Metagenome / Metatranscriptome Family F056827

Basic Information
Family ID	F056827
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	58 residues
Representative Sequence	LERFILTVEGPNFQELDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCRL
Number of Associated Samples	115
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.10 %
% of genes near scaffold ends (potentially truncated)	32.12 %
% of genes from short scaffolds (< 2000 bps)	89.05 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Most Common Taxonomy
Group	Bacteria (99.270 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.657 % of family members)
Environment Ontology (ENVO)	Unclassified (29.927 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (31.387 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.91% Coil/Unstructured: 59.09%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
b.53.1.1: Ribosomal protein L25-like	d1feua_	1feu	0.63719
d.113.1.2: IPP isomerase-like	d1hzta1	1hzt	0.6207
b.168.1.1: HisI-like	d1zpsa1	1zps	0.61814
d.113.1.1: MutT-like	d1jkna1	1jkn	0.61492
d.113.1.1: MutT-like	d1vcda_	1vcd	0.61299

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00884	Sulfatase	9.49
PF11139	SfLAP	2.92
PF00230	MIP	1.46
PF01663	Phosphodiest	1.46
PF03706	LPG_synthase_TM	1.46
PF03458	Gly_transporter	1.46
PF13186	SPASM	0.73
PF06897	DUF1269	0.73
PF04020	Phage_holin_4_2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.46
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	1.46
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	1.46
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	0.73
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.27 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.27 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.27 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	94.89 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.97 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.66 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	5.84 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	45.99 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	5.84 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.38 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	45.99 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	5.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Couchioplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes	45.99 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	5.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	45.99 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	5.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.73 %
Unclassified	root	N/A	0.73 %

Name	Rank	Taxonomy	Distribution
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	45.99 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	5.84 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.38 %
Kribbella soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	2.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.19 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.73 %
Unclassified	root	N/A	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104104505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	534	Open in IMG/M
3300002568\|C688J35102_120667708	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300002568\|C688J35102_120835347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1748	Open in IMG/M
3300004081\|Ga0063454_101060851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300004081\|Ga0063454_101940085	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300004463\|Ga0063356_100262770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2103	Open in IMG/M
3300004479\|Ga0062595_100937305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300004798\|Ga0058859_10080434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300004801\|Ga0058860_10111153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	692	Open in IMG/M
3300005162\|Ga0066814_10100413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	541	Open in IMG/M
3300005168\|Ga0066809_10094268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	725	Open in IMG/M
3300005186\|Ga0066676_10183464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1336	Open in IMG/M
3300005330\|Ga0070690_100120743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1759	Open in IMG/M
3300005332\|Ga0066388_107107276	Not Available	563	Open in IMG/M
3300005343\|Ga0070687_100285246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1041	Open in IMG/M
3300005343\|Ga0070687_100320372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	990	Open in IMG/M
3300005365\|Ga0070688_100266955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300005437\|Ga0070710_10252290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1134	Open in IMG/M
3300005450\|Ga0066682_10385320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300005526\|Ga0073909_10002899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5072	Open in IMG/M
3300005549\|Ga0070704_100367733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1218	Open in IMG/M
3300005549\|Ga0070704_100490469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1064	Open in IMG/M
3300005587\|Ga0066654_10099467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1402	Open in IMG/M
3300005615\|Ga0070702_100042155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2564	Open in IMG/M
3300005618\|Ga0068864_100982390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300006046\|Ga0066652_100445463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1190	Open in IMG/M
3300006173\|Ga0070716_101238468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	601	Open in IMG/M
3300006175\|Ga0070712_101463247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300006581\|Ga0074048_12318839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	614	Open in IMG/M
3300006581\|Ga0074048_12702071	All Organisms → cellular organisms → Bacteria → Terrabacteria group	566	Open in IMG/M
3300006605\|Ga0074057_11441483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300007255\|Ga0099791_10242292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	854	Open in IMG/M
3300009176\|Ga0105242_10668181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300009551\|Ga0105238_11654535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	671	Open in IMG/M
3300009840\|Ga0126313_11800634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	512	Open in IMG/M
3300010036\|Ga0126305_10089888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1825	Open in IMG/M
3300010040\|Ga0126308_10040939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2645	Open in IMG/M
3300010087\|Ga0127492_1098251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	502	Open in IMG/M
3300010147\|Ga0126319_1165210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	837	Open in IMG/M
3300010154\|Ga0127503_10142274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	931	Open in IMG/M
3300010154\|Ga0127503_10223398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	773	Open in IMG/M
3300010333\|Ga0134080_10707602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	500	Open in IMG/M
3300012198\|Ga0137364_10034553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	3255	Open in IMG/M
3300012200\|Ga0137382_10159230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1535	Open in IMG/M
3300012200\|Ga0137382_10295613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1129	Open in IMG/M
3300012685\|Ga0137397_10041751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3281	Open in IMG/M
3300012685\|Ga0137397_10754073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	722	Open in IMG/M
3300012937\|Ga0162653_100020519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	887	Open in IMG/M
3300012938\|Ga0162651_100047793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	668	Open in IMG/M
3300012941\|Ga0162652_100049923	All Organisms → cellular organisms → Bacteria → Terrabacteria group	679	Open in IMG/M
3300012989\|Ga0164305_10578791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	898	Open in IMG/M
3300013308\|Ga0157375_11700847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300014745\|Ga0157377_10324139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300017792\|Ga0163161_10692135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300017997\|Ga0184610_1096832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	932	Open in IMG/M
3300018000\|Ga0184604_10304085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	563	Open in IMG/M
3300018027\|Ga0184605_10014467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3084	Open in IMG/M
3300018027\|Ga0184605_10026023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2383	Open in IMG/M
3300018051\|Ga0184620_10008299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2278	Open in IMG/M
3300018054\|Ga0184621_10137311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	878	Open in IMG/M
3300018061\|Ga0184619_10049258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1828	Open in IMG/M
3300018061\|Ga0184619_10072451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1523	Open in IMG/M
3300018061\|Ga0184619_10315712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	715	Open in IMG/M
3300018081\|Ga0184625_10182532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1099	Open in IMG/M
3300018433\|Ga0066667_10588193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300018482\|Ga0066669_11699712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300019249\|Ga0184648_1315197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	561	Open in IMG/M
3300019249\|Ga0184648_1316067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	539	Open in IMG/M
3300019254\|Ga0184641_1042501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	822	Open in IMG/M
3300019255\|Ga0184643_1380759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	958	Open in IMG/M
3300019259\|Ga0184646_1094662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1145	Open in IMG/M
3300019269\|Ga0184644_1079013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	738	Open in IMG/M
3300019269\|Ga0184644_1772700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	770	Open in IMG/M
3300019279\|Ga0184642_1207203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	918	Open in IMG/M
3300019883\|Ga0193725_1031107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300019885\|Ga0193747_1119766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300019999\|Ga0193718_1002561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3864	Open in IMG/M
3300020004\|Ga0193755_1201457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	567	Open in IMG/M
3300020016\|Ga0193696_1003411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4580	Open in IMG/M
3300020022\|Ga0193733_1045810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300020070\|Ga0206356_10216725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	937	Open in IMG/M
3300020080\|Ga0206350_10219378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	834	Open in IMG/M
3300020082\|Ga0206353_10880373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	533	Open in IMG/M
3300021078\|Ga0210381_10375783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	522	Open in IMG/M
3300021151\|Ga0179584_1501155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	845	Open in IMG/M
3300021344\|Ga0193719_10280323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300021363\|Ga0193699_10142251	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300021415\|Ga0193694_1050492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	574	Open in IMG/M
3300021510\|Ga0222621_1040334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	970	Open in IMG/M
3300021951\|Ga0222624_1316794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	846	Open in IMG/M
3300022756\|Ga0222622_10198548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1329	Open in IMG/M
3300025903\|Ga0207680_10662623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	747	Open in IMG/M
3300025914\|Ga0207671_10546042	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300025914\|Ga0207671_11256646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	578	Open in IMG/M
3300025926\|Ga0207659_10895128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	763	Open in IMG/M
3300026555\|Ga0179593_1156287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2879	Open in IMG/M
3300027401\|Ga0208637_1027438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	642	Open in IMG/M
3300027821\|Ga0209811_10004266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4614	Open in IMG/M
3300027821\|Ga0209811_10004852	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300028704\|Ga0307321_1049154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	797	Open in IMG/M
3300028768\|Ga0307280_10337691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	554	Open in IMG/M
3300028787\|Ga0307323_10290512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	588	Open in IMG/M
3300028802\|Ga0307503_10333938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300028803\|Ga0307281_10148427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	821	Open in IMG/M
3300028807\|Ga0307305_10343329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	677	Open in IMG/M
3300028814\|Ga0307302_10242320	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300028824\|Ga0307310_10334433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300028828\|Ga0307312_10217184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella soli	1231	Open in IMG/M
3300028828\|Ga0307312_10520755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300028878\|Ga0307278_10084334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1431	Open in IMG/M
3300028884\|Ga0307308_10239307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300030831\|Ga0308152_102220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	930	Open in IMG/M
3300030831\|Ga0308152_104716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	737	Open in IMG/M
3300030986\|Ga0308154_105527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	748	Open in IMG/M
3300030989\|Ga0308196_1016227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	829	Open in IMG/M
3300031097\|Ga0308188_1009058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	828	Open in IMG/M
3300031099\|Ga0308181_1052350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	778	Open in IMG/M
3300031100\|Ga0308180_1008495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	865	Open in IMG/M
3300031184\|Ga0307499_10128619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	723	Open in IMG/M
3300031226\|Ga0307497_10007454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2997	Open in IMG/M
3300031231\|Ga0170824_125564799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	874	Open in IMG/M
3300031421\|Ga0308194_10110971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	802	Open in IMG/M
3300031423\|Ga0308177_1009102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	736	Open in IMG/M
3300031423\|Ga0308177_1011263	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300031424\|Ga0308179_1017709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	758	Open in IMG/M
3300031446\|Ga0170820_15054287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	512	Open in IMG/M
3300031446\|Ga0170820_15600198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	700	Open in IMG/M
3300031469\|Ga0170819_17920032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300031474\|Ga0170818_115313370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	937	Open in IMG/M
3300031720\|Ga0307469_11939844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	571	Open in IMG/M
3300034447\|Ga0370544_11576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	660	Open in IMG/M
3300034643\|Ga0370545_040397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	874	Open in IMG/M
3300034643\|Ga0370545_052125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300034643\|Ga0370545_054969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	784	Open in IMG/M
3300034643\|Ga0370545_112943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	602	Open in IMG/M
3300034680\|Ga0370541_032934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	630	Open in IMG/M
3300034681\|Ga0370546_017385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	922	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.51%
Host-Associated	Host-Associated	9.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.26%
Aquatic	Environmental → Aquatic	18.25%
Plants	Host-Associated → Plants	8.03%
Human	Host-Associated → Human	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.07%
Freshwater	Environmental → Aquatic → Freshwater	9.49%
Sediment	Environmental → Aquatic → Sediment	8.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.84%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	2.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.19%
Digestive System	Host-Associated → Human → Digestive System	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.12%
Loam	Environmental → Terrestrial → Soil → Loam	10.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.19%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	2.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.19%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.19%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.66%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	7.30%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.92%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.19%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.19%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	2.19%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.19%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.46%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010087	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056827

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1041045052	3300000364	Soil	LERFILTVEGPTFQELDEIELQRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRI
C688J35102_1206677083	3300002568	Soil	LARFILTVEGPNFEEVDEIELPRSPVDGDPIETKLGTCLVIRTESLDEASQYSGRIVCRLPG*
C688J35102_1208353473	3300002568	Soil	LQRFILTLEGRDFEEVDEIELPRSPVEGDPIETNLGTCVVVRTEKVAEASQFSGRIVCRMP*
Ga0063454_1010608512	3300004081	Soil	LERFILTVEGPNFQEVDEIELPRSPVDGDPIETKLGTCLVVRTESLDEASQFSGRIVCRLP*
Ga0063454_1019400852	3300004081	Soil	VQRFIVTVEGRGFEELDEIELPRPPADGDPIETNLGTCLVVRTEAADAASAYSGRIVCRLP*
Ga0063356_1002627701	3300004463	Arabidopsis Thaliana Rhizosphere	LQRFILTVEGSSFEEIDEIELPRLPGDGDPIETKLGTCLVVRTEALDDASQYSGRIVCRLP*
Ga0062595_1009373051	3300004479	Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETDLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0058859_100804342	3300004798	Host-Associated	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLNDSSQYSGRIVCRLP*
Ga0058860_101111531	3300004801	Host-Associated	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0066814_101004131	3300005162	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVTDGSGHEGRIVCRMP*
Ga0066809_100942681	3300005168	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSGHDGRIVCRMP*
Ga0066676_101834642	3300005186	Soil	VPRFILTVEGPNLEDLDEIELPRLPLEGDPVSTRFGMCLVTSTESLNNGGEFAGRIVCRMP*
Ga0070690_1001207432	3300005330	Switchgrass Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0066388_1071072761	3300005332	Tropical Forest Soil	MKRFIVTVEGSNLTDIEEIELPALPSEGDPIETRFGTCVVVSTEVLSGPSVHQGKIVCRMP*
Ga0070687_1002852461	3300005343	Switchgrass Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRI
Ga0070687_1003203723	3300005343	Switchgrass Rhizosphere	FQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0070688_1002669551	3300005365	Switchgrass Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRIV
Ga0070710_102522901	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRIVC
Ga0066682_103853201	3300005450	Soil	LPRFILTVEGPNLEDLDEIELPRLPLEGDPVSTRFGMCLVTSTESLNNGGEFAGRIVCRMP*
Ga0073909_100028995	3300005526	Surface Soil	LKRFVVTVEGPNLEDLEEIELPRLPQEGDPIETRFGTCVVVRTEAVVDASGHEGRIVCRMP*
Ga0070704_1003677331	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0070704_1004904693	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDD
Ga0066654_100994672	3300005587	Soil	VQRFIVTVEGPGFQELDEIELPRPPADGDPIETNLGTCLVIRTEAADAASAYSGRILCRLP*
Ga0070702_1000421551	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLNDSSQYSGRIVCRLP*
Ga0068864_1009823902	3300005618	Switchgrass Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLHDSSQYSGRIVCRLP*
Ga0066652_1004454631	3300006046	Soil	AELPRFILTVEGPNLEDLDEIELPRLPLEGDPVSTRFGMCLVTSTESLNNGGEFAGRIVCRMP*
Ga0070716_1012384682	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIV
Ga0070712_1014632471	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LARFILTVEGSNFQELDEIELPRPPADGDPIETNLGTCLVLRTEPLDDSSQYSGRIVCRLP*
Ga0074048_123188391	3300006581	Soil	LQQFILTVEGPGFEDLEKIELPKAPVDGDAIETQLGTCVVIRTEPMADDSQYAGRIVCRMP*
Ga0074048_127020712	3300006581	Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDTSQYSGRIVCRLP*
Ga0074057_114414832	3300006605	Soil	LERFILTVEGPNFQEVDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0099791_102422922	3300007255	Vadose Zone Soil	LQQFILTVEGPNFEDLDEIELPRLPQEGDPIETRFGTCLVVRTESATESSGYDGRIVCRLP*
Ga0105242_106681813	3300009176	Miscanthus Rhizosphere	PNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRIVCRLP*
Ga0105238_116545351	3300009551	Corn Rhizosphere	LERFILTVEGPNFQELDEIELPKSPVEGDPIETDLGTCLVVRTEPLNDSSQYSGRIVCRLP*
Ga0126313_118006342	3300009840	Serpentine Soil	MQFILTVEGPNMEDIESIELPRLPLAGEPIETNFGTCIVVSTTQSAAGGQYDGTIVC
Ga0126305_100898882	3300010036	Serpentine Soil	MQFILTVEGPNLEDVESIELPQLPVAGEPIETNFGRCIVVSTAPAAAGSQYDGTIVCRMP
Ga0126308_100409392	3300010040	Serpentine Soil	MQFILTVEGPNLEDVESIELPQLPLAGEPIETNFGRCIVVSTAPAAAGSQYDGTIVCRMP
Ga0127492_10982512	3300010087	Grasslands Soil	LQQFILTVEGSNFEELDEIELPQLPQAGDPIETKLGTCLVVRTESAAEGSNYD
Ga0126319_11652101	3300010147	Soil	LARFILTVEGPNFQEVDEIELPRSPVDGDPIETKLGTCLVVRTESLDDASQYSGRIVCR
Ga0127503_101422741	3300010154	Soil	LKRFIVTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADVSGHEGRIVCRMP*
Ga0127503_102233982	3300010154	Soil	LKRFILTVEGPNLEDLEEIELPSLPLEGEPIETRFGTCVVVRTESVADGSGHDGKIICRMP*
Ga0134080_107076021	3300010333	Grasslands Soil	LQQFILTVEGSNFEELDEIELPRLPQEGDPIETKLGTCLVVRTESAAEGSNYDGRIVCRLP*
Ga0137364_100345532	3300012198	Vadose Zone Soil	LQQFILTVEGSNFEELDEIELPQLPQAGDPIETNLGTCIVVRTESAAEGSNYDGRIVCRLP*
Ga0137382_101592302	3300012200	Vadose Zone Soil	LKQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCVVVRTEAVADGSGHDGKIICRMP*
Ga0137382_102956131	3300012200	Vadose Zone Soil	LKRFILTVEGPSFQEVDVIELPRSPADDDPIETKLGTCLVVRTESLDDASQYSGRIVCRLP*
Ga0137397_100417511	3300012685	Vadose Zone Soil	LQQFILTVEGPNFEEVDEIELPRRPVDGDPIETKLGTCLVVRTESLDDASQYSGRIVCRLP*
Ga0137397_107540732	3300012685	Vadose Zone Soil	LKQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCVVVRTEPVTDGSGHDGKIICRMP*
Ga0162653_1000205191	3300012937	Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCRLP*
Ga0162651_1000477931	3300012938	Soil	LQQFILMVEGGSFEELDEIELPRLPQEGDPIETNLGTCLVVRTEPAAEGSNYDGRIVCRLP*
Ga0162652_1000499232	3300012941	Soil	LQQFILTVEGANFEELDEIELPSLPREGDPIETNLGTCLVVRTEPAAEGSNYDGRIVCRLP*
Ga0164305_105787911	3300012989	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTEAVVDASGHEGRIVCRMP*
Ga0157375_117008472	3300013308	Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVWTEPLNDSSQYSGRIVCRLP*
Ga0157377_103241393	3300014745	Miscanthus Rhizosphere	LERFILTVEGPTFQELDEIELPRSPVEGDPIETDLGTCLVVRAEPLDDSSQYSGRIVCRLP*
Ga0163161_106921352	3300017792	Switchgrass Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLNDSSQYSGRIVCRL
Ga0184610_10968322	3300017997	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRM
Ga0184604_103040851	3300018000	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSG
Ga0184605_100144671	3300018027	Groundwater Sediment	LKQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCVVVRTEAVADGSGHDGRIVCRM
Ga0184605_100260234	3300018027	Groundwater Sediment	LQQFILTVEGANFEELDEIELPRLPQEGDPIETKLGTCLVVRTESAAEGSNYDGRIVCRL
Ga0184620_100082994	3300018051	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPAAGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRM
Ga0184621_101373112	3300018054	Groundwater Sediment	LQQFILTVEGPGFEELDEIELPRLPQEGDPIETKLGTCLVVRTETAADGSNYDGRIVCRL
Ga0184619_100492581	3300018061	Groundwater Sediment	FEELDEIELPRLPQEGDPIETKLGTCLVVRTESAAEGSNYDGRIVCRLP
Ga0184619_100724511	3300018061	Groundwater Sediment	LKQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCIVVRTEPVADGSGHDGRIVCRM
Ga0184619_103157122	3300018061	Groundwater Sediment	LQQFILTVEGPNFEELDEIELPRLPQEGDPIETKLGTCLVVRTESAAEGSNYDGRIVCRL
Ga0184625_101825323	3300018081	Groundwater Sediment	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVIRTESLDDASQYSGRIVCRL
Ga0066667_105881931	3300018433	Grasslands Soil	LPRFILTVEGPNLEDLDEIELPRLPLEGDPVSTRFGMCLVTSTESLNNGGEFAGRIVCRM
Ga0066669_116997122	3300018482	Grasslands Soil	PRFILTVEGPNLEDLDEIELPRLPLEGDPVSTRFGMCLVTSTESLNNGGEFAGRIVCRMP
Ga0184648_13151971	3300019249	Groundwater Sediment	LKQFILTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADGS
Ga0184648_13160671	3300019249	Groundwater Sediment	LKQFILTVEGPNLEDLEEIELPGLPQEGDPIETRFGTCVVVRTESVADGS
Ga0184641_10425012	3300019254	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDD
Ga0184643_13807591	3300019255	Groundwater Sediment	LKQFILTVEVPNLEDLEEIELPSLPLEGDPIETRFGTCIVVRTEPVADGSGHDGRIVCRM
Ga0184646_10946623	3300019259	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPADGEPIETNLGTCLVVRTEPLDDSSQYSGRIVCRM
Ga0184644_10790131	3300019269	Groundwater Sediment	LQQFILTVEGANFEELDEIELPSLPREGDPIETNLGTCLVVRTEPAAEGSNYDGRIVCRL
Ga0184644_17727002	3300019269	Groundwater Sediment	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSGHEGRIVCRM
Ga0184642_12072032	3300019279	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTESLDDASQYSGRIVCRL
Ga0193725_10311073	3300019883	Soil	LKRFVVTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSGHEGRIVCRM
Ga0193747_11197662	3300019885	Soil	LARFILTVEGSSFQEIDEIELPRSPADGDPIETNLGTCVVVRTESLDDASQYSGRIVCRL
Ga0193718_10025611	3300019999	Soil	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDS
Ga0193755_12014572	3300020004	Soil	LARFILTVEGPNFQEVDEIELPRSPVDGDPIETKLGTCLVVRTESLDDASQYSGRIVCRL
Ga0193696_10034114	3300020016	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVVDGSGHEGRIVCRM
Ga0193733_10458103	3300020022	Soil	ILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRMP
Ga0206356_102167252	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVWTEPLNDSSQYSGRIVCRL
Ga0206350_102193782	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLHDSSQYSGRIVCRL
Ga0206353_108803732	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLNDS
Ga0210381_103757832	3300021078	Groundwater Sediment	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDS
Ga0179584_15011552	3300021151	Vadose Zone Soil	MQQFILTVEGPNLEDLEAIELPNLPLEGEPIETRFGTCVVVRTESMPAGAEYDGRIVCRM
Ga0193719_102803231	3300021344	Soil	LERFILTVEGPSFQEVDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCRL
Ga0193699_101422513	3300021363	Soil	LARFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDASQYSGRIVCRL
Ga0193694_10504922	3300021415	Soil	LARFILTVEGPNFQEIDEIELPRSPVDGDPIETKLGTCLVVRTESLDDASQYSGRIVCRL
Ga0222621_10403342	3300021510	Groundwater Sediment	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIV
Ga0222624_13167941	3300021951	Groundwater Sediment	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSTQYSGRIVCRL
Ga0222622_101985483	3300022756	Groundwater Sediment	LERFILTVEGPSFQEVDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCR
Ga0207680_106626231	3300025903	Switchgrass Rhizosphere	EGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQYSGRIVCRLP
Ga0207671_105460423	3300025914	Corn Rhizosphere	ILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLNDSSQYSGRIVCRLP
Ga0207671_112566461	3300025914	Corn Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSSQ
Ga0207659_108951282	3300025926	Miscanthus Rhizosphere	LERFILTVEGPNFQELDEIELPRSPVEGDPIETDLGTCLVVRTEPLDDSS
Ga0179593_11562875	3300026555	Vadose Zone Soil	LKRFILTVEGPSFQEVDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCRL
Ga0208637_10274382	3300027401	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVTDGSGHEGRIVCRM
Ga0209811_100042665	3300027821	Surface Soil	ERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRLP
Ga0209811_100048524	3300027821	Surface Soil	LKRFVVTVEGPNLEDLEEIELPRLPQEGDPIETRFGTCVVVRTEAVVDASGHEGRIVCRM
Ga0307321_10491542	3300028704	Soil	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSS
Ga0307280_103376912	3300028768	Soil	KQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCVVVRTEAVADGSGHDGRIVCRMP
Ga0307323_102905121	3300028787	Soil	LQQFILQVEGANFEELDEIELPRLPQEGDPIETKIGTCLVVRTEAAAEGSNYDGRIVCRL
Ga0307503_103339382	3300028802	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSGHDGRIVCRM
Ga0307281_101484271	3300028803	Soil	LKQFILTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSGHDGKIICRM
Ga0307305_103433292	3300028807	Soil	LQQFILQVEGANFEELDEIELPRLPQEGDPIETKIGTCLVVRTESAAEGSNYDGRIVCRL
Ga0307302_102423203	3300028814	Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETKLGTCLVIRTESLDDASQYSGRIVCRL
Ga0307310_103344331	3300028824	Soil	LQQFILQVEGANFEELDEIELPRLPREGDPIETKIGTCLVVRTEAAAEGSNYDGRIVCRL
Ga0307312_102171841	3300028828	Soil	MKQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCIVVRTEPVADGSGHDGRIVCRM
Ga0307312_105207552	3300028828	Soil	LKQFILTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADDSGHDGKIICRM
Ga0307278_100843343	3300028878	Soil	LKQFIVTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSGHDGRIVCRM
Ga0307308_102393072	3300028884	Soil	LQQFILTVEGANFEELDEIELPRLPQEGDPIETKIGTCLVVRTEAAAEGSNYDGRIVCRL
Ga0308152_1022201	3300030831	Soil	LARFILTVEGPNFHELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRL
Ga0308152_1047161	3300030831	Soil	LQQFILTVEGPNFEELDEIELPRLPKEGDPIETKLGTCLVVRTESAAEGSNYDG
Ga0308154_1055271	3300030986	Soil	LERFILTVEGPSFQEVDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVC
Ga0308196_10162271	3300030989	Soil	LERFILTVEGPSFQEVDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCRG
Ga0308188_10090581	3300031097	Soil	LERFILTVEGPSFQEVDEIELPRSPADGDPIETKLGTCLVVRTESLDDA
Ga0308181_10523502	3300031099	Soil	LQQFILTVEGPNFEELDEIELPRLPQEGDPIETKLGTCLVVRTETAADGSNYDGRI
Ga0308180_10084951	3300031100	Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETKLGTCLVVRTESLDDASQYSGRIVCRL
Ga0307499_101286192	3300031184	Soil	LKRFVVTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVTDGSGHEGRIVCRM
Ga0307497_100074541	3300031226	Soil	KRFVVTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVTDGSGHEGRIVCRMP
Ga0170824_1255647992	3300031231	Forest Soil	LKRFVVTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTEAVADGSRHDGRIVCRM
Ga0308194_101109711	3300031421	Soil	LQQFILTVEGANFEELDEIELPRLPQEGDPIETKIGTCLVVRTESAAEGSNYDGRIVCRL
Ga0308177_10091022	3300031423	Soil	LQQFILTVEGPNFEELDEIELPRLPQEGDPIETKLGTCLVVRTESAAEGSNYDGRIVC
Ga0308177_10112632	3300031423	Soil	LQQFILQVEGANFEELDEIELPRLPQEGDPIETNLGTCLVVRTEPAAEGSNYDGRIVCRL
Ga0308179_10177091	3300031424	Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGR
Ga0170820_150542872	3300031446	Forest Soil	LERFILTVEGSNFQELDEIELPRPPADGDPIETDLGTCLVLRTESLDDSSQYSGRIVCRL
Ga0170820_156001982	3300031446	Forest Soil	LARFILTVEGSNFQELDEIELPRPPADGDPIETDLGTCLVLRTEQLDDSSQYSGRIVCRL
Ga0170819_179200321	3300031469	Forest Soil	LQRFILTVEGPGFEELDEIELPRLPPEGDPIETKFGTCLIVRAEGATDGSNYDGRIVCRL
Ga0170818_1153133701	3300031474	Forest Soil	LARFILTVEGSNFQELDEIELPRPPADGDPIETNLGTCLVLRTEPLDDSSQYSGRIVCRL
Ga0307469_119398441	3300031720	Hardwood Forest Soil	LERFILTVEGPNFQELDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVWRL
Ga0370544_11576_37_222	3300034447	Soil	LQQFILTVEGPNFEELDEIELPRLPQEGDPIETKIGTCLVVRTESAAEGSNYDGRIVCRL
Ga0370545_040397_6_191	3300034643	Soil	LARFILTVEGSNFQELDEIELPRPPADGDPIETNVGTCLVLRTEPLDDSSQYSGRIVCRL
Ga0370545_052125_601_786	3300034643	Soil	LKQFILTVEGPNLEDLEEIELPSLPQEGDPIVTRFGTCVVVRTESVADGSGHDGKIICRM
Ga0370545_054969_630_782	3300034643	Soil	MKQFILTVEGPNLEDLEEIELPSLPQEGDPIETRFGTCVVVRTESVADGSG
Ga0370545_112943_2_184	3300034643	Soil	LKRFVVTVEGPNLEDIEEIELPSLPQEGDPIETRFGTCVVVRTESVSDGSGHDGRIVCRM
Ga0370541_032934_467_628	3300034680	Soil	LKQFILTVEGPNLEDLEEIELPSLPLEGDPIETRFGTCVVVRTEAVADGSGHDG
Ga0370546_017385_57_242	3300034681	Soil	LERFILTVEGPSFQEVDEIELPRSPADGDPIETNLGTCLVVRTEPLDDSSQYSGRIVCRM

Hidden Markov Model


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