NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F056861

Metagenome / Metatranscriptome Family F056861

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056861
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 43 residues
Representative Sequence MVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGS
Number of Associated Samples 127
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 97.81 %
% of genes from short scaffolds (< 2000 bps) 95.62 %
Associated GOLD sequencing projects 122
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.321 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.978 % of family members)
Environment Ontology (ENVO) Unclassified
(17.518 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.474 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 26.76%    β-sheet: 0.00%    Coil/Unstructured: 73.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF01925TauE 70.80
PF04672Methyltransf_19 2.19
PF00583Acetyltransf_1 1.46
PF13490zf-HC2 0.73
PF00535Glycos_transf_2 0.73
PF08240ADH_N 0.73
PF02788RuBisCO_large_N 0.73
PF13359DDE_Tnp_4 0.73
PF13602ADH_zinc_N_2 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 70.80
COG1850Ribulose 1,5-bisphosphate carboxylase, large subunit, or a RuBisCO-like proteinCarbohydrate transport and metabolism [G] 0.73

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.32 %
UnclassifiedrootN/A11.68 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2209111022|2221219039All Organisms → cellular organisms → Bacteria → Terrabacteria group701Open in IMG/M
3300002245|JGIcombinedJ26739_100578379All Organisms → cellular organisms → Bacteria → Terrabacteria group1000Open in IMG/M
3300003505|JGIcombinedJ51221_10022075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2244Open in IMG/M
3300003505|JGIcombinedJ51221_10433889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300004613|Ga0068937_1109194All Organisms → cellular organisms → Bacteria → Terrabacteria group558Open in IMG/M
3300005168|Ga0066809_10108692All Organisms → cellular organisms → Bacteria → Terrabacteria group686Open in IMG/M
3300005176|Ga0066679_10221149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1213Open in IMG/M
3300005176|Ga0066679_11016334All Organisms → cellular organisms → Bacteria → Terrabacteria group515Open in IMG/M
3300005186|Ga0066676_10765163All Organisms → cellular organisms → Bacteria → Terrabacteria group656Open in IMG/M
3300005337|Ga0070682_101103100All Organisms → cellular organisms → Bacteria → Terrabacteria group664Open in IMG/M
3300005563|Ga0068855_101869711All Organisms → cellular organisms → Bacteria → Terrabacteria group609Open in IMG/M
3300005574|Ga0066694_10381312All Organisms → cellular organisms → Bacteria → Terrabacteria group665Open in IMG/M
3300005844|Ga0068862_102761298All Organisms → cellular organisms → Bacteria → Terrabacteria group502Open in IMG/M
3300006028|Ga0070717_11307743All Organisms → cellular organisms → Bacteria → Terrabacteria group659Open in IMG/M
3300006059|Ga0075017_100787177All Organisms → cellular organisms → Bacteria → Terrabacteria group734Open in IMG/M
3300006086|Ga0075019_10690975All Organisms → cellular organisms → Bacteria → Terrabacteria group645Open in IMG/M
3300006102|Ga0075015_100603755Not Available643Open in IMG/M
3300006172|Ga0075018_10499142All Organisms → cellular organisms → Bacteria → Terrabacteria group634Open in IMG/M
3300006176|Ga0070765_100771197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales909Open in IMG/M
3300006176|Ga0070765_101629643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales607Open in IMG/M
3300006804|Ga0079221_11044084All Organisms → cellular organisms → Bacteria → Terrabacteria group619Open in IMG/M
3300006854|Ga0075425_101655072Not Available721Open in IMG/M
3300009011|Ga0105251_10464416Not Available588Open in IMG/M
3300009090|Ga0099827_11844489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300009092|Ga0105250_10276804All Organisms → cellular organisms → Bacteria → Terrabacteria group722Open in IMG/M
3300009521|Ga0116222_1397895All Organisms → cellular organisms → Bacteria → Terrabacteria group599Open in IMG/M
3300009525|Ga0116220_10501955All Organisms → cellular organisms → Bacteria → Terrabacteria group551Open in IMG/M
3300009665|Ga0116135_1167023All Organisms → cellular organisms → Bacteria → Terrabacteria group828Open in IMG/M
3300009672|Ga0116215_1014691Not Available3739Open in IMG/M
3300010159|Ga0099796_10552281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia518Open in IMG/M
3300010321|Ga0134067_10373362All Organisms → cellular organisms → Bacteria → Terrabacteria group566Open in IMG/M
3300010335|Ga0134063_10677584All Organisms → cellular organisms → Bacteria → Terrabacteria group531Open in IMG/M
3300010341|Ga0074045_10538917All Organisms → cellular organisms → Bacteria → Terrabacteria group748Open in IMG/M
3300010360|Ga0126372_12985346Not Available525Open in IMG/M
3300010371|Ga0134125_11861515All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300010375|Ga0105239_13557188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300010379|Ga0136449_103900016All Organisms → cellular organisms → Bacteria → Terrabacteria group559Open in IMG/M
3300010396|Ga0134126_11255352All Organisms → cellular organisms → Bacteria → Terrabacteria group822Open in IMG/M
3300010398|Ga0126383_13394428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia520Open in IMG/M
3300010401|Ga0134121_11578556Not Available675Open in IMG/M
3300011003|Ga0138514_100032575All Organisms → cellular organisms → Bacteria → Terrabacteria group994Open in IMG/M
3300011107|Ga0151490_1425475All Organisms → cellular organisms → Bacteria → Terrabacteria group1043Open in IMG/M
3300012200|Ga0137382_10796834All Organisms → cellular organisms → Bacteria → Terrabacteria group680Open in IMG/M
3300012210|Ga0137378_10544437All Organisms → cellular organisms → Bacteria → Terrabacteria group1069Open in IMG/M
3300012477|Ga0157336_1037048Not Available511Open in IMG/M
3300012915|Ga0157302_10271438All Organisms → cellular organisms → Bacteria → Terrabacteria group645Open in IMG/M
3300012925|Ga0137419_10734435All Organisms → cellular organisms → Bacteria → Terrabacteria group803Open in IMG/M
3300012958|Ga0164299_10055563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1874Open in IMG/M
3300012971|Ga0126369_12954990All Organisms → cellular organisms → Bacteria → Terrabacteria group557Open in IMG/M
3300012986|Ga0164304_11047251All Organisms → cellular organisms → Bacteria → Terrabacteria group649Open in IMG/M
3300016270|Ga0182036_10930085All Organisms → cellular organisms → Bacteria → Terrabacteria group714Open in IMG/M
3300016341|Ga0182035_10216071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1527Open in IMG/M
3300016357|Ga0182032_10215434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1471Open in IMG/M
3300016387|Ga0182040_11358532All Organisms → cellular organisms → Bacteria → Terrabacteria group601Open in IMG/M
3300017657|Ga0134074_1371044Not Available530Open in IMG/M
3300017823|Ga0187818_10373555All Organisms → cellular organisms → Bacteria → Terrabacteria group631Open in IMG/M
3300017955|Ga0187817_10744135All Organisms → cellular organisms → Bacteria → Terrabacteria group625Open in IMG/M
3300017959|Ga0187779_10932477All Organisms → cellular organisms → Bacteria → Terrabacteria group599Open in IMG/M
3300017972|Ga0187781_10471848All Organisms → cellular organisms → Bacteria → Terrabacteria group899Open in IMG/M
3300017994|Ga0187822_10054000All Organisms → cellular organisms → Bacteria → Terrabacteria group1136Open in IMG/M
3300018034|Ga0187863_10401246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia764Open in IMG/M
3300018044|Ga0187890_10876892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300018047|Ga0187859_10566510All Organisms → cellular organisms → Bacteria → Terrabacteria group637Open in IMG/M
3300018058|Ga0187766_10907251All Organisms → cellular organisms → Bacteria → Terrabacteria group622Open in IMG/M
3300018085|Ga0187772_10906574All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales641Open in IMG/M
3300019879|Ga0193723_1154842All Organisms → cellular organisms → Bacteria → Terrabacteria group611Open in IMG/M
3300020012|Ga0193732_1071585All Organisms → cellular organisms → Bacteria → Terrabacteria group572Open in IMG/M
3300020082|Ga0206353_11547106All Organisms → cellular organisms → Bacteria → Terrabacteria group707Open in IMG/M
3300020170|Ga0179594_10176869All Organisms → cellular organisms → Bacteria → Terrabacteria group796Open in IMG/M
3300020581|Ga0210399_10942558All Organisms → cellular organisms → Bacteria → Terrabacteria group698Open in IMG/M
3300020582|Ga0210395_10024774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces4408Open in IMG/M
3300021171|Ga0210405_10536875All Organisms → cellular organisms → Bacteria → Terrabacteria group915Open in IMG/M
3300021180|Ga0210396_10435968All Organisms → cellular organisms → Bacteria → Terrabacteria group1150Open in IMG/M
3300021402|Ga0210385_10487231All Organisms → cellular organisms → Bacteria → Terrabacteria group934Open in IMG/M
3300021402|Ga0210385_11024257All Organisms → cellular organisms → Bacteria → Terrabacteria group634Open in IMG/M
3300022734|Ga0224571_108762All Organisms → cellular organisms → Bacteria → Terrabacteria group690Open in IMG/M
3300024254|Ga0247661_1014208All Organisms → cellular organisms → Bacteria → Terrabacteria group1356Open in IMG/M
3300024271|Ga0224564_1137097All Organisms → cellular organisms → Bacteria → Terrabacteria group505Open in IMG/M
3300025634|Ga0208589_1061403All Organisms → cellular organisms → Bacteria → Terrabacteria group930Open in IMG/M
3300025925|Ga0207650_11062363All Organisms → cellular organisms → Bacteria → Terrabacteria group689Open in IMG/M
3300025931|Ga0207644_10799551Not Available789Open in IMG/M
3300026078|Ga0207702_12293356Not Available528Open in IMG/M
3300026377|Ga0257171_1037087All Organisms → cellular organisms → Bacteria → Terrabacteria group836Open in IMG/M
3300026446|Ga0257178_1021357All Organisms → cellular organisms → Bacteria → Terrabacteria group773Open in IMG/M
3300026911|Ga0209620_1010086All Organisms → cellular organisms → Bacteria → Terrabacteria group781Open in IMG/M
3300027058|Ga0209111_1006557All Organisms → cellular organisms → Bacteria → Terrabacteria group1187Open in IMG/M
3300027090|Ga0208604_1016146All Organisms → cellular organisms → Bacteria → Terrabacteria group709Open in IMG/M
3300027110|Ga0208488_1033643All Organisms → cellular organisms → Bacteria → Terrabacteria group936Open in IMG/M
3300027119|Ga0209522_1011760All Organisms → cellular organisms → Bacteria → Terrabacteria group957Open in IMG/M
3300027168|Ga0208239_1025255Not Available578Open in IMG/M
3300027652|Ga0209007_1071439Not Available876Open in IMG/M
3300027676|Ga0209333_1023672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1736Open in IMG/M
3300027725|Ga0209178_1387744All Organisms → cellular organisms → Bacteria → Terrabacteria group529Open in IMG/M
3300027775|Ga0209177_10088048All Organisms → cellular organisms → Bacteria → Terrabacteria group962Open in IMG/M
3300027775|Ga0209177_10309868All Organisms → cellular organisms → Bacteria → Terrabacteria group605Open in IMG/M
3300027854|Ga0209517_10731696Not Available505Open in IMG/M
3300027867|Ga0209167_10071244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1738Open in IMG/M
3300027908|Ga0209006_10664560All Organisms → cellular organisms → Bacteria → Terrabacteria group856Open in IMG/M
3300028863|Ga0302218_10162520All Organisms → cellular organisms → Bacteria → Terrabacteria group709Open in IMG/M
3300028906|Ga0308309_10846919All Organisms → cellular organisms → Bacteria → Terrabacteria group794Open in IMG/M
3300029636|Ga0222749_10223837All Organisms → cellular organisms → Bacteria → Terrabacteria group949Open in IMG/M
3300029943|Ga0311340_10511693All Organisms → cellular organisms → Bacteria → Terrabacteria group1070Open in IMG/M
3300030007|Ga0311338_10529930All Organisms → cellular organisms → Bacteria → Terrabacteria group1228Open in IMG/M
3300030509|Ga0302183_10318396All Organisms → cellular organisms → Bacteria → Terrabacteria group600Open in IMG/M
3300030524|Ga0311357_10622558All Organisms → cellular organisms → Bacteria → Terrabacteria group990Open in IMG/M
3300030580|Ga0311355_10570110All Organisms → cellular organisms → Bacteria → Terrabacteria group1073Open in IMG/M
3300031027|Ga0302308_10184079All Organisms → cellular organisms → Bacteria → Terrabacteria group1351Open in IMG/M
3300031199|Ga0307495_10265094Not Available500Open in IMG/M
3300031549|Ga0318571_10176913All Organisms → cellular organisms → Bacteria → Terrabacteria group751Open in IMG/M
3300031682|Ga0318560_10308253All Organisms → cellular organisms → Bacteria → Terrabacteria group853Open in IMG/M
3300031682|Ga0318560_10713386All Organisms → cellular organisms → Bacteria → Terrabacteria group542Open in IMG/M
3300031708|Ga0310686_113612696All Organisms → cellular organisms → Bacteria → Terrabacteria group594Open in IMG/M
3300031708|Ga0310686_117416149Not Available749Open in IMG/M
3300031715|Ga0307476_10538827All Organisms → cellular organisms → Bacteria → Terrabacteria group865Open in IMG/M
3300031715|Ga0307476_10760115All Organisms → cellular organisms → Bacteria → Terrabacteria group717Open in IMG/M
3300031719|Ga0306917_10070407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2423Open in IMG/M
3300031754|Ga0307475_11361703All Organisms → cellular organisms → Bacteria → Terrabacteria group548Open in IMG/M
3300031763|Ga0318537_10189519All Organisms → cellular organisms → Bacteria → Terrabacteria group766Open in IMG/M
3300031771|Ga0318546_11332450All Organisms → cellular organisms → Bacteria → Terrabacteria group504Open in IMG/M
3300031778|Ga0318498_10372275All Organisms → cellular organisms → Bacteria → Terrabacteria group636Open in IMG/M
3300031781|Ga0318547_10484530All Organisms → cellular organisms → Bacteria → Terrabacteria group763Open in IMG/M
3300031794|Ga0318503_10270078All Organisms → cellular organisms → Bacteria → Terrabacteria group552Open in IMG/M
3300031819|Ga0318568_10527397All Organisms → cellular organisms → Bacteria → Terrabacteria group736Open in IMG/M
3300031819|Ga0318568_10611792All Organisms → cellular organisms → Bacteria → Terrabacteria group678Open in IMG/M
3300031819|Ga0318568_11005261All Organisms → cellular organisms → Bacteria → Terrabacteria group515Open in IMG/M
3300031832|Ga0318499_10256547All Organisms → cellular organisms → Bacteria → Terrabacteria group678Open in IMG/M
3300031897|Ga0318520_10461979All Organisms → cellular organisms → Bacteria → Terrabacteria group781Open in IMG/M
3300031954|Ga0306926_12155602All Organisms → cellular organisms → Bacteria → Terrabacteria group622Open in IMG/M
3300032001|Ga0306922_10219725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2040Open in IMG/M
3300032044|Ga0318558_10055334All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1767Open in IMG/M
3300032052|Ga0318506_10444551All Organisms → cellular organisms → Bacteria → Terrabacteria group575Open in IMG/M
3300032074|Ga0308173_10483409Not Available1106Open in IMG/M
3300032089|Ga0318525_10302116All Organisms → cellular organisms → Bacteria → Terrabacteria group822Open in IMG/M
3300032261|Ga0306920_100227303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2784Open in IMG/M
3300032770|Ga0335085_11681597All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300032829|Ga0335070_10914234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer812Open in IMG/M
3300032955|Ga0335076_10781587All Organisms → cellular organisms → Bacteria → Terrabacteria group836Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.84%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.11%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.38%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.38%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.92%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.92%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.92%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.19%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.19%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.19%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.19%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.19%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.46%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.46%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.73%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.73%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.73%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.73%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.73%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.73%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.73%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.73%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.73%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2209111022Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichmentEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004613Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009672Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaGEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300022734Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3Host-AssociatedOpen in IMG/M
3300024254Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02EnvironmentalOpen in IMG/M
3300024271Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5EnvironmentalOpen in IMG/M
3300025634Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026446Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-BEnvironmentalOpen in IMG/M
3300026911Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027058Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027090Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)EnvironmentalOpen in IMG/M
3300027110Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)EnvironmentalOpen in IMG/M
3300027119Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027168Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030509Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
22220656712209111022Grass SoilMLAVLIIAILAVSYVVSTRIHPLRKCPTCNMSGRHFGAVYKGTYRRCRRC
JGIcombinedJ26739_10057837923300002245Forest SoilMVALVVIVIVGLSYVVSTRIHPLRKCPTCNMSGRHFGSFYKGSFRPCR
JGIcombinedJ51221_1002207513300003505Forest SoilMLVLIVVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGGVFTGSY
JGIcombinedJ51221_1043388913300003505Forest SoilMLAVLIIAIVAVSYVVSTRIHPLRKCPTCNMSGRHFGAVYKGTYRRCR
Ga0068937_110919423300004613Peatlands SoilMVVVLVIAIVAVGYIVSTRIHPLRKCPTCNMTGRHFGGIYK
Ga0066809_1010869213300005168SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRR
Ga0066679_1022114923300005176SoilMSALLVALAVFFGGYLISLRIHPLRRCPVCKMTGRHFGSVF
Ga0066679_1101633423300005176SoilMVAVLIIAILAVSYVVSTRIHPLRKCPTCNMSGRHFGAIY
Ga0066676_1076516313300005186SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVY
Ga0070682_10110310013300005337Corn RhizosphereMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRKCS
Ga0068855_10186971123300005563Corn RhizosphereMVAVLIIAILAVSYVVSTRIHPLRKCPTCNMSGRHF
Ga0066694_1038131223300005574SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFG
Ga0068862_10276129823300005844Switchgrass RhizosphereMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGG
Ga0070717_1130774323300006028Corn, Switchgrass And Miscanthus RhizosphereMVLLLVIVIVGVTYIVSTRINPLRKCPSCNMTGRHFGG
Ga0075017_10078717723300006059WatershedsMVLVIIIAIVAVGYAVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRT
Ga0075019_1069097523300006086WatershedsMVLVIIIAIVAVGYVVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRTCDGSGRRDR
Ga0075015_10060375513300006102WatershedsMVVVVLIAIVAVGYIVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRTCD
Ga0075018_1049914223300006172WatershedsMIMVLIIAIIAVGYIVSTRIHPLRKCPTCNMSGRHF
Ga0070765_10077119723300006176SoilMLVLVIVIIAVGYVVSVRIHPLRKCPRCNMSGRHFGAV
Ga0070765_10162964323300006176SoilMLVLIVVIIAVGYLVSLRIHPLRKCPRCNMSGRHFG
Ga0079221_1104408423300006804Agricultural SoilMVLILIIAIIAVSYIVSTRIHPLRKCPTCNMTGRHFGSVYKGGYRRCRT
Ga0075425_10165507213300006854Populus RhizosphereMVAVFIIAIVAVSYIVSTRIHPLTKCPTCNMSGRHGG
Ga0105251_1046441613300009011Switchgrass RhizosphereMVAVFIIAIVAVSYIVSTRIHPLTKCPTCNMSGRHGGGVYKGS
Ga0099827_1184448913300009090Vadose Zone SoilMVAVVIIAIVAVSYIVSTRINPLRKCPTCNMTGRHFGGVYKGGYRRCRRCG
Ga0105250_1027680413300009092Switchgrass RhizosphereMVAVLIIAIIAVSYVVSIRIHPLRKCPTYNMSGRHFGGVYKGS
Ga0116222_139789513300009521Peatlands SoilMVLVIIIAIVAVGYAVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRTCDGSGRRDRV
Ga0116220_1050195523300009525Peatlands SoilMVVVIVIAIVAVGYDVSTRIHPLRKCPTCNMTGRHFG
Ga0116135_116702323300009665PeatlandMVALVIVVIVGLGYVVSTRIHPLKKCPTCNMTGRHFG
Ga0116215_101469113300009672Peatlands SoilMVVVLVIAIVAVGYIVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRTCDG
Ga0099796_1055228123300010159Vadose Zone SoilMVAVLVIAIIAVSYIVSTRIHPLRKCHTCNMTGRHLGSVYKGSF
Ga0134067_1037336213300010321Grasslands SoilMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGG
Ga0134063_1067758413300010335Grasslands SoilMVAVLIIAIIAVSYIVSTRIHPLRKCPTCNMSGRHFGSVYKG
Ga0074045_1053891723300010341Bog Forest SoilMVVVIVIAIVAVGYAVSTRIHPLRKCPTCNMTGRHFGGV
Ga0126372_1298534613300010360Tropical Forest SoilMIMVLIIAIIAVSYIVSTRIHPLRKCPTCNMSGRHFGGVYKDSYRRCR
Ga0134125_1186151523300010371Terrestrial SoilMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRKCSGRG
Ga0105239_1355718813300010375Corn RhizosphereMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRH
Ga0136449_10390001613300010379Peatlands SoilMVLVIIIAIVAVGYAVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRTCDGSG
Ga0134126_1125535213300010396Terrestrial SoilMVAVLIIAILAVSYVVSTRIHPLRKCPTCNMSGRHFGA
Ga0126383_1339442813300010398Tropical Forest SoilMVLVLIIAIIAVSYIVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCR
Ga0134121_1157855623300010401Terrestrial SoilMVAILIIAVIAVSYVVSTRIHPLRKCPTCNMSGRHFGGIYKGWYRRCRK*
Ga0138514_10003257513300011003SoilMVAVLIIAIVAVSYVVSTRIHPLRKCPTCNMSGTHFGGIYK
Ga0151490_142547523300011107SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSY
Ga0137382_1079683413300012200Vadose Zone SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCR
Ga0137378_1054443713300012210Vadose Zone SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYR
Ga0157336_103704813300012477Arabidopsis RhizosphereMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGS
Ga0157302_1027143813300012915SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGS
Ga0137419_1073443513300012925Vadose Zone SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRRFGAIYK
Ga0164299_1005556333300012958SoilMVAVLIIAVIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRK*
Ga0126369_1295499023300012971Tropical Forest SoilMIMVLVIAIIAVSYIVSTRIHPLRKCPTCNMSGRHF
Ga0164304_1104725123300012986SoilMVAVLIIAVIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRK
Ga0182036_1093008513300016270SoilMIMVLVIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGS
Ga0182035_1021607113300016341SoilMVAVVLIAIIAVSYVISTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRR
Ga0182032_1021543413300016357SoilMLILIIVILAVGYLVSLRIHPLRKCPRCNMSGRHFGSVFTG
Ga0182040_1135853223300016387SoilMVLVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGSIYKGGYRRCRTCGG
Ga0134074_137104413300017657Grasslands SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRRCS
Ga0187818_1037355523300017823Freshwater SedimentMLILIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHF
Ga0187817_1074413513300017955Freshwater SedimentMLILIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGAV
Ga0187779_1093247713300017959Tropical PeatlandMVAVLVIAIIAVGYIVSTRIHPLKKCPTCNMSGRHFG
Ga0187781_1047184823300017972Tropical PeatlandMLAVLVIAIIAVGYIVSTRIHPLRKCPTCNMTGRHFG
Ga0187822_1005400023300017994Freshwater SedimentMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRRC
Ga0187863_1040124623300018034PeatlandMVAVFIIAIVAVSYIVSTRIHPLTKCPTCNMSGRHSAGVYKRSFRRCRRCAGTGRR
Ga0187890_1087689213300018044PeatlandMVALLVVVIVGLSYVVSTRIHPLRKCPTCNMSGRHFGSVYKGS
Ga0187859_1056651013300018047PeatlandMAALVLVVIIGVGYLVSTRIHPLRKCPTCNMTGRHFGSV
Ga0187766_1090725123300018058Tropical PeatlandMIMVLVIAIIAVSYIVSTRIHPLRKCPTCNMSGRHFGGVYKGS
Ga0187772_1090657413300018085Tropical PeatlandMGWLILIAVIVLVGYAISTRLHPLKRCRTCKGTGRLFGNIYKGSYRRCAKCEGR
Ga0193723_115484213300019879SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRRFGGVYKGSYR
Ga0193732_107158513300020012SoilMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFASVYKGSYRRCRRCAG
Ga0206353_1154710623300020082Corn, Switchgrass And Miscanthus RhizosphereMVAVLIIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYK
Ga0179594_1017686923300020170Vadose Zone SoilMVAVLIIAILAVSYVVSTRIHPLRKCPTCNMSGRRFGAIY
Ga0210399_1094255823300020581SoilMIMVLIIAIIAVGYIVSTRIHPLRKCPTCNMSGRHFGGIYKGSYRRCRR
Ga0210395_1002477443300020582SoilMVVVVLIAIVAVGYIVSTRIHPLRKCSTCNMTGRHFGGIYKGSYRRLPDV
Ga0210405_1053687513300021171SoilMVAVVLIAIIVVGYIVSTRIHPLKKCPTCNMSGRHFGGV
Ga0210396_1043596813300021180SoilMVVVILIAIVAVGYAVSTRIHPLRKCPTCNMTGRH
Ga0210385_1048723123300021402SoilMVVVILIAIVAVGYAVSTRIHPLRKCPTCNMTGRHFGGIYKGSYRRCRTCDGS
Ga0210385_1102425723300021402SoilVRRNSMVALVIIVLAVASYAVSTRIHPLRKCPTCNSSGRHFASIYR
Ga0224571_10876223300022734RhizosphereMIVVVLIAIVAVGYIVSTRIHPLRKCSTCNMTGRHFGGVYKGSYRRCRTC
Ga0247661_101420813300024254SoilMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRC
Ga0224564_113709723300024271SoilMVVVILIAIVAVGYAISTRIHPLRKCPTCNMTGRHFG
Ga0208589_106140323300025634Arctic Peat SoilMVAVVLIVIVGVGYVVSTRIHPLRKCPTCNMTGRHFGGVYKGSYRRCRT
Ga0207650_1106236323300025925Switchgrass RhizosphereMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYR
Ga0207644_1079955123300025931Switchgrass RhizosphereMVAVFIIAIVAVSYIVSTRIHPLTKCPTCNMSGRHG
Ga0207702_1229335623300026078Corn RhizosphereMVAVLIIAIVAVSYIVSTRIHPLTKCPTCNMSGRH
Ga0257171_103708723300026377SoilMVAVLVIAIIAVSYVVSTRIHPLRKCPTCNMSGRLF
Ga0257178_102135723300026446SoilMVAVLVIAIIAVSYVVSTRIHPLRKCPTCNMSGRHFGGIYKGSYRRC
Ga0209620_101008623300026911Forest SoilMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGIYKGSYRRCRKCS
Ga0209111_100655723300027058Forest SoilMVAVLIIAVIAVSYVVSTRIHPLRKCPTCNMSGRHFG
Ga0208604_101614623300027090Forest SoilMLILVIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGAVFP
Ga0208488_103364323300027110Forest SoilMVALVVIVIVGLSYVVSTRIHPLRKCPTCNMSGRHFGSFYKGSFRP
Ga0209522_101176023300027119Forest SoilMVAVLIIAVIAVSYVVSTRIHPLRKCPTCNMSGRHFGGIYKGSYRRCRKC
Ga0208239_102525523300027168Forest SoilMVYVLIAIVAGGYLVSLRIHPLRKCPTCKMTGRHFGGVFTNS
Ga0209007_107143913300027652Forest SoilMVLLVIVIVAVGYLVSLRIHPLRKCPTCKMTGRHFGGVFTNSFRP
Ga0209333_102367213300027676Forest SoilMVLLLIVIVAVVYLVSLRIHPLRKCRTCKMTGRHFGGMFTYSMRPCRRCRGSGRRDRLG
Ga0209178_138774423300027725Agricultural SoilMLAVLIIAIVAVSYVVSTRIHPLRKCPTCNMSGRHFGAVYK
Ga0209177_1008804823300027775Agricultural SoilMVAVLIIAVIAVSYVVSTRIHPLRKCPTCNMSGRHF
Ga0209177_1030986813300027775Agricultural SoilMVAVLIIAAIAVSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRKCSGRGQ
Ga0209517_1073169623300027854Peatlands SoilMVAVIIIAIVAVSYIVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRC
Ga0209167_1007124433300027867Surface SoilMLVLIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHYGAF
Ga0209006_1066456023300027908Forest SoilMLLVVIAIFAGGYLVSLRIHPLRKCPTCKMTGRHFGDVYKG
Ga0302218_1016252023300028863PalsaMVALVVVVIVGLSYVVSTRIHPLRKCPTCNMTGRHFGSVFKGSYRPCRTCSGSG
Ga0308309_1084691913300028906SoilMVAVVVIAIVAVSYIVSTRVHPLRKCPTCNMSGRHF
Ga0222749_1022383713300029636SoilMLAVLIIAIVAVSYVVSTRIHPLRKCPTCNMSGRHFGAVYKGTYRRCRR
Ga0311340_1051169313300029943PalsaMVALVIVVIVGLSYVVSTRIHPLRKCPTCNMTGRHFGGVFKGSY
Ga0311338_1052993023300030007PalsaMVALLVVVIVGLSYVVSTRIHPLTKCPTCKMTGRHFGSVYKGSHRPCRT
Ga0302183_1031839623300030509PalsaMVALVVVVIVGLGYVVSTRIHPLRKCPTCNMTGRHF
Ga0311357_1062255813300030524PalsaMVALVIVVIVGLSYVVSTRIHPLRKCPTCNMTGRHFGGFYKGSFRPCRTCGG
Ga0311355_1057011023300030580PalsaMVALVIVVIVGLSYVVSTRIHPLRKCPTCNMTGRHFGG
Ga0302308_1018407913300031027PalsaMVVVLIVVLVGLSYVVSTRIHPLRKCPTCNMSGRH
Ga0307495_1026509413300031199SoilMVAVLIIAIIAGSYVVSTRIHPLRKCPTCNMSGRHFGGVYKGSYRRCRRCSGRG
Ga0318571_1017691323300031549SoilMIMVLVIAIIAVSYIVSTRIHPLRKCPTCNMSGRHFGGVYKGSY
Ga0318560_1030825313300031682SoilMVLVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGGIYK
Ga0318560_1071338623300031682SoilMLILVIAVIVVGYLVSLRIHPLRKCHSCNMSGRHFGSVFS
Ga0310686_11361269623300031708SoilMLVLVIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGAVFPG
Ga0310686_11741614923300031708SoilMVAVILVVIVTYIVSTRIHPLRKCPTCNMTGRHFGGVYKGSFRRCRRCDGTGR
Ga0307476_1053882723300031715Hardwood Forest SoilMLILIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGAVFP
Ga0307476_1076011513300031715Hardwood Forest SoilMLVLIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFG
Ga0306917_1007040713300031719SoilMLILIIVILAVGYLVSLRIHPLRKCPRCNMSGRHF
Ga0307475_1136170313300031754Hardwood Forest SoilMLVLIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGSFFT
Ga0318537_1018951913300031763SoilMIMVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGSVYKGGYRRC
Ga0318546_1133245013300031771SoilMLIFIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFG
Ga0318498_1037227513300031778SoilMIMVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGSV
Ga0318547_1048453023300031781SoilMLILIIVILAVGYLVSLRIHPLRKCPRCNMSGRHFG
Ga0318503_1027007813300031794SoilMVLVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRH
Ga0318568_1052739713300031819SoilMIMVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGSVYKGGYR
Ga0318568_1061179213300031819SoilMVLVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGGIYKGS
Ga0318568_1100526123300031819SoilMLILVIAVIVVGYLVSLRIHPLRKCHSCNMSGRHFG
Ga0318499_1025654723300031832SoilMIMVLIIAIIAVSYVVSTRIHPLRKCPTCNMTGRHFGSVYKGGYRRCRTCDGTGR
Ga0318520_1046197913300031897SoilMVAVVLIAIIAVSYVISTRIHPLRKCPTCNMSGRHFGGVYKGS
Ga0306926_1215560223300031954SoilMIVVLAIAIVVVSYMVSTRIHPLRKCPSCNMTGRHFGSFYK
Ga0306922_1021972533300032001SoilMLIFIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGSVFT
Ga0318558_1005533433300032044SoilMLILIIVIIAVGYLVSLRIHPLRKCPRCNMSGRHFGSV
Ga0318506_1044455123300032052SoilMLILIIVILAVGYLVSLRIHPLRKCPRCNMSGRHFGSVFT
Ga0308173_1048340923300032074SoilMVAVFIIAIVAVSYIVSTRIHPLTKCPTCNMSGRHGGGVYKGSFRRCRKCAGSGRRDRV
Ga0318525_1030211623300032089SoilMVAVVLIAIIAVSYVISTRIHPLRKCPTCNMSGRHFGGVYKGSY
Ga0306920_10022730353300032261SoilMLILIIVIIAVGYLVSLRIHPLRKCTRCNMSGRHFG
Ga0335085_1168159713300032770SoilMIMVLIIAIIAVSYIVSTRIHPLRKCPTCNMSGRHFGGIYKGSYRRCRR
Ga0335070_1091423413300032829SoilMVAVLIIAIIAVSYIVSTRIHPLTKCPTCNMSGRHAGGVYKGSFRRCRKCAGSGRRDRVG
Ga0335076_1078158723300032955SoilMLVLIIVIIAVGYLVSLRLHPLRKCPTCNMSGRHYG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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