCFWLMENPLSYSWVPVVITGFLLAIFVFIISLITSIIALI
Ga0099827_103604841	3300009090	Vadose Zone Soil	MKTKLTLKVVGLIGVLTLISAGYCFWLMTVPLSYDWVP
Ga0105241_110734561	3300009174	Corn Rhizosphere	MKTKPVLKIAVLIGVLALVSAGYCFWLMTVPLSYHWVPVVLIGFVVSI
Ga0134111_103121311	3300010329	Grasslands Soil	MKTKLVLKVAGLIGLLALISAGYCFWLMTVPLSYDWVPVVLIG
Ga0134063_105742402	3300010335	Grasslands Soil	MKAKLVLKVAGLIGVLALISAGYCFWLMIFPLSYDWVPVVLSGFVLATGVFVIS
Ga0126376_101248993	3300010359	Tropical Forest Soil	MKTKLVLTIAVLIGVLALVAAGYCFWLMNVPLSYR*
Ga0126376_109992071	3300010359	Tropical Forest Soil	MIFGVMKTKLVLTIAVLIGVLSLISGGYCFWLMNVPL
Ga0126372_101661161	3300010360	Tropical Forest Soil	MNIKRSLVASGLLGVLALISAGYCFWLMTVPLSYDLVY
Ga0126372_128564622	3300010360	Tropical Forest Soil	MKTKLVLIVAVLIGVLALISGGYCFWLMNVPLSYRWVPVVVTGFLLAIFMFIISLVTSIV
Ga0126378_122029642	3300010361	Tropical Forest Soil	MNSKLVLKIVGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVVAIGVFV
Ga0126379_114929811	3300010366	Tropical Forest Soil	MKTKLVLAIAVVIGVLALIAAGYCFWLMDNPLSYRWVPVVITGFL
Ga0134127_131002331	3300010399	Terrestrial Soil	MKIKVVMTTAVLIGVLALISAGYCFWLMDNPLSYRWVPVVITGFLLAIFVFIISLVTFFI
Ga0138514_1000036825	3300011003	Soil	MKTKLALKVVGLICVLALISAGYCFWLMTVPLSYDWVYAVVIGFV
Ga0137363_101963751	3300012202	Vadose Zone Soil	MKTKRSLMVVGLIGVLALISAAYCFWLMTVPLSYDLVYVVVIG
Ga0137372_108495552	3300012350	Vadose Zone Soil	MKTKLTLKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVVIGFVVSI
Ga0137385_108499162	3300012359	Vadose Zone Soil	MKTKLTLKVVGLIGVLALISAGYCFWLMTIPLSYDWVPVVVIGFVVSIGVFVISLISSFI
Ga0137385_114615892	3300012359	Vadose Zone Soil	MKTKLTLKVVGLIGVLALISAGYCFWLMTVPLSYD
Ga0137360_112287731	3300012361	Vadose Zone Soil	MTNKLALKVVGLIGVLALISASYCFWLMTVPLSYDWVYAV
Ga0137397_105874752	3300012685	Vadose Zone Soil	MKIAGLIGVLALISTGYCFWLMTVPLSYHWVPVVLIGFVVSIGVLVISLITSFILLTRLR
Ga0137413_102625761	3300012924	Vadose Zone Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVYAVVIGCVVSIGVFVISLISSI
Ga0137404_105950801	3300012929	Vadose Zone Soil	MKTKLALKVVGLIDVLALISAGYCFWLMTVPLSYDWVPVVLIGFVVSIGVSVISLI
Ga0137404_113363551	3300012929	Vadose Zone Soil	MKTKLALKVVGLIGALALISAGYCFWLMTVPLSYDWVYAVV
Ga0126375_111484862	3300012948	Tropical Forest Soil	MKIKVVLMIAVVTGVLALISAGYCFWLMDNPLSYRWVPVVITGFLLAIFVFIISLV
Ga0164300_100312111	3300012951	Soil	MRTKLFLKVAGLIGVLALISTGYCFWLMTVPLSYH
Ga0164298_115147791	3300012955	Soil	MKAKLVLKVTALIGVPALIAAGYCFWLMTVPLSYDW
Ga0164301_105348481	3300012960	Soil	MKTKLVLKIAGLIGVLALISTGYCFWLMTVPLSYHWVPV
Ga0126369_121459462	3300012971	Tropical Forest Soil	MKTKLVLTIAGVIGVLALISGGCCFWLMTVPLSYNWVPVVITGFLLAIFVFII
Ga0126369_133194191	3300012971	Tropical Forest Soil	MKTKLVLKIAVLIGVLALIAAGYCFWLMTVPLSYDWVPVVLIGF
Ga0164309_105282632	3300012984	Soil	MKTKLVLKIAGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVVAIGVFVI
Ga0164309_117085641	3300012984	Soil	MKTKLALKVVALIGVLALISTGYCFWLMTVPLSYHW
Ga0164306_109458642	3300012988	Soil	MKAKLVLTIAVLIGVLALISTGYCFWLMTVPLSYHWVSVVLIGFG
Ga0157371_111211281	3300013102	Corn Rhizosphere	MNTKLTFKVVGTIGVLALISTIYCFWLMTVPPFL*
Ga0157378_104811791	3300013297	Miscanthus Rhizosphere	MKTKLVLKVVGLIGALALIAAGYCFWLMTVPLSYDWCPLS*
Ga0173483_106629552	3300015077	Soil	MKVKLVLKVIALIGVPALIAAGYCFWLMTVPLSYD*
Ga0137412_101280311	3300015242	Vadose Zone Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTIPLSYDWVYAVVIGFVVS
Ga0134072_101101971	3300015357	Grasslands Soil	MKTKLILKVAGVIGVLALISAGYCFWLMTIPLSYDLVYVVVIGFIVSLG
Ga0132257_1023830011	3300015373	Arabidopsis Rhizosphere	MKTKRVLTVAVLIGVLALISGGYCFWLMNVPLSYRWVPVVVTGFLLAI
Ga0132257_1024378301	3300015373	Arabidopsis Rhizosphere	VEPEKMQEAKTKLALKVVGPVGVLALISAGYCFWLMTVPISYDLVYVVVIGFIVSI
Ga0132257_1045318182	3300015373	Arabidopsis Rhizosphere	MKTKLALKVAGLIGVLALISTGYCFWLMTVPLSYHWVPVVLIGFVVS
Ga0132255_1004625921	3300015374	Arabidopsis Rhizosphere	MKTKLVLTIAVLIGGLALVAAGYCFWLMNVPLSYRWVPVVITGFLLAIF
Ga0132255_1017143591	3300015374	Arabidopsis Rhizosphere	MKTKLVLTIAVLIGVLALISGGYCFWLMTVPLSYDWVPVVLIGFVVA
Ga0182041_105584353	3300016294	Soil	IFEVMKTKLVLTIAVLIGVLALVAGGYCFWLMNVPLSYRWVPA
Ga0182035_121228493	3300016341	Soil	LKVAILVGGLALISAGYCFWLMTVPLSYNWVPVVVTGFLLAVFMFIMSL
Ga0182040_100808542	3300016387	Soil	MKTKLVLTIAVLIGVLALVAGGYCFWLMNVPLSYRWVPA
Ga0182037_119058001	3300016404	Soil	LIFGVMKRKLVLKVAILVGGLALISAGYCFWLMTVPLSYNWV
Ga0184608_100390461	3300018028	Groundwater Sediment	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYD
Ga0137408_13278585	3300019789	Vadose Zone Soil	MKNQTALKVVGLIGVLALISAGYCFWLMTVPLSYDWV
Ga0193704_10197681	3300019867	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVY
Ga0193705_10684031	3300019869	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVYAVVIGFVVSIGVFVISLISSII
Ga0193746_10264132	3300019870	Soil	MKTKLALKVVGLIGVLSLISAGYCFWLMTVPLSYDWVPVVLI
Ga0193722_10841871	3300019877	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIGF
Ga0193727_10840911	3300019886	Soil	VAELVLVMKTKLALKVVGLIGVLALISAGYCFWLMTVPLSHDWVYAVVIGFVVSI
Ga0193730_10477311	3300020002	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVV
Ga0193699_100511985	3300021363	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVPV
Ga0126371_124760731	3300021560	Tropical Forest Soil	MIFGVMKTKLVLTIAVLIGVLSLISGGYCFWLMNVP
Ga0224452_10388891	3300022534	Groundwater Sediment	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVIIGF
Ga0193714_10668942	3300023058	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDRVYA
Ga0247672_10989612	3300024187	Soil	MKTKIVLTIAVVIGVLSLISGGYCFWLMTVPLSYSWVPVVVTGFLLALFMFIISLI
Ga0207685_107620962	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKLLLAIAVLIGVLSLISGGYCFYLMNVPLSYRWVPVVVTGFLLA
Ga0207699_101508581	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKLALKVVGLIGLLALISAGYCFWLMTVPLSYDWVPVVLIGFVLSTGVFVTSLITSFIVLIR
Ga0207693_103037981	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQTKRSLVVTRLISVLAIVAAAYCFWLMTVPLSHDLVVLVVIGFVLSLLV
Ga0207693_106490742	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VKTKLALKVIGLIGVLALISAGYCFWLMTVPLSYDWVPVVLIG
Ga0207663_107934311	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVYAVVIGFVVSIGVFVI
Ga0207687_116570422	3300025927	Miscanthus Rhizosphere	MKIKVVLTTAVLIGVLALISAGYCFWLMDHPLSYRWVPVVITGFLLAIFVFIISLVTL
Ga0207701_109913201	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKVILTIAVLLAAFALISAGYCFWLMDNPLSYRWVPVVITGFLLAIF
Ga0207670_115206412	3300025936	Switchgrass Rhizosphere	MKTKLVLAIAVLIGVLSLISGGYCFYLMNVPLSYRWVPVV
Ga0207704_114601171	3300025938	Miscanthus Rhizosphere	MKTKLVLKVVGLIGALALIAAGYCFWLMTVPLSYDLVSVVVI
Ga0207704_119495031	3300025938	Miscanthus Rhizosphere	MKTKPVLKIAVLIGVLALVSAGYCFWLMTVPLSYHWVPVVLIGFVVSIGVLVISLITSFI
Ga0207691_101617821	3300025940	Miscanthus Rhizosphere	MMKTKRSLIVSGSVSVLALISAAYCFWLMTVPLSYDLVYIVVIGF
Ga0207712_108881021	3300025961	Switchgrass Rhizosphere	MKTKLVLTIAVLIGGLALVAAGYCFWLMNVPLSYRWVPIVITGFLLAIFVLIISLITSFIALMQ
Ga0207668_100102021	3300025972	Switchgrass Rhizosphere	MKTKRFLMVSGLVGVLALISASYCFWLMTIPLSYNLVYVVVIGFIVS
Ga0207683_108844191	3300026121	Miscanthus Rhizosphere	MKTKIVLTIAVVIGVLSLISGGYCFWLMTVPLSYSWVPVVVTGFLLALFMFIASL
Ga0209807_10296861	3300026530	Soil	MKTKLTLKVVGLIGVLALISAGYCFWLMTVPLSYDWVPVVVIGFVVSIGVFVISLIS
Ga0209807_11608953	3300026530	Soil	MRTKRSLMVIALIGVLAFISAAYCFWLMTVPLSYDLVYVVVIGF
Ga0209161_101744832	3300026548	Soil	MKTKLTLKVVGLIGVLALIWAGYCFWLMTVPLSYD
Ga0208475_10206651	3300027018	Soil	MKTKLVLKVAGLIGALALVSAGYCFWLMTVPLSYDSVPVVL
Ga0208475_10311332	3300027018	Soil	MKTKLVVKIAGLIGVLALISAGYCFWLMSVPLSYDWVPVVLIGFVVATGVFVISLITSHVVLI
Ga0209973_10571482	3300027252	Arabidopsis Thaliana Rhizosphere	MKTKLALKVVGVIGVLALISAGYCFWLMTVPLSYQWV
Ga0307282_106071911	3300028784	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWVYAVVIGFVVSIGVFVISLI
Ga0307296_100228511	3300028819	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPLSYDWV
Ga0075386_121652323	3300030916	Soil	MKTKLVLKVAGLIAVLALISTGYCFWLMTVPLSYHW
Ga0075383_112302911	3300030966	Soil	AGLMGMLALISAGYCFWLMTVPLSYDWVPVVLIGFVLAIGVFVSSLITSFIVLIRLRRSR
Ga0170834_1041492421	3300031057	Forest Soil	MKTKVALKVIGLIGVLALISAGYCFCLMTVPLSYDWVPVGLIGFVLSTGVLVIS
Ga0170824_1016455181	3300031231	Forest Soil	VKTKLALTVVGLIGVLALISAGYCFWLMTVPLSYNW
Ga0170824_1217574613	3300031231	Forest Soil	MKTKLALKVVGLVAVLALIPTGYCFWLMTVPLSYHWVPVVLIGFVVSIGVFVI
Ga0170819_107652821	3300031469	Forest Soil	MKTKLVLKGAALIGVLALISAGYCFWLMTVPLSYDWVPVVLIGFVV
Ga0170818_1138083061	3300031474	Forest Soil	LKGAALIGVLALISAGYCLWLMTVPLSYDSVPVVMIGFVVA
Ga0310888_106854832	3300031538	Soil	MKIKVVLTTAVLIGVLALISAGYCFWLMDHPLSYRWVPVVITGFLLAIFVFIISLVT
Ga0310886_103310713	3300031562	Soil	MKIKVVLTTAVLIGVLALISAGYCFWLMDHPLSYRWVPIVITGFLLAIF
Ga0310915_108731611	3300031573	Soil	MNSKLVLKIVGLIGMLALISAGYCFWLITVPLSYDWVP
Ga0310917_102013413	3300031833	Soil	MNSKLVLKIVGLIGMLALISAGYCFWLITVPLSYDWVPVVLIGFVVAIGVFVISLIASFI
Ga0310916_105762382	3300031942	Soil	MNSKLVLKIVGLIGMLALISAGYCFWLITVPLSYDWV
Ga0310885_100678891	3300031943	Soil	MKTKLALKVVGLIGVLALISAGYCFWLMTVPISYRWVPVVLIGFV
Ga0310909_111778931	3300031947	Soil	LTVVVLIGLLALIAAGYCFWLMDNPLSYRWAPVVITDFLLAIFVFIIAFITSFI
Ga0306926_107352501	3300031954	Soil	MKTKLVLTIAVLVGVLALVAAGYCFWLMNVPLSYRWLPIVITVFL
Ga0307472_1025695131	3300032205	Hardwood Forest Soil	MKTKIVLAIAVLIGVLSLISGGYCFYLMNVPLSYRWVPVVVTGFLLAIFMFIMSLITSFVALI
Ga0310914_108401641	3300033289	Soil	MNSKLVLKIVGLIGMLALISAGYCFWLITVPLSYDWVPVVLIGFVVAIGVFVISLIAS

Hidden Markov Model


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