Metagenome / Metatranscriptome Family F056116

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056116
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	43 residues
Representative Sequence	MKKYLVAAACLTLVAGVVYADKLNKEQKRLEEAGVVMQEVLNIP
Number of Associated Samples	111
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.10 %
% of genes near scaffold ends (potentially truncated)	97.10 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.826 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (26.812 % of family members)
Environment Ontology (ENVO)	Unclassified (34.058 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF11752	DUF3309	10.14
PF04203	Sortase	5.07
PF00882	Zn_dep_PLPC	2.17
PF00092	VWA	1.45
PF13426	PAS_9	1.45
PF13545	HTH_Crp_2	0.72
PF00027	cNMP_binding	0.72
PF00011	HSP20	0.72
PF04366	Ysc84	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	5.07
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	49.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.70 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.07 %
Unclassified	root	N/A	2.17 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.90 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.07 %
Unclassified	root	N/A	2.17 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.45 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.07 %
Unclassified	root	N/A	2.17 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	2.90 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.45 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.07 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	2.17 %
Unclassified	root	N/A	2.17 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.72 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.07 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	2.17 %
Unclassified	root	N/A	2.17 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.72 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002FJJB6	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
2170459005\|F1BAP7Q01BGBTM	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300000789\|JGI1027J11758_12132344	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300001167\|JGI12673J13574_1012431	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300001356\|JGI12269J14319_10256067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	649	Open in IMG/M
3300001593\|JGI12635J15846_10588571	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300001867\|JGI12627J18819_10415362	Not Available	548	Open in IMG/M
3300002245\|JGIcombinedJ26739_100578937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300002671\|Ga0005481J37269_105048	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300003298\|Ga0006841J48915_134875	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300003351\|JGI26346J50198_1031454	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300003505\|JGIcombinedJ51221_10133040	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300004091\|Ga0062387_100002865	All Organisms → cellular organisms → Bacteria	5101	Open in IMG/M
3300004099\|Ga0058900_1355442	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300004103\|Ga0058903_1446627	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300004104\|Ga0058891_1020334	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	626	Open in IMG/M
3300004117\|Ga0058893_1000961	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300004117\|Ga0058893_1330775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	665	Open in IMG/M
3300004118\|Ga0058886_1370878	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300004119\|Ga0058887_1424001	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300004132\|Ga0058902_1241044	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300004133\|Ga0058892_1312702	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300004137\|Ga0058883_1008657	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300004137\|Ga0058883_1539644	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300004139\|Ga0058897_10866782	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300004139\|Ga0058897_11089017	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300004140\|Ga0058894_1023914	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300004140\|Ga0058894_1294324	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300004140\|Ga0058894_1469296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	740	Open in IMG/M
3300004152\|Ga0062386_100194461	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300004598\|Ga0068975_1161114	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300004602\|Ga0068960_1214702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	739	Open in IMG/M
3300004631\|Ga0058899_10150672	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300004631\|Ga0058899_10235021	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300004631\|Ga0058899_11846783	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300004631\|Ga0058899_12270089	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300004631\|Ga0058899_12296364	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300004969\|Ga0072327_1276927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	721	Open in IMG/M
3300005435\|Ga0070714_100371496	All Organisms → cellular organisms → Bacteria	1346	Open in IMG/M
3300005437\|Ga0070710_10757688	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300005541\|Ga0070733_10170677	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300005610\|Ga0070763_10574263	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006050\|Ga0075028_100897318	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300006163\|Ga0070715_10248661	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300006174\|Ga0075014_100935301	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300006175\|Ga0070712_101241221	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300006176\|Ga0070765_100109061	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2407	Open in IMG/M
3300006804\|Ga0079221_11221989	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300006871\|Ga0075434_100022511	All Organisms → cellular organisms → Bacteria → Acidobacteria	6136	Open in IMG/M
3300007258\|Ga0099793_10317064	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300007265\|Ga0099794_10388107	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300009176\|Ga0105242_12873933	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300009683\|Ga0116224_10580309	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300009698\|Ga0116216_10882498	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300010339\|Ga0074046_10799211	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300010379\|Ga0136449_100563360	All Organisms → cellular organisms → Bacteria → Acidobacteria	1955	Open in IMG/M
3300010379\|Ga0136449_103201114	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300011081\|Ga0138575_1175846	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300011108\|Ga0138601_104752	All Organisms → cellular organisms → Bacteria → Proteobacteria	729	Open in IMG/M
3300011120\|Ga0150983_11101671	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300011120\|Ga0150983_12257865	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300011120\|Ga0150983_12512242	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300011120\|Ga0150983_13582521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	638	Open in IMG/M
3300011120\|Ga0150983_14572548	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300011120\|Ga0150983_15612648	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300011120\|Ga0150983_15869087	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300011120\|Ga0150983_16483902	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300012189\|Ga0137388_10010284	All Organisms → cellular organisms → Bacteria	6570	Open in IMG/M
3300012202\|Ga0137363_10001563	All Organisms → cellular organisms → Bacteria → Acidobacteria	13267	Open in IMG/M
3300012205\|Ga0137362_10005024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9080	Open in IMG/M
3300012205\|Ga0137362_10017385	All Organisms → cellular organisms → Bacteria → Acidobacteria	5456	Open in IMG/M
3300012205\|Ga0137362_10789038	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300012923\|Ga0137359_10794644	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300012961\|Ga0164302_10170041	All Organisms → cellular organisms → Bacteria → Acidobacteria	1307	Open in IMG/M
3300012986\|Ga0164304_10676717	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300012987\|Ga0164307_11921636	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300014155\|Ga0181524_10333382	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300014162\|Ga0181538_10032664	All Organisms → cellular organisms → Bacteria → Proteobacteria	3423	Open in IMG/M
3300015264\|Ga0137403_10028858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5886	Open in IMG/M
3300015371\|Ga0132258_12560404	All Organisms → cellular organisms → Bacteria → Acidobacteria	1275	Open in IMG/M
3300015373\|Ga0132257_100119448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3060	Open in IMG/M
3300017933\|Ga0187801_10031899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1851	Open in IMG/M
3300019187\|Ga0184584_109785	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300020581\|Ga0210399_10486918	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300020581\|Ga0210399_11572095	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300020583\|Ga0210401_10027559	All Organisms → cellular organisms → Bacteria	5423	Open in IMG/M
3300020583\|Ga0210401_10141790	All Organisms → cellular organisms → Bacteria → Acidobacteria	2248	Open in IMG/M
3300021088\|Ga0210404_10243948	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300021088\|Ga0210404_10796024	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300021170\|Ga0210400_10445392	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300021171\|Ga0210405_11081495	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300021180\|Ga0210396_10558523	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300021180\|Ga0210396_11551226	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300021181\|Ga0210388_10278312	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300021401\|Ga0210393_11525480	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300021403\|Ga0210397_11398850	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300021474\|Ga0210390_10613483	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300021475\|Ga0210392_10570553	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300021559\|Ga0210409_10066146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3368	Open in IMG/M
3300024331\|Ga0247668_1046234	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300025900\|Ga0207710_10326446	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300025905\|Ga0207685_10510869	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300025916\|Ga0207663_10434306	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M
3300025924\|Ga0207694_11555524	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300025934\|Ga0207686_10978501	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300025941\|Ga0207711_11814654	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300026482\|Ga0257172_1041250	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300026514\|Ga0257168_1155523	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300027629\|Ga0209422_1029108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300027651\|Ga0209217_1186713	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300027671\|Ga0209588_1159198	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300027812\|Ga0209656_10233832	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300027854\|Ga0209517_10287666	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300027854\|Ga0209517_10686278	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300027869\|Ga0209579_10313294	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	847	Open in IMG/M
3300027884\|Ga0209275_10589012	Not Available	638	Open in IMG/M
3300027889\|Ga0209380_10595742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	640	Open in IMG/M
3300028381\|Ga0268264_10852509	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300029636\|Ga0222749_10813989	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300030494\|Ga0310037_10458753	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300030659\|Ga0316363_10225885	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300030842\|Ga0075404_11250474	Not Available	514	Open in IMG/M
3300030973\|Ga0075395_10770960	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300030991\|Ga0073994_10006619	All Organisms → cellular organisms → Bacteria	1271	Open in IMG/M
3300031057\|Ga0170834_111284374	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300031057\|Ga0170834_112510259	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300031128\|Ga0170823_15427435	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300031446\|Ga0170820_11488018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300031469\|Ga0170819_16148960	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300031591\|Ga0310116_113517	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	733	Open in IMG/M
3300031708\|Ga0310686_116890947	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300031962\|Ga0307479_11799070	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300032180\|Ga0307471_100084703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2806	Open in IMG/M
3300032180\|Ga0307471_100197177	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300032180\|Ga0307471_100245802	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300033405\|Ga0326727_10920013	All Organisms → cellular organisms → Bacteria → Acidobacteria	651	Open in IMG/M
3300033513\|Ga0316628_102925637	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300033982\|Ga0371487_0212504	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.48%
Host-Associated	Host-Associated	6.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.96%
Aquatic	Environmental → Aquatic	6.52%
Plants	Host-Associated → Plants	6.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.51%
Freshwater	Environmental → Aquatic → Freshwater	5.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Sediment	Environmental → Aquatic → Sediment	1.45%
Peat	Environmental → Terrestrial → Peat	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	34.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	29.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.91%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	26.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.45%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001167	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002671	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF130 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003298	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004117	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004132	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004133	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004598	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004602	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004969	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011081	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011108	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031591	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_08210130	2170459003	Grass Soil	MKKLIVAAACLTLAAGTVYAAKLNKEQKRLENCGVVMTEVLNIPDNIP
E41_03348520	2170459005	Grass Soil	MKKYLVAAACLTLISGAVYARKLNKEQKRLEECGVVM
JGI1027J11758_121323443	3300000789	Soil	MKKYLVAAAFLTLAAGAVYAANKEQKRLENCGVVMQ
JGI12673J13574_10124311	3300001167	Forest Soil	MKKYLVAAACLTLISGAVYARKLNKEQKRLEECGVV
JGI12269J14319_102560673	3300001356	Peatlands Soil	MKKYLVAAACLTLVAGVVYADKLNKEQKRLEEAGVVMQ
JGI12635J15846_105885711	3300001593	Forest Soil	MKRYLVGAICLTLVTGALYAKKLNNEQKRLENCGVVMQEVLNIP
JGI12627J18819_104153621	3300001867	Forest Soil	MKKYLVAAACLTLVSGAVYARKLNKEQKRLEECGVVMQE
JGIcombinedJ26739_1005789371	3300002245	Forest Soil	MKRYLIGAACLALAAGAVYAAKLNKEQKRLEECGVVMQE
Ga0005481J37269_1050482	3300002671	Forest Soil	MKKLLVTAACLSLVAGAVYARKLNKEQRRLEECGVVMQEVLNVPEN
Ga0006841J48915_1348752	3300003298	Peatlands Soil	MKKYLVAAACLTLVAGVVYADKLNKEQKRLEEAGVVMQEV
JGI26346J50198_10314541	3300003351	Bog Forest Soil	MKKYIVIAACLALAAGTADAQDLNKEQKRLEESGVVLQEVLNIPENIPHDLLEKAEC
JGIcombinedJ51221_101330401	3300003505	Forest Soil	MKKFLVTAACLTFAAGAVYAHKLNREQRRLEECGVVMSEILHVPDDIPQ
Ga0062387_10000286511	3300004091	Bog Forest Soil	MKKYIVIAACLALAAGTADAQDLNKEQKRLEESGVVLQEVLNIPENIPHDLLEK
Ga0058900_13554421	3300004099	Forest Soil	MKRFMVAATCLTFVAGAVYADKLNKEQRRLENCGVVMQEVLNVPEN
Ga0058903_14466271	3300004103	Forest Soil	MKKLIVAAACFSLVAGAVYARQLNKEQRRLEECGTVLQEVL
Ga0058891_10203341	3300004104	Forest Soil	MKRILIGAACITFASVSLFASDLNKEQRRLEESGVVMQEV
Ga0058893_10009612	3300004117	Forest Soil	MNRSLIGAACITFAAVSVFASDLNKEQKRLEESGVVMQEVLNVP
Ga0058893_13307751	3300004117	Forest Soil	MNRSLIGAVCITFAAVSVFASDLNKEQKRLEESGVVMQEV
Ga0058886_13708781	3300004118	Forest Soil	MKKFMVTAACLSLVAGAVYADKLNKEQKRLENCGVVMTEVLNIPDNIPH
Ga0058887_14240012	3300004119	Forest Soil	MKKFMVTAACLSLVAGVVYAKKMNKEQRRLENCGVVMTEVLNIPDNIPHEL
Ga0058902_12410441	3300004132	Forest Soil	MKRFMVAATCLTFVAGAVYADKLNKEQRRLENCGVVMQEVLNVPENIPRE
Ga0058892_13127023	3300004133	Forest Soil	MEVKMNRSLIGAACITFAAVSVFASDLNKEQKRLEESGVVMQEVLNV
Ga0058883_10086573	3300004137	Forest Soil	MKRSLIGAACITLAAVSVFAADLNKEQKRLEESGVVMQEV
Ga0058883_15396441	3300004137	Forest Soil	MKRSLIGAACITLAAVSVFASDLNKEQKRLEESGVVMQEVLNVPD
Ga0058897_108667821	3300004139	Forest Soil	MNRSLIGAACITFAAVSVFASDLNKEQKRLEESGVVMQEV
Ga0058897_110890171	3300004139	Forest Soil	MKRSLIGAVCITFAAVSVFASDLNKEQKRLEESGVVMQEV
Ga0058894_10239141	3300004140	Forest Soil	MKKFMVAAACLTLAAGTLYAAKLNKEQKRLENCGVVMQEVLNVPENI
Ga0058894_12943241	3300004140	Forest Soil	MKRLMVTAACLTLVAGAVYAEKLNKEQKRLTECGVVMQEVLNVP
Ga0058894_14692961	3300004140	Forest Soil	MKRILIGIACITLAGVTVLAAELNKEQKRLEESGVVMQEVLNVP
Ga0062386_1001944611	3300004152	Bog Forest Soil	MKKYLAAAACLSLVAGSVYPKKLNKEQRRLEECGVVMQEVLNIP
Ga0068975_11611141	3300004598	Peatlands Soil	MKKYLVAAACLTLVAGVVYADKLNKEQKRLEEAGVVMQEVLNI
Ga0068960_12147021	3300004602	Peatlands Soil	MKKYLVAAACLTFLAGVVYADKLNKEQKRLEEAGVVMQEVLNIPDNIP
Ga0058899_101506723	3300004631	Forest Soil	MKKFLVTAACLTFAAGAVYAHKLNREQRRLEECGVVMSEI
Ga0058899_102350211	3300004631	Forest Soil	MKRILIGAACITLASVSVFASDLNKEQKRLEESGVVMQEVLNV
Ga0058899_118467831	3300004631	Forest Soil	MKKFVVTAACLTLAATAVYARNLNKEQKRLEECGVVMQEVLNIPDNI
Ga0058899_122700891	3300004631	Forest Soil	MKRYLIGAVCLTLVAGAVYASKLNREQKRLEECGVVMQEVLNVPDNI
Ga0058899_122963641	3300004631	Forest Soil	MKKLIVAAACFSLVAGAVYARQLNKEQRRLEECGTVLQEVLNIPDNIPHDLL
Ga0072327_12769273	3300004969	Peatlands Soil	MKKYLVAAACLTFLAGVVYADKLNKEQKRLEEAGVVMQEVLNIP
Ga0070714_1003714961	3300005435	Agricultural Soil	MKKYLVAATCLTLVAGAICAKKLNNEQKRLEECGVVMQEVLNVP
Ga0070710_107576881	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKKYLVAVTCLTLVAGAVCAKKLNNEQKRLEECGVVMQEVL
Ga0070733_101706771	3300005541	Surface Soil	MKKLIVAAACFSLVAGAVYARQLNKEQRRLEECGTVLQEVLNIPDNIPHDLLAK
Ga0070763_105742632	3300005610	Soil	MKRSLIGAACITLAAVSVFASDLNKEQKRLEESGVVMQEVL
Ga0075028_1008973182	3300006050	Watersheds	MKKFMVAAACLTLAAGTVCAAKLNKEQKRLEECGVVMQEVLNVPD
Ga0070715_102486613	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLLVTAACLSLVAGAVYARKLNKEQRRLEECGVVMQEVLNVPENI
Ga0075014_1009353012	3300006174	Watersheds	VKKYLVAVACLTLAVGAVSAQDLNKEQKRLEESGV
Ga0070712_1012412212	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKKYLVAATCLTFVAGALYAKKLNNEQKRLEECGVVMQEVLNV
Ga0070765_1001090616	3300006176	Soil	MKRHLVTTAICLTFAAGAVYAAKLNKEQKRLEECGVVMQEVLNVPDNIP
Ga0079221_112219892	3300006804	Agricultural Soil	MKRSLIGAACITLAAVSVFASDLNKEQKRLEESGVVMQE
Ga0075434_10002251110	3300006871	Populus Rhizosphere	MKKYLVAATCLTLVGGVVFAKKLNDEQKRLEECGVVMQEVL
Ga0099793_103170642	3300007258	Vadose Zone Soil	MKRYMVTAVCLTLVVGAVYAQKLNKEQTRLEESGVVMQEV
Ga0099794_103881072	3300007265	Vadose Zone Soil	MRRILIGAACITLAGVSVLASELNKEQKRLEESGVVLQEVL
Ga0105242_128739331	3300009176	Miscanthus Rhizosphere	MKKYLIAATCLTLVAGAVFAKKLNNEQKRLEECGVVMQEV
Ga0116224_105803092	3300009683	Peatlands Soil	MKKYLVAAACLTLAAGVVYAQDLNKEQKRLEESGVVMQEVLNIPDNI
Ga0116216_108824981	3300009698	Peatlands Soil	MEVSMKKFMVAAACLTLAASTVYGQKLNKEQKRLEESGVVMQEVLN
Ga0074046_107992111	3300010339	Bog Forest Soil	MKKYLVAAACLSLVAGVVYAQKLNREQKRLEEAGVV
Ga0136449_1005633604	3300010379	Peatlands Soil	MKKYLITAVCLTLVAGAAYSQKLNKEQKRLEESGAVLQEVLNI
Ga0136449_1032011141	3300010379	Peatlands Soil	MKKYLVVAACLSLVAGVVFAKKLNKAQKRLEEAGVVMQEVLNIPPSVPTSLRQV*
Ga0138575_11758462	3300011081	Peatlands Soil	MKKFMVTAACLTLVAGAVYADKLNKEQKRLEECGVVMQEVLNIPDNI
Ga0138601_1047521	3300011108	Peatlands Soil	MKKYLVAAACLTLVAGVVYADKLNKEQKRLEEAGVVMQEVLNIP
Ga0150983_111016713	3300011120	Forest Soil	MKRFMVTAVCLTLVAGAVYAQKLNKEQKRLEESGVVMQEVL
Ga0150983_122578651	3300011120	Forest Soil	MKRHLITTAVCLTLAAGAVYASKLNKEQKRLEECGVVMQEVLNIP
Ga0150983_125122421	3300011120	Forest Soil	MKRFMVAAVCLTLVAGAVYASKLNKEQKRLENCGVVM
Ga0150983_135825211	3300011120	Forest Soil	MKKYVVAAACLTLLASVVSAQDLNKEQKRLEESGVVLREVLNIPDNIPHD
Ga0150983_145725482	3300011120	Forest Soil	MKKYLLAATCLTLVAGAVYAHKLNKEQRRLEECGVVMQEVLNVP
Ga0150983_156126482	3300011120	Forest Soil	MKSFMVSIACLTLVAGAVYADKLNKEQKRLEECGTVMQEVLN
Ga0150983_158690871	3300011120	Forest Soil	MKKFMVTAACLSLVAGAVYAKNKEQKRLENCGVVMQEVLNIPDNI
Ga0150983_164839022	3300011120	Forest Soil	MKRFLVGAMCLTLVAAAVYAKKLNNEQKRLENCGVVMQEVLNI
Ga0137388_100102841	3300012189	Vadose Zone Soil	MKKFMVTAACLSLVAGAVYAKNKEQKRLENCGVVMQEV
Ga0137363_1000156319	3300012202	Vadose Zone Soil	LTVEVVMKKYLLAATCLTLVAGVVYAKKLNNEQKRLEECGVVMQEVLNV
Ga0137362_1000502413	3300012205	Vadose Zone Soil	LTVEVVMKKYLLAATCLTLVAGVVYAKKLNNEQKRLEECGVVMQEVLNVPDN
Ga0137362_100173859	3300012205	Vadose Zone Soil	MKKYLVAATCLTLVAGVVYAKKLNNEQKRLEECGVVMQEVLNVPDN
Ga0137362_107890383	3300012205	Vadose Zone Soil	MKKYLVAVACLTLAAGAVYAANKEQKRLENCGVVMQEVINVPD
Ga0137359_107946441	3300012923	Vadose Zone Soil	LTVEVVMKKYLVAATCLTLVAGVVYAKKLNNEQKRLEECGVVMQEVLNVPDNIPQ*
Ga0164302_101700413	3300012961	Soil	MKKYLVAASCLTLIAGVVYAKQLNNEQKRLEQCGVVMQEVLN
Ga0164304_106767172	3300012986	Soil	MKKYLVTAACLALVAGAVYARNKEQKRLENCGVVMQEV
Ga0164307_119216362	3300012987	Soil	MKRYLITAVCVGLSAGVVYAASLNKEQKRLEECGVVMQE
Ga0181524_103333823	3300014155	Bog	MKRYLVAAACLTLAAGVVYAQDLNKEQKRLEESGVVMQEVL
Ga0181538_100326641	3300014162	Bog	MKNYLVVAACLSLAAGVVYAQDLNKEQKRLEESGTVMQEVLNIPDNIPHD
Ga0137403_100288581	3300015264	Vadose Zone Soil	MKKYLAVAGCLALVAGAVYAKKMNREQKRLEECGVVMQE
Ga0132258_125604041	3300015371	Arabidopsis Rhizosphere	MKKYLVAATCLTIVAGAVFAKQLNNEQKRLEECGVVMQEVL
Ga0132257_1001194481	3300015373	Arabidopsis Rhizosphere	MKKYLVAATCLTLVGGVVFAKKLNDEQKRLEECGV
Ga0187801_100318994	3300017933	Freshwater Sediment	MKKYLVAAACLTLTAGVVYAQDLNKEQKRLEEAGVVMQEVLNIP
Ga0184584_1097851	3300019187	Soil	MKKFMVTAACLTLAAGAVYARQLNKEQRRLEECGVVMQEVLNIPDNIP
Ga0210399_104869181	3300020581	Soil	MKRYLVTAACLTLVAGALYARKLNKEQNRLEECGVVMQEVLN
Ga0210399_115720951	3300020581	Soil	MEVSEMKRHLITTAVCLTLAAGAVYASKLNKEQKR
Ga0210401_1002755911	3300020583	Soil	MKRHLVATALCLTLAAGVVYAAKLNKEQKRLEECGVV
Ga0210401_101417901	3300020583	Soil	MKHYLAVAVCLTLGAAILPAQELNKEQKRLEESGVVMQEVL
Ga0210404_102439481	3300021088	Soil	MKKFMVAAACLTLAAGTLYAAKLNKEQKRLENCGVVMQEVLNVPENIPHE
Ga0210404_107960242	3300021088	Soil	MKRFMVGAVCLTLVAGVVYAEKMNKEQRRLEECGTVMQEVLG
Ga0210400_104453921	3300021170	Soil	MKKFLVTAACLSLVAGLVYARKLNKEQRRLEECGVV
Ga0210405_110814952	3300021171	Soil	MNRYLAGAVCLTLVAGAVYAKKLNKEERRLEECGVVM
Ga0210396_105585231	3300021180	Soil	MKKFLVTAACLTFAAGAVYAHKLNREQRRLEECGVVM
Ga0210396_115512262	3300021180	Soil	MKKYLIAAACLTLMASAVDAKKLNKEQKRLEEAGVVMQEVLNIPDN
Ga0210388_102783121	3300021181	Soil	MKKFLVTAACLTFAAGAVYAHKLNREQRRLEECGVVMSEILHVPDDIP
Ga0210393_115254801	3300021401	Soil	MKKYLVAAACLTLISGAIYARKLNKEQKRLEECGVVMQEVLNVPDN
Ga0210397_113988501	3300021403	Soil	MKRSLIGAACITLAAVSVFAADLNKEQKRLEESGVVMQEVLNV
Ga0210390_106134833	3300021474	Soil	MKKLMVTAACLSLVAGAVYARQLNKEQKRLEECGTVL
Ga0210392_105705531	3300021475	Soil	MKKYLVAAACLTLVASAVYARKFNKEQKRLEECGVVMQEVLNVP
Ga0210409_100661461	3300021559	Soil	MKKFMVTAACLSLVAGAVYASKLNKEQKRLEECGVVMQEVLNIPDN
Ga0247668_10462341	3300024331	Soil	MKKYLVAATCLTLVAGAVFAKTLNNEQKRLEECGVVMQE
Ga0207710_103264462	3300025900	Switchgrass Rhizosphere	MKKYLVAATCLTLVAGAVFAKKLNNEQKRLEECGLVMQEV
Ga0207685_105108692	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKKYLVAATCLTLVAGAIYAKKLNNEQKRLEECGVVMQEVLNVPDNI
Ga0207663_104343063	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKKYLVAATCLTFVAGALYAKKLNNEQKRLEECGVVMQEVLNVPDNIP
Ga0207694_115555242	3300025924	Corn Rhizosphere	MKKYLVAATCLTLVAGAVFAKKLNNEQKRLEECGLVMQEVLNVPDKI
Ga0207686_109785011	3300025934	Miscanthus Rhizosphere	MKKYLIAATCLTLVAGAVFAKKLNNEQKRLEECGVVMQEVLNVP
Ga0207711_118146541	3300025941	Switchgrass Rhizosphere	MKKYLVAAACLTLVGGVVFAKKLNDEQKRLEECGVVMQEVLNMPDN
Ga0257172_10412502	3300026482	Soil	MKRFMVTAACLTLAAGAVYASKLNKEQKRLEECGVVLQEVLNIP
Ga0257168_11555231	3300026514	Soil	MKKYLVAATCLTLVAGVVYAKKLNNEQKRLEECGVVMQEVLNVPDNIPQ
Ga0209422_10291081	3300027629	Forest Soil	MKRYLVGAVCLALVAGAVYARKLNNEQKRLENCGVVMQEVLNIPDNI
Ga0209217_11867132	3300027651	Forest Soil	MKRLLVVAACFTLVAGALSAKKMNKEEKRLENCGLVMQEILN
Ga0209588_11591982	3300027671	Vadose Zone Soil	MRRILIGAACITLAGVSVLASELNKEQKRLEESGVV
Ga0209656_102338321	3300027812	Bog Forest Soil	MKKYLVAAACLSLAAGVVSAQNLNKEQKRLEESGI
Ga0209517_102876661	3300027854	Peatlands Soil	MKKYLVVAACLSLVAGVVFAKKLNKAQKRLEEAGVVMQEVLNIPPSVPTSLRQV
Ga0209517_106862782	3300027854	Peatlands Soil	MKKYLVAAACLSLVAGVVYAKNLNKEQKRLEEAGVVMQEVLNIPD
Ga0209579_103132943	3300027869	Surface Soil	MKKLMVTAACLTLAAGAVYARELNKEQRRLEACGVVMSEVLHVPD
Ga0209275_105890122	3300027884	Soil	MKRHLVATAVCLTLAAGVVYASKLNKEQKRLEECGVVM
Ga0209380_105957421	3300027889	Soil	MKRFMVAAACLTLVAGAVAGRKGNKEQRRLEECGVVMKEVLNVPE
Ga0268264_108525091	3300028381	Switchgrass Rhizosphere	MKKYLVAATCLTLVAGAVFAKKLNNEQKRLEECGV
Ga0222749_108139891	3300029636	Soil	MKRYLVGAVCLTLAAGAVYARKLNNEQKRLENCGVVMQEVLNIP
Ga0310037_104587532	3300030494	Peatlands Soil	MKKFMVAAACLTLAASTVYGQKLNKEQKRLEESGVVMQ
Ga0316363_102258851	3300030659	Peatlands Soil	MKNYPVVAACLTLAAGVVYAQDLNKEQKRLEESGTVMQEVLNIPDNIP
Ga0075404_112504741	3300030842	Soil	MKKYLVAATCLTLVAGAIYAKKLNNEQKRLEECGVVMQEVL
Ga0075395_107709602	3300030973	Soil	MKKYLVAAACLTLISGAVYARKLNKEQKRLEECGV
Ga0073994_100066193	3300030991	Soil	MKRYLVGAVCLTLVAGVVYARKLNKEQDRLENCGVVMQVLNIPDNIPTDLLEK
Ga0170834_1112843743	3300031057	Forest Soil	MKKYLLAATCLTLVAGVVYAQKLNKEQRRLEECGVVMQEVLNVP
Ga0170834_1125102591	3300031057	Forest Soil	MKKYLVAAACLTLISGAVYARKLNKEQKRLEECGVVMQEVLNVP
Ga0170823_154274353	3300031128	Forest Soil	MKKYLVAAACLTLISGAVYARKLNKEQKRLEECGVVMQEVLNVPD
Ga0170820_114880181	3300031446	Forest Soil	MKKYLVAATCLTLVAGAIYAKKLNNEQKRLEECGVVMQ
Ga0170819_161489601	3300031469	Forest Soil	MKKYLVAATCLTLVAGAIYAKKLNNEQKRLEECGVVMQEVLNVPDN
Ga0310116_1135173	3300031591	Soil	MKRILIGAACITIAAVSVFASDLNKEQKRLEESGVVMQEVLNVP
Ga0310686_1168909474	3300031708	Soil	MKRFMVTAACFTLAATAVYARSLNKEQKRLEECGVVMQEVL
Ga0307479_117990702	3300031962	Hardwood Forest Soil	MKRYLVGAMCLTLVAAAVYAKKLNNEQKRLENCGVVMQEVLNIPD
Ga0307471_1000847034	3300032180	Hardwood Forest Soil	MKLSTIGAVCFALAGVSVLAADLNKEQERLENCGVVMQEVLNIPDAVPHE
Ga0307471_1001971775	3300032180	Hardwood Forest Soil	MKRFMVAVACLSLVAGAVVAKKANKEQRRLEECGVVMQEVLNVPENIPHE
Ga0307471_1002458021	3300032180	Hardwood Forest Soil	MKRYFIGAVCLTLVAGVVYARNLNKEQKRLEECGVVM
Ga0326727_109200131	3300033405	Peat Soil	MKNYLVAAACLTLAAGVISAQDLNKEQKRLEESGTVMQEVLNIPDN
Ga0316628_1029256372	3300033513	Soil	MKKLLVTAACLSLVAGAVYARKLNKEQKRLEDCGVVMQEVLNVPENI
Ga0371487_0212504_781_915	3300033982	Peat Soil	MKKYLVAAACFSLVAGVVYAQKLNKEQKRLEECGVVMQEVLNIPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056116

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences