Metagenome Family F056113

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056113
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	92 residues
Representative Sequence	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL
Number of Associated Samples	119
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.50 %
% of genes near scaffold ends (potentially truncated)	39.86 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.275 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.768 % of family members)
Environment Ontology (ENVO)	Unclassified (39.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.93% β-sheet: 14.66% Coil/Unstructured: 47.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.79
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.79
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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.0: automated matches	d6qpqb_	6qpq	0.64699
a.4.5.35: C-terminal fragment of elongation factor SelB	d2v9va2	2v9v	0.63589
a.4.5.0: automated matches	d3l7wa_	3l7w	0.6146
a.4.5.85: RPO3F domain-like	d2dk8a1	2dk8	0.61138
a.4.5.11: Helicase DNA-binding domain	d1fnna1	1fnn	0.60637

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF08447	PAS_3	53.62
PF01145	Band_7	4.35
PF00005	ABC_tran	2.17
PF12700	HlyD_2	1.45
PF13533	Biotin_lipoyl_2	0.72
PF12840	HTH_20	0.72
PF16576	HlyD_D23	0.72
PF12704	MacB_PCD	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.52 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.45 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.45 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	34.06 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.45 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	34.06 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.45 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	34.06 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.45 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	34.06 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.45 %
Salinispora oceanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora oceanensis	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100641471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100641710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1183	Open in IMG/M
3300000550\|F24TB_10082333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300000956\|JGI10216J12902_109956878	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300002906\|JGI25614J43888_10199452	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300004157\|Ga0062590_100623767	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300004479\|Ga0062595_100948528	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300004643\|Ga0062591_100820812	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005174\|Ga0066680_10021106	All Organisms → cellular organisms → Bacteria	3565	Open in IMG/M
3300005328\|Ga0070676_10077506	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300005334\|Ga0068869_100570765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300005338\|Ga0068868_101003744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300005340\|Ga0070689_100589543	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300005344\|Ga0070661_100308608	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005353\|Ga0070669_100277451	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005354\|Ga0070675_100600227	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005355\|Ga0070671_101841185	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005366\|Ga0070659_100142280	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300005440\|Ga0070705_100155166	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300005445\|Ga0070708_100022035	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5400	Open in IMG/M
3300005445\|Ga0070708_100166094	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300005451\|Ga0066681_10212130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1162	Open in IMG/M
3300005456\|Ga0070678_100881386	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005467\|Ga0070706_100107288	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598	Open in IMG/M
3300005471\|Ga0070698_100066807	All Organisms → cellular organisms → Bacteria → Proteobacteria	3617	Open in IMG/M
3300005471\|Ga0070698_101060287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300005518\|Ga0070699_101089870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M
3300005545\|Ga0070695_100126988	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300005569\|Ga0066705_10191121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1277	Open in IMG/M
3300005577\|Ga0068857_100292326	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300005598\|Ga0066706_10309978	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300005614\|Ga0068856_102122044	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005719\|Ga0068861_101298321	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300005764\|Ga0066903_101404093	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005764\|Ga0066903_107467814	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005841\|Ga0068863_102103284	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005842\|Ga0068858_102448248	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006042\|Ga0075368_10301146	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300006163\|Ga0070715_10281155	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300006178\|Ga0075367_10817868	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006178\|Ga0075367_11034316	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006353\|Ga0075370_10005256	All Organisms → cellular organisms → Bacteria → Proteobacteria	6409	Open in IMG/M
3300006844\|Ga0075428_100998266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300006845\|Ga0075421_100009004	All Organisms → cellular organisms → Bacteria	12291	Open in IMG/M
3300006845\|Ga0075421_100081001	All Organisms → cellular organisms → Bacteria → Proteobacteria	4096	Open in IMG/M
3300006845\|Ga0075421_100374142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1716	Open in IMG/M
3300006845\|Ga0075421_101864803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora oceanensis	645	Open in IMG/M
3300006847\|Ga0075431_100587078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1099	Open in IMG/M
3300006847\|Ga0075431_101751174	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300006852\|Ga0075433_10153174	All Organisms → cellular organisms → Bacteria	2051	Open in IMG/M
3300006854\|Ga0075425_100005109	All Organisms → cellular organisms → Bacteria	13602	Open in IMG/M
3300006914\|Ga0075436_100415639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	976	Open in IMG/M
3300007076\|Ga0075435_100460543	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300009088\|Ga0099830_10344851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1197	Open in IMG/M
3300009089\|Ga0099828_10552045	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300009090\|Ga0099827_10159997	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300009090\|Ga0099827_11158611	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300009090\|Ga0099827_11449148	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300009100\|Ga0075418_10517503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1282	Open in IMG/M
3300009147\|Ga0114129_10424835	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300009162\|Ga0075423_10077571	All Organisms → cellular organisms → Bacteria → Proteobacteria	3459	Open in IMG/M
3300009162\|Ga0075423_10131287	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300009174\|Ga0105241_12065606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300010329\|Ga0134111_10374949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300010397\|Ga0134124_10772116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300010401\|Ga0134121_12408663	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300010403\|Ga0134123_11365880	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300011444\|Ga0137463_1347661	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012189\|Ga0137388_11528644	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012201\|Ga0137365_10509293	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012204\|Ga0137374_10366943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1155	Open in IMG/M
3300012355\|Ga0137369_10092261	All Organisms → cellular organisms → Bacteria	2507	Open in IMG/M
3300012360\|Ga0137375_10017187	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	8461	Open in IMG/M
3300012469\|Ga0150984_116003533	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300012482\|Ga0157318_1011629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300012685\|Ga0137397_10432206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300012901\|Ga0157288_10271814	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012903\|Ga0157289_10220991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300012904\|Ga0157282_10307482	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300012905\|Ga0157296_10160885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300012910\|Ga0157308_10029365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1301	Open in IMG/M
3300012922\|Ga0137394_10422888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300012922\|Ga0137394_10672156	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300012929\|Ga0137404_11824281	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300014326\|Ga0157380_10400968	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300014745\|Ga0157377_10171043	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300015245\|Ga0137409_10579660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	950	Open in IMG/M
3300015371\|Ga0132258_13463501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1082	Open in IMG/M
3300015371\|Ga0132258_13604530	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300015372\|Ga0132256_101979747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300015373\|Ga0132257_100690280	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300015374\|Ga0132255_103234100	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300018073\|Ga0184624_10538350	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300018076\|Ga0184609_10109983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1245	Open in IMG/M
3300018083\|Ga0184628_10375963	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300018429\|Ga0190272_12565359	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300019362\|Ga0173479_10287531	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300020001\|Ga0193731_1041529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1215	Open in IMG/M
3300022534\|Ga0224452_1233304	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300022756\|Ga0222622_10178000	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300022756\|Ga0222622_10574176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300025899\|Ga0207642_10014233	All Organisms → cellular organisms → Bacteria	2929	Open in IMG/M
3300025903\|Ga0207680_10606375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300025920\|Ga0207649_10372325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300025932\|Ga0207690_10282780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1292	Open in IMG/M
3300025936\|Ga0207670_10413211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300025936\|Ga0207670_11187370	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300025942\|Ga0207689_10031863	All Organisms → cellular organisms → Bacteria → Proteobacteria	4384	Open in IMG/M
3300025945\|Ga0207679_10380921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1237	Open in IMG/M
3300025972\|Ga0207668_10343650	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300025981\|Ga0207640_10170869	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300025981\|Ga0207640_10291684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1286	Open in IMG/M
3300025986\|Ga0207658_10054715	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300026023\|Ga0207677_11512711	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300026075\|Ga0207708_10477270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300026088\|Ga0207641_10106784	All Organisms → cellular organisms → Bacteria	2475	Open in IMG/M
3300026121\|Ga0207683_10033339	All Organisms → cellular organisms → Bacteria → Proteobacteria	4473	Open in IMG/M
3300026304\|Ga0209240_1012054	All Organisms → cellular organisms → Bacteria	3287	Open in IMG/M
3300026323\|Ga0209472_1151610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300026328\|Ga0209802_1081121	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300026548\|Ga0209161_10150657	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300027909\|Ga0209382_10004064	All Organisms → cellular organisms → Bacteria	19807	Open in IMG/M
3300027909\|Ga0209382_10157043	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300027909\|Ga0209382_10324348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1732	Open in IMG/M
3300028380\|Ga0268265_10148183	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300028814\|Ga0307302_10572942	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300028819\|Ga0307296_10351591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300028828\|Ga0307312_11109602	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031226\|Ga0307497_10111879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1081	Open in IMG/M
3300031366\|Ga0307506_10381365	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300031562\|Ga0310886_10268003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300031908\|Ga0310900_10208448	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300031944\|Ga0310884_10664096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300032013\|Ga0310906_10421467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300032180\|Ga0307471_102856804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300032211\|Ga0310896_10933895	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300034115\|Ga0364945_0168896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.80%
Host-Associated	Host-Associated	44.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.72%
Plants	Host-Associated → Plants	44.20%
Aquatic	Environmental → Aquatic	5.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.22%
Sediment	Environmental → Aquatic → Sediment	5.07%
Roots	Host-Associated → Plants → Roots	2.90%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.94%
Loam	Environmental → Terrestrial → Soil → Loam	11.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.90%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.45%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.90%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006414712	3300000364	Soil	LPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDHRSFDDYVLALHGEGAIHLLSHVEPDKLASDVREQCVLHPTGTLLYWLRWL*
INPhiseqgaiiFebDRAFT_1006417102	3300000364	Soil	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHRXGAIXLLSHVEPHKLASDVREQCVXHPXGTLLXWLRWL*
F24TB_100823331	3300000550	Soil	LPDGERSLDYESFKXXXXXXXQRRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGVIHLLSHVEPDKLASDVREQCVIHPTG
JGI10216J12902_1099568781	3300000956	Soil	EAGERRVAQGGLVPIPELRRQVPALDRSAFDDFVFALHREGQVHLLSHVEPDKLSEEVRAECVVHSSGTLLYWLRWL*
JGI25614J43888_101994522	3300002906	Grasslands Soil	PAHLHGVAKTPPRERRLLPYGERSLEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGVIHLLSHVEPDKLSSDVRDHCVVHPSGALLYWLRWL*
Ga0062590_1006237671	3300004157	Soil	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVLHPTGTLLYWLRWL*
Ga0062595_1009485281	3300004479	Soil	LPDGERSLDYESFKDVVRQAGERRVAQGGLVPLPELRRQIPALDHRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVLHPTGTLLYWLRWL*
Ga0062591_1008208122	3300004643	Soil	PPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0066680_100211062	3300005174	Soil	VDYEDFKRVVRENGERRVAQGGLVPIPELRRQCPSLDRQAFDAFVLTLHREGAVHLLSHVESDKLSEAIREQCVVHSTGTLLYWLRWL*
Ga0070676_100775063	3300005328	Miscanthus Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0068869_1005707652	3300005334	Miscanthus Rhizosphere	LPDGERSLDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDPRAFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL*
Ga0068868_1010037442	3300005338	Miscanthus Rhizosphere	VAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL*
Ga0070689_1005895432	3300005340	Switchgrass Rhizosphere	LNYEEFKDVVRQAGERRVAQGGLVPLPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0070661_1003086081	3300005344	Corn Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0070669_1002774511	3300005353	Switchgrass Rhizosphere	DSHDVRVPQRKRHWLIFTERLWPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0070675_1006002272	3300005354	Miscanthus Rhizosphere	LPDGERRLDYDEFKVFVREAGERRVAQGGLVPIPELRRSVPALDRRAFDDFVLALHREGQIHLLSHVEPDKLSEQIRGECVVHSSGTLLYWLRWL*
Ga0070671_1018411851	3300005355	Switchgrass Rhizosphere	PDGERSLNYEEFKDVVRQAGERRVAQGGLVPLPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0070659_1001422802	3300005366	Corn Rhizosphere	LDYESFKHVVRKAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0070705_1001551661	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0070708_1000220353	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRQSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0070708_1001660942	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VDYEDFKNVVRENGERRVAQGGLVPIPELRRQCPTLDRQAFDGFVLTLHREGAVHLLSHVESDKLSEAIREQCVLHPTGTLLYWLRWL*
Ga0066681_102121302	3300005451	Soil	LDYEAFKDVVREAGERRAAQGGLVPIPELRRQVPTLDREAFDAFVLALHREGSIHLLSHVEPDKLSAQIREQCVIHPSGALLYWLRWL*
Ga0070678_1008813862	3300005456	Miscanthus Rhizosphere	QGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0070706_1001072881	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PPRETTLPDGERSLEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRQSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0070698_1000668071	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0070698_1010602871	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0070699_1010898702	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	PPRERRLLPDGERSLEYEDFKRLVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0070695_1001269882	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL*
Ga0066705_101911212	3300005569	Soil	VKIPNGKNTRSFPETGGAPSRGDFLPNGDPRLDYEEFKHVVREAGERRAAQGGLVPLPELRRQVPTLDHQAFDAYILALHREGAVHLLSHVEPDKLSSEILDQCVSHPSGTLLYWLRWL*
Ga0068857_1002923261	3300005577	Corn Rhizosphere	SGSRPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0066706_103099781	3300005598	Soil	LPDGEPQLEYDDFKRHVREAAERRAAQGGLVAIPELRRQCPTRDAREFDQYILALHREGAIHLLSHVEPDKLPDDVRDQCVVHPSGALLYWLRWLEERPGD*
Ga0068856_1021220441	3300005614	Corn Rhizosphere	TEKTLAHFSRSGSRPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0068861_1012983212	3300005719	Switchgrass Rhizosphere	LPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0066903_1014040932	3300005764	Tropical Forest Soil	LRDGEQQVDYEDFKRVVREAGESRAAQGGLIAIPELRQQCAALGREAFDEFVLTLHREGAIHLLSHVEAEKLSASIRDQCVVHPSGTLLYWLRWL*
Ga0066903_1074678141	3300005764	Tropical Forest Soil	LSRPIGGGGLLNGGLVLDYEEFKHVVREAGERRVAQGGLVPIPELRRQVPALDRQAFDAFVLTLHREGAIHLLSHVEPDKLSSEIRDQCMVHASGTLLYWLRWL*
Ga0068863_1021032841	3300005841	Switchgrass Rhizosphere	LPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL*
Ga0068858_1024482481	3300005842	Switchgrass Rhizosphere	LPDGERSLDYEAFKHVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVLHPTGTLLYWLRWL*
Ga0075368_103011462	3300006042	Populus Endosphere	TLAHFHGAAPRRPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0070715_102811553	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LSNGDPRLDYDEFKHVVREAGERRVAQGGLVPIPELRRQVPALDRDAFDAFVLALHREGAIHLLSHVEPDKRSAEIREQCVSHPSGALLYWLRWL*
Ga0075367_108178681	3300006178	Populus Endosphere	REAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0075367_110343161	3300006178	Populus Endosphere	TYGFPWKTHWFISTGAALSPPRVRWLLPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVIHPTGTLLYWLRWL*
Ga0075370_100052561	3300006353	Populus Endosphere	RRVSQTEKTLAHFHGAAPRRPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0075428_1009982662	3300006844	Populus Rhizosphere	LPDGERRLDYEAFKHVVREAGERRAAQGGLVPIPELRRQIPTLDPRAFDDYVLALHREGAIHLLSHVEPDKLSSDVRQQCV
Ga0075421_1000090042	3300006845	Populus Rhizosphere	LPDGERRLDYEAFKHVVREAGERRAAQGGLVPIPELRRQIPTLDPRAFDDYVLALHREGAIHLLSHVEPDKLSSDVRQQCVVHQSGTLLYWLRWL*
Ga0075421_1000810013	3300006845	Populus Rhizosphere	LPDGERSLDYQEFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLTLHREGAIHLLSHVEPDKLSSDVREQCVAHPSGALLYWLRWL*
Ga0075421_1003741423	3300006845	Populus Rhizosphere	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGALLYWLRWL*
Ga0075421_1018648031	3300006845	Populus Rhizosphere	LPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0075431_1005870781	3300006847	Populus Rhizosphere	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSG
Ga0075431_1017511742	3300006847	Populus Rhizosphere	QTAERRSAQGALVPIPELRRDCAALDRATFDDFVLALHREGLIHLLSHVEPDKLAADVRQDCLTPPAGPLLYWVRWL*
Ga0075433_101531741	3300006852	Populus Rhizosphere	AGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVIHPTGTLLYWLRWL*
Ga0075425_1000051094	3300006854	Populus Rhizosphere	LPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVIHPTGTLLYWLRWL*
Ga0075424_1004510883	3300006904	Populus Rhizosphere	LPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVR
Ga0075436_1004156392	3300006914	Populus Rhizosphere	GFPWKTHWFISTGAALSPPRVRWLLPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVIHPTGTLLYWLRWL*
Ga0075435_1004605432	3300007076	Populus Rhizosphere	LEYDDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0099830_103448512	3300009088	Vadose Zone Soil	LEYEDFKRLVREAAERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVREHCVVHPSGTLLYWLRWL*
Ga0099828_105520451	3300009089	Vadose Zone Soil	LPDGELRVEYEDFKRVVREAGESRVAQGGLVPIPELRRQCPSLEHEAFDGFVLTLHREGAIHLLSHVEAHKLSDAIREQCVVHPSGTLLYWLRWL*
Ga0099827_101599971	3300009090	Vadose Zone Soil	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0099827_111586111	3300009090	Vadose Zone Soil	LPDGELRVEYEDFKRVVREAGESRVAQGGLVPIPELRRQCPSLEHEAFDGFVLTLHREGAIHLLSHVEAHKLSDAIREQCV
Ga0099827_114491482	3300009090	Vadose Zone Soil	LEYEEFKTLVREAGERRFAQGGLVPIPELRRQALTLDREAFDTFVLTLHREGMIHLLSHVEPDKLSADIREQCVVHASGALLYWLRWL*
Ga0075418_105175032	3300009100	Populus Rhizosphere	LDYEAFKHVVREAGERRAAQGGLVPIPELRRQIPTLDPRAFDDYVLALHREGAIHLLSHVEPDKLSSDVRQQCVVHQSGTLLYWLRWL*
Ga0114129_104248353	3300009147	Populus Rhizosphere	LEYDDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVLHPSGTLLYWLRWL*
Ga0075423_100775714	3300009162	Populus Rhizosphere	EAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0075423_101312873	3300009162	Populus Rhizosphere	LDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVIHPTGTLLYWLRWL*
Ga0105241_120656061	3300009174	Corn Rhizosphere	AGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0134111_103749491	3300010329	Grasslands Soil	VVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHIEPDKLSFDVRDHCVVHPSGALLYWLRWL*
Ga0134124_107721161	3300010397	Terrestrial Soil	LDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDPRAFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL*
Ga0134121_124086632	3300010401	Terrestrial Soil	LDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDRRAFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVVHPTG
Ga0134123_113658802	3300010403	Terrestrial Soil	LDYQEFKDVVRQAGERRVAQGGLVPIPELRRQVPALDRQSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHQSGTLLYWLRWL*
Ga0137463_13476611	3300011444	Soil	LDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDPRAFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVIHPTGTLLYWLRWL*
Ga0137388_115286441	3300012189	Vadose Zone Soil	LPDGELRVDYDDFKQVVREAGERRVAQGGLVPIPELRRQCASLDRQAFDTFLLTLHREGAIHVLSHVEADKLSAAIREQCVVHSSGALLYWLRWL*
Ga0137365_105092932	3300012201	Vadose Zone Soil	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGALLYWLRWL*
Ga0137374_103669432	3300012204	Vadose Zone Soil	PDGERSLEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSEVRDHCVVHPSGTLLYWLRWL*
Ga0137369_100922613	3300012355	Vadose Zone Soil	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSEVRDHCVVHPSGTLLYWLRWL*
Ga0137375_100171876	3300012360	Vadose Zone Soil	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0150984_1160035331	3300012469	Avena Fatua Rhizosphere	LPDGELRLDYDAFKQVVREAGERRVAQGGLVPIPELRRQVPALNRGAFDSFVLTLHREGSVHLLSHVEPHKLSSEVRDQCVVHPTGAVLYWLRWL*
Ga0157318_10116291	3300012482	Arabidopsis Rhizosphere	RSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0137397_104322062	3300012685	Vadose Zone Soil	LDYESFKDVVRQAGERRVAQGGLVPIPELRRQVPALDHRSFDDYVLALHREGAIHLLSHVEPDKLSSDVREHCVVHPSGALLYWLRWL*
Ga0157288_102718141	3300012901	Soil	TERLRPPAQGDGLPDGERNLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0157289_102209911	3300012903	Soil	GERNLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0157282_103074821	3300012904	Soil	LDYESFKDVVRQAGERRVAQGGLVPIPELRRQVAALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0157296_101608852	3300012905	Soil	LDYESFKDVVRQAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0157308_100293651	3300012910	Soil	LDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0137394_104228882	3300012922	Vadose Zone Soil	LEYEEFKRVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVREHCVVHPSGALLYWLRWL*
Ga0137394_106721562	3300012922	Vadose Zone Soil	LDYESFKDVVRQAGERRVAQGGLVPIPELRRQVPALDHRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVMHPTGTLLYWLRWL*
Ga0137404_118242811	3300012929	Vadose Zone Soil	LEYEDFKRVVREAGERRAAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL*
Ga0157380_104009681	3300014326	Switchgrass Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLL
Ga0157377_101710432	3300014745	Miscanthus Rhizosphere	LDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0137409_105796602	3300015245	Vadose Zone Soil	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDPRSFDDYVLALHREGAIHLLSHVEPDKLSSEVREHCVVHPSGTLLYWLRWL*
Ga0132258_134635012	3300015371	Arabidopsis Rhizosphere	LPPAHGDGLPDGERILDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVRDQCVFHHTGTLLYWLRWL*
Ga0132258_136045302	3300015371	Arabidopsis Rhizosphere	MDGGGDLPRRASRVRVNGELRGDYQDFKRVVREAGESRAAQGGLVPIPELRRYCPGLDRGAFDDFVLALHREGAIHLLSHVEVDKLSEAVRDECVPHPSGTLLYWLRWL*
Ga0132256_1019797472	3300015372	Arabidopsis Rhizosphere	DGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL*
Ga0132257_1006902802	3300015373	Arabidopsis Rhizosphere	VAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL*
Ga0132255_1032341002	3300015374	Arabidopsis Rhizosphere	LPPAHGDGLPDGERILDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPAKLASDVRDQCVFHHTGTLLYWLRWL*
Ga0184624_105383501	3300018073	Groundwater Sediment	PDGERRLDYDEFKVFVREAGERRVAQGGLVPIPELRRSVPALDRRAFDDFVLALHREGQIHLLSHVEPDKLSEQIRGECVVHSSGTLLYWLRWL
Ga0184609_101099832	3300018076	Groundwater Sediment	LDYEAFKDVVRQAGERRVAQGGLVPLPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVRDQCVFHPSGTLLYWLRWL
Ga0184628_103759631	3300018083	Groundwater Sediment	LPDGVQRLDYDEFKDLVREAGERRVAQGGLVPIPELRRQIPALDRSAFDDFVFALHRDGQVHLLSHVEPDKLSEEVRAECVVHSSGTLLYWLRWL
Ga0190272_125653591	3300018429	Soil	VLISTDGGPVRERWPLPDGERRLDYTEFKHVVREAGERHIAQGGLVPIPELRRQVPALDRQAFDDFVLALHREGSIHLLSHVEPDKLSADVRAQC
Ga0173479_102875312	3300019362	Soil	LPDGERSLDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDPMAFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL
Ga0193731_10415292	3300020001	Soil	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVLHPSGALLYWLRWL
Ga0224452_12333042	3300022534	Groundwater Sediment	LLPDGERSLEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGALLYWLRWL
Ga0222622_101780002	3300022756	Groundwater Sediment	MEWTQAHFHGAARMPPRERRLLPDGERSLEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVRDHCVVHPSGALLYWLRWL
Ga0222622_105741762	3300022756	Groundwater Sediment	LDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDRRAFDDYVLTLHREGAIHLLSHVEPDKLASDVREQCVVHPTGTLLYWLRWL
Ga0207642_100142332	3300025899	Miscanthus Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207680_106063752	3300025903	Switchgrass Rhizosphere	AQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207649_103723252	3300025920	Corn Rhizosphere	LPDGERSLDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL
Ga0207690_102827802	3300025932	Corn Rhizosphere	LDYESFKHVVRKAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207670_104132111	3300025936	Switchgrass Rhizosphere	SRSGSRPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207670_111873701	3300025936	Switchgrass Rhizosphere	LPDGERSLNYEEFKDVVRQAGERRVAQGGLVPLPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL
Ga0207689_100318632	3300025942	Miscanthus Rhizosphere	LPDGERSLDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDPRAFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL
Ga0207679_103809213	3300025945	Corn Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL
Ga0207668_103436501	3300025972	Switchgrass Rhizosphere	SFFTERLWPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207640_101708691	3300025981	Corn Rhizosphere	GAAFWPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207640_102916842	3300025981	Corn Rhizosphere	LPDGERTLDYQEFKDVVRQAGERRVAQGGLVPIPELRRQVPALDRQSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHQSGTLLYWLRWL
Ga0207658_100547151	3300025986	Switchgrass Rhizosphere	KTLAHFSRSGSRPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207677_115127112	3300026023	Miscanthus Rhizosphere	LPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0207708_104772701	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL
Ga0207641_101067841	3300026088	Switchgrass Rhizosphere	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDPRAFDDYVLALHREGAIHLLSHVEPDKLASDIREQCVVHPTGTLLYWLRWL
Ga0207683_100333391	3300026121	Miscanthus Rhizosphere	SRPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0209240_10120544	3300026304	Grasslands Soil	LEYEDFKRVVREAGERRVAQGGLGPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGTLLYWLRWL
Ga0209472_11516102	3300026323	Soil	LDYEAFKDVVREAGERRAAQGGLVPIPELRRQVPTLDREAFDAFVLALHREGSIHLLSHVEPDKLSAQIREQCVIHPSGALLYWLRWL
Ga0209802_10811212	3300026328	Soil	VDYEDFKRVVRENGERRVAQGGLVPIPELRRQCPSLDRQAFDAFVLTLHREGAVHLLSHVESDKLSEAIREQCVVHSTGTLLYWLRWL
Ga0209161_101506571	3300026548	Soil	LPDGEPQLEYDDFKRHVREAAERRAAQGGLVAIPELRRQCPTRDAREFDQYILALHREGAIHLLSHVEPDKLPDDVRDQCVVHPSGALLYWLRWLEERPGD
Ga0209382_1000406419	3300027909	Populus Rhizosphere	LPDGERRLDYEAFKHVVREAGERRAAQGGLVPIPELRRQIPTLDPRAFDDYVLALHREGAIHLLSHVEPDKLSSDVRQQCVVHQSGTLLYWLRWL
Ga0209382_101570432	3300027909	Populus Rhizosphere	LPDGERSLDYQEFKDVVRQAGERRVAQGGLVPIPELRRQIPALDRRSFDDYVLTLHREGAIHLLSHVEPDKLSSDVREQCVAHPSGALLYWLRWL
Ga0209382_103243483	3300027909	Populus Rhizosphere	LEYEDFKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLSSDVRDHCVVHPSGALLYWLRWL
Ga0268265_101481831	3300028380	Switchgrass Rhizosphere	IFHGAAFWPPAQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0307302_105729422	3300028814	Soil	LPYGERSLDYEAFKDVVRQAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVRDQCVFHPSG
Ga0307296_103515912	3300028819	Soil	FKRVVREAGERRVAQGGLVPIPELRRQVPTLDRRSFDDYVLALHREGAIHLLSHVEPDKLASDVRDHCVVHPSGALLYWLRWL
Ga0307312_111096021	3300028828	Soil	LPDGERSLDYEAFKHVVRQAGERRVAQGGLVPIPELRRQVPALDRRAFDDYVLTLHREGAIHLLSHVEPDKLASDVREQCVVHPTGTLLYWLRWL
Ga0307497_101118792	3300031226	Soil	LDYESFKHVVREAGERRVAQGGLVPIPELRRQIPALDHRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVLHPTGTLLYWLRWL
Ga0307506_103813651	3300031366	Soil	LPDGERSLDYESFKDVVRQAGERRVAQGGLVPIPELRRQIPALDHRSFDDYVLALHREGAIHLLSHVEPDKLASDVREQCVLHPTGTLLYWLRWL
Ga0310886_102680032	3300031562	Soil	LDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQC
Ga0310900_102084481	3300031908	Soil	RVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0310884_106640961	3300031944	Soil	AQGDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0310906_104214672	3300032013	Soil	GDGLPDGERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0307471_1028568042	3300032180	Hardwood Forest Soil	GERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHSTGTLLYWLRWL
Ga0310896_109338952	3300032211	Soil	ERSLDYESFKHVVREAGERRVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGAIHLLSHVEPHKLASDVREQCVVHPTGTLLYWLRWL
Ga0364945_0168896_442_660	3300034115	Sediment	RVAQGGLVPIPELRRQVPALDRRSFDDYVLALHREGVIHLLSHVEPDKLSSDVRDQCVVHPSGALLYWLRWL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056113

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences