Metagenome Family F056233

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056233
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	88 residues
Representative Sequence	MEPRDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Number of Associated Samples	64
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.03 %
% of genes near scaffold ends (potentially truncated)	32.12 %
% of genes from short scaffolds (< 2000 bps)	91.24 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (87.591 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.117 % of family members)
Environment Ontology (ENVO)	Unclassified (60.584 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.62% β-sheet: 0.00% Coil/Unstructured: 45.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04404	ERF	9.49
PF01381	HTH_3	1.46
PF03237	Terminase_6N	1.46
PF13005	zf-IS66	0.73
PF00296	Bac_luciferase	0.73
PF09588	YqaJ	0.73
PF04138	GtrA	0.73
PF00005	ABC_tran	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
All Organisms	root	All Organisms	12.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
cellular organisms	root	All Organisms → cellular organisms	12.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.57 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.19 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	1.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.19 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	1.46 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.73 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.19 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	1.46 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.73 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.19 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.46 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	0.73 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	87.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.19 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1.46 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.73 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XYN6U	Not Available	504	Open in IMG/M
3300005332\|Ga0066388_100959968	Not Available	1424	Open in IMG/M
3300005332\|Ga0066388_102809061	Not Available	889	Open in IMG/M
3300005332\|Ga0066388_105074813	Not Available	669	Open in IMG/M
3300005332\|Ga0066388_105196305	Not Available	661	Open in IMG/M
3300005764\|Ga0066903_103632314	Not Available	830	Open in IMG/M
3300005764\|Ga0066903_104932067	Not Available	708	Open in IMG/M
3300005764\|Ga0066903_105995876	Not Available	637	Open in IMG/M
3300005764\|Ga0066903_106818190	Not Available	593	Open in IMG/M
3300010046\|Ga0126384_10295165	Not Available	1330	Open in IMG/M
3300010046\|Ga0126384_11206738	Not Available	698	Open in IMG/M
3300010048\|Ga0126373_10419784	Not Available	1366	Open in IMG/M
3300010048\|Ga0126373_10777149	Not Available	1019	Open in IMG/M
3300010048\|Ga0126373_11057264	Not Available	878	Open in IMG/M
3300010162\|Ga0131853_10865698	Not Available	716	Open in IMG/M
3300010358\|Ga0126370_10572775	Not Available	969	Open in IMG/M
3300010359\|Ga0126376_11362007	Not Available	732	Open in IMG/M
3300010360\|Ga0126372_10775181	Not Available	947	Open in IMG/M
3300010361\|Ga0126378_10170058	All Organisms → cellular organisms → Bacteria → Proteobacteria	2237	Open in IMG/M
3300010361\|Ga0126378_10447329	Not Available	1406	Open in IMG/M
3300010361\|Ga0126378_11854453	Not Available	686	Open in IMG/M
3300010361\|Ga0126378_13441625	Not Available	502	Open in IMG/M
3300010366\|Ga0126379_10672666	Not Available	1127	Open in IMG/M
3300010366\|Ga0126379_10720051	Not Available	1093	Open in IMG/M
3300010366\|Ga0126379_11288475	Not Available	837	Open in IMG/M
3300010376\|Ga0126381_100555124	Not Available	1628	Open in IMG/M
3300010376\|Ga0126381_100924632	Not Available	1256	Open in IMG/M
3300010376\|Ga0126381_101384779	Not Available	1017	Open in IMG/M
3300010376\|Ga0126381_102025140	Not Available	830	Open in IMG/M
3300010376\|Ga0126381_102444827	Not Available	749	Open in IMG/M
3300010376\|Ga0126381_102711389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	708	Open in IMG/M
3300010376\|Ga0126381_103541546	Not Available	613	Open in IMG/M
3300010398\|Ga0126383_11438335	Not Available	779	Open in IMG/M
3300012971\|Ga0126369_11186181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	853	Open in IMG/M
3300012971\|Ga0126369_11817912	Not Available	698	Open in IMG/M
3300012971\|Ga0126369_12096239	Not Available	653	Open in IMG/M
3300012971\|Ga0126369_13308644	Not Available	528	Open in IMG/M
3300016270\|Ga0182036_10369371	Not Available	1110	Open in IMG/M
3300016294\|Ga0182041_11025742	Not Available	747	Open in IMG/M
3300016319\|Ga0182033_10158513	Not Available	1756	Open in IMG/M
3300016319\|Ga0182033_10922764	Not Available	774	Open in IMG/M
3300016319\|Ga0182033_11358196	Not Available	639	Open in IMG/M
3300016341\|Ga0182035_10571922	Not Available	973	Open in IMG/M
3300016341\|Ga0182035_10934496	Not Available	766	Open in IMG/M
3300016341\|Ga0182035_11352679	Not Available	638	Open in IMG/M
3300016341\|Ga0182035_11985129	Not Available	528	Open in IMG/M
3300016357\|Ga0182032_10042903	All Organisms → cellular organisms → Bacteria → Proteobacteria	2876	Open in IMG/M
3300016357\|Ga0182032_10134933	Not Available	1803	Open in IMG/M
3300016357\|Ga0182032_10200662	Not Available	1518	Open in IMG/M
3300016357\|Ga0182032_11051468	Not Available	697	Open in IMG/M
3300016422\|Ga0182039_11523378	Not Available	609	Open in IMG/M
3300016445\|Ga0182038_10321722	Not Available	1272	Open in IMG/M
3300021560\|Ga0126371_10040492	All Organisms → cellular organisms → Bacteria → Proteobacteria	4413	Open in IMG/M
3300021560\|Ga0126371_10216046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2019	Open in IMG/M
3300021560\|Ga0126371_10443749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1443	Open in IMG/M
3300021560\|Ga0126371_10480114	Not Available	1390	Open in IMG/M
3300021560\|Ga0126371_10485823	Not Available	1382	Open in IMG/M
3300021560\|Ga0126371_10579205	Not Available	1271	Open in IMG/M
3300021560\|Ga0126371_10642588	Not Available	1210	Open in IMG/M
3300021560\|Ga0126371_10762217	Not Available	1115	Open in IMG/M
3300021560\|Ga0126371_10921479	Not Available	1017	Open in IMG/M
3300021560\|Ga0126371_11471503	Not Available	810	Open in IMG/M
3300021560\|Ga0126371_11724317	Not Available	750	Open in IMG/M
3300021560\|Ga0126371_12163093	Not Available	671	Open in IMG/M
3300021560\|Ga0126371_12370838	Not Available	642	Open in IMG/M
3300021560\|Ga0126371_12427578	Not Available	634	Open in IMG/M
3300021560\|Ga0126371_12507735	Not Available	624	Open in IMG/M
3300021560\|Ga0126371_13305001	Not Available	545	Open in IMG/M
3300021560\|Ga0126371_13827120	Not Available	507	Open in IMG/M
3300031546\|Ga0318538_10362457	Not Available	783	Open in IMG/M
3300031561\|Ga0318528_10569770	Not Available	608	Open in IMG/M
3300031564\|Ga0318573_10212099	Not Available	1028	Open in IMG/M
3300031573\|Ga0310915_10124502	Not Available	1762	Open in IMG/M
3300031573\|Ga0310915_10347641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1051	Open in IMG/M
3300031573\|Ga0310915_10497226	Not Available	866	Open in IMG/M
3300031573\|Ga0310915_10634856	Not Available	756	Open in IMG/M
3300031573\|Ga0310915_10676615	Not Available	729	Open in IMG/M
3300031573\|Ga0310915_10723304	Not Available	702	Open in IMG/M
3300031573\|Ga0310915_10978137	Not Available	591	Open in IMG/M
3300031680\|Ga0318574_10352372	Not Available	858	Open in IMG/M
3300031681\|Ga0318572_10506328	Not Available	719	Open in IMG/M
3300031682\|Ga0318560_10171601	Not Available	1153	Open in IMG/M
3300031713\|Ga0318496_10243563	Not Available	991	Open in IMG/M
3300031719\|Ga0306917_10019570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4147	Open in IMG/M
3300031719\|Ga0306917_10069820	Not Available	2431	Open in IMG/M
3300031719\|Ga0306917_10099093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2087	Open in IMG/M
3300031719\|Ga0306917_11263581	Not Available	572	Open in IMG/M
3300031736\|Ga0318501_10774347	Not Available	531	Open in IMG/M
3300031744\|Ga0306918_10500271	Not Available	952	Open in IMG/M
3300031744\|Ga0306918_10676874	Not Available	807	Open in IMG/M
3300031763\|Ga0318537_10148503	Not Available	873	Open in IMG/M
3300031763\|Ga0318537_10226399	Not Available	695	Open in IMG/M
3300031764\|Ga0318535_10023202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2416	Open in IMG/M
3300031771\|Ga0318546_10734054	Not Available	695	Open in IMG/M
3300031777\|Ga0318543_10455991	Not Available	573	Open in IMG/M
3300031781\|Ga0318547_10103515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1629	Open in IMG/M
3300031781\|Ga0318547_10264322	Not Available	1040	Open in IMG/M
3300031781\|Ga0318547_10698042	Not Available	631	Open in IMG/M
3300031793\|Ga0318548_10288263	Not Available	807	Open in IMG/M
3300031796\|Ga0318576_10283115	Not Available	783	Open in IMG/M
3300031819\|Ga0318568_10815263	Not Available	579	Open in IMG/M
3300031833\|Ga0310917_10139794	Not Available	1591	Open in IMG/M
3300031835\|Ga0318517_10507483	Not Available	543	Open in IMG/M
3300031879\|Ga0306919_11132676	Not Available	596	Open in IMG/M
3300031880\|Ga0318544_10088606	Not Available	1158	Open in IMG/M
3300031890\|Ga0306925_10537032	Not Available	1241	Open in IMG/M
3300031890\|Ga0306925_10714729	Not Available	1047	Open in IMG/M
3300031890\|Ga0306925_10836220	Not Available	952	Open in IMG/M
3300031890\|Ga0306925_10841886	Not Available	948	Open in IMG/M
3300031897\|Ga0318520_10507776	Not Available	745	Open in IMG/M
3300031910\|Ga0306923_10451137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300031910\|Ga0306923_10545858	Not Available	1307	Open in IMG/M
3300031910\|Ga0306923_10655466	Not Available	1173	Open in IMG/M
3300031910\|Ga0306923_10994986	Not Available	911	Open in IMG/M
3300031912\|Ga0306921_10048733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4803	Open in IMG/M
3300031945\|Ga0310913_10522284	Not Available	843	Open in IMG/M
3300031945\|Ga0310913_10712695	Not Available	709	Open in IMG/M
3300031945\|Ga0310913_11254901	Not Available	515	Open in IMG/M
3300031946\|Ga0310910_11106920	Not Available	617	Open in IMG/M
3300031946\|Ga0310910_11185182	Not Available	593	Open in IMG/M
3300031954\|Ga0306926_10590022	Not Available	1358	Open in IMG/M
3300031954\|Ga0306926_10943969	Not Available	1030	Open in IMG/M
3300032001\|Ga0306922_10090534	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300032001\|Ga0306922_11909922	Not Available	581	Open in IMG/M
3300032035\|Ga0310911_10352259	Not Available	850	Open in IMG/M
3300032042\|Ga0318545_10044289	Not Available	1493	Open in IMG/M
3300032044\|Ga0318558_10603253	Not Available	549	Open in IMG/M
3300032051\|Ga0318532_10185254	Not Available	739	Open in IMG/M
3300032052\|Ga0318506_10462316	Not Available	563	Open in IMG/M
3300032068\|Ga0318553_10291093	Not Available	854	Open in IMG/M
3300032076\|Ga0306924_10038172	All Organisms → cellular organisms → Bacteria → Proteobacteria	5257	Open in IMG/M
3300032091\|Ga0318577_10383403	Not Available	672	Open in IMG/M
3300032094\|Ga0318540_10501741	Not Available	586	Open in IMG/M
3300032261\|Ga0306920_100495457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1813	Open in IMG/M
3300032261\|Ga0306920_101022474	Not Available	1202	Open in IMG/M
3300032261\|Ga0306920_102782934	Not Available	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.27%
Host-Associated	Host-Associated	0.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.27%
Arthropoda	Host-Associated → Arthropoda	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.27%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.43%
Loam	Environmental → Terrestrial → Soil → Loam	5.84%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.73%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	32.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.84%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.73%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_00923120	2070309004	Green-Waste Compost	MQSRGGGEVSGRPSGHLSARQTRDAISSLNEAWLHTLDEYLIDAPLSQVILPVMRACFFGGATYAVLLAQRGHGNQAVAD
Ga0066388_1009599681	3300005332	Tropical Forest Soil	MEARGGGEVSGRPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLTQVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS*
Ga0066388_1028090611	3300005332	Tropical Forest Soil	MEPRDCGEVSGRPYGHLSSRKTRDAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEEPRS*
Ga0066388_1050748132	3300005332	Tropical Forest Soil	MEPRDDGEVSGRPSAHLNSGQARDAIFSLNEAWLHTLDEYVTDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS*
Ga0066388_1051963052	3300005332	Tropical Forest Soil	DDGEVSGRPSAHLNSGQARDAVFSLNEAWLHTLDEYVMDTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS*
Ga0066903_1036323141	3300005764	Tropical Forest Soil	MGSRRDDKVSMSPAGRFRSTQTQTAISSLNEAWLYTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGSQVVADIAGFLTEQPRS*
Ga0066903_1049320672	3300005764	Tropical Forest Soil	MEPRDSGEVSGRPSRHLSSRQTRDAISSLNEAWLHTLDEYVADTPLSQVILPVMRACFFGGATYAVLLAQRGHGSQVVADIAGFLTEQPRS*
Ga0066903_1059958761	3300005764	Tropical Forest Soil	MEPSDSGEVSWPSSGHTSSGRITCAISSLNEAWLHTLDEYVIDTPLSEVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS*
Ga0066903_1068181901	3300005764	Tropical Forest Soil	MEPRDDGEVSGRPSGRLSSRQSRDAILSLNEAWLHTLEEYVIDTPLTQVTLPVMRACFFGGATYAVLLAQRGQGNQVAADIVGFLTEQPRS*
Ga0126384_102951652	3300010046	Tropical Forest Soil	MEARGGGEVSGRPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHRSQVVADIAGFLTEQPRS*
Ga0126384_112067381	3300010046	Tropical Forest Soil	MEPRHRGEVSGRPSGHLNSRLTRDAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLLHKGHGDQVAADIAGFITEQSRS*
Ga0126373_104197842	3300010048	Tropical Forest Soil	MEPCDDGEASGRPSGRLSSRQSRDAILSLNEAWLHTLDEYVIDTPLTQVTLPVMRACFFGGATYAVLLAQRGQGNQVAADIVGFLTEQPRS*
Ga0126373_107771491	3300010048	Tropical Forest Soil	MEPRDSGEVSGFPYGHLSSRQTRDAISSLNEASLHTLDEYVIDTPPSQVILPVMRACFFGGATYAVLLAQRGHGILTEQPRS*
Ga0126373_110572641	3300010048	Tropical Forest Soil	MELSDGGEVSGRPSGHLSSRQTRDAISSLNEAWLHLDEYVIDTPLSQVIFPVMRACFLGGATYAVLLAQRGHGNQVASDIVGFLTGQPRS*
Ga0131853_108656981	3300010162	Termite Gut	MELRDDGEVSWRPSGHPSSRQTRDAISSLNEAWLHTLDEYVTNTPLSQVILPLMRACFFGGATYAVLLAQRGHANQVISDIAGFLTEQPRS*
Ga0126370_105727752	3300010358	Tropical Forest Soil	MSPAGRFRSTQTQTAISSLNEAWLYILDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVLSDIAGFLTEQPRS*
Ga0126376_113620071	3300010359	Tropical Forest Soil	MEPHDDGEVSGRPSGRLSSRQTRPAISSLNEAWLHTIDEDAVDTPLSQIILPVICACFFGGATYSVLLAQRGHGNQVVFDIAGFLAEQPW
Ga0126372_107751812	3300010360	Tropical Forest Soil	MEPRDCGEVSGRPYGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPMMRACFFGGATYAVLLAQRGHGNQIVSDIAGFLTEEPRS*
Ga0126378_101700582	3300010361	Tropical Forest Soil	MFIREINYGISSSRLSSWRPPGNLSSRETRGAISSLNEAWLHTLDEYVIDTPLSQVILPVMRVCFFGGATYAVLLAQRGQGNQVAADIVGFLTEQPRS*
Ga0126378_104473292	3300010361	Tropical Forest Soil	MEPHHRGEVSGRPSGHLNSRLTRDAISSLNEAWLRTLDEYVIDTPLSQVILPVMRACFFDGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS*
Ga0126378_118544532	3300010361	Tropical Forest Soil	MGPPDDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPLSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS*
Ga0126378_134416251	3300010361	Tropical Forest Soil	METYDGGEVSGHPYGHLSSRQTRDAIFSLNEAWLYTLDEYVAHTPLSRVILPVMRACVFGGATYAVLLAQRGHGNQVVADIA
Ga0126379_106726662	3300010366	Tropical Forest Soil	MDPRDRGEVSRRPYGHLSTRQTRGAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS*
Ga0126379_107200512	3300010366	Tropical Forest Soil	MEPSDDGEVSGRPSGHLSSRQSRDAILSLNEAWLHTLDEYVIDTPLTQVTLPVMRACFFGGATYAVLLAQRGRGNQVAADIVGFLTEQPRS*
Ga0126379_112884751	3300010366	Tropical Forest Soil	MGARREDEVSRPPAGRLRSTQTHTAISSLNEAWLHTLDEYAADTPLSQVILPLTRACFFGGATCAVLLLHKGHGDQVAADIAGFITEQSRS*
Ga0126381_1005551242	3300010376	Tropical Forest Soil	MGARREDEVSRPPAGRLRSTQTHAAISSLNEAWLHTLDEYAADTPLSHVILPLMRACFFGGATYAILLLHKGHGDQVAADIAGFITEQSRS*
Ga0126381_1009246322	3300010376	Tropical Forest Soil	MESRDGGEVSGHHSGRLSSRQTRPAISSLNEAWLHTIDEDAVDTPLSQIILPVICACFFGGATYSVLLAQRGHGNQVVFDIAGFLAEQPWS*
Ga0126381_1013847792	3300010376	Tropical Forest Soil	MEPRDGEVSGYPSRHLSSTQNRNAISSLNEAWLHTLDEYVINTPMSQVILPVMRACFFGEATYAVLLAQRGHGNQVVADIAGFLTEQPRS*
Ga0126381_1020251401	3300010376	Tropical Forest Soil	ETMELRDGGEVSGRPSGHLSSRQTRDAISSLNEAWLHLDEYVIDTPLSQVIFPVMRACFLGGATYAVLLAQRGHGNQVASDIVGFLTGQPRS*
Ga0126381_1024448272	3300010376	Tropical Forest Soil	MESRHRREVSGRPYGHLISRQTRDAISSLNEAWLHTRDEYVIDTPLSQVILLLMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPGS*
Ga0126381_1027113892	3300010376	Tropical Forest Soil	MEPRDNRKVSGRPSVHLSSRQNRDAISSLNEAWLHTLDEYVATPPLSQVILRLMRACFFGGAIYAVLLLQKGRGKQVSCDIAGFLTEQPRP*
Ga0126381_1035415461	3300010376	Tropical Forest Soil	MEPRDSGEVSGHPYGHPSLRQTRDAISSLNEAWLHTLGEYVVDTPLSRVILPVMRACFFGGATYAVLLAQRDHGNRVVADIAGFLTEQPRS*
Ga0126383_114383351	3300010398	Tropical Forest Soil	MEPRDDGEVSGRPSGHFNSRQSRDAILSLNEAWLHTLDEYVIDTPLTQVILPVMRACFFGGATYAVLLAQRGQGNQVA
Ga0126369_111861812	3300012971	Tropical Forest Soil	MEPRHHGKVSGRPYEHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQQRL*
Ga0126369_118179122	3300012971	Tropical Forest Soil	SGHLSSRQSRDAISSLKEAWLHTLDAYVIDTPLTQVILPVMRACFFGGATYAVLLAQRGQGNQVAADIVGFLTEQPRS*
Ga0126369_120962391	3300012971	Tropical Forest Soil	MEPRDSGEVSGFPYGHLSSRQTRDAISSLNEASLHTLDEYVIDTPPSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQP
Ga0126369_133086441	3300012971	Tropical Forest Soil	KYVFLIHLSSRQTRNAISSLNEGWLHTLDEYVIDTPLSQVILPLMRACFFGRATYAVLLAQRGHGNRVVSDIAGFLTEHPGS*
Ga0182036_103693712	3300016270	Soil	MEQRDSREVSGRPSGHLSSRQNRDAISSLNEAWLHTLDEYVATTPLSQVILRLMRACFFGGASYAVLLLQKGHGNQVACDIAGFLTEQPRS
Ga0182041_110257421	3300016294	Soil	MGDRRADEVSRPPAGDLSSKQTIGSIFSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLLQKGYGNQVACDI
Ga0182033_101585132	3300016319	Soil	MGDRRADEVSRPPAGDLGSKQTIGSISSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLLQKGYGNQVACDIVGFLTEQPRS
Ga0182033_109227641	3300016319	Soil	MEPRGSGEVSGRPSGPLSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILTVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQP
Ga0182033_113581961	3300016319	Soil	MGPPDDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPLSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIA
Ga0182035_105719222	3300016341	Soil	MKYRGGGEVSGRPSGHLSARQTRDAISSLNEAWLHTLDEYVIDKPLSKVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS
Ga0182035_109344962	3300016341	Soil	MEPRDGGEVSGRPSVHRSSRQTRDAILSLNEAWIHTIDEYVVDMPLSQVILPVMRTCFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0182035_113526791	3300016341	Soil	MEPRGSGEVSGRPSGPLSSRQTRDAILSLNDAWLHTLDEYVIDTPLSQVILPVMRACFFGGAAYAVLLAQRGHGNQVV
Ga0182035_119851292	3300016341	Soil	MEHHHRFEVSGRPYGHLSSRETRGAISSLNEAWLHTLDEYVIDTPLSQVILPMMRACFFGGATYAVLLAQRGHDNQVLSDIAGFLTEQPRSCPQKPDARAI
Ga0182032_100429032	3300016357	Soil	MQYRGGGEVIWRPSGHLSARQTRDAISSLNEAWLHTLDEYVIDKPLSKVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS
Ga0182032_101349334	3300016357	Soil	MEPRGSGEVSGRPSGPLSSRQTRDAILSLNEAWLCTLDEYVIDTSLSEVILPVMRACFFGGATYAVLLAQRGHGDRVVADIAGFLTEQPRL
Ga0182032_102006622	3300016357	Soil	MEPRDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTE
Ga0182032_110514681	3300016357	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVVDTPLSQIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPGS
Ga0182039_115233781	3300016422	Soil	IRMAARRENEVSRPSPGDLCSKQTIGSISSLKQAWFHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLLQKGYGNQVACDIAGFLTEQPRS
Ga0182038_103217222	3300016445	Soil	EGETMEPRDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS
Ga0126371_100404925	3300021560	Tropical Forest Soil	MGPPDDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPPSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS
Ga0126371_102160462	3300021560	Tropical Forest Soil	MEARGGGEVSGRPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLTQVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS
Ga0126371_104437492	3300021560	Tropical Forest Soil	MKARREDEVSRPPVGTPGSKQTTATISSLNEAWLRTLDEYVTDTPLNQVILPVMRACFFGGATYAVLLLRKGHADRVACDIAGFLTELSRS
Ga0126371_104801141	3300021560	Tropical Forest Soil	MEPRDSGEVSVRPYGHLSSRQTRDTISSLNEAWLHTLDEYVINPPLSQVILPMIRACFFCGAPYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0126371_104858232	3300021560	Tropical Forest Soil	MEPRDGGEVSGHPFGHLSSRQTRGAISSLNETWLHTLNEYVIDTPLSQVILLLMRACFFGGATYAVLLAQRGHGDRVASDIAGFLTEQPRS
Ga0126371_105792051	3300021560	Tropical Forest Soil	MEPRDSGEVSGFPYGHLSSRQTRDAISSLNEASLHTLDEYVIDTPPSQVILPVMRACFFGGATYAVLLAQRGHGILTEQPRS
Ga0126371_106425882	3300021560	Tropical Forest Soil	MEPRDCGEVSGRPYGHLSSRKTRDAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEEPRS
Ga0126371_107622172	3300021560	Tropical Forest Soil	MGARREDEVSRPPAGRLRSTQTHAAISSLNEAWLHTLDEYAADTPLSHVILPLMRACFFGGATYGILLLHKGHGDQVAADIAGFITEQSRS
Ga0126371_109214792	3300021560	Tropical Forest Soil	METYDGGEVSGHPYGHLSSRQTRDAIFSLNEAWLYTLDEYVAHTPLSRVILPVMRACVFGGATYAVLLAQRGHGNQVVADIASFLTEQPRS
Ga0126371_114715032	3300021560	Tropical Forest Soil	MEPHHRGEVSGRPSGHLNSRLTRDAISSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFDGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0126371_117243172	3300021560	Tropical Forest Soil	MEHRHRGEVSWRPCGHLSSRETRDAISSLNEAWLHTLDKYVIGTLLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0126371_121630932	3300021560	Tropical Forest Soil	MEPRDGDEVSGRPSGHLSSRQTRDAILSLNDAWLHTLDEYVVDTPLSRIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPGP
Ga0126371_123708381	3300021560	Tropical Forest Soil	MESRDGGEVSGHHSGRLSSRQTRPAISSLNEAWLHTIDEDAVDTPLSQIILPVICACFFGGATYSVLLAQRGHGNQVVFDIAGFLAEQPWS
Ga0126371_124275781	3300021560	Tropical Forest Soil	MEPRDSGEVSGRPSGHLSPRQTRDAISSLNEAWLNTLDEYVIDTPLSQVIFPVMRACFFGGPTYAVLLAQRGHG
Ga0126371_125077352	3300021560	Tropical Forest Soil	MGARREDEVSRPPAGRLRSTQTHTAISSLNEAWLHTLDEYAADTPLSQVILPLMRACFFGGATYAVLLLHKGHGDQVAADIAGFITEQSRS
Ga0126371_133050011	3300021560	Tropical Forest Soil	MEPRDDGEVSGRPSGRLSSRQSRDAILSLNEAWLHTLDEYVIDTPLTQVTLPVMRACFFGGATYAVLLAQRGQGNQVAADI
Ga0126371_138271202	3300021560	Tropical Forest Soil	MEPSDSGEVSWPSSGHTSSGRITCAISSLNEAWLHTLDEYVIDTPLSEVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0318538_103624571	3300031546	Soil	MGDRRADEVSRPPAGDLGSKQTIGSIFSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLVQKGYGNQVACDIAGFLTEDPRS
Ga0318528_105697701	3300031561	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRL
Ga0318573_102120992	3300031564	Soil	MEPRDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS
Ga0310915_101245021	3300031573	Soil	MGPPDDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPLSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIAS
Ga0310915_103476411	3300031573	Soil	MEPRDSREVSGRPSGHLSSRQNRDAISSLNEAWLHTLDEYVATTPLSQVILRLMRACFFGGASYAVLLLQKGHGNQVACDIAGFLTEQPRS
Ga0310915_104972261	3300031573	Soil	MGDRRADEVSRPPAGDLGSKQTIGSIFSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLVQKGYGNQVACDIADFLTEDPRS
Ga0310915_106348562	3300031573	Soil	MEHHHRFEVSGRPYGHLSSRETRGAISSLNEAWLHTLDEYVIDTPLSQVILPVMRVFFFGGATYTVLLAQRGHGNQVVTDIAVFLTEQPRS
Ga0310915_106766152	3300031573	Soil	MGAHREDEVSRPPVAGLRSTQNPIAISSLNEAWLHTLDEYVADTPLSQVILPLMRACFFDGATYAVLLAQKGHGNQVAADITGFITEQPRS
Ga0310915_107233041	3300031573	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVADIAGFLTEQPRS
Ga0310915_109781372	3300031573	Soil	MEPRDRGEVSGRPSGPLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILTVMRACFFGGATYAVLLAQRGHGNQVVSDIAG
Ga0318574_103523721	3300031680	Soil	MGAHREDEVSRPPAGGLRSTQNPIAISSLNEAWLHTLDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0318572_105063283	3300031681	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRTCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0318560_101716011	3300031682	Soil	MGDRRADEVSRPPAGDLGSKQTIGSISSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLVQKGYGNQVACDIAGFLTEDPRS
Ga0318496_102435631	3300031713	Soil	PSSRQTRDAILSLNEAWLHTLDEYVVDTPLIQIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRL
Ga0306917_100195702	3300031719	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDMPLSQVILPAMRACFFGGAAYAVLLAQRGHGNQVVTDIAGFLTEQLGS
Ga0306917_100698201	3300031719	Soil	MGPPDDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPLSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPWS
Ga0306917_100990934	3300031719	Soil	MQYRGGGEVSGRPSGHLSARQTRDAISSLNEAWLHTLDEYVIDKPLSKVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS
Ga0306917_112635811	3300031719	Soil	DRRADEVSRPPAGDLGSKQTIGSISSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLVQKGYGNQVACDIAGFLTEDPRS
Ga0318501_107743472	3300031736	Soil	SMGAHREDEVSRPPVAGLRSTQNPIAISSLNEAWLHTVDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0306918_105002712	3300031744	Soil	MEPRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGAAYAVLLAQRGHG
Ga0306918_106768741	3300031744	Soil	MGPPDDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPLSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS
Ga0318537_101485031	3300031763	Soil	MGAHREDEVSRPPAGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0318537_102263991	3300031763	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDMPLSQVILPAMRACFFGGAAYAVLLAQRGHGNQVVTDIAGFLTEQL
Ga0318535_100232023	3300031764	Soil	MGAHREDEVSRPPAGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRL
Ga0318554_104150271	3300031765	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVA
Ga0318546_107340541	3300031771	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0318543_104559912	3300031777	Soil	RDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS
Ga0318547_101035151	3300031781	Soil	DDDEVSWRPAGHLGSRQTRDTISSLNEAWAHTLDEYAIDTPLSQIILPMMRACFFGGATYAVLLAQRGHGNQVVSDIASFLTEQPRS
Ga0318547_102643222	3300031781	Soil	MGDRRADEVSRPPAGDLGSKQTIGSIFSLNEAWVHTLDEYVATTPLSQVILPLMRACFFGGATYAVLLVQKGYGNQVACDIADFLTED
Ga0318547_106980421	3300031781	Soil	GHLSSRETRGAISSLNEAWLHTLDEYVIDTPLSQVILPVMRVFFFGGATYTVLLAQRGHGNQVVTDIAVFLTEQPRS
Ga0318548_102882631	3300031793	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVADIAGFLTEQ
Ga0318576_102831152	3300031796	Soil	MEPRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVADIAGFLTEQPRS
Ga0318568_108152631	3300031819	Soil	MGAHREDEVSRPPAGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0310917_101397942	3300031833	Soil	MQYRGGGEVSGRPSGHLSPRQNRDAISSLNEAWLHTLDEYVATTPLSQVILRLMRACFFGGASYAVLLLQKGHGNQVACDIAGFLTEQPRS
Ga0318517_105074831	3300031835	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDMPLSQVILPAMRACFFGGAAYAVLLAQRGHG
Ga0306919_111326761	3300031879	Soil	EVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVVDTPLIQIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPWS
Ga0318544_100886062	3300031880	Soil	MEPRGSGEVSGRPSGLLSSRQTRDAILSLNEAWLHTLDEYVIDMPLSQVILPVMRACFFGGATYAVLLAQRGH
Ga0306925_105370321	3300031890	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLNEAWLHTLDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0306925_107147292	3300031890	Soil	MEPRDRGEVSGRPSGPLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILTVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPGS
Ga0306925_108362202	3300031890	Soil	YRGGGEVSGRPSGHLSARQTRDAISSLNEAWLHTLDEYVIDKPLSKVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS
Ga0306925_108418862	3300031890	Soil	MEPRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVADIAGFLTEQPRS
Ga0318520_105077761	3300031897	Soil	MELSDGGEVSLPSSDHTSSGQITDAISSLNEAWLHTLDEYVIDTPLSQVILPVIRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0306923_104511372	3300031910	Soil	MQPRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVADIAGFLTEQPRS
Ga0306923_105458582	3300031910	Soil	MEPSDGGEVSWPPSSHTSSGQITDAISSLNGAWLHTLDEYVIDTPLSQVILPVMRVCFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0306923_106554662	3300031910	Soil	MEPRDGLEVSGRPSGHLSSRQTRDAISSLNEAWLHTFDEYVIHTPLSQVILPLMRACFFGGATYAVLLAQRGHGDRVVSDIARFLTEQPRS
Ga0306923_109949861	3300031910	Soil	SARQTRDAISSLNEAWLHTLDEYVIDKPLSKVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQPRS
Ga0306921_100487332	3300031912	Soil	MGAHREDEVSRPPVAGLRSTQNPIAISSLNEAWLHTVDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0310913_105222841	3300031945	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLNEAWLHTLDEYVADTPLSQVILPLMRVCFFGGATYAVLLAQRGHGNQVA
Ga0310913_107126951	3300031945	Soil	MGDHREDEASRPPAGGLRSTQNPIAISSLNEAWLHTLDEYVADTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVVADITGFITEQPRS
Ga0310913_112549011	3300031945	Soil	MESRDGGEVSRRPSGPPSSRQTRDAILSLNEAWLHTLDEYVVDTPLIQIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPWS
Ga0310910_111069202	3300031946	Soil	MEPRDGGEVSGRPSGPLSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRL
Ga0310910_111851822	3300031946	Soil	MEPADHDKVRWPSSDHTSSAQITDAIFSLNEAWLRTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQLVADIAGFLTEQPRS
Ga0306926_105900222	3300031954	Soil	MEPRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILTVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPGS
Ga0306926_109439692	3300031954	Soil	ETMEPRDGLEVSGRPSGHLSSRQTRDAISSLNEAWLHTFDEYVIHTPLSQVILPLMRACFFGGATYAVLLAQRGHGDRVVSDIARFLTEQPRS
Ga0306922_100905344	3300032001	Soil	MEPRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDMPLSQVILPAMRACFFGGAAYAVLLAQRGHGNQVVTDIAGFLTEQLGS
Ga0306922_119099221	3300032001	Soil	MKRRDGGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVVDTPLIQIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPWS
Ga0310911_103522591	3300032035	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDMPLSQVILPAMRACFFSGAAYAVLLAQRGHGNQVVTDIAGFLTEQLGS
Ga0318545_100442892	3300032042	Soil	MEPRGSGEVSGRPSGPPSSRQTRDAILSLNEAWLHTLDEYVIDTPLSQVILPVMRACFFGGAAYAVLLAQRGHGNQVVFDIA
Ga0318558_106032532	3300032044	Soil	MEPRDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRL
Ga0318532_101852542	3300032051	Soil	MEPRDGGEVSERPSGHLSSRKTRDAILSLNEAWLHTLDEYVIDMPLSQVILPAMRACFFGGAAYAVLLAQRGHGNQVVTDIAGFL
Ga0318506_104623161	3300032052	Soil	MEPRGSGEVSGRPSGPLSSRQTRDAILSLNEAWLCTLDEYVIDTSLSEVILPVMRACFFGGAAYAVLLAQRGHGNQAVADIAGFLAEQP
Ga0318553_102910932	3300032068	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLNEAWLHTLDEYVADTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0306924_100381725	3300032076	Soil	MEPRDGGEVSGHPSGHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPAMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0318577_103834031	3300032091	Soil	MGAHREDEVSGPPTGGLRSTQNPIAISSLDEAWLHTLDEYVADTPLSQVILPLMRACFFGGATYAVLLAQRGHGNQVAADITGFITEQPRS
Ga0318540_105017411	3300032094	Soil	MEPADHDKVRWPSSDHTSSAQITDAIFSLNEAWLRTLDEYVIDTPLSQVILPVMRACFFGGATYAVLLAQRGHGNQL
Ga0306920_1004954571	3300032261	Soil	MEPRDGGEVSGRPSVHRSSRQTRDDILSLNEAWLHTIDEYVVDMPLSQVILPVMRTCFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPRS
Ga0306920_1010224742	3300032261	Soil	MEPRDGGEVSGRPSRHLSSRQTRDAISSLNEAWLHTLDEYVIDTPLSQVILPLMRACFFAGATYAVLLAQRGHGDRVVSDIALFLTEQPRS
Ga0306920_1027829342	3300032261	Soil	MESRDGGEVSRRPSGPPSSRQTRDAILSLNEAWLHTLDEYVVDTPLSQIILPVMRACFFGGATYAVLLAQRGHGNQVVSDIAGFLTEQPGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056233

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences