NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F056595

Metagenome / Metatranscriptome Family F056595

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056595
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 58 residues
Representative Sequence SWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS
Number of Associated Samples 110
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.65 %
% of genes near scaffold ends (potentially truncated) 96.35 %
% of genes from short scaffolds (< 2000 bps) 96.35 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.080 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(28.467 % of family members)
Environment Ontology (ENVO) Unclassified
(31.387 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.745 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 11.63%    β-sheet: 2.33%    Coil/Unstructured: 86.05%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.24
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF00905Transpeptidase 21.17
PF13378MR_MLE_C 5.11
PF00912Transgly 4.38
PF13362Toprim_3 3.65
PF00561Abhydrolase_1 0.73
PF13545HTH_Crp_2 0.73
PF11149DUF2924 0.73
PF07045DUF1330 0.73
PF13437HlyD_3 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG0744Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidaseCell wall/membrane/envelope biogenesis [M] 4.38
COG4953Membrane carboxypeptidase/penicillin-binding protein PbpCCell wall/membrane/envelope biogenesis [M] 4.38
COG5009Membrane carboxypeptidase/penicillin-binding proteinCell wall/membrane/envelope biogenesis [M] 4.38
COG5470Uncharacterized conserved protein, DUF1330 familyFunction unknown [S] 0.73

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.08 %
UnclassifiedrootN/A2.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459003|FZ032L002HONOGAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales520Open in IMG/M
2170459014|G1P06HT02IYHQ0All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria511Open in IMG/M
2170459024|GZRSKLJ02GQGKAAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria525Open in IMG/M
2228664022|INPgaii200_c0820781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales590Open in IMG/M
3300000550|F24TB_10511769Not Available528Open in IMG/M
3300000955|JGI1027J12803_107217010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria542Open in IMG/M
3300002906|JGI25614J43888_10196402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria546Open in IMG/M
3300005176|Ga0066679_10437742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria856Open in IMG/M
3300005177|Ga0066690_10904286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales563Open in IMG/M
3300005179|Ga0066684_10186484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1335Open in IMG/M
3300005332|Ga0066388_100664932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1654Open in IMG/M
3300005332|Ga0066388_101653055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1130Open in IMG/M
3300005332|Ga0066388_104901948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria680Open in IMG/M
3300005332|Ga0066388_107445766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria549Open in IMG/M
3300005332|Ga0066388_108075523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria526Open in IMG/M
3300005332|Ga0066388_108699583All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria504Open in IMG/M
3300005355|Ga0070671_101864823All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales534Open in IMG/M
3300005363|Ga0008090_10199343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales710Open in IMG/M
3300005363|Ga0008090_10263186All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales849Open in IMG/M
3300005434|Ga0070709_11580421All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria534Open in IMG/M
3300005435|Ga0070714_101354434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales695Open in IMG/M
3300005467|Ga0070706_101250522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales681Open in IMG/M
3300005536|Ga0070697_100451792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1119Open in IMG/M
3300005552|Ga0066701_10733077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium592Open in IMG/M
3300005553|Ga0066695_10206653All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1233Open in IMG/M
3300005610|Ga0070763_10599330All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005713|Ga0066905_100655294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria896Open in IMG/M
3300005713|Ga0066905_100860853All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales790Open in IMG/M
3300005713|Ga0066905_101222659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria672Open in IMG/M
3300005764|Ga0066903_102980379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria917Open in IMG/M
3300005764|Ga0066903_103684649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria824Open in IMG/M
3300005764|Ga0066903_104266897All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales764Open in IMG/M
3300005764|Ga0066903_105092534Not Available696Open in IMG/M
3300006028|Ga0070717_10543883All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1051Open in IMG/M
3300006031|Ga0066651_10154393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1204Open in IMG/M
3300006578|Ga0074059_11759959All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300006791|Ga0066653_10183443All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1050Open in IMG/M
3300006794|Ga0066658_10226895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria995Open in IMG/M
3300006854|Ga0075425_102402845All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium585Open in IMG/M
3300006903|Ga0075426_11288395All Organisms → cellular organisms → Bacteria → Proteobacteria554Open in IMG/M
3300006904|Ga0075424_101218930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria801Open in IMG/M
3300007258|Ga0099793_10385215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria688Open in IMG/M
3300009012|Ga0066710_102900522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria673Open in IMG/M
3300009038|Ga0099829_10527978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae980Open in IMG/M
3300009088|Ga0099830_11437844All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales574Open in IMG/M
3300009094|Ga0111539_11989153All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium674Open in IMG/M
3300009156|Ga0111538_12886181All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales601Open in IMG/M
3300009156|Ga0111538_13160016All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium574Open in IMG/M
3300009168|Ga0105104_10644588All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300009792|Ga0126374_11505633All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium552Open in IMG/M
3300010043|Ga0126380_10857341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales750Open in IMG/M
3300010046|Ga0126384_10727833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria882Open in IMG/M
3300010047|Ga0126382_12263044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales524Open in IMG/M
3300010048|Ga0126373_12641950All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium560Open in IMG/M
3300010154|Ga0127503_10786683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1070Open in IMG/M
3300010336|Ga0134071_10519158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales616Open in IMG/M
3300010360|Ga0126372_12406114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales577Open in IMG/M
3300010361|Ga0126378_11291082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria825Open in IMG/M
3300010362|Ga0126377_13092305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium537Open in IMG/M
3300010366|Ga0126379_10980821Not Available949Open in IMG/M
3300010398|Ga0126383_11022630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria915Open in IMG/M
3300010398|Ga0126383_13058580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria546Open in IMG/M
3300010398|Ga0126383_13444448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria517Open in IMG/M
3300010863|Ga0124850_1010656All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2921Open in IMG/M
3300010868|Ga0124844_1184731All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales770Open in IMG/M
3300012200|Ga0137382_10461213All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales900Open in IMG/M
3300012200|Ga0137382_10634939All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales764Open in IMG/M
3300012202|Ga0137363_10103705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2166Open in IMG/M
3300012208|Ga0137376_11474673All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales571Open in IMG/M
3300012353|Ga0137367_10418612Not Available949Open in IMG/M
3300012957|Ga0164303_10027690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2283Open in IMG/M
3300012961|Ga0164302_10884024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria684Open in IMG/M
3300012971|Ga0126369_10241453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1771Open in IMG/M
3300012971|Ga0126369_12037266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales662Open in IMG/M
3300012971|Ga0126369_13105833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium544Open in IMG/M
3300012971|Ga0126369_13494808All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium515Open in IMG/M
3300016294|Ga0182041_11782506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales571Open in IMG/M
3300016341|Ga0182035_10460414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1080Open in IMG/M
3300016422|Ga0182039_10776500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria849Open in IMG/M
3300016422|Ga0182039_11409525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales633Open in IMG/M
3300017657|Ga0134074_1074274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1157Open in IMG/M
3300018482|Ga0066669_10428458All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1129Open in IMG/M
3300020580|Ga0210403_10795004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria752Open in IMG/M
3300020580|Ga0210403_11410351All Organisms → cellular organisms → Bacteria → Proteobacteria527Open in IMG/M
3300021560|Ga0126371_13129646All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales560Open in IMG/M
3300025915|Ga0207693_10130612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1975Open in IMG/M
3300025929|Ga0207664_11480461All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales600Open in IMG/M
3300026332|Ga0209803_1132953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria981Open in IMG/M
3300026490|Ga0257153_1118087All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales521Open in IMG/M
3300026550|Ga0209474_10114978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1792Open in IMG/M
3300027907|Ga0207428_10360655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1068Open in IMG/M
3300028047|Ga0209526_10185345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1446Open in IMG/M
3300028718|Ga0307307_10236945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria581Open in IMG/M
3300028784|Ga0307282_10044732All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1960Open in IMG/M
3300028819|Ga0307296_10474635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria684Open in IMG/M
3300028885|Ga0307304_10066901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1370Open in IMG/M
3300030902|Ga0308202_1034600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria868Open in IMG/M
3300031092|Ga0308204_10363556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria501Open in IMG/M
3300031545|Ga0318541_10593941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300031564|Ga0318573_10639083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales572Open in IMG/M
3300031572|Ga0318515_10252643All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria945Open in IMG/M
3300031573|Ga0310915_10544892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria823Open in IMG/M
3300031668|Ga0318542_10339712All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria771Open in IMG/M
3300031680|Ga0318574_10263872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales997Open in IMG/M
3300031681|Ga0318572_10488324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria734Open in IMG/M
3300031713|Ga0318496_10187760All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1135Open in IMG/M
3300031724|Ga0318500_10257164All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria848Open in IMG/M
3300031736|Ga0318501_10335649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria811Open in IMG/M
3300031764|Ga0318535_10453979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales571Open in IMG/M
3300031764|Ga0318535_10454051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales570Open in IMG/M
3300031771|Ga0318546_10923905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales614Open in IMG/M
3300031777|Ga0318543_10063832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1529Open in IMG/M
3300031778|Ga0318498_10226025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria846Open in IMG/M
3300031782|Ga0318552_10028632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium2536Open in IMG/M
3300031792|Ga0318529_10078815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1464Open in IMG/M
3300031796|Ga0318576_10252206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria832Open in IMG/M
3300031832|Ga0318499_10059796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1436Open in IMG/M
3300031833|Ga0310917_10768129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales651Open in IMG/M
3300031835|Ga0318517_10305143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales719Open in IMG/M
3300031846|Ga0318512_10332614All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria758Open in IMG/M
3300031880|Ga0318544_10039250All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1677Open in IMG/M
3300031880|Ga0318544_10392373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales539Open in IMG/M
3300031941|Ga0310912_11225942All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales570Open in IMG/M
3300031946|Ga0310910_11289591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria564Open in IMG/M
3300031954|Ga0306926_10123184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3197Open in IMG/M
3300031954|Ga0306926_10526553All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1450Open in IMG/M
3300032025|Ga0318507_10266716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales743Open in IMG/M
3300032042|Ga0318545_10330429All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales548Open in IMG/M
3300032051|Ga0318532_10167664All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria780Open in IMG/M
3300032051|Ga0318532_10301893All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium568Open in IMG/M
3300032054|Ga0318570_10388512All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales636Open in IMG/M
3300032059|Ga0318533_10158077All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1607Open in IMG/M
3300032059|Ga0318533_10454434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria937Open in IMG/M
3300032059|Ga0318533_10577056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria825Open in IMG/M
3300032064|Ga0318510_10199237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria808Open in IMG/M
3300032064|Ga0318510_10516133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales518Open in IMG/M
3300032076|Ga0306924_10365121All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1654Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil28.47%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil10.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.84%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.11%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.65%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.19%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.46%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.46%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil1.46%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.73%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.73%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.73%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.73%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.73%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.73%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459003Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459014Litter degradation PV2EngineeredOpen in IMG/M
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002906Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cmEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E4A_004216702170459003Grass SoilHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS
2PV_027109402170459014Switchgrass, Maize And Mischanthus LitterSEDAKLNVNVRGKGGASLHSWSFEIPVKCADKDRPLTPLTHDVPSDVAANVFTNVSTVEIAEPAEANYPGVRVQRCS
FD1_005901702170459024Grass SoilLNAIIRAKGGASLHSWSFGVSVKCGDKDQPLTPLTHDVPNDLAQNIFTNVSTVEIAEPAEPNFPGVRVQRCN
INPgaii200_082078122228664022SoilTHDVPSDVAANVFTNVSTVEIAEPTEANYPGVRVQRCS
F24TB_1051176913300000550SoilIVRAKGGASLHSWSLEISVKCADKDQPLTPLTHDVPNDLAQNIFTNVSTVGIGEPAEPNFPGVKIQKCN*
JGI1027J12803_10721701023300000955SoilLTPLTHDVPNDVAANVFSNVSSVEIAEPAEPNYRGVSVQRCS*
JGI25614J43888_1019640213300002906Grasslands SoilAKLNVIVRAKGGASLHSWSLDISVKCADKDRPLTPLTHDVPNDVAANVFTNVSAVEIAESSEPNYRGVSVQRCS*
Ga0066679_1043774213300005176SoilSLHSWSFGISVKCGDKDQPLTPLTHDVPNDLAQNIFANVSTVEIAEPAEPTFPGVKVQRCN*
Ga0066690_1090428613300005177SoilNVIVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0066684_1018648413300005179SoilGGASLHSWSFEIPVKCADKDRPLTPLTHDVPSDVATNVFSNVSTVEIAEPAEANYPGVRVQRCS*
Ga0066388_10066493223300005332Tropical Forest SoilKGGASLHSWSFGLSVKCADKDQPLTPLTHDVPNDLAQNIFANVSTVEIAEPAEPSFPGVRVQRCK*
Ga0066388_10165305513300005332Tropical Forest SoilCADKDQPLTPLTHDVPNDLAQNIFANVSTVEIAEPAEPSSPGVKVQRCN*
Ga0066388_10490194813300005332Tropical Forest SoilCADKDQPLTPLTHDVPNDLAQNIFANVSTVEIAEPAEPSFPGVKVQRCN*
Ga0066388_10744576613300005332Tropical Forest SoilVNVRAKGGASLHSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN*
Ga0066388_10807552323300005332Tropical Forest SoilKGGASLHSWSFGLSVKCADKDQPLTPLTHDVPNELAQNIFANVSTVEIAEPADPNFPGVRVQWCN*
Ga0066388_10869958313300005332Tropical Forest SoilGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0070671_10186482313300005355Switchgrass RhizosphereCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN*
Ga0008090_1019934323300005363Tropical Rainforest SoilNVNVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSIEVAEPAEPNFPGVKVQRCS*
Ga0008090_1026318613300005363Tropical Rainforest SoilNVNVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS*
Ga0070709_1158042113300005434Corn, Switchgrass And Miscanthus RhizosphereADKDQPLTPLTHDVPNELAQNIFTNVSTVEIAEPAEPNFPGVRVQRCN*
Ga0070714_10135443413300005435Agricultural SoilDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0070706_10125052213300005467Corn, Switchgrass And Miscanthus RhizosphereAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0070697_10045179223300005536Corn, Switchgrass And Miscanthus RhizosphereCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0066701_1073307713300005552SoilSVKCGDKDRPLTPLTHDVPNDVAANVFSNVSTVEIAEPGETNYRGVSVQRCN*
Ga0066695_1020665323300005553SoilSVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0070763_1059933023300005610SoilFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFSGVKVQQCS*
Ga0066905_10065529423300005713Tropical Forest SoilVIVRSKGGASLHSWSLAISVKCADKDRPLTPLTHDVPADVAANVFTNVGAVEIAEPTEPNYRGVSVQRCN*
Ga0066905_10086085323300005713Tropical Forest SoilLNVNVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDIAANVFTNVSTVEVAEPADPNFSGVKVQQCN*
Ga0066905_10122265923300005713Tropical Forest SoilHSWSFGISVKCADKDQPLTPLTHDVPTDVSANVFTNVSAVEVAEPAEPNFPGVKVQQCN*
Ga0066903_10298037913300005764Tropical Forest SoilISVKCADKDQPLTPLTHDVPTDIAANVFTNVSNVEVAEPADPNFSGVKVQKCN*
Ga0066903_10368464923300005764Tropical Forest SoilTHDVPNDLAQNIFANVSTVEIAEPAEPSFPGVKVQRCN*
Ga0066903_10426689723300005764Tropical Forest SoilKLNVNVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN*
Ga0066903_10509253423300005764Tropical Forest SoilRAKGGAALHTWTLGISVKCTDKDQPLTPLTHEVPTDVVANVFTNVGTVEIAEFSEPNYPGVKVQRCS*
Ga0070717_1054388313300006028Corn, Switchgrass And Miscanthus RhizosphereSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0066651_1015439313300006031SoilSLHSWSFEIPVKCADKDRPLTPLTHDVPSDVATNVFSNVSTVEIAEPAEANYPGVRVQRCS*
Ga0074059_1175995923300006578SoilDKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPADPNFPGVKVQRCS*
Ga0066653_1018344333300006791SoilLNAIVRAKGGASLHSWSFDISVKCADKDQPLTPLTHDVPNDLAQNIFKNVSTVEIAEPAEPNFPGVRVQRCN*
Ga0066658_1022689523300006794SoilLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0075425_10240284523300006854Populus RhizosphereAKGGASLHSWSFEIPVKCADKDRPLTPLTHDVPNDVAANVFTNVSTVEIAEPTEANYPGVRVQRCS*
Ga0075426_1128839523300006903Populus RhizosphereLHSWSFGISVKCADKDQSLTPLTHDVPNDLAQNIFTNVSTVEIAEPTEPSFPGVSVQRCN
Ga0075424_10121893023300006904Populus RhizosphereAKGGASLHSWSLEISVKCEDKDRPLTPLTHDVPNDVAQNVFTSVGTVEIAEPAEPNYRGGSVQRCS*
Ga0099793_1038521513300007258Vadose Zone SoilLGYFTPDEAKLNIIIRAKGGAVLHTWSVGVLVKCTNKDQPLTPLIHEVPNDLAANVFTNVNACEITEHTEPNYPGVKVQRCS*
Ga0066710_10290052213300009012Grasslands SoilPLTPLTHDVPSDVATNVFSNVSTVEIAEPAEANYPGVRVQRCS
Ga0099829_1052797823300009038Vadose Zone SoilAKGGASLHSWSFEVAVKCADKDRPLTPHTHDVPSDVAANVFSNVSTVEIAEPTEANYPGVRVQRCS*
Ga0099830_1143784423300009088Vadose Zone SoilEVAVKCADKDRPLTPHTHDVPSDVVANVFSNVSAVEIAEPTEANYPGVRVQRWS*
Ga0111539_1198915313300009094Populus RhizosphereLHSWGFEVSVKCADKDRPLTPLTHDVPADVAANVFTNVSAVEIAEPSEPNYRGVSVQRCN
Ga0111538_1288618123300009156Populus RhizosphereTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0111538_1316001623300009156Populus RhizosphereRPLTPLTHDVPSDVAANVFTNVSAVEIAEPSEPNYRGVSVQRCN*
Ga0105104_1064458823300009168Freshwater SedimentVIVRSKGGGAMYTWSLGIAVKCADKNQSLTPQTQDVPNDVAANVFTNAGGVEVTEYTEPNFPGVKVQRCG*
Ga0126374_1150563313300009792Tropical Forest SoilNVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPNDLAQNIFANVSTVEIAEPAEPSFPGVKVQRCN*
Ga0126380_1085734113300010043Tropical Forest SoilKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKIQKCN*
Ga0126384_1072783313300010046Tropical Forest SoilLTHDVPNELAQNIFTNVSTVEIAEPAEPNFPGVKVQRCN*
Ga0126382_1226304413300010047Tropical Forest SoilADKDQPLTPLTHDVPTDIAANVFTNVSNVEVAEPADPNFSGVKVQKCN*
Ga0126373_1264195013300010048Tropical Forest SoilIRTGAGAALYAWRFGIPVKCGDDKKPLAPLTHDVPNDLAQNIFANVSTVEIAEPAEPSFPGVRVQRCK*
Ga0127503_1078668323300010154SoilSFEISVKCADKDRPLTPLMHDVPNDVAANVFSNVSTVEIAELAEPSYRGVSVQRCS*
Ga0134071_1051915823300010336Grasslands SoilLTPLTHDVPTDVAANVFTNVSAVEVAEPAEPNFPGVKIRKCN*
Ga0126372_1240611423300010360Tropical Forest SoilGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS*
Ga0126378_1129108223300010361Tropical Forest SoilVPNDLAQNIFANVSSVEIAEPAEPSFPGVKVQRCN*
Ga0126377_1309230513300010362Tropical Forest SoilKGGASLHSWSLDISVKCEDKDRPLTPVTHDVPNDVAANVFANVGTVEIAEPAEPNYRGVSVQRCNS*
Ga0126379_1098082123300010366Tropical Forest SoilYLTTDEAKLNLIIRAKGGAALHAWTLGISVKCTDKDQPLTPLTHEVPTDVVANVFTNVGTVEIAEFSEPNYPGVKVQRCS*
Ga0126383_1102263023300010398Tropical Forest SoilTHDVPNDVAANVFSNVSTVEIAEPAEPNYRGVSVQRCD*
Ga0126383_1305858013300010398Tropical Forest SoilLTPLTHDVPTDVSANVFTNVSAVEVAEPAEPNFPGVKVQQCN*
Ga0126383_1344444813300010398Tropical Forest SoilWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSAVEVAEPAEPNFPGVKVQRCS*
Ga0124850_101065613300010863Tropical Forest SoilRHRSGAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDIAANVFTNVSAVEVAEPAEPNFPGVKVQRCS*
Ga0124844_118473123300010868Tropical Forest SoilVRAKGGASLHSWSFGVSVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS*
Ga0137382_1046121333300012200Vadose Zone SoilTPLTHDVPNDLAQNSFTNVSTVEIAEPAEPNFPGVRVQRCN*
Ga0137382_1063493923300012200Vadose Zone SoilSLGYLTGEEAKLNAIVRAKGGASLHSWSFGVSVKCADKDQPLTPLTHDVPNDLAQNIFTNVSTVEIAEPAEPNFPGVRVQRCN*
Ga0137363_1010370513300012202Vadose Zone SoilISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS*
Ga0137376_1147467323300012208Vadose Zone SoilDKDRPLTPHTHDVPSDVAANVFSNVSTVEIAEPTEANYPGVRVQRCS*
Ga0137367_1041861213300012353Vadose Zone SoilFGISVKCADKDQPLTPLTHDVPTDVSANVFTNVSAVEVAEPAEPNFPGVKIQKCN*
Ga0164303_1002769013300012957SoilTPEEAKLNAIVRAKGGASLHSWSFGLSVKCTDKDQPLTPLTHDVPNELAQNIFTNVSTVEIAEPAEPNFPGVKVQRCN*
Ga0164302_1088402413300012961SoilRAKGGASLHSWSFGLSVKCTDKDQPLTPLTHDVPNELAQNIFTNVSTVEIAEPAEPNFPGVKVQRCN*
Ga0126369_1024145313300012971Tropical Forest SoilVRAKGGASLHSWSFGVSVKCADKDQPLTPLTHDVPTDVAANVFTNVSGVEVAEPAEPNFPGVKVQRCS*
Ga0126369_1203726613300012971Tropical Forest SoilHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN*
Ga0126369_1310583323300012971Tropical Forest SoilVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDIAANVFTNVSAVEVAEPAEPNFPGVKVQRCS*
Ga0126369_1349480823300012971Tropical Forest SoilVRAKGGASLHSWSFGISVKCADKDQPLTPLTHDVPTDIAANVFTNVSTVEVAEPADPNFPGVKVQRCS*
Ga0182041_1178250613300016294SoilGGASLHSWAFGISVKCADKEQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0182035_1046041433300016341SoilYSTSEEAKLNAIVRAKGGASLHSWSFGISIKCADKDQPLTPLTHDVPNDLAKNIFANVSTVEIAEPAEPNFPGVKVQRCK
Ga0182039_1077650023300016422SoilSLHSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRC
Ga0182039_1140952523300016422SoilEEAKLNVNVRAKGGASLHSWGFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0134074_107427423300017657Grasslands SoilGASLHSWSFEIPVKCADKDRPLTPLTHDVPSDVATNVFSNVSTVEIAEPAEANYPGVRVQRCS
Ga0066669_1042845813300018482Grasslands SoilHSWGFEISVKCADKDRPLTPLTHDVPNDVAANVFSNVSTVEIAEPGETNYRGVSVQRCN
Ga0210403_1079500423300020580SoilKCADKDQPLTPLTHDVPNDLAQNIFTNVSTVEIAEPAEPNFPGVRVQRCN
Ga0210403_1141035113300020580SoilKMNAIIRAKGGASLHSWSFGVSVKCADKDQPLTPLTHDVPNDLAQNIFTNVSTVEIAEPAEPNFSGVRVQRCN
Ga0126371_1312964613300021560Tropical Forest SoilIPVKCADKDRPLTPLTHDVPSDVAANVFSNVSTVEIAEPAEANYPGVRVQRCS
Ga0207693_1013061223300025915Corn, Switchgrass And Miscanthus RhizosphereDVPNELAQNIFTNVSTVEIAEPAEPNFPGVKVQRCN
Ga0207664_1148046113300025929Agricultural SoilVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS
Ga0209803_113295323300026332SoilNVIVRAKGGASLHSWSFEIPVKCADKDRPLTPLTHDVPSDVATNVFSNVSTVEIAEPAEANYPGVRVQRCS
Ga0257153_111808723300026490SoilWSFEVPVKCADKDRPLTPLTHDVPSDVAANVFSNVSTVEIAEPTEANYPGVRVQRWS
Ga0209474_1011497813300026550SoilDAKLNVIVRAKGGASLHSWSFEIPVKCADKDRPLTPLTHDVPSDVATNVFSNVSTVEIAEPAEANYPGVRVQRCS
Ga0207428_1036065523300027907Populus RhizosphereKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS
Ga0209526_1018534523300028047Forest SoilSVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCS
Ga0307307_1023694513300028718SoilNAIIRAKGGASLHSWSFDISVKCAYKDQPLTPLTHDVPNDLAQNIFSNVSTIEIAEPAEPNFPGVRVQRCN
Ga0307282_1004473223300028784SoilLTSDEAKLNAIVRAKGGASLHSWSFGVAVKCTDKDQPLTPLTHDVPNELAQNIFTNVSTVEIAEPAEPNFPGVKVQRCN
Ga0307296_1047463513300028819SoilTSDEARLNVIVRSKGGASLYSWNLGISVKCTDNNLALTPLTHDVPNDVAVNVFANVGSVEIAEFNSEPNSQGVRVLPCE
Ga0307304_1006690123300028885SoilVKCTDKDQPLTPLTHDVPNELAQNIFTNVSTVEIAEPAEPNFPGVKVQRCN
Ga0308202_103460013300030902SoilISVKCAYKDQPLTPLTHDVPNDLAQNIFSNVSTIEIAEPAEPNFPGVRVQRCN
Ga0308204_1036355613300031092SoilLNAIIRAKGGASLHSWSFDISVKCAYKDQPLTPLTHDVPNDLAQNIFSNVSTIEIAEPAEPNFPGVRVQRCN
Ga0318541_1059394123300031545SoilIKCADKDQPLTPLTHDVPNDLAKNIFANVSTVEIAEPAEPNFPGVKVQRCK
Ga0318573_1063908323300031564SoilGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318515_1025264323300031572SoilDKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0310915_1054489213300031573SoilSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318542_1033971223300031668SoilPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318574_1026387213300031680SoilLNVNVRAKGGASLHSWGFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318572_1048832423300031681SoilSVKCEDKDRPLTPLTHDVPNDVAANVFANVGTVEVAEPAEPNYRGVSVQRCSS
Ga0318496_1018776013300031713SoilKGGASLHSWGFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318500_1025716423300031724SoilPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318501_1033564923300031736SoilTAEDAKLNVIVRAKGGASLHSWSLDISVKCEDKDRPLTPLTHDVPNDVAANVFANVGTVEVAEPAEPNYRGVSVQRCSS
Ga0318535_1045397913300031764SoilSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318535_1045405113300031764SoilISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318546_1092390523300031771SoilLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318543_1006383213300031777SoilGASLHSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318498_1022602523300031778SoilLNVNVRAKGGASLHSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318552_1002863223300031782SoilLHSWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS
Ga0318529_1007881523300031792SoilFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS
Ga0318576_1025220613300031796SoilDKDQPLTPLAHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318499_1005979613300031832SoilSVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0310917_1076812923300031833SoilSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318517_1030514323300031835SoilVSAKGGASLHSWSFGISVKCADKDQPLTPLAHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318512_1033261433300031846SoilPLTPLTHDVPNDLAKNIFANVSTVEIAEPAEPNFPGVKVQRCK
Ga0318544_1003925013300031880SoilLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318544_1039237313300031880SoilPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0310912_1122594213300031941SoilHSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0310910_1128959123300031946SoilFGISIKCADKDQPLTPLTHDVPNDLAKNIFANVSTVEIAEPAEPNFPGVKVQRCK
Ga0306926_1012318413300031954SoilVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0306926_1052655313300031954SoilSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318507_1026671623300032025SoilRAKGGGSLHSWGFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCN
Ga0318545_1033042923300032042SoilSWSFGIYVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318532_1016766413300032051SoilGISIKCADKDQPLTPLTHDVPNDLAKNIFANVSTVEIAEPAEPNFPGVKVQRCK
Ga0318532_1030189323300032051SoilPLTPLTHDVPNDVAANVFANVGTVEVAEPAEPNYRGVSVQRCSS
Ga0318570_1038851223300032054SoilDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS
Ga0318533_1015807723300032059SoilWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318533_1045443413300032059SoilGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS
Ga0318533_1057705613300032059SoilPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0318510_1019923713300032064SoilASLHSWSLGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS
Ga0318510_1051613323300032064SoilDKDQPLTPLTHDVPTDVAANVFTNVSTVEVAEPAEPNFPGVKVQRCN
Ga0306924_1036512123300032076SoilWSFGISVKCADKDQPLTPLTHDVPTDVAANVFTNVSSVEVAEPAEPNFPGVKVQRCS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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