Metagenome / Metatranscriptome Family F056856

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056856
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	68 residues
Representative Sequence	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDVAKQLGIFGQ
Number of Associated Samples	105
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	30.66 %
% of genes from short scaffolds (< 2000 bps)	81.75 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.182 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.817 % of family members)
Environment Ontology (ENVO)	Unclassified (35.766 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.044 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.67% β-sheet: 6.12% Coil/Unstructured: 60.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF12071	DUF3551	3.65
PF00589	Phage_integrase	1.46
PF06629	MipA	1.46
PF03928	HbpS-like	1.46
PF00106	adh_short	0.73
PF06496	DUF1097	0.73
PF07369	DUF1488	0.73
PF06411	HdeA	0.73
PF01322	Cytochrom_C_2	0.73
PF01609	DDE_Tnp_1	0.73
PF04773	FecR	0.73
PF06078	DUF937	0.73
PF02583	Trns_repr_metal	0.73
PF07758	DUF1614	0.73
PF00313	CSD	0.73
PF13546	DDE_5	0.73
PF05930	Phage_AlpA	0.73
PF13187	Fer4_9	0.73
PF13683	rve_3	0.73
PF13505	OMP_b-brl	0.73
PF01207	Dus	0.73
PF13827	DUF4189	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG3713	Outer membrane scaffolding protein for murein synthesis, MipA/OmpV family	Cell wall/membrane/envelope biogenesis [M]	1.46
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.73
COG1937	DNA-binding transcriptional regulator, FrmR family	Transcription [K]	0.73
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.73
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.73
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.73
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.73
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.73
COG3909	Cytochrome c556	Energy production and conversion [C]	0.73
COG4089	Uncharacterized membrane protein	Function unknown [S]	0.73
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.73
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.73
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
All Organisms	root	All Organisms	24.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
cellular organisms	root	All Organisms → cellular organisms	24.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17.52 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.76 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	2.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.38 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	2.92 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.73 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.73 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.73 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.73 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.65 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	2.92 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.73 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.73 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.73 %
Filomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	2.92 %
Azorhizobium caulinodans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans	0.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.73 %
Candidatus Filomicrobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	0.73 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.73 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.73 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Caulobacter sp. K31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	2.92 %
Burkholderia sp. UYPR1.413	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. UYPR1.413	0.73 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.73 %
Azorhizobium caulinodans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans	0.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.73 %
Candidatus Filomicrobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	0.73 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.18 %
Caulobacter sp. K31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	2.92 %
Rhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp.	0.73 %
Burkholderia sp. UYPR1.413	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. UYPR1.413	0.73 %
Azorhizobium caulinodans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans	0.73 %
Bradyrhizobium manausense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	0.73 %
Candidatus Filomicrobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	0.73 %
Bradyrhizobium archetypum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	0.73 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10086690	Not Available	1235	Open in IMG/M
3300003505\|JGIcombinedJ51221_10398512	Not Available	559	Open in IMG/M
3300005332\|Ga0066388_103262977	Not Available	829	Open in IMG/M
3300005332\|Ga0066388_105277013	Not Available	655	Open in IMG/M
3300005435\|Ga0070714_100178529	Not Available	1931	Open in IMG/M
3300005435\|Ga0070714_101250271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium manausense	725	Open in IMG/M
3300005436\|Ga0070713_101520654	Not Available	650	Open in IMG/M
3300005764\|Ga0066903_102183381	Not Available	1067	Open in IMG/M
3300006041\|Ga0075023_100640647	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006047\|Ga0075024_100109370	Not Available	1221	Open in IMG/M
3300006102\|Ga0075015_100966076	Not Available	520	Open in IMG/M
3300006172\|Ga0075018_10665453	Not Available	560	Open in IMG/M
3300006175\|Ga0070712_100622394	Not Available	915	Open in IMG/M
3300006175\|Ga0070712_101515683	All Organisms → cellular organisms → Bacteria → Proteobacteria	586	Open in IMG/M
3300006354\|Ga0075021_10874803	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006604\|Ga0074060_10010097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1070	Open in IMG/M
3300006804\|Ga0079221_11468339	Not Available	546	Open in IMG/M
3300006806\|Ga0079220_11605711	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300006893\|Ga0073928_10527786	Not Available	843	Open in IMG/M
3300006914\|Ga0075436_100562193	Not Available	838	Open in IMG/M
3300007982\|Ga0102924_1022568	All Organisms → cellular organisms → Bacteria → Proteobacteria	4496	Open in IMG/M
3300010046\|Ga0126384_10920478	Not Available	791	Open in IMG/M
3300010048\|Ga0126373_11486730	Not Available	743	Open in IMG/M
3300010048\|Ga0126373_12558137	Not Available	569	Open in IMG/M
3300010162\|Ga0131853_11155810	Not Available	583	Open in IMG/M
3300010358\|Ga0126370_12666826	Not Available	501	Open in IMG/M
3300010360\|Ga0126372_11523087	Not Available	705	Open in IMG/M
3300010361\|Ga0126378_10962436	Not Available	958	Open in IMG/M
3300010376\|Ga0126381_100522988	Not Available	1677	Open in IMG/M
3300010863\|Ga0124850_1015927	All Organisms → cellular organisms → Bacteria → Proteobacteria	2395	Open in IMG/M
3300011120\|Ga0150983_12469233	Not Available	547	Open in IMG/M
3300012149\|Ga0153941_1084910	Not Available	515	Open in IMG/M
3300012971\|Ga0126369_10869413	Not Available	986	Open in IMG/M
3300012984\|Ga0164309_11421603	Not Available	592	Open in IMG/M
3300015371\|Ga0132258_10564368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2854	Open in IMG/M
3300016270\|Ga0182036_10860173	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300016270\|Ga0182036_11523814	Not Available	562	Open in IMG/M
3300016294\|Ga0182041_10114213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2014	Open in IMG/M
3300016319\|Ga0182033_10785840	Not Available	838	Open in IMG/M
3300016341\|Ga0182035_10837124	Not Available	809	Open in IMG/M
3300016387\|Ga0182040_10279605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1267	Open in IMG/M
3300016404\|Ga0182037_10150094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1755	Open in IMG/M
3300016422\|Ga0182039_10665541	Not Available	915	Open in IMG/M
3300016422\|Ga0182039_10833915	Not Available	820	Open in IMG/M
3300016422\|Ga0182039_10912971	Not Available	784	Open in IMG/M
3300017927\|Ga0187824_10374314	Not Available	516	Open in IMG/M
3300017936\|Ga0187821_10498492	Not Available	508	Open in IMG/M
3300017966\|Ga0187776_11517535	Not Available	515	Open in IMG/M
3300017970\|Ga0187783_10024433	Not Available	4474	Open in IMG/M
3300017970\|Ga0187783_10571277	Not Available	818	Open in IMG/M
3300017974\|Ga0187777_10504936	Not Available	845	Open in IMG/M
3300017993\|Ga0187823_10327018	Not Available	540	Open in IMG/M
3300017994\|Ga0187822_10086435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	938	Open in IMG/M
3300018060\|Ga0187765_10773387	Not Available	638	Open in IMG/M
3300020579\|Ga0210407_10052482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium caulinodans	3047	Open in IMG/M
3300020579\|Ga0210407_10075892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2527	Open in IMG/M
3300020579\|Ga0210407_10140233	Not Available	1858	Open in IMG/M
3300020583\|Ga0210401_10549296	Not Available	1017	Open in IMG/M
3300021088\|Ga0210404_10174631	Not Available	1140	Open in IMG/M
3300021178\|Ga0210408_10457269	Not Available	1016	Open in IMG/M
3300021405\|Ga0210387_10684412	Not Available	909	Open in IMG/M
3300021406\|Ga0210386_11015317	Not Available	707	Open in IMG/M
3300021407\|Ga0210383_10860785	Not Available	774	Open in IMG/M
3300021420\|Ga0210394_10040363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4123	Open in IMG/M
3300021432\|Ga0210384_11576689	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300021479\|Ga0210410_10514314	Not Available	1068	Open in IMG/M
3300021479\|Ga0210410_11333034	Not Available	610	Open in IMG/M
3300021559\|Ga0210409_11180401	Not Available	641	Open in IMG/M
3300022557\|Ga0212123_10209461	Not Available	1436	Open in IMG/M
3300022557\|Ga0212123_10226710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1360	Open in IMG/M
3300022557\|Ga0212123_10940125	Not Available	505	Open in IMG/M
3300022731\|Ga0224563_1029916	Not Available	503	Open in IMG/M
3300024225\|Ga0224572_1035105	Not Available	952	Open in IMG/M
3300024225\|Ga0224572_1082488	Not Available	593	Open in IMG/M
3300024227\|Ga0228598_1029263	Not Available	1083	Open in IMG/M
3300025915\|Ga0207693_11145352	Not Available	589	Open in IMG/M
3300026817\|Ga0207775_104346	Not Available	1153	Open in IMG/M
3300026849\|Ga0207804_107001	Not Available	1078	Open in IMG/M
3300026859\|Ga0207859_1006986	Not Available	1041	Open in IMG/M
3300026862\|Ga0207724_1024222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp.	518	Open in IMG/M
3300026865\|Ga0207746_1008535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	922	Open in IMG/M
3300026982\|Ga0207854_1008149	Not Available	1433	Open in IMG/M
3300026997\|Ga0207784_1004086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1751	Open in IMG/M
3300027330\|Ga0207777_1092295	Not Available	523	Open in IMG/M
3300027765\|Ga0209073_10425596	Not Available	548	Open in IMG/M
3300027889\|Ga0209380_10742274	Not Available	560	Open in IMG/M
3300027910\|Ga0209583_10015914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium archetypum	2307	Open in IMG/M
3300028906\|Ga0308309_11294963	Not Available	627	Open in IMG/M
3300031564\|Ga0318573_10108214	Not Available	1432	Open in IMG/M
3300031564\|Ga0318573_10460190	Not Available	684	Open in IMG/M
3300031682\|Ga0318560_10617569	Not Available	587	Open in IMG/M
3300031708\|Ga0310686_100388585	Not Available	1064	Open in IMG/M
3300031720\|Ga0307469_11568754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300031744\|Ga0306918_10678715	Not Available	806	Open in IMG/M
3300031780\|Ga0318508_1068146	Not Available	961	Open in IMG/M
3300031792\|Ga0318529_10447486	Not Available	601	Open in IMG/M
3300031833\|Ga0310917_10741759	Not Available	664	Open in IMG/M
3300031879\|Ga0306919_10028825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3473	Open in IMG/M
3300031879\|Ga0306919_10068771	All Organisms → cellular organisms → Bacteria → Proteobacteria	2406	Open in IMG/M
3300031890\|Ga0306925_10976764	Not Available	865	Open in IMG/M
3300031890\|Ga0306925_12081616	Not Available	532	Open in IMG/M
3300031910\|Ga0306923_10894025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	973	Open in IMG/M
3300031910\|Ga0306923_11263426	Not Available	785	Open in IMG/M
3300031912\|Ga0306921_10640602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. K31	1226	Open in IMG/M
3300031942\|Ga0310916_10177496	Not Available	1773	Open in IMG/M
3300031942\|Ga0310916_11331177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031942\|Ga0310916_11482404	Not Available	554	Open in IMG/M
3300031947\|Ga0310909_10589210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	929	Open in IMG/M
3300031947\|Ga0310909_10897049	Not Available	728	Open in IMG/M
3300031954\|Ga0306926_10283893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2050	Open in IMG/M
3300031954\|Ga0306926_11696707	Not Available	721	Open in IMG/M
3300031954\|Ga0306926_11705096	Not Available	719	Open in IMG/M
3300031962\|Ga0307479_11125171	Not Available	751	Open in IMG/M
3300032001\|Ga0306922_11472991	Not Available	682	Open in IMG/M
3300032044\|Ga0318558_10156936	Not Available	1097	Open in IMG/M
3300032059\|Ga0318533_10237363	Not Available	1314	Open in IMG/M
3300032059\|Ga0318533_10871838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300032063\|Ga0318504_10435428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	626	Open in IMG/M
3300032076\|Ga0306924_10611080	Not Available	1233	Open in IMG/M
3300032180\|Ga0307471_100614538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. UYPR1.413	1247	Open in IMG/M
3300032261\|Ga0306920_100812100	Not Available	1372	Open in IMG/M
3300032261\|Ga0306920_101261463	Not Available	1065	Open in IMG/M
3300033289\|Ga0310914_10446656	Not Available	1170	Open in IMG/M
3300033290\|Ga0318519_10904986	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.89%
Host-Associated	Host-Associated	5.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.75%
Aquatic	Environmental → Aquatic	13.14%
Plants	Host-Associated → Plants	3.65%
Arthropoda	Host-Associated → Arthropoda	0.73%
Fungi	Host-Associated → Fungi	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.02%
Sediment	Environmental → Aquatic → Sediment	5.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.38%
Freshwater	Environmental → Aquatic → Freshwater	2.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.92%
Peat	Environmental → Terrestrial → Peat	0.73%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%
Mycelium	Host-Associated → Fungi → Mycelium	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.58%
Loam	Environmental → Terrestrial → Soil → Loam	16.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.84%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.84%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.84%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.19%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012149	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ025 MetaG	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026865	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 75 (SPAdes)	Environmental	Open in IMG/M
3300026982	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 7 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02907710	2070309004	Green-Waste Compost	KMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
JGIcombinedJ51221_100866902	3300003505	Forest Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEGLAKQLGIITQR*
JGIcombinedJ51221_103985121	3300003505	Forest Soil	KDTQVSLHRSKMGRVDKMIRSGRFEDLYQELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR*
Ga0066388_1032629772	3300005332	Tropical Forest Soil	VDKDTHVSLHRSKVGRIDKMMKSGRFEDLYREFRAVPSITRSEYFMMEAGRKIGLQEIEDVAKQLGIFGQQ*
Ga0066388_1052770131	3300005332	Tropical Forest Soil	RSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR*
Ga0070714_1001785294	3300005435	Agricultural Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLG
Ga0070714_1012502711	3300005435	Agricultural Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAVPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR*
Ga0070713_1015206541	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAK
Ga0066903_1021833811	3300005764	Tropical Forest Soil	MDKDTQVSLHRSKVGRADKMIKSGRFGDLYREFAALPSSTRSEYFIMDAGRRVGPQGIDDLAKQLGIRR*
Ga0075023_1006406471	3300006041	Watersheds	MDKDTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR*
Ga0075024_1001093701	3300006047	Watersheds	MDKGTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR*
Ga0075015_1009660761	3300006102	Watersheds	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR*
Ga0075018_106654531	3300006172	Watersheds	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR*
Ga0070712_1006223943	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKLLGIHGQPGR*
Ga0070712_1015156832	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDKDTHVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR*
Ga0075021_102178602	3300006354	Watersheds	VDKMIRSGRFEDLYRELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR*
Ga0075021_108748031	3300006354	Watersheds	AKEAPMDKGTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR*
Ga0074060_100100972	3300006604	Soil	MDKGTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAIAPSTQSEYFMMEAGRKVGPQEIEDSAKLLGIVGQ
Ga0079221_114683391	3300006804	Agricultural Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFENLYREFKAVPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR*
Ga0079220_112965993	3300006806	Agricultural Soil	DRMIKSGRFEDLSREFKAVAPSTQSEYFMMEAGRKIGAQEIEGWVKQLGIVGQ*
Ga0079220_116057111	3300006806	Agricultural Soil	THVSLHRSRMGRIDKMLKSGRFEDLYREFKAVPSSTQSEYFMMEAGRKVGPREIEDMAMRLGIHGQPGR*
Ga0073928_105277862	3300006893	Iron-Sulfur Acid Spring	MDKDTHVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKIGPQEIEDLAKQLGIIGQR*
Ga0075436_1005621933	3300006914	Populus Rhizosphere	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIENMANLLGIHGQPSRC*
Ga0102924_10225682	3300007982	Iron-Sulfur Acid Spring	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRPEYFMMEAGRKVGPQEIEDLAKQLGIIGQR*
Ga0102924_10788222	3300007982	Iron-Sulfur Acid Spring	MIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR*
Ga0126384_109204781	3300010046	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR*
Ga0126373_114867301	3300010048	Tropical Forest Soil	MGRIDKMLKSGRFEDLYREFKAVPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPG
Ga0126373_125581372	3300010048	Tropical Forest Soil	MDQDTHVSLHRSKMGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGQQEIEDVAKQLGIFSQQ*
Ga0131853_111558101	3300010162	Termite Gut	MDKDTVVSLHRSKVGRVDKMIKSGRFEDLYRQFKAVPSNARSEYFMMEAGRKVGPQEIEDVAKQLGVFGQQ*
Ga0126370_126668262	3300010358	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDVAKQLGIFGQ*
Ga0126372_115230873	3300010360	Tropical Forest Soil	MGGIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHSQPGR
Ga0126378_109624362	3300010361	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAQRLGIHGQPGW*
Ga0126381_1005229881	3300010376	Tropical Forest Soil	VDKDTHVSLHRSKMGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGLQEIEHLAKQLGIFGQQ*
Ga0124850_10159272	3300010863	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLAIHGQPGR*
Ga0150983_124692332	3300011120	Forest Soil	MDKDTHVSLHRSKMGRVDKMIRSGRCEDLYQELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR*
Ga0153941_10849101	3300012149	Attine Ant Fungus Gardens	MDKDTHVSLHRSRMGRIDKVLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKLLGIHGQPGR*
Ga0126369_108694131	3300012971	Tropical Forest Soil	MDKDTHVSLHRSRMGGIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGGNA*
Ga0164309_114216031	3300012984	Soil	MGRVDKMIRSGRFEDLYQELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR*
Ga0132258_105643684	3300015371	Arabidopsis Rhizosphere	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFEAAPSSTQSEYFMMEAGRKVGPQEIKDMAKLLGIHGQPGR*
Ga0182036_108601731	3300016270	Soil	MDKDAQVSLHRSKVGRGDKMLKSGRFEDLYREFAAVPSSTRSDYFMMDAGRRLDPQEIDDLAKQLGISR
Ga0182036_115238141	3300016270	Soil	MDKNTQVSLHRSKVGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGLQEIEDVAKQLGIFGQ
Ga0182041_101142133	3300016294	Soil	MDKDTQVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEDVAKRLGIHGQPGR
Ga0182033_107858401	3300016319	Soil	VSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEGVAKRLGIDGQPGR
Ga0182033_108987491	3300016319	Soil	KMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEDVAKQLGIFGQ
Ga0182033_113859851	3300016319	Soil	GRVDKMIKSGRFEDLYRQFSAVPSSARSEYFMTEAGRKVGPQEIEDVAKQLGVFGQ
Ga0182035_108371242	3300016341	Soil	MNKDTQVSLHRSKVGRGDKMLKSGRFEDLYSEFAAVPSSTRSDYFMMDAGRRLDPQEIDDLATQLGIRR
Ga0182034_108472813	3300016371	Soil	RADKMIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIFGQ
Ga0182040_102796051	3300016387	Soil	MDKDTQVSLHRSKMGRIDKMIKSGRFEDLYREFKAVLSSTRSEYFMMEAGRKVGPQEIEDVAKRLGIHGQPGR
Ga0182037_101500942	3300016404	Soil	LKPTGKLDIVGGCVRAPMDKDTDVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEGVAKRLGIDGQSGR
Ga0182039_106655411	3300016422	Soil	MDKDTQVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEGVAKRLGIDGQPGR
Ga0182039_108339153	3300016422	Soil	VDAAEPRNSASYETPMDKDTQVSLHRSKVGRGDKMLKSGRFEDLYTEFAAVPSSTRSDYFMMDAGRRLGPKEIDDLAKQLGIQR
Ga0182039_109129711	3300016422	Soil	RLEQRGAEPRNSASHETTMNKDTQVSLHRSKVGRGDKMLKSGRFEDLYREFAAVPSSTRSDYYMMDAGRRLDPQEIDDLATQLGIRR
Ga0187824_103743141	3300017927	Freshwater Sediment	MDKDTHVSLHRSRMGRIDKMLKGGRFEDLYREFKAVPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0187821_104984922	3300017936	Freshwater Sediment	MDKDTHVSLHRSRMGRVDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGRQEIEDMAKLLGIHGQDVGSSIVPHRRPK
Ga0187776_115175352	3300017966	Tropical Peatland	RMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPG
Ga0187783_100244337	3300017970	Tropical Peatland	MDKDTVVSLHRSKVGRVDKMIKSGRFEDLYRQFKAVPSSARSEYFMMDARRKVGPQEIEDVAKQLGVFGPQ
Ga0187783_105712773	3300017970	Tropical Peatland	MDKDTVVSLHRSKVGRVDKMIKSGRFEDLYRQFKAVPSTARSEYFMTEAGRKVGPQEIEDVAKQLGVFGQQ
Ga0187777_105049361	3300017974	Tropical Peatland	MDKDTHVSLHRSKMGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGLQEIEDVAKQLGIFGQQ
Ga0187823_103270181	3300017993	Freshwater Sediment	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGRQEIEDMAKLLGIHGQDVGS
Ga0187822_100864353	3300017994	Freshwater Sediment	MDKDTPVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIENMAKLLGIHGQPGR
Ga0187765_107733871	3300018060	Tropical Peatland	MDKDTVVSLHRSKVGRVDKMIKSGRFEDLYGQFKAVPSSTRSEYFMMEAGRKVGLQEIEDVAKQLGVFGQE
Ga0210407_100524823	3300020579	Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYQELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR
Ga0210407_100758922	3300020579	Soil	MDKDTHVSLHRSKMGRVDRMIKSGPFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0210407_101402332	3300020579	Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEGLAKQLGIITQR
Ga0210401_105492961	3300020583	Soil	TTMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEGLAKQLGIITQR
Ga0210404_101746313	3300021088	Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYQELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0210408_104572693	3300021178	Soil	MDKDTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAIAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0210387_106844122	3300021405	Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYQELKAVAPSTRSEYFMIEAGRKVGPQEIENLAKQ
Ga0210386_110153172	3300021406	Soil	MDKDTHVSLHRSKMGRVDRMIKSGPFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKQLGIISQR
Ga0210383_108607851	3300021407	Soil	MDKDTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0210394_100403634	3300021420	Soil	MGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEGLAKQLGIITQR
Ga0210384_115766893	3300021432	Soil	LVGSSAKEAPMDKGTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0210410_105143142	3300021479	Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEGLAKQLG
Ga0210410_113330341	3300021479	Soil	PQMDKDTQVSLHRSKMGRVDKMIRSGRFEDLYQELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR
Ga0210409_111804011	3300021559	Soil	HRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRPEYFMMEAGRKVGPQEIEDLAKQLGIIGQR
Ga0212123_102094614	3300022557	Iron-Sulfur Acid Spring	MDKGTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0212123_102267101	3300022557	Iron-Sulfur Acid Spring	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRPEYFMMEAGRKVGPQEIEDLAKQLGIIGQR
Ga0212123_109401251	3300022557	Iron-Sulfur Acid Spring	MDKDTHVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKIGPQEIEDLAKQLGIIGQR
Ga0224563_10299162	3300022731	Soil	MDKDTHVSLHRSKMGRVDRMIKSGPFEDLYREFKAVAPSTQFEYFMMEAGRKVGPQEIEDLAKLLDIVGQR
Ga0224572_10351054	3300024225	Rhizosphere	MDKDTHVSLHRSKMGRVDRMIKSGPFEDLYREFKAVAPSTQFEYFMMEAGRKVGPQEIEDLAK
Ga0224572_10824881	3300024225	Rhizosphere	MDKDTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKQLGIISQR
Ga0228598_10292634	3300024227	Rhizosphere	MDKDTHVSLHRSKMGRVDRMIKSGPFEDLYREFKAVAPSTQFEYFMMEAGRKVGPQE
Ga0207693_111453522	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKLLGIHGQPGR
Ga0207775_1043461	3300026817	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGI
Ga0207804_1070012	3300026849	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIDGQPGR
Ga0207859_10069863	3300026859	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIE
Ga0207724_10242222	3300026862	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAVPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIDGQPGR
Ga0207746_10085354	3300026865	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPPEIEDMAKRLGIHGQPGR
Ga0207854_10081492	3300026982	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMTEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0207784_10040864	3300026997	Tropical Forest Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIQGQPGR
Ga0207777_10922951	3300027330	Tropical Forest Soil	HVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPPEIEDMAKRLGIHGQPGR
Ga0209073_104255962	3300027765	Agricultural Soil	DKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAVPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0209380_107422741	3300027889	Soil	GTHVSLHRSKMGRVDRMIKSGRFEDLYREFKAVAPSTQSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR
Ga0209068_108895121	3300027894	Watersheds	DKMIRSGRFEDLYRELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR
Ga0209583_100159141	3300027910	Watersheds	MDKGTHVSLHRSKMGRVDRMIKSGRFEDLYREFKVVAPSTQSEYFMMEAGRKVGPQEIEDLAKQLGIISQR
Ga0308309_112949632	3300028906	Soil	RTGTTTMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR
Ga0318573_101082141	3300031564	Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPPEIED
Ga0318573_104601903	3300031564	Soil	LHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0318560_106175692	3300031682	Soil	MDKDTNVSLHRSKLGRPDKMIKSGRFEGLYREFKAVPSSTRSEYFMMEAGRKLGPQEIEDVAKQLGIFGQ
Ga0310686_1003885852	3300031708	Soil	MDKDTHVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR
Ga0307469_115687541	3300031720	Hardwood Forest Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR
Ga0306918_106787153	3300031744	Soil	HRSKLGRADKMIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIFG
Ga0318508_10681463	3300031780	Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSMQSEYFMMEAGSKVGPQEIEDMAKRLGIHGQPGR
Ga0318529_104474862	3300031792	Soil	GRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0318548_105024042	3300031793	Soil	IDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0318565_105034362	3300031799	Soil	IDKMVKSGRFEDLYREFNAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0310917_107417591	3300031833	Soil	MDKDTNVSLHRSKLGRADKMIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIF
Ga0306919_100288256	3300031879	Soil	MDKDTNVSLHRSKLGRADKMIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIFGQ
Ga0306919_100687717	3300031879	Soil	MDKDTNVSLHRSKLGRPDKMIKSGRFEGLYREFKAVPSSTRSEYFMMEAGRKLGPQEIEDVAKQLGIFG
Ga0306925_109767641	3300031890	Soil	LKPTGKLDIVGGCVRAPMDKDTDVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEGVAKRLGIDGQPGR
Ga0306925_120816161	3300031890	Soil	MDKNTQVSLHRSKVGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGLQEIEDVAKQLGIF
Ga0306923_108940252	3300031910	Soil	MDKDTQVSLHRSKMGRIDTMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEDVAKRLGIHGQPVR
Ga0306923_112634262	3300031910	Soil	VSLHRSKVGRGDKMLKSGRFEDLYSEFAAVPSSTRSAYFMMDAGRRLDPQEIDDLAKQLGISR
Ga0306921_106406021	3300031912	Soil	MDKDTDVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEGVAKRLGIDGQPGR
Ga0310916_101774965	3300031942	Soil	MDKDTQVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGLQEIEDVAKQLGIFGQQ
Ga0310916_113311771	3300031942	Soil	MDKNTQVSLHRSKVGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEDVAKQLGIFGQ
Ga0310916_114824041	3300031942	Soil	MDKDTQVSLHRSKVGRGDKMLKSGRFEDLYTEFAAVPSSTRSDYFMMDAGRRLDPQEIDDLATQLGIRR
Ga0310909_105892102	3300031947	Soil	MDKDTQVSLHRSKVGRGDKMLKSGRFEDLYTEFAAVPSSTRSDYFMMDAGRRLGPKEIDDLAKQLGIQR
Ga0310909_108970493	3300031947	Soil	KLGRADKMIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIFGQ
Ga0306926_100149891	3300031954	Soil	GRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEDVAKQLGIFGQ
Ga0306926_102838931	3300031954	Soil	NSASYETPMDKDTQVSLHRSKVGRGDKMLKSGRFEDLYTEFAAVPSSTRSDYFMMDAGRRLGPKEIDDLAKQLGIQR
Ga0306926_116967072	3300031954	Soil	VDKDTHVSLHRSKVGRPDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEADRKIGLQEIENVAKRLGIFGQQ
Ga0306926_117050961	3300031954	Soil	MDKDTQVSLHRSKMGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGPQEIEDVAKRL
Ga0307479_111251712	3300031962	Hardwood Forest Soil	MDKDTQVSLHRSKMGRIDKMIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKLLGIVGQR
Ga0306922_114729912	3300032001	Soil	MDKDTQVSLHRSKVGRGDKILKSGRFADLYMVFATVPSSIRSEYFMMDAGRRLDPQAIDELAKQLGISR
Ga0310911_101648741	3300032035	Soil	MIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIFGQ
Ga0318558_101569361	3300032044	Soil	MDKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQAGR
Ga0318533_102373632	3300032059	Soil	MDKDTQVSLHRSKMGRIDKMIKSGRFEDLYREFKAVLSSTRSEYFMMEAGRKVGPQEIEDVAKRLGIHGQPVR
Ga0318533_108718381	3300032059	Soil	RPLREAPMDKDTNVSLHRGKLGRIDKMIKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKVGSQEIEDVAKQLGIFGQ
Ga0318504_104354281	3300032063	Soil	VSLHRSKMGRIDKMIKSGRFEDLYREFKAVLSSTRSEYFMMEAGRKVGPQEIEDVAKRLGIHGQPGR
Ga0306924_106110801	3300032076	Soil	MDKDTQVSLHRSKVGRGDKMLKSGRFEDLYREFAAVPSSTRPEYFMMYAGRKLDPQEIDDLAKQLGIHR
Ga0307471_1006145382	3300032180	Hardwood Forest Soil	MDKDTQVSLHRSKMGRVDKMIRSGRFEDLYRELKAVAPSTRSEYFMIEAGRKVGPQEIEDLAKQLGIISQR
Ga0306920_1008121001	3300032261	Soil	MDKNTQVSLHRSKVGRIDKMLKSGRFEDLYREFKAVPSSTRSEYFMMEAGRKIGLQEIEDVAKQLGIFGQQ
Ga0306920_1012614631	3300032261	Soil	MDKNTHVTLHRSKMGRVDRMIKSGRFEDLYREFKAVVPSAQSEYFMMEGARKFGPQDIEDLAKQLGIIGQR
Ga0310914_104466563	3300033289	Soil	LGRADKMIKSGRFEELYREFKAVPSSTRSEYFMMEADRKVGPQEIEDVAKQLGIFGQ
Ga0318519_109049862	3300033290	Soil	MEKDTHVSLHRSRMGRIDKMLKSGRFEDLYREFKAAPSSTQSEYFMMEAGRKVGPQEIEDMAKRLGIHGQPGR
Ga0326723_0586064_17_175	3300034090	Peat Soil	MIRSGRFEDLYRELKAVAPSTRSEYFMMEAGRKVGPQEIEDLAKQLGIIGQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056856

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences