Metagenome / Metatranscriptome Family F056109

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056109
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	50 residues
Representative Sequence	MKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR
Number of Associated Samples	103
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.70 %
% of genes near scaffold ends (potentially truncated)	25.36 %
% of genes from short scaffolds (< 2000 bps)	87.68 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.507 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (19.565 % of family members)
Environment Ontology (ENVO)	Unclassified (27.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.38% β-sheet: 0.00% Coil/Unstructured: 76.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF05532	CsbD	33.33
PF01968	Hydantoinase_A	9.42
PF05378	Hydant_A_N	4.35
PF09243	Rsm22	1.45
PF13426	PAS_9	1.45
PF00800	PDT	1.45
PF00005	ABC_tran	1.45
PF13807	GNVR	0.72
PF02190	LON_substr_bdg	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	33.33
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	8.70
COG0077	Prephenate dehydratase	Amino acid transport and metabolism [E]	1.45
COG5459	Ribosomal protein RSM22 (predicted mitochondrial rRNA methylase)	Translation, ribosomal structure and biogenesis [J]	1.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.51 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.51 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.51 %
Unclassified	root	N/A	14.49 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.35 %
Unclassified	root	N/A	14.49 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.22 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.49 %
Unclassified	root	N/A	14.49 %
Chlamydiae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.49 %
Unclassified	root	N/A	14.49 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.04 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	2.17 %
Chlamydiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.49 %
Unclassified	root	N/A	14.49 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.04 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	2.17 %
Parachlamydiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.49 %
Unclassified	root	N/A	14.49 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.25 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.17 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.45 %
Parachlamydiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.49 %
Unclassified	root	N/A	14.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.35 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.17 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Parachlamydia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae → Parachlamydia	0.72 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.49 %
Unclassified	root	N/A	14.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.35 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.17 %
unclassified Parachlamydia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae → Parachlamydia → unclassified Parachlamydia	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.49 %
Unclassified	root	N/A	14.49 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.35 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2.17 %
Parachlamydia sp. C2	species	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae → Parachlamydia → unclassified Parachlamydia → Parachlamydia sp. C2	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01BOJN7	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300001305\|C688J14111_10004548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3809	Open in IMG/M
3300002568\|C688J35102_120861729	Not Available	1872	Open in IMG/M
3300002906\|JGI25614J43888_10034785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1578	Open in IMG/M
3300002914\|JGI25617J43924_10098324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300005167\|Ga0066672_10937146	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300005338\|Ga0068868_100628586	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005344\|Ga0070661_101870929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005345\|Ga0070692_10544708	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300005434\|Ga0070709_10133123	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300005434\|Ga0070709_11024385	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300005434\|Ga0070709_11088803	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300005434\|Ga0070709_11504878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005435\|Ga0070714_100376636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300005435\|Ga0070714_100605323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300005436\|Ga0070713_100050672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3430	Open in IMG/M
3300005436\|Ga0070713_100092948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2598	Open in IMG/M
3300005436\|Ga0070713_100668116	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005436\|Ga0070713_102123648	Not Available	544	Open in IMG/M
3300005437\|Ga0070710_10357259	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300005437\|Ga0070710_11338023	Not Available	534	Open in IMG/M
3300005439\|Ga0070711_100034375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3381	Open in IMG/M
3300005439\|Ga0070711_101221454	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005439\|Ga0070711_101567634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300005458\|Ga0070681_10506289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1121	Open in IMG/M
3300005458\|Ga0070681_11719061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300005458\|Ga0070681_11940453	Not Available	516	Open in IMG/M
3300005518\|Ga0070699_100378973	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005533\|Ga0070734_10001159	All Organisms → cellular organisms → Bacteria	41254	Open in IMG/M
3300005533\|Ga0070734_10299821	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	919	Open in IMG/M
3300005542\|Ga0070732_10023629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3474	Open in IMG/M
3300005542\|Ga0070732_10025928	All Organisms → cellular organisms → Bacteria	3322	Open in IMG/M
3300005542\|Ga0070732_11034969	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300005575\|Ga0066702_10391191	Not Available	847	Open in IMG/M
3300005575\|Ga0066702_10686650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300005587\|Ga0066654_10196125	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1047	Open in IMG/M
3300005614\|Ga0068856_102607865	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300005712\|Ga0070764_11114935	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300006028\|Ga0070717_10271134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	1503	Open in IMG/M
3300006028\|Ga0070717_10767300	Not Available	877	Open in IMG/M
3300006041\|Ga0075023_100057956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1234	Open in IMG/M
3300006050\|Ga0075028_100299831	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300006163\|Ga0070715_10343550	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006175\|Ga0070712_101233975	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006903\|Ga0075426_10173648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1559	Open in IMG/M
3300006914\|Ga0075436_101429762	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300006954\|Ga0079219_10336402	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300006954\|Ga0079219_10416874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	899	Open in IMG/M
3300006954\|Ga0079219_12088596	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300009088\|Ga0099830_10722845	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300009093\|Ga0105240_10094521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3646	Open in IMG/M
3300009093\|Ga0105240_11254826	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300009098\|Ga0105245_11765033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300009551\|Ga0105238_10247865	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300010359\|Ga0126376_11321618	Not Available	742	Open in IMG/M
3300010359\|Ga0126376_13267096	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300010371\|Ga0134125_11026441	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300010373\|Ga0134128_10544894	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300010373\|Ga0134128_11261156	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300010373\|Ga0134128_13182231	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300010375\|Ga0105239_11003251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300010375\|Ga0105239_13021641	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300010376\|Ga0126381_101871238	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300010396\|Ga0134126_10653462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300010398\|Ga0126383_10642399	Not Available	1136	Open in IMG/M
3300010399\|Ga0134127_10998974	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300012205\|Ga0137362_11426147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012206\|Ga0137380_11113594	All Organisms → cellular organisms → Bacteria → Acidobacteria	672	Open in IMG/M
3300012212\|Ga0150985_107664669	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300012363\|Ga0137390_10437538	All Organisms → cellular organisms → Bacteria → PVC group → Chlamydiae → Chlamydiia → Parachlamydiales → Parachlamydiaceae → Parachlamydia → unclassified Parachlamydia → Parachlamydia sp. C2	1284	Open in IMG/M
3300012683\|Ga0137398_10129791	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300012685\|Ga0137397_10949331	Not Available	636	Open in IMG/M
3300012917\|Ga0137395_10002548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8816	Open in IMG/M
3300012925\|Ga0137419_11648275	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300012929\|Ga0137404_10361486	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300012931\|Ga0153915_10196270	All Organisms → cellular organisms → Bacteria	2212	Open in IMG/M
3300012955\|Ga0164298_10031381	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300012957\|Ga0164303_11296217	Not Available	539	Open in IMG/M
3300012960\|Ga0164301_10175354	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300012984\|Ga0164309_10337980	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300012984\|Ga0164309_11104724	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012985\|Ga0164308_10289378	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300012985\|Ga0164308_11719330	Not Available	582	Open in IMG/M
3300012986\|Ga0164304_11746926	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300012988\|Ga0164306_10062408	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300012988\|Ga0164306_11114626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300013296\|Ga0157374_12025893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300013297\|Ga0157378_10178561	Not Available	1996	Open in IMG/M
3300015242\|Ga0137412_10423208	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300018431\|Ga0066655_10950360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300018431\|Ga0066655_11033283	Not Available	570	Open in IMG/M
3300019999\|Ga0193718_1012349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1879	Open in IMG/M
3300020077\|Ga0206351_10993430	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300020579\|Ga0210407_10276107	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300021170\|Ga0210400_10049635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	3266	Open in IMG/M
3300021403\|Ga0210397_10123173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1781	Open in IMG/M
3300021404\|Ga0210389_10978650	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300021432\|Ga0210384_10000291	All Organisms → cellular organisms → Bacteria → Acidobacteria	78913	Open in IMG/M
3300021445\|Ga0182009_10419775	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300021560\|Ga0126371_11219182	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300022467\|Ga0224712_10276282	Not Available	781	Open in IMG/M
3300024288\|Ga0179589_10188076	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300025905\|Ga0207685_10383665	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300025906\|Ga0207699_11021747	Not Available	611	Open in IMG/M
3300025912\|Ga0207707_10498043	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300025912\|Ga0207707_10823237	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300025913\|Ga0207695_10500736	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300025915\|Ga0207693_10433805	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300025915\|Ga0207693_11046025	Not Available	622	Open in IMG/M
3300025915\|Ga0207693_11261061	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300025917\|Ga0207660_10789031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300025921\|Ga0207652_10402886	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300025927\|Ga0207687_10377537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300025928\|Ga0207700_10245603	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300025928\|Ga0207700_10398043	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300025939\|Ga0207665_11266767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300026281\|Ga0209863_10210441	Not Available	562	Open in IMG/M
3300026319\|Ga0209647_1005652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9101	Open in IMG/M
3300026527\|Ga0209059_1051747	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300026557\|Ga0179587_11023351	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300027517\|Ga0209113_1039602	Not Available	673	Open in IMG/M
3300027574\|Ga0208982_1117614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027583\|Ga0209527_1041911	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027826\|Ga0209060_10002226	All Organisms → cellular organisms → Bacteria	18511	Open in IMG/M
3300027826\|Ga0209060_10480581	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300027842\|Ga0209580_10126362	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300027842\|Ga0209580_10143457	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300027842\|Ga0209580_10184334	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300027857\|Ga0209166_10014999	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4928	Open in IMG/M
3300027910\|Ga0209583_10240928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	793	Open in IMG/M
3300028536\|Ga0137415_11123651	Not Available	599	Open in IMG/M
3300028800\|Ga0265338_10453157	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300030974\|Ga0075371_11456398	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300031057\|Ga0170834_104397865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300031128\|Ga0170823_10196634	Not Available	554	Open in IMG/M
3300031469\|Ga0170819_12639974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300031716\|Ga0310813_11272657	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300031962\|Ga0307479_10236697	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.68%
Host-Associated	Host-Associated	12.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.78%
Plants	Host-Associated → Plants	12.32%
Aquatic	Environmental → Aquatic	2.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.14%
Sediment	Environmental → Aquatic → Sediment	2.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Freshwater	Environmental → Aquatic → Freshwater	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.62%
Loam	Environmental → Terrestrial → Soil → Loam	30.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	26.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	19.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.07%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027574	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_00395260	2170459010	Grass Soil	MKTKNMRELEKMWAKKAVEQANSQQKGGAPTRQTVTHAPRTARKSSRGR
C688J14111_100045485	3300001305	Soil	MKTKNMRELEKMWAKKASEQSNPKQKAGAPVRQTPTHTTRAARKSSRGR*
C688J35102_1208617291	3300002568	Soil	KTKNMRELEKMWAKKASEQSNPKQKAGAPVRQTPTHTTRAARKSSRGR*
JGI25614J43888_100347851	3300002906	Grasslands Soil	VKTKNMRELEKMWAKKAAEQSNPKQKTGTPTRQNPTQVTRVPRKSSRGR*
JGI25617J43924_100983242	3300002914	Grasslands Soil	MKTKDMREMEKMWAKKAAEQSNPKQKTSTPTRQSPAHTTRTARKASRGR*
Ga0066672_109371461	3300005167	Soil	MGMKTKNMRELEKMWAKKASEQSNPQKKGTPTRQTPTHTTRTAARKSSRGR*
Ga0068868_1006285862	3300005338	Miscanthus Rhizosphere	MKTKNMRELEKMWAQKAKAQSNPQQKTGAPTRQTVAPAPRITRKSSRGS*
Ga0070661_1018709291	3300005344	Corn Rhizosphere	KNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0070692_105447082	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSNPKQKGGTSTRQAPTHTTRTATRKSSRGR*
Ga0070709_101331232	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAQLWHAYCMKTKNMRELEKMWAKKAVEQSNPQQKSGAPTRQTVTHAPRTARKSSRGR*
Ga0070709_110243852	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRISRKSNRGS*
Ga0070709_110888032	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	HSPLAARLWHAYCMKTKNMRELEKMWAKKAVEQSNPGKKGGAPARQTVTHAPRISRKSNRGS*
Ga0070709_115048782	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGMKTKNMRELEKMWAKKASEQSNPQKKAGTPTRPTVSHAPRISRKSNRGS*
Ga0070714_1003766363	3300005435	Agricultural Soil	MGMKTKNMRELEKMWAKKASEQSNPQKKAGTSTRPTVSHAPRISRKSNRGS*
Ga0070714_1006053232	3300005435	Agricultural Soil	MAQLWHAYCMKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRISRKSNRGS*
Ga0070713_1000506726	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRISRKSNRGS*
Ga0070713_1000929483	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAQLWHAYCMKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVSHAPRISRKSNRGS*
Ga0070713_1006681163	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPPAYGILMGMKTKNMRELEKMWAKKASEQSNPQKKGGAPTRPTVSHAPRISRKSNRGS*
Ga0070713_1021236481	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGMKTKNMRELEKMWAKKASEQSNPQKKGGAPTRPTVSHAPRI
Ga0070710_103572592	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKGGAATRPTVSHAPRISRKSNRGS*
Ga0070710_113380231	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKAVEQANPQQKGGAPTRQTVTHAPRTARKSSRGR*
Ga0070711_1000343753	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LWHAYCMKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR*
Ga0070711_1012214542	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPTRPTVSHAPRISRKSNRGS*
Ga0070711_1015676342	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRISRKSNRGS*
Ga0070681_105062892	3300005458	Corn Rhizosphere	MKTKNMREMEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0070681_117190612	3300005458	Corn Rhizosphere	MPGYGILMCMKTKNMRELEKMWAKKASEQSNPQKKGGAPTRQPVSHAPRISRKSNRGS*
Ga0070681_119404531	3300005458	Corn Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRVAR
Ga0070699_1003789733	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGMKTKNMRELEKMWAKKAAEQSNPQQKAGMPTRQTPTHTTRTAARKSSRGR*
Ga0070734_1000115917	3300005533	Surface Soil	MKTKNMRELEKMWAKKASEQSNPQKKGGAPTRPTVSHAPRISRKSNRGS*
Ga0070734_102998212	3300005533	Surface Soil	MKNKNMREMEKMWAKKAAEQNNPKQKTGAAARQTPTHTVRATRKASRGR*
Ga0070732_100236295	3300005542	Surface Soil	MKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR*
Ga0070732_100259283	3300005542	Surface Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKGGTPTRPTVSHAPRISRKSNRGS*
Ga0070732_110349692	3300005542	Surface Soil	MKNKNMREMEKMWAKKAAEQSDPKQKMGAATRQAPTHTVRATRKASRGR*
Ga0066702_103911913	3300005575	Soil	MKTKNMREMEKMWAKKATEQSNPQKKAGTPARQTVTHAPRTARKASRGR*
Ga0066702_106866502	3300005575	Soil	MKTKNMRELEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0066654_101961252	3300005587	Soil	MKTKNMREMEKMWAKKATEQSNPQKKAGTPVRQTPSHAPRISRKSNRGS*
Ga0068856_1026078652	3300005614	Corn Rhizosphere	MKTKNMRELEKMWAKKAMEQRNPQQKGGAPTRQTVTPAPRIARKSSRGS*
Ga0070764_111149352	3300005712	Soil	MKSKNMREMEKMWAKKAAEQSDPKQKTGAATRQAPTHTVRSTRKASRGR*
Ga0070717_102711342	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGMKTKNMRELEKMWAKKASEQSNPQKKGGAPTRPTVSHAPRISRKSNRGS*
Ga0070717_107673001	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGMKTKNMRELEKMWAQKAKAQSNPQQKGGAPTRQTVAPAPRITRKSSRGS*
Ga0075023_1000579561	3300006041	Watersheds	MKTKNMREMEKMWAKKAAEQSNPRQKTGAAAKQGPSHTTRTARKASRGR*
Ga0075028_1002998312	3300006050	Watersheds	MKTKNMREMEKMWAKKAAEQSKPRQKTGTPARQSPTHTTRTARKASRGQ*
Ga0070715_103435502	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRPAYGILMGMKTKNMRELEKMWAKKASEQSNPQKKAGTPTRPTVSHAPRISRKSNRGS*
Ga0070712_1012339752	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPTRQVPTHTTRAARKSSRGR*
Ga0075426_101736482	3300006903	Populus Rhizosphere	MKTKNMRELEKMWAKKAVEQSNPQQKTGAPTRQTVTHAPRTARKSSRGR*
Ga0075436_1014297621	3300006914	Populus Rhizosphere	KKAVEQSNPQQKTGAPTRQTVTHAPRTARKSSRGR*
Ga0079219_103364022	3300006954	Agricultural Soil	MKTKNMRELEKMWAKKAVEQSNPGKKGGAPARQTVTHAPRIARKSSRGS*
Ga0079219_104168741	3300006954	Agricultural Soil	MKTKNMRELEKMWAQKAKAQSNPQQKGGAPTRQTVAPAPRITRKSSR
Ga0079219_120885961	3300006954	Agricultural Soil	MRELEKMWAKKAVEQSNPQQKTGAPTRQTVTHAPRTARKSSRGR*
Ga0099830_107228452	3300009088	Vadose Zone Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKTGTPTRQSPTHTTRTARKASRGR*
Ga0105240_100945215	3300009093	Corn Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0105240_112548261	3300009093	Corn Rhizosphere	LERQDYGILICMKTKNMRELEKMWAKKASEQSNPQKKAGTPTRPTVSHAPRISRKSNRGS
Ga0105245_117650331	3300009098	Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSKPQQKGGAPTRQPVSHAPRISRKSNRGS*
Ga0105238_102478653	3300009551	Corn Rhizosphere	MGMKTKNMRELEKMWAKKASEQSNPQKKGGAPARPTVSHAPRISRKSNRGS*
Ga0126376_113216182	3300010359	Tropical Forest Soil	MKTKNMRELEKMWAQKAKAQSNPQQKTGAPTRQTTTPAPRIARKSSRGS*
Ga0126376_132670961	3300010359	Tropical Forest Soil	LEKMWAQKAKAQSNPQQKTGAPTRQTTTPPPRIARKSSRGS*
Ga0134125_110264412	3300010371	Terrestrial Soil	MKTKNMRELEKMWAKKAAEQSNPQQKGGAPTRQTPTHTTRPAARKSSRGR*
Ga0134128_105448943	3300010373	Terrestrial Soil	MYHQSDSPYVACLWHPYGMKTKNMRELEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0134128_112611562	3300010373	Terrestrial Soil	YGILMCMKTKNMRELEKMWAQKAKAQSNPQQKTGAPTRQTVAPAPRITRKSSRGS*
Ga0134128_131822312	3300010373	Terrestrial Soil	MKTKNMRELEKMWAKKASEQSNPQKKAGTSTRQTPTHTTRTAARKSSRGR*
Ga0105239_110032512	3300010375	Corn Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKVGAPARPTVSHAPRISRKSNRGS*
Ga0105239_130216412	3300010375	Corn Rhizosphere	MRPAYGILIGMKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0126381_1018712382	3300010376	Tropical Forest Soil	MLIGMKTKNMRELEKMWAKKAMEQGNPKQKGGAPTRQTVAPAPRIARKSSRGS*
Ga0134126_106534622	3300010396	Terrestrial Soil	MWPAYGILIGMKTKNMRELEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR*
Ga0126383_106423991	3300010398	Tropical Forest Soil	MLIGMKTKNMRELEKMWAQKAKAQSNPQQKGGAPTRQPAAPAPRIARKSSRGS*
Ga0134127_109989742	3300010399	Terrestrial Soil	MKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRVARKSSRGR*
Ga0137362_114261472	3300012205	Vadose Zone Soil	MKTKNMREMQKMWAKKASEQSNPQQKAGTPTRQSPTHTTRTARKASRGR*
Ga0137380_111135941	3300012206	Vadose Zone Soil	MKTKNMRELVKMWAKKAVEQSNPQQKTGAPTRQTVTHAPRTARKSSRGR*
Ga0150985_1076646692	3300012212	Avena Fatua Rhizosphere	MGMKTKNMRELEKMWAKKASEQSNPQKKAGTPTRQPVSHAPRISRKSNRGS*
Ga0137390_104375382	3300012363	Vadose Zone Soil	MKTKDMREMEKMWAKKAAEQSNPKQKTSTPTRQSPAHATRTARKASRGR*
Ga0137398_101297913	3300012683	Vadose Zone Soil	MDMKTKNMRELEKMWAKKASEQSNPQQKTGTPTRQSPTHTTRTARKASRGR*
Ga0137397_109493312	3300012685	Vadose Zone Soil	MKTKNMRELEKMWAKKASEQSNPQKKAGTPMRQAPTHTTRAARK
Ga0137395_100025483	3300012917	Vadose Zone Soil	VKTKNMRELEKMWAKKAAEQSNSKQKTGTPTRQNPTQVTRVPRKSSRGR*
Ga0137419_116482751	3300012925	Vadose Zone Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKAGTPTRQSPTHTTRTARKASRGR*
Ga0137404_103614862	3300012929	Vadose Zone Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKTATPTRQSPSHTTRTARKASRGR*
Ga0153915_101962704	3300012931	Freshwater Wetlands	MKTKNMRELEKMWAKKAVEQSKPQQKTGAPTRQTVTHAPRTARKSSRGR*
Ga0164298_100313813	3300012955	Soil	MGMKTKNMRELEKMWAKKASEQSNPQKKAGTPMRQTPTHTTRAARKSSRGR*
Ga0164303_112962172	3300012957	Soil	MLKGMKTKNMREMEKMWAKKAAEQNNPRLKTGAPTRQSATPAPRIARKSSRGS*
Ga0164301_101753542	3300012960	Soil	MAQLWHAYCMKTKNMRELETMWAKKAVEQSNPQQKSGAPTRQTVTHAPRTARKSSRGR*
Ga0164309_103379802	3300012984	Soil	MKTKNMRELEKMWAKKASEQSNPQKKAGTSTRPTVSHAPRISRKSNRGS*
Ga0164309_111047242	3300012984	Soil	MKTKNMRELEKMWAKKAVEQSNPQQKSGAPTRQTVTHAPRTARKSSRGR*
Ga0164308_102893782	3300012985	Soil	MKTKNMRELEKMWAKKAMEQGKPQQKGAAPTRPTVSHAPRISRKSNRGS*
Ga0164308_117193302	3300012985	Soil	MKTKNMRELEKMWAKKASEQSNPQKKAGTSTRQTPTHTTRT
Ga0164304_117469262	3300012986	Soil	MRELEKMWAKKAMEQRNPQQKGGAPTRQTVTPAPRIARKSSRGS*
Ga0164306_100624082	3300012988	Soil	YGILICMKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR*
Ga0164306_111146261	3300012988	Soil	MKTKNMRELEKMWAKKAMEQGKPQQKGGAPTRPTVSHAPRISRKSNRGS*
Ga0157374_120258932	3300013296	Miscanthus Rhizosphere	ELEKMWAKKASEQSNPQKKGGAPARPTVSHAPRISRKSNRGS*
Ga0157378_101785611	3300013297	Miscanthus Rhizosphere	GILMCMKTKNMRELEKMWAQKAKAQSNPQQKTGAPTRQTVAPAPRITRKSSRGS*
Ga0137412_104232083	3300015242	Vadose Zone Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKTGTPTRQSPTHTTRTARKA
Ga0066655_109503602	3300018431	Grasslands Soil	MKTKNMRELEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0066655_110332833	3300018431	Grasslands Soil	MKTKNMREMEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0193718_10123492	3300019999	Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKTGTPTRQSPTHTTRTARKASRGR
Ga0206351_109934301	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MPGYGILMCMKTKNMRELEKMWAKKASEQSNPQKKGGAPTRQPVSHAPRISRKSNRGS
Ga0210407_102761073	3300020579	Soil	MDMKTKNMRELEKMWAKKASEQSNPQQKTGTPTRQSPSHTTRTARKASRGR
Ga0210400_100496354	3300021170	Soil	MDMKTKNMRELEKMWAKKASEQSNPQQKAGTPTRQSPSHTTRTARKASRGR
Ga0210397_101231734	3300021403	Soil	MKSKNMREMEKMWAKKAAEQNDPKQKTGAAARQTPTHTVRATRKASRGR
Ga0210389_109786502	3300021404	Soil	MKSKNMREMEKMWAKKAAEQSDPKQKTGTATRQAPTHTVRATRKASRGR
Ga0210384_1000029137	3300021432	Soil	MKTKDMREMEKMWAKKAAEQSNPKQKTSTPTRQSPAHTTRTARKASRGR
Ga0182009_104197752	3300021445	Soil	MKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR
Ga0126371_112191821	3300021560	Tropical Forest Soil	MKTKNMRELEKMWAQKAKAQSNPQQKGGAPTRQTVAPAPRIARKSSRGS
Ga0224712_102762821	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKQASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0179589_101880762	3300024288	Vadose Zone Soil	MSMKTKNMRELEKIWAKKASEQSNPQQKAGTPTRQSPSHTPRTARKASRGR
Ga0207685_103836652	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	YCMKTKNMRELEKMWAKKAVEQSNPQQKGGAPARQTVTHAPRIARKSSRGS
Ga0207699_110217472	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPTRPTVSHAPRISRKSN
Ga0207707_104980433	3300025912	Corn Rhizosphere	MKTKNMRELEKMWAKKASEQSNPKQKGGTSTRQAPTHTTRTATRKSSRGR
Ga0207707_108232371	3300025912	Corn Rhizosphere	RPAYGILYGMKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRVARKSSRGR
Ga0207695_105007362	3300025913	Corn Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0207693_104338052	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPTRQVPTHTTRAARKSSRGR
Ga0207693_110460251	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTAR
Ga0207693_112610612	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	KMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR
Ga0207660_107890311	3300025917	Corn Rhizosphere	MKTKNMREMEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0207652_104028862	3300025921	Corn Rhizosphere	MKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRVARKSSRGR
Ga0207687_103775372	3300025927	Miscanthus Rhizosphere	MKTKNMRELEKMWAKKASEQSKPQQKGGAPTRQPVSHAPRISRKSNRGS
Ga0207700_102456033	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPPAYGILMGMKTKNMRELEKMWAKKASEQSNPQKKGGAPTRPTVSHAPRISRKSNRGS
Ga0207700_103980432	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRISRKSNRGS
Ga0207665_112667672	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TKNMRELEKMWAKKAVEQSNPQQKSGAPTRQTVTHAPRISRKSNRGS
Ga0209863_102104411	3300026281	Prmafrost Soil	MKTKNTREMEKMWAKKAVEQSKPGQKTSTPTRQSPTHTTRTA
Ga0209647_10056523	3300026319	Grasslands Soil	VKTKNMRELEKMWAKKAAEQSNPKQKTGTPTRQNPTQVTRVPRKSSRGR
Ga0209059_10517472	3300026527	Soil	GMKTKNMRELEKMWAKKATEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0179587_110233512	3300026557	Vadose Zone Soil	DCGILMAMKTKNMRELEKMWAKKASEQSNPQQKPGAPTRQSPAPATRTARKASRGR
Ga0209113_10396022	3300027517	Forest Soil	MKSKNMREMEKHWAKKAAEQNGSQQKGAAATRQPTHNTTRAPRKASRGR
Ga0208982_11176141	3300027574	Forest Soil	MKNKNMREMEKIWAKKAAEQNDPKQKTGAAARQTPTHTTRTTRKASRGR
Ga0209527_10419111	3300027583	Forest Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKAGAPTRQSPAPATRTARKASRGR
Ga0209060_1000222614	3300027826	Surface Soil	MKTKNMRELEKMWAKKASEQSNPQKKGGAPTRPTVSHAPRISRKSNRGS
Ga0209060_104805812	3300027826	Surface Soil	MKNKNMREMEKMWAKKAAEQNNPKQKTGAAARQTPTHTVRATRKASRGR
Ga0209580_101263621	3300027842	Surface Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKGGTPTRPTVSHAPRISRKSNRGS
Ga0209580_101434572	3300027842	Surface Soil	MRPTYGILICMKTKNMRELEKMWAKKAMEQGKPQQKGGAPTRPTVSHAPRISRKSNRGS
Ga0209580_101843341	3300027842	Surface Soil	HSPSIARLWHAYCMKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRTARKSSRGR
Ga0209166_100149992	3300027857	Surface Soil	MKTKNMRELEKMWAKKAVEQSNPQQKTGAPTRQTVTHAPRTARKSSRGR
Ga0209583_102409281	3300027910	Watersheds	MKTKNMREMEKMWAKKAAEQSNPRQKTGAAAKQGPSHTTRTARKASRGR
Ga0137415_111236512	3300028536	Vadose Zone Soil	MGMKTKNMRELEKMWAKKASEQSNPQQKAGTPTRQSPTHTTRTARKASRGR
Ga0265338_104531571	3300028800	Rhizosphere	MKSKNMREMEKMWAKKAAEQANPKQKGAAPTRQAPTHTTRTTRKASRGR
Ga0075371_114563982	3300030974	Soil	MKTKNMRELEKMWAKKASEQSNPQKKAGTPTRQAPTHTTRAARKSSRGR
Ga0170834_1043978652	3300031057	Forest Soil	MDMKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0170823_101966342	3300031128	Forest Soil	MGMKTKNMRELEKMWAKKASEQSNPQKKAGTPTRQAPTHTTR
Ga0170819_126399741	3300031469	Forest Soil	PDYGILMGMKTKNMRELEKMWAKKASEQSNPQKKAGTPVRQTPTHTTRAARKSSRGR
Ga0310813_112726572	3300031716	Soil	MKTKNMRELEKMWAKKAMEQRNPQQKGGAPTRQTVTPAPRIARKSSRGS
Ga0307479_102366975	3300031962	Hardwood Forest Soil	MKTKNMRELEKMWAKKAVEQSNPQQKGGAPTRQTVTHAPRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056109

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences