Metagenome / Metatranscriptome Family F056424

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056424
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	65 residues
Representative Sequence	SSYMEENTVVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Number of Associated Samples	106
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.47 %
% of genes near scaffold ends (potentially truncated)	81.02 %
% of genes from short scaffolds (< 2000 bps)	82.48 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.431 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.248 % of family members)
Environment Ontology (ENVO)	Unclassified (32.847 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.285 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 21.11% Coil/Unstructured: 58.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF06271	RDD	16.79
PF13240	zinc_ribbon_2	11.68
PF00691	OmpA	2.92
PF00753	Lactamase_B	2.92
PF13248	zf-ribbon_3	2.19
PF13533	Biotin_lipoyl_2	2.19
PF12704	MacB_PCD	2.19
PF00196	GerE	1.46
PF07238	PilZ	1.46
PF04264	YceI	1.46
PF14690	zf-ISL3	0.73
PF13519	VWA_2	0.73
PF00092	VWA	0.73
PF00873	ACR_tran	0.73
PF16576	HlyD_D23	0.73
PF13565	HTH_32	0.73
PF00848	Ring_hydroxyl_A	0.73
PF03023	MurJ	0.73
PF13181	TPR_8	0.73
PF13358	DDE_3	0.73
PF13683	rve_3	0.73
PF01103	Omp85	0.73
PF06826	Asp-Al_Ex	0.73
PF03200	Glyco_hydro_63	0.73
PF00924	MS_channel	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	16.79
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	1.46
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.46
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.73
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.73
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2985	Uncharacterized membrane protein YbjL, putative transporter	General function prediction only [R]	0.73
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.43 %
Unclassified	root	N/A	6.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.43 %
Unclassified	root	N/A	6.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.43 %
Unclassified	root	N/A	6.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	22.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	16.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.30 %
Unclassified	root	N/A	6.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.98 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	16.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	7.30 %
Unclassified	root	N/A	6.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	16.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	7.30 %
Unclassified	root	N/A	6.57 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.79 %
Unclassified	root	N/A	6.57 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	3.65 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	2.92 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.79 %
Unclassified	root	N/A	6.57 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	3.65 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.79 %
Unclassified	root	N/A	6.57 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	3.65 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	2.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.79 %
Unclassified	root	N/A	6.57 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	3.65 %
Solitalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea	2.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Sphingobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium	0.73 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.79 %
Unclassified	root	N/A	6.57 %
Flavobacterium denitrificans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium denitrificans	2.19 %
Solitalea canadensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	2.19 %
unclassified Flavobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
unclassified Sphingobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium	0.73 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	16.79 %
Unclassified	root	N/A	6.57 %
Flavobacterium denitrificans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium denitrificans	2.19 %
Solitalea canadensis	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	2.19 %
Flavobacterium sp. fv08	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. fv08	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.46 %
Sphingobacterium sp. IITKGP-BTPF85	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. IITKGP-BTPF85	0.73 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10007379	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300003368\|JGI26340J50214_10074969	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300004152\|Ga0062386_101119454	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300004152\|Ga0062386_101663323	Not Available	532	Open in IMG/M
3300004631\|Ga0058899_11951324	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	502	Open in IMG/M
3300005165\|Ga0066869_10115874	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	550	Open in IMG/M
3300005166\|Ga0066674_10479184	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Solitalea → Solitalea canadensis	564	Open in IMG/M
3300005330\|Ga0070690_100808588	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005434\|Ga0070709_10827832	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300005451\|Ga0066681_10052433	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300005576\|Ga0066708_10643486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300006050\|Ga0075028_100942321	Not Available	534	Open in IMG/M
3300006059\|Ga0075017_100924701	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	677	Open in IMG/M
3300006804\|Ga0079221_10284787	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300007255\|Ga0099791_10000360	All Organisms → cellular organisms → Bacteria	16577	Open in IMG/M
3300007258\|Ga0099793_10057053	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300007258\|Ga0099793_10106195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1303	Open in IMG/M
3300007265\|Ga0099794_10201921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300007788\|Ga0099795_10239003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300010047\|Ga0126382_12130269	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300010048\|Ga0126373_10536532	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300010048\|Ga0126373_11804782	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010048\|Ga0126373_12408384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300010159\|Ga0099796_10110259	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300010359\|Ga0126376_10571462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1063	Open in IMG/M
3300010361\|Ga0126378_11073052	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300010361\|Ga0126378_12919425	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300010364\|Ga0134066_10003958	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300010376\|Ga0126381_100007499	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12144	Open in IMG/M
3300010376\|Ga0126381_101600349	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300010376\|Ga0126381_103000871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300011120\|Ga0150983_11864868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300011120\|Ga0150983_14048323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012202\|Ga0137363_10237085	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300012685\|Ga0137397_10007807	All Organisms → cellular organisms → Bacteria	7441	Open in IMG/M
3300012918\|Ga0137396_10550297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300012923\|Ga0137359_10055971	All Organisms → cellular organisms → Bacteria	3432	Open in IMG/M
3300012925\|Ga0137419_10234737	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Sphingobacterium → unclassified Sphingobacterium → Sphingobacterium sp. IITKGP-BTPF85	1375	Open in IMG/M
3300012925\|Ga0137419_10558008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300012927\|Ga0137416_11752245	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012958\|Ga0164299_10867328	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300012971\|Ga0126369_10865692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	988	Open in IMG/M
3300012976\|Ga0134076_10256273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300013308\|Ga0157375_10522187	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300014165\|Ga0181523_10531694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300015054\|Ga0137420_1381487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300015054\|Ga0137420_1487525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300016294\|Ga0182041_10108998	All Organisms → cellular organisms → Bacteria	2053	Open in IMG/M
3300016294\|Ga0182041_11159568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300016341\|Ga0182035_10694673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	886	Open in IMG/M
3300016371\|Ga0182034_10041882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	2961	Open in IMG/M
3300016371\|Ga0182034_10386497	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300016371\|Ga0182034_10465584	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300016371\|Ga0182034_12019342	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300016404\|Ga0182037_10461437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300016404\|Ga0182037_10555668	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300016445\|Ga0182038_10701349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	881	Open in IMG/M
3300017930\|Ga0187825_10121233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300017943\|Ga0187819_10077987	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300017975\|Ga0187782_10028179	All Organisms → cellular organisms → Bacteria	4087	Open in IMG/M
3300017999\|Ga0187767_10148590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300018085\|Ga0187772_10036326	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2958	Open in IMG/M
3300018482\|Ga0066669_11023497	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300020199\|Ga0179592_10022650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2803	Open in IMG/M
3300020199\|Ga0179592_10046433	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300020199\|Ga0179592_10481113	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium denitrificans	533	Open in IMG/M
3300020579\|Ga0210407_10821739	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	716	Open in IMG/M
3300020580\|Ga0210403_11243312	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300020581\|Ga0210399_11206906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300021171\|Ga0210405_10538681	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300021171\|Ga0210405_10939331	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300021433\|Ga0210391_10910356	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300021478\|Ga0210402_11229916	Not Available	676	Open in IMG/M
3300022532\|Ga0242655_10230856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300022726\|Ga0242654_10250437	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. fv08	635	Open in IMG/M
3300024288\|Ga0179589_10534854	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium denitrificans	545	Open in IMG/M
3300024330\|Ga0137417_1133462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1355	Open in IMG/M
3300024330\|Ga0137417_1170167	Not Available	894	Open in IMG/M
3300025906\|Ga0207699_10300556	Not Available	1121	Open in IMG/M
3300026285\|Ga0209438_1006841	All Organisms → cellular organisms → Bacteria → Proteobacteria	3854	Open in IMG/M
3300026304\|Ga0209240_1061535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1405	Open in IMG/M
3300026446\|Ga0257178_1010016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300026482\|Ga0257172_1014844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1327	Open in IMG/M
3300026557\|Ga0179587_10198099	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300026557\|Ga0179587_10952599	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → Flavobacterium denitrificans	565	Open in IMG/M
3300026817\|Ga0207775_103984	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300026928\|Ga0207779_1010296	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300027003\|Ga0207722_1004673	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300027024\|Ga0207819_1013989	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300027071\|Ga0209214_1027243	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300027376\|Ga0209004_1018218	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300027516\|Ga0207761_1100537	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300027655\|Ga0209388_1006561	All Organisms → cellular organisms → Bacteria	3025	Open in IMG/M
3300027663\|Ga0208990_1037360	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300027671\|Ga0209588_1036800	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300027812\|Ga0209656_10014639	All Organisms → cellular organisms → Bacteria	4885	Open in IMG/M
3300027812\|Ga0209656_10189908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1002	Open in IMG/M
3300027829\|Ga0209773_10060716	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1536	Open in IMG/M
3300027898\|Ga0209067_10650807	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300027898\|Ga0209067_10689536	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300031231\|Ga0170824_103628309	All Organisms → cellular organisms → Bacteria	2591	Open in IMG/M
3300031231\|Ga0170824_105318648	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium → unclassified Flavobacterium → Flavobacterium sp. fv08	519	Open in IMG/M
3300031682\|Ga0318560_10702438	Not Available	547	Open in IMG/M
3300031719\|Ga0306917_10063702	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2530	Open in IMG/M
3300031719\|Ga0306917_10533104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	922	Open in IMG/M
3300031744\|Ga0306918_11031447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300031744\|Ga0306918_11433786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031753\|Ga0307477_10783800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300031754\|Ga0307475_10058107	Not Available	2926	Open in IMG/M
3300031754\|Ga0307475_10536025	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300031754\|Ga0307475_10677451	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031771\|Ga0318546_11105249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300031797\|Ga0318550_10414527	Not Available	652	Open in IMG/M
3300031819\|Ga0318568_11057057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300031833\|Ga0310917_10273881	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300031890\|Ga0306925_10114135	All Organisms → cellular organisms → Bacteria	2885	Open in IMG/M
3300031910\|Ga0306923_10923011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	955	Open in IMG/M
3300031910\|Ga0306923_11546253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300031941\|Ga0310912_10317947	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300031942\|Ga0310916_10067019	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300031947\|Ga0310909_10438838	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300031962\|Ga0307479_10347506	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300032059\|Ga0318533_10516378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	876	Open in IMG/M
3300032064\|Ga0318510_10294026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300032076\|Ga0306924_11635249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300032174\|Ga0307470_11322217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300032180\|Ga0307471_100009307	All Organisms → cellular organisms → Bacteria	6494	Open in IMG/M
3300032180\|Ga0307471_101077904	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300032205\|Ga0307472_100000152	All Organisms → cellular organisms → Bacteria	21443	Open in IMG/M
3300032205\|Ga0307472_100544610	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300032205\|Ga0307472_100894478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300032782\|Ga0335082_10262078	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1608	Open in IMG/M
3300032893\|Ga0335069_10577281	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300032897\|Ga0335071_10350096	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300032955\|Ga0335076_10732983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	870	Open in IMG/M
3300033004\|Ga0335084_10045449	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.27%
Host-Associated	Host-Associated	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.78%
Aquatic	Environmental → Aquatic	9.49%
Plants	Host-Associated → Plants	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.78%
Freshwater	Environmental → Aquatic → Freshwater	6.57%
Sediment	Environmental → Aquatic → Sediment	2.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.99%
Loam	Environmental → Terrestrial → Soil → Loam	10.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.19%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.19%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026928	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 44 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_100073792	3300002907	Grasslands Soil	VAFKRFSAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLVKQLKKEALHKNS*
JGI26340J50214_100749692	3300003368	Bog Forest Soil	QFCPTNSYTTENTIVRAEFNLYNTKDEKLIWSGETDTVYSKDFQKLGKQYAEMLVKQLKKDKVIGKK*
Ga0062386_1011194541	3300004152	Bog Forest Soil	SSYTKENVIVRAEFNLYNTKDEKLLWSGETDTVYSKDFQKLGKQYAEMLVKQLKKDKVIGKK*
Ga0062386_1016633231	3300004152	Bog Forest Soil	VYPISSYTKEHTIVIAEFNLYNTKTEKLIWNGETETRYTKDFGKLGKEYAKTIVKQLKKDKVIGAK*
Ga0058899_119513241	3300004631	Forest Soil	ETTSSFHSTSSYTRENTIVRAEFNLYNAKDEKLLWSGETDTVYSEDFDKLGKDYAKMLVKQLKRDKVIGHQ*
Ga0066869_101158741	3300005165	Soil	VRAEFNLYNTKDEKLLWSGETDTVYSKDFEKLGKSYAKMLVNQLKRDKVITKK*
Ga0066674_104791841	3300005166	Soil	AAYYNFWPYWNMAWGQAYPTSSSVKEYTYVSTEFNLYNTKDEKLLWSGETESAYSKNFGKLAREYARALVTQLKKDKVIGTK*
Ga0070690_1008085882	3300005330	Switchgrass Rhizosphere	YVSTEFNLYNMKDEKLLWSGETESVYSKDFGKLAKGYASTLVKQLKNDRVIGTK*
Ga0070709_108278322	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TYSQFSTSSYMEENTIVSAEFNLYYTKDEKLLWSGETDTVYSKDFGKLGKEYASALIKQLKKDKVIGKK*
Ga0066681_100524331	3300005451	Soil	QNLWPYWDMAFKQFSAKGSYLKENTMVSAEFNLYHTKDETLLWSGETDTVYSENFEKLGKEYARALVKQLRKDKVI*
Ga0066708_106434861	3300005576	Soil	SAEFNLYRTADETLLWSGETDTVYSKNFEKLAKEYANTLVKQLKKDKVIPKS*
Ga0075028_1009423211	3300006050	Watersheds	MTYSQFSATSYMEENTIVTAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYASALVRQLKKDKVIGKE*
Ga0075017_1009247012	3300006059	Watersheds	TSSYTRENTIVRADFNLYNVADEKLIWCGETDTVYSKDFDKLGKDYAQLLVKQLKKDKVINKK*
Ga0079221_102847871	3300006804	Agricultural Soil	TIVSAEFNLYRTNDEALLWSGETDTVYSKNFGKLAREYAETLVKQLKKDKVLPKG*
Ga0099791_1000036012	3300007255	Vadose Zone Soil	MAWGNANATSSYVKEDTYVGTEFKLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK*
Ga0099793_100570532	3300007258	Vadose Zone Soil	MAWGNANATSSYVKEDTYVGTEFKLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKENVIGTK*
Ga0099793_101061952	3300007258	Vadose Zone Soil	VAFKRFSAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLVKQLKKDKVI*
Ga0099794_102019212	3300007265	Vadose Zone Soil	VAFKRFSAKGSYLEKNTIVSAEFNLYRTNDETLLWSGDTDTVYSENFGKLAREYANTLVKQLKKDKDI*
Ga0099795_102390031	3300007788	Vadose Zone Soil	MEEHTIVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALGRQLKKDKVIGKK*
Ga0126382_121302691	3300010047	Tropical Forest Soil	QENIVIRVEVNFYNVKDEKLVWSGETDTVYSKDFEKLGKQYARALVKQLKRDKVIGPK*
Ga0126373_105365322	3300010048	Tropical Forest Soil	RVEVNMYNVRDEKLVWSGETDTVYSKDFEKLGKDYAKTLVKQLKRDKVIGQK*
Ga0126373_118047822	3300010048	Tropical Forest Soil	RVEVNMYNVRDEKLVWSGETDTVYSKDFEKLGKEYAKTLVKQLKRDKVIGQK*
Ga0126373_124083842	3300010048	Tropical Forest Soil	GSYLKENTIVSAEFNLYRTKDETLLWSGETDTVYSKNFGKLAKEYANALVKQLKRDKLIQGS*
Ga0099796_101102592	3300010159	Vadose Zone Soil	KEDTYVSTEFNLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK*
Ga0126376_105714623	3300010359	Tropical Forest Soil	GNFIPTSSYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKKK*
Ga0126378_110730522	3300010361	Tropical Forest Soil	VRVEVNMYNVRDEKLVWSGETDTVYSKDFEKLGKDYAKTLVKQLKRDKVIGQK*
Ga0126378_129194251	3300010361	Tropical Forest Soil	NIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKKK*
Ga0134066_100039581	3300010364	Grasslands Soil	VTSLGARFYMPPAAYYNFWPYWNMAWGQAYPSSSSVKEYTYVSTEFNLYNTKDEKLLWSGETESAYSKNFGKLAREYARALVTQLKKDKVIGTK*
Ga0126381_1000074998	3300010376	Tropical Forest Soil	YQNLWPYWDMAFKQYSAKGSYLKENTIVSAEFNLYSTKDETLLWSGETDTVYSKDFEKLGKEYASALVKQLKQDKVI*
Ga0126381_1016003491	3300010376	Tropical Forest Soil	IVSAEFNLYSTKDETLLWSGETDTVYSENFEKLGKEYASALVKQLKKDKVI*
Ga0126381_1030008711	3300010376	Tropical Forest Soil	YQNLWPYWDMAFKQYSAKGSYLKENTIVSAEFNLYSTKDETLLWSGETDTVYSKNFEKLGKEYASALVKQLKKDKVI*
Ga0150983_118648682	3300011120	Forest Soil	EDIIVRVEFNLYSTKDEKLVWSGESDTLYSENFEKLGKGYAQALVNQLRKDKVIRKK*
Ga0150983_140483232	3300011120	Forest Soil	ETASSFHSTSSYTRENTIVRAEFNLYNAKDEKLLWSGETDTVYSEDFDKLGKDYAKMLVKQLKRDKVIGHQ*
Ga0137363_102370852	3300012202	Vadose Zone Soil	MEENTVVSAEFNLYYAKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIRKK*
Ga0137397_100078075	3300012685	Vadose Zone Soil	VAFKRFSAKGSYLEKNTIVSAESNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLVKQLKKDKVI*
Ga0137396_105502972	3300012918	Vadose Zone Soil	VAFKRFSAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLLKQLKKDKVI*
Ga0137359_100559713	3300012923	Vadose Zone Soil	MAFKQFSAKGSYLKENTVVRAEFNLYRINDETLLWSGETDTVYSENFETLAKKYANTLVKQLKKDKVI*
Ga0137419_102347371	3300012925	Vadose Zone Soil	MAWGNAYARSSYVKEDTYVSTEFNLYNLKGEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK*
Ga0137419_105580082	3300012925	Vadose Zone Soil	MGLLWPTTISGPYWNMAWGKAYRTSSSVKEYTYVSTEFNLYNTKDEKLLWSGETESVYSKNFGKWAREYARALVTQLKRDKVIGTK*
Ga0137416_117522452	3300012927	Vadose Zone Soil	VPPAAYSNFWPYWNMAWGNANATSSYVKEDTYVGTEFKLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK*
Ga0164299_108673281	3300012958	Soil	KENTYVSTEFNLYNMKDEKLLWSGETESVYSKDFGKLAKGYASTLVKQLKNDRVIGTK*
Ga0126369_108656922	3300012971	Tropical Forest Soil	PTSSYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKKK*
Ga0134076_102562732	3300012976	Grasslands Soil	YWDMAFKQFSAKGSYLKENTMVSAEFNLYHTKDETLLWSGETDTVYSENFEKLGKEYARALVKQLRKDKVI*
Ga0157375_105221873	3300013308	Miscanthus Rhizosphere	YTSNSYTKENTYVSTEFNLYNMKDEKLLWSGETESVYSKDFGKLAKGYASTLVKQLKNDRVIGTK*
Ga0181523_105316942	3300014165	Bog	WPYWTIAYGNFYPTSWYSKESIVVRVEFNLYSTKDERLVWSGETDTIYSMDFEKLGKEYAQALVNQLKKDKIIRKSSAPLTPQH*
Ga0137420_13814871	3300015054	Vadose Zone Soil	SAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLVKQLKKDKVI*
Ga0137420_14875251	3300015054	Vadose Zone Soil	SAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLLKQLKKDKVI*
Ga0182041_101089981	3300016294	Soil	SSYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDAVIKKK
Ga0182041_111595681	3300016294	Soil	QENIIVGVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKKK
Ga0182035_106946732	3300016341	Soil	IIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDAVIKKK
Ga0182034_100418821	3300016371	Soil	IRAEFNLYNTKDEKLLWSGETDTVYTKNFSKLGKEYARALVKQLKKDKVIKTK
Ga0182034_103864973	3300016371	Soil	YTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKKK
Ga0182034_104655841	3300016371	Soil	VRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDRVIRKK
Ga0182034_120193422	3300016371	Soil	IVRAEFNLYDAKNEKLVWSGETDTAYSKDFDKLGKDYAQLLVKRLKKDKVIGKK
Ga0182037_104614371	3300016404	Soil	LYDTKSEKLVWNGESDTVYSKDFEKLGKNYAKSLIDQLKRDKVLRKKWPQPPSD
Ga0182037_105556682	3300016404	Soil	RTEENVIVRVEVNFYNVKDEKLVWSAETDTVYSKDFEKLGKDYAKTLVKQLKRDKVIGQK
Ga0182038_107013492	3300016445	Soil	QENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIKKK
Ga0187825_101212331	3300017930	Freshwater Sediment	KQFSAKGSYLKENTIVSAEFNLYRTMDEKLLWSGETDTVYSKSFGKLAKEYASTLVKRLKKDKVI
Ga0187819_100779873	3300017943	Freshwater Sediment	TYVTTEFNLYNIKDEKLLWSGETESVYSKDFGKLAREYARALFKQLKKDKVIGTK
Ga0187782_100281791	3300017975	Tropical Peatland	MRFEFNLYSTKDEMLIWSGESDTLYSKDFRKLGKEYAQTLVYQLKKDRVLRKK
Ga0187767_101485902	3300017999	Tropical Peatland	TSSYTKENVVVRVEFNLYNTKDEKLVWSGETDTIYSKDFEKLGKDYAKTLVAQLKRDKVIRKK
Ga0187772_100363264	3300018085	Tropical Peatland	PGYYNLWPYSHLAWSQASLTGSYFQENTVVHAQFNLYSTKDEKLLWSGETDTVYSKDFKKLGREYARAIVKQLKKDKVIGNK
Ga0066669_110234971	3300018482	Grasslands Soil	PPAAYYNFWPYWNMAWGQAYPSSSSVKEYTYVSTEFNLYNTKDEKLLWSGETESAYSKNFGKLAREYARALVTQLKKDKVIGTK
Ga0179592_100226501	3300020199	Vadose Zone Soil	VAFKRFSAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLVKQLKKDKVI
Ga0179592_100464332	3300020199	Vadose Zone Soil	WNMAWGNANATSSYVKEDTYVGTEFKLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK
Ga0179592_104811131	3300020199	Vadose Zone Soil	YYAFWPYWNMTYTQFSSTSSYMEENTVVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Ga0210407_108217393	3300020579	Soil	QVHATSSYLKESTIVNAEFNLYSTKDEKLLWSGETETVYSKDFGKLAKAYAKTLVKQLKKDKVVGTK
Ga0210403_112433122	3300020580	Soil	WNMAWGQVHTTSSYVKENTIVKAEFNLYSTKDEKLLWSGETETVYSKDFGKLAKAYAKTLVKQLKKDKVVGTK
Ga0210399_112069061	3300020581	Soil	RENTIVRAEFNLYNAKDEKLLWSGETDTVYSEDFDKLGKDYAKMLVKQLKRDKVIGHQ
Ga0210405_105386811	3300021171	Soil	TKQNIIVRAEFNLYNTKDEKLLWSGETDTVYSKDFQKLGKEYAEMLVKQLKKDKVIGKK
Ga0210405_109393312	3300021171	Soil	YSTPSYTQENTIVRAEFNLYSTKDEKLLWSGESDTVYSKDFDKLSKDYAKMLVKQLKRDKVIDKR
Ga0210391_109103561	3300021433	Soil	ATSSYLKESTIVNAEFNLYSTKDEKLLWSGETETVYSKDFGKLAKAYAKTLVKQLKKDKVVGTK
Ga0210402_112299162	3300021478	Soil	LAYRDLYPSSSYTKENVIVRVEFNLYSTKDEKLVWSGESDTLYSKDFEKLGKGCAESLVKQLKKDKVIRKN
Ga0242655_102308562	3300022532	Soil	WPYWETASSFHSTSSYTRENTIVRAEFNLYNAKDEKLLWSGETDTVYSEDFDKLGKDYAKMLVKQLKRDKVIGHQ
Ga0242654_102504371	3300022726	Soil	ATSSYVKEETYVSTEFNLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDKVIGTK
Ga0179589_105348541	3300024288	Vadose Zone Soil	FWPYWNMTYTQFSSTSSYMEENTVVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Ga0137417_11334622	3300024330	Vadose Zone Soil	VAFKRFSAKGSYLEKNTIVSAEFNLFRTNDETLLWSGETDTVYSENFGKLAKEYANTLVKQLKKDKVI
Ga0137417_11701672	3300024330	Vadose Zone Soil	FSTTSSYMEENTVVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Ga0207699_103005561	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TYSQFSTSSYMEENTIVSAEFNLYYTKDEKLLWSGETDTVYSKDFGKLGKEYASALIKQLKKDKVIGKK
Ga0209438_10068411	3300026285	Grasslands Soil	SSYMEENTVVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Ga0209240_10615351	3300026304	Grasslands Soil	VAFKRFSAKGSYLEKNTIVSAEFNLYRTNDETLLWSGETDTVYSENFGKLAKEYANTLLKQLKKDKVI
Ga0257178_10100162	3300026446	Soil	MEENTVVSAEFNLYYAKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Ga0257172_10148441	3300026482	Soil	MALKQFSAKGSYLEENTIVSAEFNLYRTNDETLLWSGETDTVYSENFEKLAKKYANTLVKQLKKDKVI
Ga0179587_101980992	3300026557	Vadose Zone Soil	EDTYVSTEFNLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK
Ga0179587_109525991	3300026557	Vadose Zone Soil	MPPPGYYAFWPYWNMTYTQFSSTSSYMEENTVVSAEFNLYNTKDEKLLWSGETDTVYSKDFGKLGKEYANALVKQLKKDKVIGKK
Ga0207775_1039843	3300026817	Tropical Forest Soil	SYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRK
Ga0207779_10102963	3300026928	Tropical Forest Soil	FVPTSSYTQENVIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0207722_10046733	3300027003	Tropical Forest Soil	SSYTQENVIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0207819_10139893	3300027024	Tropical Forest Soil	ENVIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0207776_10057961	3300027035	Tropical Forest Soil	EFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0209214_10272431	3300027071	Forest Soil	MVSAAFNLYHTKDETLLWSEETDTVYSEDFEKLGKEYARALVKQLKKDKVI
Ga0209004_10182181	3300027376	Forest Soil	YYAFWPYWNMAYGDFYPTSTTTRENIIVRVEFNLYSTKDERLVWSGETDTVYSKQFEKLGKEYAQTLVNQLKKDKVIRKK
Ga0207761_11005371	3300027516	Tropical Forest Soil	MASSQFYATSWSTQENIVVRVEVNFYNVKDEKLVWSGETDTVYSKDFEKLGKEYAKTLVGRLKKDKVISNK
Ga0209388_10065612	3300027655	Vadose Zone Soil	MAWGNANATSSYVKEDTYVGTEFKLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK
Ga0208990_10373601	3300027663	Forest Soil	KETKEVKNLAGPYVPPAGYYSFWPYWNMAWGQVYVTSSSVKEETYVSTEFNLYNTKDESLLWSGETESVYSKDFGKLAREYARALVKQLKSDKVIGTK
Ga0209588_10368003	3300027671	Vadose Zone Soil	VPPAAYSNFWPYWNMAWGNANATSSYVKEDTYVGTEFKLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDNVIGTK
Ga0209656_100146396	3300027812	Bog Forest Soil	ASAQFCPTNSYTTENTIVRAEFNLYNTKDEKLIWSGETDTVYSKDFQKLGKQYAEMLVKQLKKDKVIGKK
Ga0209656_101899083	3300027812	Bog Forest Soil	VRVEFNLYNTKDEKLVWSGESGAVNAKDFEKSDKEFAQTLVDRLRKDKVIRKK
Ga0209773_100607163	3300027829	Bog Forest Soil	PYWNMAYGDFYPTSSYTKENIIVRVEFNLFSTKDERLVWSGETDTIYSKDFEKMGKQYAQTLVNQLKKDKVIRKK
Ga0209067_106508071	3300027898	Watersheds	YWNMAYGQFYATSWTSQENIIVRVEVNFYNVKDEKLVWSGETDTIYSKDFEKLGKDYANTLVKQLKRDKVIGKK
Ga0209067_106895361	3300027898	Watersheds	YSFWPYWGMASAQFYPTSSYTKENIIVRAEFNLYNTKDEKLLWSGETDTVYSKDFQKLGKQYAEMLVKQLKKDKVIGKK
Ga0170824_1036283091	3300031231	Forest Soil	KEETYVSTEFNLYNTKDERLLWSGETETVYVKDFGKLAREYARALVKQLKKDKVIGNEMSVGN
Ga0170824_1053186481	3300031231	Forest Soil	TSSYVKEETYVSTEFNLYNLKDEKLLWSGETDTVYTKDFGKLAREYARALVKQLKKDKVIGTK
Ga0318560_107024382	3300031682	Soil	CNLYDTKSEKLVWNGESDTVYSKDFEKLGKNYAKSLIDQLKRDKVLRKKWAQPPRD
Ga0306917_100637021	3300031719	Soil	TFHATSSYTQENIIVRAEFNLYDAKNEKLVWSGETDTAYSKDFDKLGKDYAQLLVKRLKKDKVIGKK
Ga0306917_105331041	3300031719	Soil	WNMAYGNFIPTSSYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKKK
Ga0306918_110314471	3300031744	Soil	VRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIKKK
Ga0306918_114337861	3300031744	Soil	AWSQVHTTTSYLQEDTVIRAEFNLYNTKDEKLLWSGETDTVYTKNFSKLGKEYARALVKQLKKDKVIKTK
Ga0307477_107838002	3300031753	Hardwood Forest Soil	YWETASSFHSTSSYTRENTIVRAEFNLYNAKDEKLLWSGETDTVYSEDFDKLGKDYAKMLVKQLKRDKVIGHQ
Ga0307475_100581071	3300031754	Hardwood Forest Soil	PYWDMAFKQFSAKGSYLKENTMVSAEFNLYSTKDETLLWSGETDTVYSKNFEKLGKEYASALVKQLKKDQVI
Ga0307475_105360251	3300031754	Hardwood Forest Soil	YATSSYMKEDTYVSTEFNLYNIKDEKLLWSGETDTVYTKDFGKLAREYAKALVKQLRKDKVIGTK
Ga0307475_106774512	3300031754	Hardwood Forest Soil	ESYVSTEFNLYNTKDEKLLWSGETETVYLEDFGKLAREYARALVKQLKKDKVIGTK
Ga0318546_111052491	3300031771	Soil	VEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0318550_104145271	3300031797	Soil	GTFVPTSSYTKENVIVRVECTLYDTKSEKLVWNGESDTVYSKDFEKLGKNYAKSLIDQLKRDKVLRKKWPQPPSD
Ga0318568_110570572	3300031819	Soil	SYTQENIIVRVEFNLYNVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKK
Ga0310917_102738811	3300031833	Soil	SSYTKENVIVRVECNLYDTKSEKLVWNGESDTVYSKDFEKLGKNYAKSLIDQLKRDKVLRKKWPQPPSD
Ga0306925_101141354	3300031890	Soil	SYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKRDGVIKK
Ga0306923_109230112	3300031910	Soil	IVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDRVIRKK
Ga0306923_115462531	3300031910	Soil	YWNTAYGEFYPTSSYTKENIVVRVEFNLYNTKDEKLVWSGETDTVYSKDFEKLGKDYAKTLVNQLKKDKVIGKK
Ga0310912_103179471	3300031941	Soil	VSAEFNLYSTKDETLLWSGETDSVYSKNFEKLGKEYASALVKQLKKDKVI
Ga0310916_100670193	3300031942	Soil	WPYWNMAYGNFVPTSSYTQENIIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDAVIKKK
Ga0310909_104388383	3300031947	Soil	VRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0307479_103475062	3300031962	Hardwood Forest Soil	QVYVTSSNVKEETYVSTEFNLYNTKDEKLLWSGETETVYLKDFGKLAREYARALVMQLKKDKVIGTK
Ga0318533_105163781	3300032059	Soil	FYPTSSYTKENIVVRVEFNLYNTKDEKLVWSGETDTVYSKDFEKLGKDYAKTLVNQLKKDKVIGKK
Ga0318510_102940262	3300032064	Soil	IVSAEFNLYSTKDETLLWSGETDSVYSKNFEKLGKEYASALVKQLKKDKVI
Ga0306924_116352492	3300032076	Soil	YGNFVPTSSYTQENVIVRVEFNLYYVKDEKLVWSGESDTVYSKDFEKLGRDYAKTLVNQLKKDGVIRKK
Ga0307470_113222171	3300032174	Hardwood Forest Soil	IVSAEFNLYRTNDETLLWSGETDSVYSENFEKLAKEYADMLVKQLKKDRVI
Ga0307471_1000093076	3300032180	Hardwood Forest Soil	MAFKQFSAKGTYLKENTIVSAEFNLYRTNDETLLWSGETDSVYSENFEKLAKEYADMLVKQLKKDRVI
Ga0307471_1010779041	3300032180	Hardwood Forest Soil	SAQGSYLKENTIVSAEFNLYRTADETLLWSGETDTVYSKNFEKLAKEYANTLVKQLKKDKVISKG
Ga0307472_10000015219	3300032205	Hardwood Forest Soil	VRVEVNLYNTKDEKLIWSGETDTVYSKDFAKLGKDYAKSLVKQLKKDGVVGKK
Ga0307472_1005446102	3300032205	Hardwood Forest Soil	SSSSPRRGSYLKENTMVSAEFNLYHTKDETLLWSGETDTVYSENFEKLGKEYARALVKQLKKDKVI
Ga0307472_1008944781	3300032205	Hardwood Forest Soil	AFKQYSAQGSYLKENTIVSAEFNLYRTADETLLWSGETDTVYSKNFEKLAKEYANTLVKQLKKDKVISKG
Ga0335082_102620783	3300032782	Soil	GLLRVLAVLEDLYPTSSYTKENVVVRVEVNLYDTKNEKLVWSGETDTVYSKDFEKLGKDYAKTIVGQLRKDKVLRKK
Ga0335069_105772811	3300032893	Soil	QFYATSWSTEENIVIRVEVNMYNVKDEKLVWSGETDTVYSKDFEKLGKDYANTLVKQLKRDKVIRKN
Ga0335071_103500963	3300032897	Soil	YGQFYATSWSTQENIIVRVEVNFYNVKDEKLVWSGETDTVYSKDFEKLGKDYAKTMVNRLKKDKVIGKK
Ga0335076_107329831	3300032955	Soil	DLYPTSSYTKENVVVRVEVNLYNTKDEKLVWSGETDTVYSKDFEKLGKSYAKTIVGQLKKDKVISKK
Ga0335084_100454496	3300033004	Soil	YGQFYATSWSTQENIIVRVEVNFYNVRDEKLVWSGETDTVYSKDFEKLGKEYAKTLVKQLKRDKVIGQK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056424

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences