Metagenome Family F056517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056517
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	51 residues
Representative Sequence	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Number of Associated Samples	98
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.76 %
% of genes near scaffold ends (potentially truncated)	35.77 %
% of genes from short scaffolds (< 2000 bps)	83.94 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.518 % of family members)
Environment Ontology (ENVO)	Unclassified (25.547 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.796 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.70% β-sheet: 0.00% Coil/Unstructured: 44.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00378	ECH_1	37.23
PF13505	OMP_b-brl	24.82
PF07287	AtuA	2.92
PF00270	DEAD	2.19
PF14376	Haem_bd	0.73
PF13458	Peripla_BP_6	0.73
PF00570	HRDC	0.73
PF00271	Helicase_C	0.73
PF00829	Ribosomal_L21p	0.73
PF11838	ERAP1_C	0.73
PF16124	RecQ_Zn_bind	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0261	Ribosomal protein L21	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	37.23 %
Unclassified	root	N/A	13.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	37.23 %
Unclassified	root	N/A	13.87 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	35.04 %
Unclassified	root	N/A	13.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	35.04 %
Unclassified	root	N/A	13.87 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	34.31 %
Unclassified	root	N/A	13.87 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.73 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	34.31 %
Unclassified	root	N/A	13.87 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.73 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	34.31 %
Unclassified	root	N/A	13.87 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.73 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8896165	All Organisms → cellular organisms → Bacteria	2103	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13550655	Not Available	534	Open in IMG/M
3300000956\|JGI10216J12902_110378443	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300000956\|JGI10216J12902_113871673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	787	Open in IMG/M
3300000956\|JGI10216J12902_119803319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	728	Open in IMG/M
3300001686\|C688J18823_10471067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	807	Open in IMG/M
3300001686\|C688J18823_10974346	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300002568\|C688J35102_117855848	Not Available	511	Open in IMG/M
3300003267\|soilL1_10001130	All Organisms → cellular organisms → Bacteria	6530	Open in IMG/M
3300003267\|soilL1_10087560	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300003319\|soilL2_10196994	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300003321\|soilH1_10238644	All Organisms → cellular organisms → Bacteria	2533	Open in IMG/M
3300003321\|soilH1_10246956	All Organisms → cellular organisms → Bacteria	2514	Open in IMG/M
3300003324\|soilH2_10169918	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300003996\|Ga0055467_10136574	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300003999\|Ga0055469_10131378	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300004052\|Ga0055490_10193516	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300004081\|Ga0063454_101266151	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	615	Open in IMG/M
3300004145\|Ga0055489_10011236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1978	Open in IMG/M
3300004156\|Ga0062589_101911642	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	599	Open in IMG/M
3300004157\|Ga0062590_100050758	All Organisms → cellular organisms → Bacteria	2300	Open in IMG/M
3300004463\|Ga0063356_100104041	All Organisms → cellular organisms → Bacteria	3091	Open in IMG/M
3300004463\|Ga0063356_100604288	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300004479\|Ga0062595_100028689	All Organisms → cellular organisms → Bacteria	2250	Open in IMG/M
3300004479\|Ga0062595_100112234	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300004479\|Ga0062595_100635132	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300004643\|Ga0062591_101259650	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005093\|Ga0062594_100858358	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300005332\|Ga0066388_100129988	All Organisms → cellular organisms → Bacteria	3061	Open in IMG/M
3300005332\|Ga0066388_100421233	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1979	Open in IMG/M
3300005332\|Ga0066388_103573844	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005332\|Ga0066388_106071302	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005344\|Ga0070661_101134684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	652	Open in IMG/M
3300005440\|Ga0070705_101597352	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	549	Open in IMG/M
3300005458\|Ga0070681_10123499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2522	Open in IMG/M
3300005468\|Ga0070707_100450984	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005536\|Ga0070697_101214636	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005564\|Ga0070664_100514670	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300005564\|Ga0070664_100544655	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300005564\|Ga0070664_101199851	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005598\|Ga0066706_11182764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300005617\|Ga0068859_100346515	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1580	Open in IMG/M
3300005618\|Ga0068864_100093286	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300005841\|Ga0068863_101697886	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300005884\|Ga0075291_1036025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	636	Open in IMG/M
3300005887\|Ga0075292_1074450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300006755\|Ga0079222_10007567	All Organisms → cellular organisms → Bacteria	3751	Open in IMG/M
3300006755\|Ga0079222_10210534	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300006755\|Ga0079222_10322403	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300006755\|Ga0079222_11621562	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300006755\|Ga0079222_11736511	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	600	Open in IMG/M
3300006796\|Ga0066665_10530860	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300006847\|Ga0075431_102236651	Not Available	501	Open in IMG/M
3300006854\|Ga0075425_101938800	Not Available	659	Open in IMG/M
3300006854\|Ga0075425_102902128	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300007076\|Ga0075435_101037551	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300009012\|Ga0066710_103395641	Not Available	605	Open in IMG/M
3300009081\|Ga0105098_10215861	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	892	Open in IMG/M
3300009100\|Ga0075418_11299149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	789	Open in IMG/M
3300009162\|Ga0075423_12044506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	621	Open in IMG/M
3300009162\|Ga0075423_12141324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	607	Open in IMG/M
3300009162\|Ga0075423_12215720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	597	Open in IMG/M
3300010373\|Ga0134128_13146704	Not Available	507	Open in IMG/M
3300010375\|Ga0105239_13656246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	500	Open in IMG/M
3300010401\|Ga0134121_11722366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	651	Open in IMG/M
3300012469\|Ga0150984_101617164	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	985	Open in IMG/M
3300012469\|Ga0150984_115549404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	674	Open in IMG/M
3300012684\|Ga0136614_10553048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	824	Open in IMG/M
3300012929\|Ga0137404_12114007	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012951\|Ga0164300_10369231	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	777	Open in IMG/M
3300012955\|Ga0164298_10129283	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300012955\|Ga0164298_10144255	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300012955\|Ga0164298_10508343	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012957\|Ga0164303_10611998	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012957\|Ga0164303_10663611	Not Available	697	Open in IMG/M
3300012958\|Ga0164299_10463912	Not Available	832	Open in IMG/M
3300012958\|Ga0164299_11345293	Not Available	549	Open in IMG/M
3300012958\|Ga0164299_11664938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300012961\|Ga0164302_10945806	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	666	Open in IMG/M
3300012984\|Ga0164309_10456906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	967	Open in IMG/M
3300012984\|Ga0164309_10653446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	828	Open in IMG/M
3300012988\|Ga0164306_11214838	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300012989\|Ga0164305_10311936	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300012989\|Ga0164305_11627136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	577	Open in IMG/M
3300013306\|Ga0163162_12835746	Not Available	558	Open in IMG/M
3300015264\|Ga0137403_11491289	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300015371\|Ga0132258_10423610	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300015371\|Ga0132258_10686692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2576	Open in IMG/M
3300015371\|Ga0132258_13953334	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300015373\|Ga0132257_103874098	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300015374\|Ga0132255_101796250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	931	Open in IMG/M
3300015374\|Ga0132255_102162891	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	848	Open in IMG/M
3300015374\|Ga0132255_104398787	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	597	Open in IMG/M
3300017787\|Ga0183260_10147519	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1678	Open in IMG/M
3300017789\|Ga0136617_10005589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	11248	Open in IMG/M
3300017789\|Ga0136617_10177897	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300018422\|Ga0190265_11651167	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	752	Open in IMG/M
3300018482\|Ga0066669_11139983	Not Available	704	Open in IMG/M
3300019377\|Ga0190264_10707076	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300021413\|Ga0193750_1087731	Not Available	560	Open in IMG/M
3300021445\|Ga0182009_10439142	Not Available	680	Open in IMG/M
3300025910\|Ga0207684_11329577	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300025933\|Ga0207706_10983120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300025945\|Ga0207679_10339795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1305	Open in IMG/M
3300025959\|Ga0210116_1018880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1276	Open in IMG/M
3300026041\|Ga0207639_10327405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1362	Open in IMG/M
3300026088\|Ga0207641_10084035	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300026088\|Ga0207641_12290070	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300026095\|Ga0207676_10632045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1031	Open in IMG/M
3300026116\|Ga0207674_12162301	Not Available	520	Open in IMG/M
3300027695\|Ga0209966_1087751	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300027722\|Ga0209819_10112854	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	949	Open in IMG/M
3300027765\|Ga0209073_10172642	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300028380\|Ga0268265_12691802	Not Available	503	Open in IMG/M
3300028587\|Ga0247828_10556706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	692	Open in IMG/M
3300028589\|Ga0247818_11323933	Not Available	517	Open in IMG/M
3300028812\|Ga0247825_10933011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	629	Open in IMG/M
3300030336\|Ga0247826_11201071	Not Available	608	Open in IMG/M
3300030336\|Ga0247826_11230231	Not Available	601	Open in IMG/M
3300031548\|Ga0307408_100238281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1494	Open in IMG/M
3300031716\|Ga0310813_10037025	All Organisms → cellular organisms → Bacteria	3500	Open in IMG/M
3300031716\|Ga0310813_10927230	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031716\|Ga0310813_11065872	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031731\|Ga0307405_10335792	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1160	Open in IMG/M
3300031858\|Ga0310892_11137284	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031901\|Ga0307406_10101812	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300031938\|Ga0308175_100006984	All Organisms → cellular organisms → Bacteria	8187	Open in IMG/M
3300031965\|Ga0326597_10137972	All Organisms → cellular organisms → Bacteria	2926	Open in IMG/M
3300032002\|Ga0307416_100663132	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1129	Open in IMG/M
3300032075\|Ga0310890_11418646	Not Available	571	Open in IMG/M
3300032126\|Ga0307415_101676833	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	612	Open in IMG/M
3300032144\|Ga0315910_11554416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	516	Open in IMG/M
3300032421\|Ga0310812_10027862	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300033550\|Ga0247829_10046620	All Organisms → cellular organisms → Bacteria	3020	Open in IMG/M
3300033550\|Ga0247829_10121080	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2001	Open in IMG/M
3300033550\|Ga0247829_11108497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	657	Open in IMG/M
3300034817\|Ga0373948_0045028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.61%
Host-Associated	Host-Associated	31.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.58%
Plants	Host-Associated → Plants	31.39%
Aquatic	Environmental → Aquatic	8.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.60%
Freshwater	Environmental → Aquatic → Freshwater	4.38%
Marine	Environmental → Aquatic → Marine	3.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.22%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.11%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.65%
Ice	Environmental → Aquatic → Freshwater → Ice	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.49%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.11%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.65%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	2.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.38%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	4.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.38%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.65%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.46%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.46%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01382860	2088090015	Soil	VTPLRIGLAIAGFAAAVLAVVLDQPRVVWGAIALLTGSLIVRLLQRRNGGV
ICChiseqgaiiFebDRAFT_135506552	3300000363	Soil	VSLTGLRIGLALGGFVVAVLAIALEDHRVGWAAIALLIGSLIVRLIQRRRPM*
JGI10216J12902_1103784431	3300000956	Soil	VTLLRLGLAIAGFAAAVLAVLLDQPRVVWGAIALLTGSLIVRLLQRRNGGV*
JGI10216J12902_1138716732	3300000956	Soil	MTRSALRIGLALAGFAVAVLATALEDHRLGWAAIALLLGSLIVRLLQRR*
JGI10216J12902_1198033191	3300000956	Soil	VTALRLGLAIAGLLLAGVTVLLDSPRLGWGAIALLLGSLIVRLLQRDGAT*
C688J18823_104710672	3300001686	Soil	GLAIAGFAAAVLAVLLDQPRVVWGAIALLTASLILRLLQRRNGGV*
C688J18823_109743461	3300001686	Soil	MTPLRLGLAIAGFAAAVLAVLLDQPRVGWGAIALLTGSLIVRLLQRRD
C688J35102_1178558482	3300002568	Soil	MTPLRLGLAVAGFAAAVLAVLLDQPRVVWGAIALLTASLIVRLLQRRNGGV*
soilL1_100011308	3300003267	Sugarcane Root And Bulk Soil	MSRLRIGLGLAGLAVAVVAVATDSPRITWAGIALLTGSLIVRLLQRRDGDV*
soilL1_100875602	3300003267	Sugarcane Root And Bulk Soil	VSLTGLRIGLALGGFVLALLAVALEDHRVGWGAIALLLGSLIVRLIQRRRSM*
soilL2_101969942	3300003319	Sugarcane Root And Bulk Soil	MSRLRIGLGLAGLAVAVVAVATDSPRITWAGIALLTGSIIVRLLQRRDGDV*
soilH1_102386443	3300003321	Sugarcane Root And Bulk Soil	VTGSILRVGLALAGFVAAVLAIALEDRRVGWLAIALLAGSLIVRLMQRRSTGV*
soilH1_102469563	3300003321	Sugarcane Root And Bulk Soil	MMSRLRIGLGLAGLAVAVVAVATDSPRITWAGIALLTGSLIVRLLQRRDGDV*
soilH2_101699183	3300003324	Sugarcane Root And Bulk Soil	RRHRALPRAVTGSILRVGLALAGFAAAVLAIVLEDRRVGWLAIALLAGSLIVRLMQRRSTGV*
Ga0055467_101365741	3300003996	Natural And Restored Wetlands	VTPLRIGLAIAGFAAAVLAVVLDQPRVVWGAIALLTGSLIVRLLQRRN
Ga0055469_101313781	3300003999	Natural And Restored Wetlands	VTPLRIGLAIAGFAAAVLAVVLDQPRVVWGAIALLTGSLIVRLLQRRNGGV*
Ga0055490_101935162	3300004052	Natural And Restored Wetlands	VTRLRIALALAGFAAAVMAVVLDQARIGWGAIALLTGSLIVRLLQRRKDV*
Ga0063454_1012661512	3300004081	Soil	MTPLRLGLAIAGFAAAVLAVLLDQPRVVWGAIALLTASLIVRLLQRRNGGV*
Ga0055489_100112361	3300004145	Natural And Restored Wetlands	LRIALALAGFAAAVMAVVLDQARIGWGAIALLTGSLIVRLLQRRKDV*
Ga0062589_1019116422	3300004156	Soil	EVTPLRIGLAIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0062590_1000507581	3300004157	Soil	VSWTALRIGLALAGFAVAVLSVALENHWLGWAAMALLLGSL
Ga0063356_1001040412	3300004463	Arabidopsis Thaliana Rhizosphere	MMTRLRVGLGLAGLAVAVLAVATDNPRITWAGIALLTGSLIVRLLQRRGGDL*
Ga0063356_1006042881	3300004463	Arabidopsis Thaliana Rhizosphere	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV*
Ga0062595_1000286893	3300004479	Soil	VSWTALRIGLALAGFAVAVLSVALENHWLGWAAMALLLGSLIVRLFQRRNRPM*
Ga0062595_1001122342	3300004479	Soil	VTPLRIGLAIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0062595_1006351322	3300004479	Soil	VSLTALRIGLALAGFVAAVVAIALEDHRVGWAAIAFLAGSLIVRLIQRRRPM*
Ga0062591_1012596502	3300004643	Soil	VTWTALRIGLALAGFAVAVLAIALEDHRLGWAAIALLLGSLMVRILQRRHRSM*
Ga0062594_1008583582	3300005093	Soil	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV*
Ga0066388_1001299882	3300005332	Tropical Forest Soil	VTLDALRVGLALAGFAVAVVAIAFEDHRVGWAAIALLIASLIVRLIQRRRPM*
Ga0066388_1004212331	3300005332	Tropical Forest Soil	GLSRGDRPVPPEVTPLRIGLAIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0066388_1035738441	3300005332	Tropical Forest Soil	VSLTALRIGLALAGFAVAVVAIALEDHRVGWAAIALLIGSLIVRLIQRRRPL*
Ga0066388_1060713022	3300005332	Tropical Forest Soil	VTRLRIGLAIAGFVAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV
Ga0070661_1011346842	3300005344	Corn Rhizosphere	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRVIQRRNGGV*
Ga0070705_1015973522	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTWAALRIGLALAGFAVAVLAIALEDHRLGWAAIALLLGSLIVRLLDRR*
Ga0070681_101234994	3300005458	Corn Rhizosphere	GLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV*
Ga0070707_1004509843	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTIPSLTALRMGLALAGFAAALLAVALEDRRLSWAAIALLAASLLVRLIQRRRNAP*
Ga0070697_1012146361	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTMPSLTALRMGLALAGFAAALLAVALEDRRLSWAAIALLAASLLVRLIQRRRNAP*
Ga0070664_1005146702	3300005564	Corn Rhizosphere	VTLLRIGLAIAGFAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRWGGV*
Ga0070664_1005446552	3300005564	Corn Rhizosphere	VSWTALRIGLALAGFAVAVVSVALENHWLGWAAMVLLLGSLIVRLLQRRNRSM*
Ga0070664_1011998511	3300005564	Corn Rhizosphere	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIV
Ga0066706_111827642	3300005598	Soil	IPSLTALRIGLALAGFAAALLAVALEDRRLSWAAIALLAASLLVRLIQRRRNAP*
Ga0068859_1003465151	3300005617	Switchgrass Rhizosphere	PLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV*
Ga0068864_1000932864	3300005618	Switchgrass Rhizosphere	VSWTALRIGLALAGFAVAVLSVALENHWLGWAAMVLLLGSLIVRLLQRRNRSM*
Ga0068863_1016978861	3300005841	Switchgrass Rhizosphere	VTPLRIGLAIAGFAAAVVAVMLDQPRMVWGAIALLTGSLIVRLLQRRGGV*
Ga0075291_10360252	3300005884	Rice Paddy Soil	MTRLRLGLGLAGLVVAAVAVATDSPRITWAGVALLTGSLIVRLLQRRDRDL*
Ga0075292_10744501	3300005887	Rice Paddy Soil	VTGSALRVGLALAGFVAAVLAIALEDRRLGWLAIALL
Ga0079222_100075675	3300006755	Agricultural Soil	VSLTALRIGLALAGFVAAVAAIALEDHRVGWAAIALLIGSLIVRLLQGRRPM*
Ga0079222_102105341	3300006755	Agricultural Soil	VSLTALRIGLALAGFIAAVVAIALEDHRVGWAAIAFLAGSLIV
Ga0079222_103224032	3300006755	Agricultural Soil	MSGSALRLGLALAGFIAAVLAIALEDVRVGWLAIALLAASLLVRLVQRRNTRV*
Ga0079222_116215621	3300006755	Agricultural Soil	MSLTAIRIGLALAGFALAVLAIALEDRRIGWGAIALLIGSLIVRLVQRRRPM*
Ga0079222_117365111	3300006755	Agricultural Soil	MSGSALRIGLALAGFVAAVLAIALEDERVGWLAIALLAGSLVVRLVRRRNPRV*
Ga0066665_105308602	3300006796	Soil	MTMPSLTALRIGLALAGFAAALLAVALEDRRLSWGAIALLAASLLVRLIQRRRNAP*
Ga0075431_1022366511	3300006847	Populus Rhizosphere	IGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRGGGV*
Ga0075425_1019388002	3300006854	Populus Rhizosphere	MTWAALRIGLALAGFAVAVLAIALEDHRLGWAAIALLLGPLIVRLLDRR*
Ga0075425_1029021281	3300006854	Populus Rhizosphere	VTWTALRLGLALAGFAVAVLAIALENHRLGWAAIALLIGSLIVRLLHRRPL*
Ga0075435_1010375512	3300007076	Populus Rhizosphere	VTWTALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRPM*
Ga0066710_1033956411	3300009012	Grasslands Soil	MTIPSLPALRMGLALAGFAAALLAVALEDRRLSWAAIALLAASLLVRLIQRRRNAP
Ga0105098_102158612	3300009081	Freshwater Sediment	MTAVRLGLAIAGFVAAVLTVVLDSPRLGWGAIALLLGSLIVRLIQRNGGA*
Ga0075418_112991492	3300009100	Populus Rhizosphere	GLAIAGFAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRKGGV*
Ga0075423_120445062	3300009162	Populus Rhizosphere	VTWTALRLGLALAGFAEAVLAIALENHRLGWAAIALLIGSLIVRLLQRRPL*
Ga0075423_121413241	3300009162	Populus Rhizosphere	VTWTALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRSM*
Ga0075423_122157202	3300009162	Populus Rhizosphere	VTLLRIGLAIAGFAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRKGGV*
Ga0134128_131467042	3300010373	Terrestrial Soil	VTWTALRLGLALAGFAVAVLAIALENHRLGWAAIALLIGSLIVRLLQRRPL*
Ga0105239_136562461	3300010375	Corn Rhizosphere	GDRPVPPEVTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV*
Ga0134121_117223662	3300010401	Terrestrial Soil	AIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0150984_1016171642	3300012469	Avena Fatua Rhizosphere	MTPLRLGLAIAGFAAAVLAVLLDQPRVVWGAIALLTASLIVRLLQPRNGGV*
Ga0150984_1155494042	3300012469	Avena Fatua Rhizosphere	VTPLRIGLALTGFAAALLAVILDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0136614_105530482	3300012684	Polar Desert Sand	VTALRHGLALAGFAVAAAGVALESTRLGWGAIALLAASLIVRLLGRHRDPPAP*
Ga0137404_121140072	3300012929	Vadose Zone Soil	MTIPSLTALRIGLALAGFAAALLAVAFEDRRISWAAIALLAASLLVRL
Ga0164300_103692312	3300012951	Soil	FAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0164298_101292832	3300012955	Soil	VSWTALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRPM*
Ga0164298_101442552	3300012955	Soil	VTLLRIGLAIAGFAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRRRGV*
Ga0164298_105083432	3300012955	Soil	VSWTALRIGLALAGFAVAVLSVALENHQLGWAAMVLLLGSLIVRLLQRRNRSM*
Ga0164303_106119982	3300012957	Soil	VTLTALRLGLALAGFAVAVLAIALENHRLGWAAIALLIGSLIVRLLQRRPL*
Ga0164303_106636112	3300012957	Soil	VSWTALRIGLALAGFAVAVLSVALENHRLGWAAIALLLCSLIVRLLQRRNRPM*
Ga0164299_104639122	3300012958	Soil	VTWTALRIGLALAGFAVAVLSVALENHRLGWAAITLLLSSLIVRLLERRNRPM*
Ga0164299_113452931	3300012958	Soil	FPRGHHPVPRTVSWTALRIGLALAGFAVAVLSVALENHQLGWAAMVLLLGSLIVRLLQRRNRSM*
Ga0164299_116649381	3300012958	Soil	LRIGLAIAGFAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0164302_109458062	3300012961	Soil	ALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRPM*
Ga0164309_104569061	3300012984	Soil	HGPRPVPRSVSWPALRIGLALAGFAVAVLSVALENHRLGWAAIALLLCSLIVRLLQRRNRPM*
Ga0164309_106534462	3300012984	Soil	VSWSALRIGLALAGVAVALLAIALEDHRVGWGAIALLLGSLILRLLQRRDPPV*
Ga0164306_112148382	3300012988	Soil	VSWSALRIGLALAGFAVALLAIALEDHRVGWGAIALLLGSLILRLLQPRDPPV*
Ga0164305_103119361	3300012989	Soil	WTALRIGLALAGFAVAVLSVALENHQLGWAAMVLLLGSLIVRLLQRRNRSM*
Ga0164305_116271362	3300012989	Soil	VTLTALRLGLALAGFAMAVLAIALENHRLGWAAIALLIGSLIVRLLQRRPL*
Ga0163162_128357462	3300013306	Switchgrass Rhizosphere	IAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV*
Ga0137403_114912891	3300015264	Vadose Zone Soil	MTIPSLTALRIGLALAGFAAALLAVAFEDRRFSWAAIALLAASLLVRL
Ga0132258_104236105	3300015371	Arabidopsis Rhizosphere	VTALRLGLAIAGLLLAGVTVLLDSPRLGWGAIALLVGSLIVRLLQRDGAT*
Ga0132258_106866922	3300015371	Arabidopsis Rhizosphere	VSWSALRIGLALAGFAVALLAIALEDHRVGWGAIALLLGSLILRLLQRRDPPV*
Ga0132258_139533342	3300015371	Arabidopsis Rhizosphere	MSLTALRVGLALAGFALAVLAIALEDHRIGWSAIALLIGSLIVRLVQRRRPM*
Ga0132257_1038740982	3300015373	Arabidopsis Rhizosphere	VSWTALRIGLALAGFAVAVLSVALEDHRLGWAAIALLLASLIVRLLQRRNRPM*
Ga0132255_1017962501	3300015374	Arabidopsis Rhizosphere	LALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRPM*
Ga0132255_1021628912	3300015374	Arabidopsis Rhizosphere	LAIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV*
Ga0132255_1043987872	3300015374	Arabidopsis Rhizosphere	LTAIRIGLALAGFAVAVLAIALEDRRIGWGAIALLIGSLIVRLVQRRGPM*
Ga0183260_101475192	3300017787	Polar Desert Sand	MSWLRLGLALAGFIVALLALTSGDQRLVWGSIALLTGSLIVRLLQRRGV
Ga0136617_100055892	3300017789	Polar Desert Sand	MSWLRLGLALAGFIVALLALTSGDQRLVWGSIALLTGSLIVRLLQRPGV
Ga0136617_101778972	3300017789	Polar Desert Sand	MRWLRLGLALAGFIVALLALASGNQRLVWGSIALLTGSLIVRLLQRRGV
Ga0190265_116511671	3300018422	Soil	VTALRLGLALAGFAAAAVAVAFDSTRIGWGAIALLAGSLIARLVSVQR
Ga0066669_111399832	3300018482	Grasslands Soil	MTIPSLTALRIGLALAGFAAALLAVALEDRRLSWGAIALLAASLLVRLIQRRRNAP
Ga0190264_107070762	3300019377	Soil	MARLRLGLALAGFVAALVALALESQRIGWAAIALLTASVIIRVIQRRNPPV
Ga0193750_10877312	3300021413	Soil	TAVRIGLALSGFAAALLAVAFEDRRFSWAAIGLLAGSLLIRLIQRRKNAP
Ga0182009_104391422	3300021445	Soil	RAPDPGLPRGARAVSPAVSLTALRIGLALAGFVAAVVAIALEDHRVGWAAIAFLAGSLIVRLIQRRRPM
Ga0207684_113295772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTWAALRIGLALAGFAVAVLAIALEDHRLGWAAIALLLGSLIVRLLDRR
Ga0207706_109831202	3300025933	Corn Rhizosphere	VTALRLGLAIAGFAAAVLAVLLDRPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0207679_103397953	3300025945	Corn Rhizosphere	VSWTALRIGLALAGFAVAVVSVALENHWLGWAAMVLLLGSLIVRLLQRRNRSM
Ga0210116_10188803	3300025959	Natural And Restored Wetlands	VTRLRIALALAGFAAAVMAVVLDQARIGWGAIALLTGSLIVRLLQRRKDV
Ga0207639_103274051	3300026041	Corn Rhizosphere	PPEVTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0207641_100840354	3300026088	Switchgrass Rhizosphere	VSWTALRIGLALAGFAVAVLSVALENHWLGWAAMVLLLGSLIVRLLQRRNRSM
Ga0207641_122900701	3300026088	Switchgrass Rhizosphere	VTWTALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIV
Ga0207676_106320452	3300026095	Switchgrass Rhizosphere	LALAGFAVAVLSVALENHWLGWAAMVLLLGSLIVRLLQRRNRPM
Ga0207674_121623012	3300026116	Corn Rhizosphere	VSWTALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRPM
Ga0209966_10877511	3300027695	Arabidopsis Thaliana Rhizosphere	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0209819_101128542	3300027722	Freshwater Sediment	MTAVRLGLAIAGFVAAVLTVVLDSPRLGWGAIALLLGSLIVRLIQRNGGA
Ga0209073_101726422	3300027765	Agricultural Soil	RAVSQAVSLTALRIGLALAGFVAAVAAIALEDHRVGWAAIALLIGSLIVRLLQGRRPM
Ga0268265_126918022	3300028380	Switchgrass Rhizosphere	PGPADTGLSRGDRPVPPEVTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV
Ga0247828_105567062	3300028587	Soil	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRVLQRRNGGV
Ga0247818_113239332	3300028589	Soil	VTLLRIGLAIAGFAAAVLAAILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0247825_109330112	3300028812	Soil	VTLLRIGLAIAGFAAAVVAVLLDQPRVVWGAIALLTGSLIVRLLQRRGGV
Ga0247826_112010711	3300030336	Soil	DRPVPPEVTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV
Ga0247826_112302312	3300030336	Soil	VTWTALRVGLALAGFAVAVLAIALENHRLGWAAIALLVGSLMVRILQRRHRSM
Ga0307408_1002382812	3300031548	Rhizosphere	MMAQSRLTLLRVGLALAGFTLALLAVALEDRRLGWGAIALLIGSLIVRLLQRGAARR
Ga0310813_100370255	3300031716	Soil	VTWTALRIGLALAGFAVAVVSVALESHWLGWAAIALLLGSLIVRLLQRRNRPM
Ga0310813_109272301	3300031716	Soil	MNRLRLGLALAGIALAVVAVALDQGRLGWAAIALLAGAVIVRLLQRRGSDTGPTD
Ga0310813_110658722	3300031716	Soil	VTPLRIGLAIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV
Ga0307405_103357922	3300031731	Rhizosphere	VTPLRIGLAMAGFAAALLAVLLDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0310892_111372841	3300031858	Soil	VTLTALRFGLALAGFAVAVLAIALENHRLGWAAIALLIGSLIV
Ga0307406_101018122	3300031901	Rhizosphere	VTPLRIGLAVAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0308175_1000069849	3300031938	Soil	VSLTALRIGLALCGFLVAVLAIALEDHRLGWAAIALLIGSLIVRLIQRRMPM
Ga0326597_101379721	3300031965	Soil	VTLPGLNVLRRVLALAGFAAALMAVGFEDRRLGWAAIALLAG
Ga0307416_1006631323	3300032002	Rhizosphere	RIGLAVAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0310890_114186462	3300032075	Soil	SRGDRPVPPEVTPLRIGLAIAGFAAAVVAVMLDQPRVVWGAIALLTGSLIVRLLQRRGGV
Ga0307415_1016768331	3300032126	Rhizosphere	VTSLRTGLALAGFAAALLAVAFERPALVWAAIACLAVSLLFRIVQRGRSRPL
Ga0315910_115544162	3300032144	Soil	VTALRLGLVIAGLALAGITVLLDSPRLGWASIALLVGSLIVRLLQRNDAT
Ga0310812_100278622	3300032421	Soil	VTPLRIGLAIAGFAAAVVAVMLYQPRVVWGAIALLTGSLIVRLLQRRGGV
Ga0247829_100466203	3300033550	Soil	VTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNDGV
Ga0247829_101210803	3300033550	Soil	ERQRGGRGDRPVPPEVTPLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0247829_111084972	3300033550	Soil	VTLLRIGLAIAGFAAAVLAVILDQPRVVWGAIALLTGSLIVRLLQRRNGGV
Ga0373948_0045028_683_838	3300034817	Rhizosphere Soil	VTLTALRLGLALAGFAVAVLAIALENHRLGWAAIALLIGSLIVRLLQRRPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences