Metagenome Family F056485

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056485
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	64 residues
Representative Sequence	TRIVGELLPFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK
Number of Associated Samples	102
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	93.43 %
% of genes from short scaffolds (< 2000 bps)	85.40 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.891 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.547 % of family members)
Environment Ontology (ENVO)	Unclassified (37.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.825 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.83% β-sheet: 10.87% Coil/Unstructured: 66.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00027	cNMP_binding	15.33
PF00072	Response_reg	5.84
PF08734	GYD	5.11
PF14361	RsbRD_N	4.38
PF13884	Peptidase_S74	2.92
PF13333	rve_2	2.19
PF01527	HTH_Tnp_1	2.19
PF01594	AI-2E_transport	1.46
PF13751	DDE_Tnp_1_6	1.46
PF13683	rve_3	1.46
PF04355	SmpA_OmlA	1.46
PF13328	HD_4	1.46
PF03734	YkuD	1.46
PF04255	DUF433	0.73
PF11104	PilM_2	0.73
PF01042	Ribonuc_L-PSP	0.73
PF13620	CarboxypepD_reg	0.73
PF02518	HATPase_c	0.73
PF05960	DUF885	0.73
PF01797	Y1_Tnp	0.73
PF13185	GAF_2	0.73
PF06114	Peptidase_M78	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	5.11
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.46
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.46
COG2913	Outer membrane protein assembly factor BamE, lipoprotein component of the BamABCDE complex	Cell wall/membrane/envelope biogenesis [M]	1.46
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.46
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.73
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.73
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.73
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.89 %
Unclassified	root	N/A	5.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.89 %
Unclassified	root	N/A	5.11 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.89 %
Unclassified	root	N/A	5.11 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	58.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.84 %
Unclassified	root	N/A	5.11 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	58.39 %
Unclassified	root	N/A	5.11 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	48.18 %
Unclassified	root	N/A	5.11 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.46 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.18 %
Unclassified	root	N/A	5.11 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	1.46 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.46 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.18 %
Unclassified	root	N/A	5.11 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.46 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	1.46 %
Oceanospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.18 %
Unclassified	root	N/A	5.11 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	1.46 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.46 %
Oceanospirillum multiglobuliferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum → Oceanospirillum multiglobuliferum	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.18 %
Unclassified	root	N/A	5.11 %
Opitutaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium	1.46 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.46 %
Oceanospirillum multiglobuliferum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum → Oceanospirillum multiglobuliferum	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_102128927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300002099\|JGI24808J26613_1049796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300002909\|JGI25388J43891_1005535	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300005175\|Ga0066673_10009480	All Organisms → cellular organisms → Bacteria	4102	Open in IMG/M
3300005179\|Ga0066684_10053363	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300005179\|Ga0066684_10620630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300005179\|Ga0066684_11101792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300005180\|Ga0066685_10511781	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300005180\|Ga0066685_11128032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300005181\|Ga0066678_10427765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	879	Open in IMG/M
3300005187\|Ga0066675_10488020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	920	Open in IMG/M
3300005293\|Ga0065715_10310810	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300005434\|Ga0070709_11147832	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005437\|Ga0070710_10729941	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300005451\|Ga0066681_10094514	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300005451\|Ga0066681_10328158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300005454\|Ga0066687_10062990	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300005456\|Ga0070678_101546229	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005518\|Ga0070699_100953886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300005552\|Ga0066701_10474751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300005552\|Ga0066701_10946392	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300005553\|Ga0066695_10481918	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005553\|Ga0066695_10541271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	709	Open in IMG/M
3300005556\|Ga0066707_10052597	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300005556\|Ga0066707_10775290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	594	Open in IMG/M
3300005587\|Ga0066654_10298905	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300005587\|Ga0066654_10422751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300005764\|Ga0066903_100712557	All Organisms → cellular organisms → Bacteria	1772	Open in IMG/M
3300005764\|Ga0066903_101902939	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300006791\|Ga0066653_10460796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	647	Open in IMG/M
3300006794\|Ga0066658_10517247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300009012\|Ga0066710_103446436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	600	Open in IMG/M
3300009029\|Ga0066793_10042708	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300009137\|Ga0066709_101118090	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300009137\|Ga0066709_101423198	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300009137\|Ga0066709_101906325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	827	Open in IMG/M
3300009147\|Ga0114129_12268317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300009800\|Ga0105069_1019522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300010042\|Ga0126314_10322048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1106	Open in IMG/M
3300010048\|Ga0126373_11018226	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300010329\|Ga0134111_10056488	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300010329\|Ga0134111_10215216	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300010333\|Ga0134080_10609178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300010359\|Ga0126376_11790578	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300010359\|Ga0126376_11964064	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300010361\|Ga0126378_12053746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300010362\|Ga0126377_10324574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1527	Open in IMG/M
3300010364\|Ga0134066_10158946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300010376\|Ga0126381_102983628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300010401\|Ga0134121_10107960	All Organisms → cellular organisms → Bacteria	2340	Open in IMG/M
3300012198\|Ga0137364_10149647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium	1687	Open in IMG/M
3300012198\|Ga0137364_10643712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	799	Open in IMG/M
3300012198\|Ga0137364_10784084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300012198\|Ga0137364_10948214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	652	Open in IMG/M
3300012199\|Ga0137383_10443011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	952	Open in IMG/M
3300012199\|Ga0137383_10954770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012200\|Ga0137382_10021373	All Organisms → cellular organisms → Bacteria	3722	Open in IMG/M
3300012200\|Ga0137382_11013053	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300012201\|Ga0137365_10095713	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300012201\|Ga0137365_10197110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium	1506	Open in IMG/M
3300012202\|Ga0137363_10149921	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1831	Open in IMG/M
3300012202\|Ga0137363_10248807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1444	Open in IMG/M
3300012203\|Ga0137399_11789790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	503	Open in IMG/M
3300012205\|Ga0137362_11666443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300012206\|Ga0137380_11753318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012207\|Ga0137381_11588616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300012208\|Ga0137376_10268653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1480	Open in IMG/M
3300012210\|Ga0137378_10551204	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300012211\|Ga0137377_11144488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	708	Open in IMG/M
3300012211\|Ga0137377_11477017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300012211\|Ga0137377_11942627	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012285\|Ga0137370_10515478	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300012354\|Ga0137366_10325059	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300012354\|Ga0137366_11025334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012354\|Ga0137366_11150356	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300012355\|Ga0137369_10347009	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300012357\|Ga0137384_10946903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300012359\|Ga0137385_10387536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1193	Open in IMG/M
3300012359\|Ga0137385_11654763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012903\|Ga0157289_10170360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	688	Open in IMG/M
3300012917\|Ga0137395_10351919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1049	Open in IMG/M
3300012923\|Ga0137359_10295551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1443	Open in IMG/M
3300012948\|Ga0126375_10981793	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300012975\|Ga0134110_10115297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1093	Open in IMG/M
3300012977\|Ga0134087_10054860	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1579	Open in IMG/M
3300013297\|Ga0157378_10819555	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300014745\|Ga0157377_10572919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300018053\|Ga0184626_10395353	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300018071\|Ga0184618_10410476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300018075\|Ga0184632_10125859	Not Available	1128	Open in IMG/M
3300018076\|Ga0184609_10094637	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1336	Open in IMG/M
3300018433\|Ga0066667_10028399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3105	Open in IMG/M
3300018433\|Ga0066667_10694033	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300018482\|Ga0066669_10016648	All Organisms → cellular organisms → Bacteria	3972	Open in IMG/M
3300018482\|Ga0066669_12191794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300019886\|Ga0193727_1160726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300019890\|Ga0193728_1046470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2121	Open in IMG/M
3300020022\|Ga0193733_1108239	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300021073\|Ga0210378_10297916	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300021080\|Ga0210382_10155015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	983	Open in IMG/M
3300021344\|Ga0193719_10403409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300021363\|Ga0193699_10287000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300021411\|Ga0193709_1129626	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300021413\|Ga0193750_1079988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	611	Open in IMG/M
3300022534\|Ga0224452_1001516	All Organisms → cellular organisms → Bacteria → Proteobacteria	5365	Open in IMG/M
3300022534\|Ga0224452_1023967	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300022694\|Ga0222623_10266858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300025922\|Ga0207646_11645416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300025928\|Ga0207700_10335014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Oceanospirillum → Oceanospirillum multiglobuliferum	1314	Open in IMG/M
3300025928\|Ga0207700_10944867	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300025931\|Ga0207644_11198678	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300025944\|Ga0207661_10768378	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300026307\|Ga0209469_1018751	All Organisms → cellular organisms → Bacteria	2459	Open in IMG/M
3300026322\|Ga0209687_1051648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1332	Open in IMG/M
3300026324\|Ga0209470_1154265	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300026328\|Ga0209802_1179614	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300026343\|Ga0209159_1251119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300026528\|Ga0209378_1147572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	947	Open in IMG/M
3300026530\|Ga0209807_1163138	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300026536\|Ga0209058_1041735	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300026536\|Ga0209058_1315815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300026538\|Ga0209056_10130188	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1975	Open in IMG/M
3300026538\|Ga0209056_10304960	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300026538\|Ga0209056_10314999	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300026547\|Ga0209156_10254270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	813	Open in IMG/M
3300026548\|Ga0209161_10182144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1184	Open in IMG/M
3300026689\|Ga0208579_100862	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300028784\|Ga0307282_10392874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300028814\|Ga0307302_10469824	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300028814\|Ga0307302_10483302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300031231\|Ga0170824_105866980	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.62%
Host-Associated	Host-Associated	4.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.32%
Aquatic	Environmental → Aquatic	7.30%
Plants	Host-Associated → Plants	4.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.32%
Sediment	Environmental → Aquatic → Sediment	5.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.92%
Freshwater	Environmental → Aquatic → Freshwater	2.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.10%
Loam	Environmental → Terrestrial → Soil → Loam	8.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.73%
Sand	Environmental → Terrestrial → Soil → Sand	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.73%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.19%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.46%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026689	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN581 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1021289272	3300000955	Soil	PFAKNENVFATTRADERVMRYASDHGFEMSGKPYPSGRGYDLVLYLRNAAGFPDAK*
JGI24808J26613_10497961	3300002099	Soil	TRIVGELLAFAKNENIFATTRADERVLSFAFDCGFKINGKPFPSGNGYNLVLYLRNAHDYLR*
JGI25388J43891_10055351	3300002909	Grasslands Soil	GQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0066673_100094804	3300005175	Soil	STRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGRGYDLVLYLRNAHDYLR*
Ga0066684_100533631	3300005179	Soil	TRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGRGYDLVLYLRNAHDYLR*
Ga0066684_106206302	3300005179	Soil	QLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0066684_111017921	3300005179	Soil	TKSRQGRRLSTRIVGELLPFVKSENIFATTRADERVMSFASDYGFEINGKPYPSEHGYDLVLYLRNAARFRQVQ*
Ga0066685_105117811	3300005180	Soil	TRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0066685_111280321	3300005180	Soil	IVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0066678_104277653	3300005181	Soil	IVGELLPFAKNENVFATTRADERVMRYASDYEFEINGKPYPSGRGYDLVLYLRNPARFPDAK*
Ga0066675_104880203	3300005187	Soil	IGELLALARNENVFATTRIDDRAMRFASAHGFEPTGNAYPSGRGYNLVLYLHNAASQSTSEHQQTIN*
Ga0065715_103108101	3300005293	Miscanthus Rhizosphere	ELLPFAKNENIFATTRADERVMSFASDYGFKINGKRYPSGRGYDLVLYLRNASLRP*
Ga0070709_111478322	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FSTRIVSELLTYAKNENIFATTRTDERVLSFAFDCGFKINGEPFSSGNGYDLVLYLRNSHDYLR*
Ga0070710_107299412	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VGELLPFAKNENIFATTRPDERVLSFAFDYGFRINGKPFPSGQGYDLVLYLRNAHEITCGELATVFPVR*
Ga0066681_100945143	3300005451	Soil	GELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK
Ga0066681_103281582	3300005451	Soil	GELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDAK
Ga0066687_100629903	3300005454	Soil	QGRRLSTRMVGELLPFAKDQNIFATSRADERVMSFASDYGFKLHGKPYASGHGYDLVLYLRKVT*
Ga0070678_1015462291	3300005456	Miscanthus Rhizosphere	STRIVSELLTYAKNENIFATTRTDERVLSFAFDCGFKINGEPFSSGNGYDLVLYLRNSHDYLR*
Ga0070699_1009538861	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	QLSTRIVGELLTFAKNKNIFATTRVDERIMSFAPDYGFEINGKPYPSGRGYDLVLYLHNVY*
Ga0066701_104747511	3300005552	Soil	RLSTRIVSELLAFAKNENIFATTRTDERILSFAFDCGFKINGKPFPSGNGYDLVLYLRNAHDYLQ*
Ga0066701_109463921	3300005552	Soil	RRLSTRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0066695_104819182	3300005553	Soil	TRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLR*
Ga0066695_105412713	3300005553	Soil	GELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNPARFLDAK
Ga0066707_100525974	3300005556	Soil	LPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFSDAK*
Ga0066707_107752901	3300005556	Soil	AKTHQGRGLSTRIVGELLPFAKNENVFATTRADQRVMRYASDYEFEINGKPYPSGRGYDLVLYLRNPARFPDAK*
Ga0066654_102989051	3300005587	Soil	HQGQGLSTRIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDAK*
Ga0066654_104227513	3300005587	Soil	RIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKPARFPDAK*
Ga0066903_1007125573	3300005764	Tropical Forest Soil	KAYQGRRLSTRMVGELLPFVKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAEDYLQ*
Ga0066903_1019029393	3300005764	Tropical Forest Soil	NELLGFAKNENIFATTRADGRVLSFAFDCGFKINGKPFSSGQGYDLVLYLRNAHDYLR*
Ga0066903_1055243552	3300005764	Tropical Forest Soil	VVVAKKHQGRGLSTRIVGELLPLAQKENVFATTRADEGVMRYAPDHGFEINGKPYPSGRGYDLVLYLRNPARFPDAK*
Ga0066653_104607962	3300006791	Soil	PFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0066658_105172472	3300006794	Soil	RIVGELLPFAKNENVFATTRADQRVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0066710_1034464362	3300009012	Grasslands Soil	TRIVGELLPFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLHNAARFPDAK
Ga0066793_100427083	3300009029	Prmafrost Soil	ELLPFAKNENVFATTRADERIMRYASDHGFEINGKPYPSGRGYDLVLYLRKPARFPDAK*
Ga0066709_1011180901	3300009137	Grasslands Soil	TRIVGELLPFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLHNAARFPDAK*
Ga0066709_1014231981	3300009137	Grasslands Soil	KTHQGRGLSTRIVGELLPFAKNENVFATTRADQRVMRYASDYEFEINGKPYPSGRGYDLVLYLRNPARFPDAK*
Ga0066709_1019063252	3300009137	Grasslands Soil	GELLAFAKNENVFATMRADKRAMRCASDLGFKANGKPFASGRGYDIVLYLRNAARFPDVE
Ga0114129_122683171	3300009147	Populus Rhizosphere	LLPFAKNENIFATTRADERVLSFAFDYGFKINGTPYPSGHGYDLVLYLRNAHDYLR*
Ga0105069_10195221	3300009800	Groundwater Sand	RLSTRIVGELLAFAKNENIFATTRADERVLSFAFDCGFKINGKPFPSGNGYNLVLYLRNAHDYLR*
Ga0126314_103220481	3300010042	Serpentine Soil	QGRGLSTRIVGELLPFTENENIFATTRADERVMRYASDHGFEINGKAYPSGRGYDLVLYLRNTARFRREADVTL*
Ga0126373_110182261	3300010048	Tropical Forest Soil	HQGRGLSTRIVGELLPFAGNENVFATTRTDQRVMRYASDYGFEVNGKPYPSGRGYDLVLYLRNAARFPDAN*
Ga0134111_100564883	3300010329	Grasslands Soil	STRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFTINGKPFPSGRVYDLVLYLRNAHDYLR*
Ga0134111_100686532	3300010329	Grasslands Soil	AKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNPARFLDAK*
Ga0134111_102152161	3300010329	Grasslands Soil	GLSTRIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDAK*
Ga0134080_106091782	3300010333	Grasslands Soil	RIVGELLPFVKSENIFATTRADERVMSFASDYGFEINGKPYSSGHGYDLVLYLRNAARFREVQ*
Ga0126376_117905782	3300010359	Tropical Forest Soil	VAKSYQGRRLSTRIVSELLTFAKSENIFATTRADERVLSFAFDCGFTINGKPFPSGNGYDLVLYLRNSRDYLR*
Ga0126376_119640642	3300010359	Tropical Forest Soil	YQGRRLSTRIVGELLPFAKNENIFATTRADERVMSFASDYGFKTNGKPYASGHGYDLVLYLRDASLRP*
Ga0126378_120537462	3300010361	Tropical Forest Soil	HQGQQLSTRIVGELLTFAKNKNIFATTRADERIMSFASDYGFKINGQPYPSGRGYDLVLYLHDAC*
Ga0126377_103245742	3300010362	Tropical Forest Soil	AKNDNIFATTRADERVLSFAFDCGFKINGQPFPSGNGYNLVLYLRNARDYLR*
Ga0134066_101589461	3300010364	Grasslands Soil	RRLSTRMVGELLSFAKNQNIFATTRADERVMSFASDYGFKIHGKPYAGGHDYDLVLYLRKAT*
Ga0126381_1029836282	3300010376	Tropical Forest Soil	LSTRMVGELLPFAKNQNIFATTRADERVMSFASDYGFKINGEPYPSGHGYDLVLYLRNASLRP*
Ga0134121_101079605	3300010401	Terrestrial Soil	LLTFAKNENIFATTRADERVLSFAFDCGFKINGKPFPSGNGYDLVLYLRSSHDYLR*
Ga0137364_101496471	3300012198	Vadose Zone Soil	RIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFSDAK*
Ga0137364_106437122	3300012198	Vadose Zone Soil	LAFAMNENVFATMRADKRAMRCASDHGFKVNGKPFASGRGYDIVLYLRSAARFPDAE*
Ga0137364_107840841	3300012198	Vadose Zone Soil	IVGELLTFAKNKNIFATTQADERIMSFASDYGFEINGKPYPSGRGYDLVLYLHNAY*
Ga0137364_109482142	3300012198	Vadose Zone Soil	TKSHRGRRLSTRIVGQLLPFAKNENIFATTRADDRVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0137383_104430111	3300012199	Vadose Zone Soil	QGLRLWTRIVGELIAFAKNENVFATTRADKRAMRFASDHGFKLNGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137383_109547701	3300012199	Vadose Zone Soil	QGLRLWTRIVGELIAFAKNENVFATTRADKRAMRFASDHGFEVNGKPYPSGRGYDLVLYLSNAARFPDAK*
Ga0137382_100213732	3300012200	Vadose Zone Soil	VVAKSHQGLRLWTRIVGELIAFAKNENVFATTRADKRAMRFASDHGFKINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137382_110130531	3300012200	Vadose Zone Soil	TRIVGELITFAKNENVFATARADKQAPRFASDHGFKINGKPYPSGRGYDLVLYLRNAAGLPDAK*
Ga0137365_100957134	3300012201	Vadose Zone Soil	VGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137365_101971103	3300012201	Vadose Zone Soil	VGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFSDAK*
Ga0137363_101499214	3300012202	Vadose Zone Soil	PFSKIENLFATTRADERVMRYASDHVFEIKGKPYPSGRGYDLVLYLRNASRFPDAK*
Ga0137363_102488071	3300012202	Vadose Zone Soil	ELLTFAKNKNIFATTRADERIMSFASDYGFEINGKPYPSGRGYDLVLYLHNAY*
Ga0137399_117897901	3300012203	Vadose Zone Soil	LIAFAKNENIFATTRADKRAMRFASDHGFKINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137362_116664431	3300012205	Vadose Zone Soil	VSELLAFAKNENIFATTRADERVLSFAFDCGFKIDGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0137380_117533181	3300012206	Vadose Zone Soil	TFAKNKNIFATTRADERIMSFASDYGFEINGKPYPSGRGYDLVLYLHNAH*
Ga0137381_115886162	3300012207	Vadose Zone Soil	GLSTRIVGELLPFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNPARFLDAK*
Ga0137376_102686534	3300012208	Vadose Zone Soil	LTFAKNKNIFATTRADERIMSFASDYGLEINGKPYPSGRGYDLVLYLHNAY*
Ga0137378_105512042	3300012210	Vadose Zone Soil	AKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFSDAK*
Ga0137377_111444882	3300012211	Vadose Zone Soil	RIVGELIAFAKNENVFATTRADKRAMRFASDHGFKLNGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137377_114770171	3300012211	Vadose Zone Soil	GLRLWTRIVGELIAFAKNENVFATTRADKRAMRFASDHGFEVNGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137377_119426272	3300012211	Vadose Zone Soil	VVTKSRQGRRLSTRIVGELLPFVKNENIFATTRADERVISFASDYGFEINGKPYPSGRGYDLVLYIRKPAGFPDAK*
Ga0137370_105154781	3300012285	Vadose Zone Soil	LWTRIVGELIAFAKNENIFATTRADKRAMRFASDHGFEVNGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137366_103250593	3300012354	Vadose Zone Soil	MVGELLPFAKNQNIFATTRADERVMSFASDYGFKLHGKPYASGHGYDLVLYLRKAT*
Ga0137366_110253341	3300012354	Vadose Zone Soil	AFAKNENVFATTRADKRAMRFASDHGFKLNGRPYPSGRGYDLVLYLRNAPRFPDAK*
Ga0137366_111503561	3300012354	Vadose Zone Soil	TFAKNENIFATTRADERVLSFAFDCGFKINGKPFPSGNGYDLVLYLRNSHDYLR*
Ga0137369_103470092	3300012355	Vadose Zone Soil	STRIVSELLTFAKNENIFATTRADERVLSFAFDCGFKINGKPFPSGNGYDLVLYLRNSHDYLR*
Ga0137384_109469031	3300012357	Vadose Zone Soil	GLSTRIVGELLPFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137385_103875361	3300012359	Vadose Zone Soil	HQGHRLSTRIVGELIAFAKNENVFATARADKQAPRFASDHGFKINGKPYPSGRGYDLVLYLRNAAGFPAAK*
Ga0137385_116547631	3300012359	Vadose Zone Soil	LSTRIVGELLAFAKNENIFATTRADERVLSFAFDCGFKIDGKPFPSGHGYDLVLYLRNAHDYLR*
Ga0137361_111667982	3300012362	Vadose Zone Soil	FAKNKNIFATTRADERIMSFASDYGFEINGKPYPSGRGYDLVLYLHNAY*
Ga0137373_101525075	3300012532	Vadose Zone Soil	VVVAKSYQGRRLSTRIVGELLPFAKNENIFATARADERVLSFAFDCGFKINGKPFPSDNGYNLVLYLRNAHDYLR*
Ga0137358_108723171	3300012582	Vadose Zone Soil	NVFATTRADKRAMRFASDHGFEVNGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0157289_101703601	3300012903	Soil	MKLSRFFGAPRLSTRIVSELLAFAKNENIFATTRTDERVLSFAFDCGFKINGKPFPSGNGDDLVLYLRNSHDYLQ*
Ga0137395_103519191	3300012917	Vadose Zone Soil	TRIVGELLPFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK*
Ga0137359_102955513	3300012923	Vadose Zone Soil	VVAKAHQGRGLSTRIVGELLPFAKNENVFATTRADQRVMRYASDHGFEINGKPYPSGRGYDLVLYLRNPARFPDVK*
Ga0126375_109817931	3300012948	Tropical Forest Soil	RRLSTRIVSELLPFARNQNIYATTRADERVLSFAFDCGFKINGKPFPSGNGDDLVLYLRKAGEV*
Ga0134110_101152971	3300012975	Grasslands Soil	TRIVGELLPFAKDENVFATTRADQRVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDAK*
Ga0134087_100548601	3300012977	Grasslands Soil	LLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ*
Ga0157378_108195552	3300013297	Miscanthus Rhizosphere	KSHQGRRFSTRIVSELLTYAKNENIFATTRTDERVLSFAFDCGFKINGEPFSSGNGYDLVLYLRNSHDYLR*
Ga0157377_105729192	3300014745	Miscanthus Rhizosphere	ELLAFAKNENIFATTRTDERVMSFAFDCGFKINGKPFPSGNGYDLVLYLRNARDYLR*
Ga0187822_101359962	3300017994	Freshwater Sediment	VVVAKAHQGRRLSTRVVSELLPFARHQNIYGTTRADERVLSFAFDCGFSVNGKPFPSGHGYDLVLYLRNAHDFLR
Ga0184626_103953531	3300018053	Groundwater Sediment	IVGELLTFAKDENVFATTRADKRAMRFASDHGFKINGKPYPSGRGYDLVLYLRNAPRFPDAK
Ga0184618_104104762	3300018071	Groundwater Sediment	FAKNENVFATTRVDKRAMRFASEHGFKIDGKPYPSGRGYDLVLYLRNAAGFPEAK
Ga0184632_101258591	3300018075	Groundwater Sediment	VVVARSHQGQRLSTRIVDELIALAKNENVFATARADKRAPRFASDHGFKLNGKPYPSGRDYDLVLYLRNAARLPDAK
Ga0184609_100946371	3300018076	Groundwater Sediment	ALAKNENVFATARADKRAPRFASDHGFKLNGKPYPSGRDYDLVLYLRNAARLPDAK
Ga0066667_100283991	3300018433	Grasslands Soil	VAKAHQGQGLSTRIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDAK
Ga0066667_106940332	3300018433	Grasslands Soil	WTRMFGDLLPFAKDQNIFATSRADERVMSFASDYGFKLHGKPYASGHGYDLVLYLRKVT
Ga0066669_100166484	3300018482	Grasslands Soil	STRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGCGYDLVLYLRNAHDYLR
Ga0066669_121917942	3300018482	Grasslands Soil	VGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDA
Ga0193727_11607263	3300019886	Soil	GRGLSTRIVGELLTFAKNENVFATTRADERVMRYASDYGFEINGKPYPSGRGYDLVLYLRNAARFPDAK
Ga0193728_10464702	3300019890	Soil	GQRLWTRIVGELITLAKNENVFATTRADKRAMRFASDHGFKINGKPYPSGRGYDLVLYLRDAARFPDAK
Ga0193733_11082392	3300020022	Soil	QGRRLSTRIVSELLAFAKDENIFATTRTDERVLSFAFDCGFKINGKPFSSGNGYDLVLYLRNARDYLQ
Ga0210378_102979161	3300021073	Groundwater Sediment	LSTRIVGELLTFAKNENIFATARADKRAPRFASDHGFKINGKPYPSGRGYDLVLYLRNAARFPDAK
Ga0210382_101550153	3300021080	Groundwater Sediment	LSIRIVGELLSFAKNENIFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK
Ga0193719_104034092	3300021344	Soil	GQLLSTRIVGELLTFAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRDAARFPDAK
Ga0193699_102870001	3300021363	Soil	AKNENIFATTRSDERVLSFAFDCGFKINGKPFPSGNGDDLVLYLRNSHDYLR
Ga0193709_11296262	3300021411	Soil	QGRRLSTRIVSGLLAFAKNENIFATTRADERVLSFAFDCGFKTNGKLFPSGNGYDLVLYLRNAHDYLR
Ga0193750_10799881	3300021413	Soil	STRIVGELLPFAKNDNIFATTRTDERVLSFAFDYGFKANGNPFPSGHGYDLVLYLRSAHDYLR
Ga0224452_10015166	3300022534	Groundwater Sediment	VVAKSYQGRRLSTRIVSELLAFAKNENIFATTRTDERVLSFAFDCGFKINGKPFPSGNGYDLVLYLRNAHDYLQ
Ga0224452_10239673	3300022534	Groundwater Sediment	RLSTRIVGELLTFAKNENVFATTRTDERVLSFAFDCGFKINGTAFPSGHGYDLVLYLRNSHDYLR
Ga0222623_102668581	3300022694	Groundwater Sediment	VGELISLAKNENVFATTRVDKRAMRFASEHGFKINGKPYPSGRGYDLVLYLRNAARFPDA
Ga0207646_116454161	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SYQGRRLSTRIVGELLPLAKNENIFATTRADERVMSFAFDYGFRINGKPFPSGHGYDLVLYLRNAHDYLR
Ga0207700_103350143	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HQGRRLSTRIVGELLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLR
Ga0207700_109448672	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GRRLSTRIVGELLPFAKNENIFATTRADERVMSFAFDYGFRINGKPFPSGHGYDLVLYLRNAHDYLR
Ga0207644_111986781	3300025931	Switchgrass Rhizosphere	SHQGRRFSTRIVSELLTYAKNENIFATTRTDERVLSFAFDCGFKINGEPFSSGNGYDLVLYLRNSHDYLR
Ga0207661_107683781	3300025944	Corn Rhizosphere	AKSYQGRRLSTRIVSELLAFAKDENIFATTRTDERVLSFAFDCGFKINGKPFSSGNGYDLVLYLRNAHDYLQ
Ga0209469_10187511	3300026307	Soil	LPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGCGYDLVLYLRNAHDYLR
Ga0209687_10516484	3300026322	Soil	LLTFAKNKNIFATTRADERIMSFASDYGFEINGKPYPSGRGYDLVLYLHNAY
Ga0209470_11542653	3300026324	Soil	LSTRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ
Ga0209802_11796143	3300026328	Soil	LAKNENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK
Ga0209159_12511191	3300026343	Soil	RLSTRIVGELLPFVKSENIFATTRADERVMSFASDYGFEINGKPYPSGHGYDLVLYLRNAARFREVQ
Ga0209378_11475722	3300026528	Soil	GELLTFAKNKNIFATTRADERIMSFASDYGFEINGKPYPSGRGYDLVLYLHNAY
Ga0209807_11631381	3300026530	Soil	STRIVGQLLPFAKNENIFATTRADERVLSFAFDYGFKINGKPFPSGHGYDLVLYLRNAHDYLQ
Ga0209058_10417351	3300026536	Soil	RIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFPDAK
Ga0209058_13158152	3300026536	Soil	TRIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKPARFPDAK
Ga0209056_101301884	3300026538	Soil	IVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNPARFLDAK
Ga0209056_103049601	3300026538	Soil	IVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRKSARFSDAK
Ga0209056_103149993	3300026538	Soil	IVGELLPFAKNENVFATTRADQRVMRYASDYEFEINGKPYPSGRGYDLVLYLRNPARFPDAK
Ga0209156_102542701	3300026547	Soil	VVAKAHQGQGLSTRIVGELLPFAKDENVFATTRADERVMRYASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDAK
Ga0209161_101821441	3300026548	Soil	RGLSTRIVGELLPLAKNENVFATTRADERVMRYASDYEFEINGKPYPSGRGYDLVLYLRNPARFPDAK
Ga0208579_1008621	3300026689	Soil	TRIVGELLPFAKNENIFATTRADERVMSFASDYGFEINGKPYLSGHGYDLVLCLRNATRFPAGQ
Ga0307282_103928741	3300028784	Soil	PFAKDENVFATTWADQRVMRYASDHGFEINGKPYPSGRGYDLVLYLRNASRFPDAK
Ga0307302_104698241	3300028814	Soil	VGELLTFAKNENVFATTRADQRVMRFASDHGFKINGKPYPSGRGYDLVLYLRDAARFPDA
Ga0307302_104833022	3300028814	Soil	ELIALAKNENIFATTRVDKRAMRFASDHGFEINGKPYPSGRGYDLVLYLRNAARFPDTK
Ga0170824_1058669802	3300031231	Forest Soil	LSTRIVGELLPFAKNENVFATTRADERVMRYASDYEFEINGKPYPSGRGYDLVLFLRNPARFPDAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056485

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences