NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F056087

Metagenome Family F056087

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056087
Family Type Metagenome
Number of Sequences 138
Average Sequence Length 42 residues
Representative Sequence ANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Number of Associated Samples 120
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 11.03 %
% of genes near scaffold ends (potentially truncated) 85.51 %
% of genes from short scaffolds (< 2000 bps) 83.33 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.580 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(10.870 % of family members)
Environment Ontology (ENVO) Unclassified
(37.681 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.826 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.79%    β-sheet: 0.00%    Coil/Unstructured: 58.21%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF05016ParE_toxin 34.06
PF00069Pkinase 3.62
PF04255DUF433 2.17
PF01329Pterin_4a 2.17
PF03781FGE-sulfatase 2.17
PF02661Fic 2.17
PF01174SNO 2.17
PF01695IstB_IS21 2.17
PF05977MFS_3 1.45
PF15919HicB_lk_antitox 1.45
PF01326PPDK_N 1.45
PF07690MFS_1 1.45
PF01624MutS_I 1.45
PF04365BrnT_toxin 0.72
PF02812ELFV_dehydrog_N 0.72
PF00873ACR_tran 0.72
PF02922CBM_48 0.72
PF13354Beta-lactamase2 0.72
PF14559TPR_19 0.72
PF14903WG_beta_rep 0.72
PF00208ELFV_dehydrog 0.72
PF00589Phage_integrase 0.72
PF01850PIN 0.72
PF01467CTP_transf_like 0.72
PF02683DsbD 0.72
PF12852Cupin_6 0.72
PF13175AAA_15 0.72
PF01712dNK 0.72
PF02517Rce1-like 0.72
PF09899DUF2126 0.72
PF04014MazE_antitoxin 0.72
PF07927HicA_toxin 0.72
PF03725RNase_PH_C 0.72
PF03683UPF0175 0.72
PF05154TM2 0.72
PF00312Ribosomal_S15 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 14.49
COG0118Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisHAmino acid transport and metabolism [E] 2.17
COG0311Pyridoxal 5'-phosphate synthase subunit PdxT (glutamine amidotransferase)Coenzyme transport and metabolism [H] 2.17
COG1262Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domainPosttranslational modification, protein turnover, chaperones [O] 2.17
COG1484DNA replication protein DnaCReplication, recombination and repair [L] 2.17
COG2154Pterin-4a-carbinolamine dehydrataseCoenzyme transport and metabolism [H] 2.17
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 2.17
COG0249DNA mismatch repair ATPase MutSReplication, recombination and repair [L] 1.45
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 1.45
COG0574Phosphoenolpyruvate synthase/pyruvate phosphate dikinaseCarbohydrate transport and metabolism [G] 1.45
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 1.45
COG0184Ribosomal protein S15P/S13ETranslation, ribosomal structure and biogenesis [J] 0.72
COG0689Ribonuclease PHTranslation, ribosomal structure and biogenesis [J] 0.72
COG1185Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)Translation, ribosomal structure and biogenesis [J] 0.72
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.72
COG1428Deoxyadenosine/deoxycytidine kinaseNucleotide transport and metabolism [F] 0.72
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.72
COG2123Exosome complex RNA-binding protein Rrp42, RNase PH superfamilyIntracellular trafficking, secretion, and vesicular transport [U] 0.72
COG2314Uncharacterized membrane protein YozV, TM2 domain, contains pTyrGeneral function prediction only [R] 0.72
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 0.72
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 0.72
COG2929Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin systemDefense mechanisms [V] 0.72
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.72


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.58 %
UnclassifiedrootN/A9.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004091|Ga0062387_100149854All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1341Open in IMG/M
3300004092|Ga0062389_100545873All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1315Open in IMG/M
3300005437|Ga0070710_11416916All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae520Open in IMG/M
3300005468|Ga0070707_101066125All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300005541|Ga0070733_10492330All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter820Open in IMG/M
3300005554|Ga0066661_10512528All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium723Open in IMG/M
3300005560|Ga0066670_10505536All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae742Open in IMG/M
3300005569|Ga0066705_10124601All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1558Open in IMG/M
3300005569|Ga0066705_10742317All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae589Open in IMG/M
3300005904|Ga0075280_10064400All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter717Open in IMG/M
3300006102|Ga0075015_100281295All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae910Open in IMG/M
3300006163|Ga0070715_10948644All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300006173|Ga0070716_101215559All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300006174|Ga0075014_100685457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300006176|Ga0070765_100483150Not Available1163Open in IMG/M
3300006176|Ga0070765_100800733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium890Open in IMG/M
3300006794|Ga0066658_10012439All Organisms → cellular organisms → Bacteria3172Open in IMG/M
3300006800|Ga0066660_10453414All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1072Open in IMG/M
3300006893|Ga0073928_11187021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium514Open in IMG/M
3300007076|Ga0075435_100168424All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1848Open in IMG/M
3300009029|Ga0066793_10174477All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300009038|Ga0099829_11008550All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300009088|Ga0099830_11378812All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300009090|Ga0099827_11542701All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300009521|Ga0116222_1127483All Organisms → cellular organisms → Bacteria → Acidobacteria1096Open in IMG/M
3300009523|Ga0116221_1037165All Organisms → cellular organisms → Bacteria2353Open in IMG/M
3300009523|Ga0116221_1424138All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans580Open in IMG/M
3300009524|Ga0116225_1416182All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300009548|Ga0116107_1003121All Organisms → cellular organisms → Bacteria8320Open in IMG/M
3300009548|Ga0116107_1005105All Organisms → cellular organisms → Bacteria6102Open in IMG/M
3300009616|Ga0116111_1019473All Organisms → cellular organisms → Bacteria → Acidobacteria2417Open in IMG/M
3300009618|Ga0116127_1094162Not Available794Open in IMG/M
3300009636|Ga0116112_1120640All Organisms → cellular organisms → Bacteria → Acidobacteria735Open in IMG/M
3300009639|Ga0116122_1004623All Organisms → cellular organisms → Bacteria5829Open in IMG/M
3300009665|Ga0116135_1100582All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300009698|Ga0116216_10289475All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300009698|Ga0116216_10564972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium686Open in IMG/M
3300009700|Ga0116217_10758392Not Available599Open in IMG/M
3300009759|Ga0116101_1206885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300009824|Ga0116219_10332681All Organisms → cellular organisms → Bacteria → Acidobacteria853Open in IMG/M
3300010343|Ga0074044_10483901All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300010379|Ga0136449_100299361All Organisms → cellular organisms → Bacteria → Acidobacteria2935Open in IMG/M
3300010379|Ga0136449_102305559Not Available780Open in IMG/M
3300010379|Ga0136449_103476834All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium601Open in IMG/M
3300011120|Ga0150983_12223215All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300011120|Ga0150983_15676552Not Available514Open in IMG/M
3300011269|Ga0137392_11564231All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300012096|Ga0137389_11468154All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300012189|Ga0137388_10097542All Organisms → cellular organisms → Bacteria2518Open in IMG/M
3300012198|Ga0137364_10683777All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300012206|Ga0137380_10972900All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300012210|Ga0137378_10287209All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1530Open in IMG/M
3300012210|Ga0137378_11068744Not Available721Open in IMG/M
3300012353|Ga0137367_10856999All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300012356|Ga0137371_10827770All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300012357|Ga0137384_10984345All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300012923|Ga0137359_10476025All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300012925|Ga0137419_10189529All Organisms → cellular organisms → Bacteria → Acidobacteria1515Open in IMG/M
3300014152|Ga0181533_1257362All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae648Open in IMG/M
3300014492|Ga0182013_10262911All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300014501|Ga0182024_10008363All Organisms → cellular organisms → Bacteria21851Open in IMG/M
3300015193|Ga0167668_1032699All Organisms → cellular organisms → Bacteria1140Open in IMG/M
3300015356|Ga0134073_10333184All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300015359|Ga0134085_10052710All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1630Open in IMG/M
3300017823|Ga0187818_10012825All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3590Open in IMG/M
3300017925|Ga0187856_1158008All Organisms → cellular organisms → Bacteria → Proteobacteria849Open in IMG/M
3300017925|Ga0187856_1203695All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300017929|Ga0187849_1012304All Organisms → cellular organisms → Bacteria5498Open in IMG/M
3300017931|Ga0187877_1103835All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300017934|Ga0187803_10187703All Organisms → cellular organisms → Bacteria → Acidobacteria814Open in IMG/M
3300017938|Ga0187854_10206711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria866Open in IMG/M
3300017938|Ga0187854_10252963All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300017940|Ga0187853_10230499All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8856Open in IMG/M
3300017940|Ga0187853_10333619All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300017947|Ga0187785_10092420All Organisms → cellular organisms → Bacteria → Acidobacteria1199Open in IMG/M
3300017970|Ga0187783_10906539All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300017975|Ga0187782_10330237All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1153Open in IMG/M
3300017975|Ga0187782_10756452All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis750Open in IMG/M
3300017975|Ga0187782_10970577All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium660Open in IMG/M
3300018008|Ga0187888_1213901All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae761Open in IMG/M
3300018016|Ga0187880_1253757All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_38_15774Open in IMG/M
3300018021|Ga0187882_1129126All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300018033|Ga0187867_10097047All Organisms → cellular organisms → Bacteria1721Open in IMG/M
3300018037|Ga0187883_10689181All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300018062|Ga0187784_10560500All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria919Open in IMG/M
3300018086|Ga0187769_11147518All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300018088|Ga0187771_10439975All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300018090|Ga0187770_10556460All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium910Open in IMG/M
3300018090|Ga0187770_11205205All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium612Open in IMG/M
3300018433|Ga0066667_12247003All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300021168|Ga0210406_10275251All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1375Open in IMG/M
3300021402|Ga0210385_10364555All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300021403|Ga0210397_10539263Not Available887Open in IMG/M
3300021477|Ga0210398_11332246All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300021559|Ga0210409_10208022All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1780Open in IMG/M
3300025446|Ga0208038_1002560All Organisms → cellular organisms → Bacteria8380Open in IMG/M
3300025446|Ga0208038_1003841All Organisms → cellular organisms → Bacteria → Proteobacteria6106Open in IMG/M
3300025469|Ga0208687_1012164All Organisms → cellular organisms → Bacteria2614Open in IMG/M
3300025905|Ga0207685_10801852All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300025922|Ga0207646_10629608Not Available962Open in IMG/M
3300025928|Ga0207700_10513710All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300026036|Ga0208650_1025376All Organisms → cellular organisms → Bacteria → Acidobacteria718Open in IMG/M
3300026088|Ga0207641_10871215All Organisms → cellular organisms → Bacteria893Open in IMG/M
3300026305|Ga0209688_1014964All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1484Open in IMG/M
3300026309|Ga0209055_1046831All Organisms → cellular organisms → Bacteria1884Open in IMG/M
3300026343|Ga0209159_1094611All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1312Open in IMG/M
3300026537|Ga0209157_1080808All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1596Open in IMG/M
3300027570|Ga0208043_1108531All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300027795|Ga0209139_10116198All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae944Open in IMG/M
3300027854|Ga0209517_10692423All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300027884|Ga0209275_10231997All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300027905|Ga0209415_10162796All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2207Open in IMG/M
3300027908|Ga0209006_10361358Not Available1229Open in IMG/M
3300028013|Ga0265350_100025All Organisms → cellular organisms → Bacteria3116Open in IMG/M
3300028566|Ga0302147_10228619All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300028678|Ga0302165_10058392All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1020Open in IMG/M
3300028800|Ga0265338_10187044All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1573Open in IMG/M
3300028906|Ga0308309_10679298All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium895Open in IMG/M
3300029953|Ga0311343_10059935All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4664Open in IMG/M
3300030000|Ga0311337_10076904All Organisms → cellular organisms → Bacteria2620Open in IMG/M
3300030520|Ga0311372_11498273All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300030580|Ga0311355_10447095All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300030580|Ga0311355_11681280All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300030618|Ga0311354_11092340Not Available729Open in IMG/M
3300031231|Ga0170824_100336252Not Available627Open in IMG/M
3300031446|Ga0170820_13409459All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300031521|Ga0311364_10088164All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3259Open in IMG/M
3300031754|Ga0307475_11575060All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300031945|Ga0310913_10563421All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300031962|Ga0307479_11845336All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300032160|Ga0311301_11216350All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300032261|Ga0306920_102947158All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300033402|Ga0326728_10011517All Organisms → cellular organisms → Bacteria20126Open in IMG/M
3300033977|Ga0314861_0009279All Organisms → cellular organisms → Bacteria7225Open in IMG/M
3300033977|Ga0314861_0434045All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3571Open in IMG/M
3300034819|Ga0373958_0033743All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1017Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland10.87%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.87%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil10.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.25%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland7.25%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland7.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.35%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.90%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.90%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.17%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.17%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.17%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.45%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.45%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.45%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.45%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.45%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.45%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.72%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.72%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.72%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.72%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.72%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.72%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.72%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.72%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.72%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.72%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005904Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009548Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100EnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009618Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100EnvironmentalOpen in IMG/M
3300009636Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015193Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300017925Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025446Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025469Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026036Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_404 (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026305Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028013Soil microbial communities from Maridalen valley, Oslo, Norway - NSE2EnvironmentalOpen in IMG/M
3300028566Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2EnvironmentalOpen in IMG/M
3300028678Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300030000I_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033977Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062387_10014985413300004091Bog Forest SoilRRLHSLEQELLAAVKGPKIELAVTEIRKKGLIGALRNQTGRR*
Ga0062389_10054587323300004092Bog Forest SoilRQDKERRLHSLEQELLAAVKGPKIELAVTEIRKKGLIGALRNQTGRR*
Ga0070710_1141691623300005437Corn, Switchgrass And Miscanthus RhizosphereMTIRRNKERRLAQLEQELIVAAKGPKIELTVAELRKKGLMAVLRERIP
Ga0070707_10106612523300005468Corn, Switchgrass And Miscanthus RhizosphereKERRLSNLEQELVAAAKGPKIELPIAEIRRKGLIPALRERARKR*
Ga0070733_1049233023300005541Surface SoilRQDKERRLGNLEQELVAAAKGPKIEIPLAEIRRKGLISALRERTRSR*
Ga0066661_1051252813300005554SoilEQELLAAAKGPKIELSISEIRKKGLVTALRERARRA*
Ga0066670_1050553623300005560SoilELLAAAKGPKIEVSIREIRKKGLVTALRERVRRA*
Ga0066705_1012460123300005569SoilMANLEQELLAAAKGPKIEVSIREIRKKGLVTALRERVRRA*
Ga0066705_1074231723300005569SoilQDKERRMTNLEQELLAAAKGPKIEVSISQIRKKGLISALRERARARRA*
Ga0075280_1006440013300005904Rice Paddy SoilLSNLEQELVAAVKGPKIELSVADIRKKGLLRTLRERTQR*
Ga0075015_10028129533300006102WatershedsLGDLEASLVAAANGPKIELSVAEIRRKGLVRALRERTMRR*
Ga0070715_1094864423300006163Corn, Switchgrass And Miscanthus RhizosphereNAALGNLEQELVAAARGATVELSIADIRKKGLLAVLRERTRRK*
Ga0070716_10121555933300006173Corn, Switchgrass And Miscanthus RhizosphereELVAAARGATVELSIADIRKKGLLAVLRERTRRR*
Ga0075014_10068545733300006174WatershedsNLEQDLLAAVKSERIEIPVAEIRKKGLVAALRERAREK*
Ga0070765_10048315033300006176SoilVNLEQELVAAAKGQKIEIPLAEIRRKGLISALRERARGR*
Ga0070765_10080073323300006176SoilERRLGNLEQELVAAAKGPKIEIPLAEIRRKGLISALRERARSR*
Ga0066658_1001243973300006794SoilMANLEQALLAAAKGPKIELSISEIRKKGLVTALRERARRA*
Ga0066660_1045341443300006800SoilLEQELLAAAKGPKIELSISEIRKKGLVTALRERARRA*
Ga0073928_1118702133300006893Iron-Sulfur Acid SpringDKERRLGNLEQDLIAAAKGPKIELPVAEIRKKGLISTLRERARRR*
Ga0075435_10016842433300007076Populus RhizosphereTLENDLVTAAKGPTIEVSLADIRKKGLVAALRDRIRRP*
Ga0066793_1017447713300009029Prmafrost SoilKERRLGNLERELVVAADGPKIEIPVAEIRRKGLIPALRERARRR*
Ga0099829_1100855033300009038Vadose Zone SoilEQELVAAAKGTKIELPVAEIRRKGLITVLRERTRRR*
Ga0099830_1137881213300009088Vadose Zone SoilKERRLGHLEQELIAAAKGPKIEVSLAEIRRKGLIAALREQARRR*
Ga0099827_1154270123300009090Vadose Zone SoilQELMAAHRGARIEISIDEIRKKGLVRALRERAKR*
Ga0116222_112748313300009521Peatlands SoilLRGLERDLLAGLQGEKIEIPVAEIRKKGLVAALREKARRK*
Ga0116221_103716513300009523Peatlands SoilELIRQDKGRRRHTLEQDLSAAAKGSKIEIPVAELRRKGLVAALRDRTQRR*
Ga0116221_142413813300009523Peatlands SoilRRFAELEQGLLQAARGKRLEVPVSEIRKKGLVAALREGIRRR*
Ga0116225_141618233300009524Peatlands SoilDKERRLGNLEQELIAAAKGAKIELRVAEIRQKGLVTVLRERSRRR*
Ga0116107_100312113300009548PeatlandKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR*
Ga0116107_100510513300009548PeatlandKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERGRTR*
Ga0116111_101947313300009616PeatlandNLEQELLAAARGPKIEVSIAEIRKKGLITALRERGRTR*
Ga0116127_109416223300009618PeatlandMANLEQELLAAAKGPKIEVSIAEIRKKELITALRERVRRA*
Ga0116112_112064013300009636PeatlandMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR*
Ga0116122_100462383300009639PeatlandRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR*
Ga0116135_110058213300009665PeatlandNLEQDLLAAARGKKIEVSVADIRKKGLVTALREKARRA*
Ga0116216_1028947513300009698Peatlands SoilNLEQDLLAGVKSGRIEISVAEIRKKGLVGALRERARRK*
Ga0116216_1056497233300009698Peatlands SoilQDKERRLGNLEQELIAAAKGAKIELRVAEIRQKGLVTVLRERSRRR*
Ga0116217_1075839213300009700Peatlands SoilDKSRRLGDLEASLVAAAKGPKIELTVAEIRRKGLVRALRERTMKK*
Ga0116101_120688513300009759PeatlandRQDKERRLGNLEQDLLAAAKGPKIELPIAEIRRKGLIPALRERSRRR*
Ga0116219_1033268123300009824Peatlands SoilRQDKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR*
Ga0074044_1048390113300010343Bog Forest SoilRQDKERRLANLVQDLLAAVKGPKIEVSLREIRNKGLITALRERARRR*
Ga0136449_10029936113300010379Peatlands SoilNLERELVAAARGPKIEIPLAEIRRKGLIPALRERARLR*
Ga0136449_10230555923300010379Peatlands SoilMANLEQELLAAARGPKIEVSIAEIRKKGLITALRE
Ga0136449_10347683423300010379Peatlands SoilRRLGDLEQELVAAAKGPKIEIPLAEIRRKGLIPALRERARRR*
Ga0150983_1222321513300011120Forest SoilQELLAAAKGPKIEVSISEIRKKGLITALRERARRA*
Ga0150983_1567655213300011120Forest SoilDLITAAKGRKIELSVTEIRKKGLVAALRERTRRR*
Ga0137392_1156423123300011269Vadose Zone SoilLSNLEQELIAATKGPKIELSVADVRKKGLLRVLREHKQR*
Ga0137389_1146815413300012096Vadose Zone SoilRLGHLEQELIAAAKGPKIEVSLAEIRRKGLIAALREQARRR*
Ga0137388_1009754213300012189Vadose Zone SoilERRLGNLEQELVAAAKGTKIELPVAEIRRKGLITVLRERTRRR*
Ga0137364_1068377733300012198Vadose Zone SoilTLEAELVEAAKGNKIELSVAEVRRKGLVNVLRERARRK*
Ga0137380_1097290013300012206Vadose Zone SoilERRLGNLEQELIAAAKGRKVEVSIADIRKKGLVAALRERTRR*
Ga0137378_1028720913300012210Vadose Zone SoilNLEQDLITAARGPKIEISVTEIRKKGLVAALRDRTRRK*
Ga0137378_1106874423300012210Vadose Zone SoilLGNLEQELVAAAKGRKIEVSVADIRKKGLMAALRERARLR*
Ga0137367_1085699913300012353Vadose Zone SoilDKERRLGNLEQELLAAAKGKTIEVSLAEIRKKGLIAALRARARRA*
Ga0137371_1082777013300012356Vadose Zone SoilDKERRLGNLEQELITAAKGRKVTIPVAEIRKKGLVTALRERTRR*
Ga0137384_1098434513300012357Vadose Zone SoilQDKERRLGNLERELAAAKGPKIEIRLAEIRRKGFVTAVRERARPP*
Ga0137359_1047602533300012923Vadose Zone SoilKERRLVGLEQELVAAHRGAKIEISIDEIRKKGLVRALRERAKR*
Ga0137419_1018952913300012925Vadose Zone SoilMTNLEQELLAAAKGPKIEVSISQIRKKGLISALRERARRA*
Ga0181533_125736213300014152BogRLGNLEQDLVAAAKGRKIEIPLAEIRRKGLISALRERARRR*
Ga0182013_1026291113300014492BogNLEQELLAATRGPKIEVSIAEIRKKGLITALRERVRTR*
Ga0182024_1000836353300014501PermafrostMANLEQQLLAAVKGPKIEVSISEIRKKGLITALRERARRA*
Ga0167668_103269913300015193Glacier Forefield SoilRRLGDLEASLVAAAKGPKIELSVAEIRRKGLVRVLRERTMKR*
Ga0134073_1033318423300015356Grasslands SoilTNLEQELLAAAKGPKIEVSISQIRKKGLISALRERARARRA*
Ga0134085_1005271033300015359Grasslands SoilEQELLAAAKGPKIEVSIREIRKKGLVTALRERVRRA*
Ga0187818_1001282513300017823Freshwater SedimentRNLEQDLLAGVKGEKIEIPVAEIRKKGLVAALRERARRK
Ga0187856_115800813300017925PeatlandMANLEQELLAAAKGPKIEVSIAEIRKKELITALRERVRRA
Ga0187856_120369523300017925PeatlandRMANLEQELLAAARGPKIELSIAEIRKKGLITVLRERVRTR
Ga0187849_101230413300017929PeatlandKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERGRTR
Ga0187877_110383513300017931PeatlandKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Ga0187803_1018770323300017934Freshwater SedimentNLEQELLAAARGPKIEVSIAAIRKKGLITALRERVQTR
Ga0187854_1020671113300017938PeatlandMANLEQELLAAAKGPKIEVSITEIRKKGLITALRERVRRG
Ga0187854_1025296333300017938PeatlandANLEQELLAAARGPKIEVSIAEIRKKGLITALRERGRTR
Ga0187853_1023049913300017940PeatlandLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Ga0187853_1033361913300017940PeatlandNLEQELLAAARGPKIEVSIAEIRRKGLIAALRERVRTR
Ga0187879_1027313413300017946PeatlandLQSREYVRELIRQDQERRMANLEQELLAAARGPKIEVSIAEIRKKGFITALRERVRTR
Ga0187785_1009242043300017947Tropical PeatlandNLEQELVAAAKGRKIELPVAEIRRKGLVAALRERARRR
Ga0187783_1090653923300017970Tropical PeatlandLEEDLIAATKGPKIELSIAEIRRKGLLTLLRERTRSR
Ga0187782_1033023713300017975Tropical PeatlandKEGRLGNLEQELVAAAKGRKIELPVAEIRRKGLVAALRERARHR
Ga0187782_1075645223300017975Tropical PeatlandLIRQDEERRLASLERELLAAAKGPKTEVPVSAIRKKGLIAALRERVRRP
Ga0187782_1097057733300017975Tropical PeatlandDKERRMANLEQELLAAARGPKIEVPIAEIRKKGLIRALRERVQRR
Ga0187888_121390133300018008PeatlandPSEYVRELIRRDKERRLSNLEQELTAAAKGPKIEIPVDKIRRKGLIAALREHARRR
Ga0187880_125375713300018016PeatlandLEQELLAAAKGPKIEVSIAEIRKKELITALRERVRRA
Ga0187882_112912613300018021PeatlandANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Ga0187867_1009704713300018033PeatlandLHTLEQDLIAAAKGSKIEIPVADLRRKGLVAALRDRTLRR
Ga0187883_1068918123300018037PeatlandDKERRLGDLEHELVAAAKGRKIELPVAEIRRKGLVAVLRERPRGR
Ga0187871_1027362323300018042PeatlandLQSREYVRELIRQDQERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Ga0187784_1056050023300018062Tropical PeatlandMALRSTSREYRLGNLEQELVAAAKGGKIELPVAEIRRKGLVAALRERAHRR
Ga0187769_1114751813300018086Tropical PeatlandRQDKERRLGNLEQELVAAARGPKIEIPLAEIRRKGLIRTLRERSRR
Ga0187771_1043997523300018088Tropical PeatlandMVSKSSSEKRRLGNLEQELVAAAKGKKIELPVAEIRRKGLIAVLRERAHRR
Ga0187770_1055646013300018090Tropical PeatlandLEQELVAAARGPKIEIPLAEIRRKGLIPALRERARRR
Ga0187770_1120520523300018090Tropical PeatlandEQDLIAAARGAKIELPLAEIRRKGLVAVLREQTLRERARRR
Ga0066667_1224700313300018433Grasslands SoilLGNLEQELIAAARGPKIEVSVADIRKKGLVKALRERTRSR
Ga0210406_1027525113300021168SoilMANLEQELLAAAKGPKIEVSISEIRKKGLMTALRERARRA
Ga0210385_1036455533300021402SoilRRLGVLEEELLAASKGRQIEIPLAEIRRKGLIAALRQRARRR
Ga0210397_1053926313300021403SoilDKERRLGNLEQELVAAAKGPKIELSVAAIRKKGLIGALREGTSRR
Ga0210398_1133224613300021477SoilLEQELTAAAKGSKIEISVAEIRRKGLIAALREHARRR
Ga0210409_1020802213300021559SoilLGHLEQELIAAARGPKIEVSLAEIRRKGLLAALREQARRR
Ga0208038_100256013300025446PeatlandQDKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Ga0208038_1003841103300025446PeatlandQDKERRMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERGRTR
Ga0208687_101216413300025469PeatlandMANLEQELLAAARGPKIEVSIAEIRKKGLITALRERVRTR
Ga0207685_1080185223300025905Corn, Switchgrass And Miscanthus RhizosphereGTLEQELLAAVTRSKIEVPISEIRKKGLVAALRERTRRR
Ga0207646_1062960823300025922Corn, Switchgrass And Miscanthus RhizosphereLEQELIAAAKGPKIEVSLAEIRRKGLVAALREQARRR
Ga0207700_1051371043300025928Corn, Switchgrass And Miscanthus RhizosphereEQELLAAAKGPKIEVSLAEIRRKGLIRALRDRARP
Ga0208650_102537633300026036Rice Paddy SoilLSNLEQELVAAVKGPKIELSVADIRKKGLLRTLRERTQR
Ga0207641_1087121523300026088Switchgrass RhizosphereIRSAEEDLVAAAKGPKIEVCVSEIRKKGLMNALRERTRRR
Ga0209688_101496433300026305SoilQDKERRLGNLEQDLIAAARGARIELPVADIRKKGLVPALRARARRK
Ga0209055_104683113300026309SoilNLEQELLAAAKGPKIELSISEIRKKGLVTALRERARRA
Ga0209159_109461133300026343SoilTNLEQELLAAAKGPKIEVSISQIRKKGLISALRERARRA
Ga0209157_108080833300026537SoilLEQELLAAAKGPKIEVSIREIRKKGLVTALRERVRRA
Ga0208043_110853113300027570Peatlands SoilQELIAAAKGAKIELRVAEIRQKGLVTVLRERSRRR
Ga0209139_1011619823300027795Bog Forest SoilRRLHSLEQELLAAVKGPKIELAVTEIRKKGLIGALRNQTGRR
Ga0209517_1069242313300027854Peatlands SoilEQDLLAGVKSEKIEIPVAEIRKKGLVAALRERARRK
Ga0209275_1023199713300027884SoilGHLEQSLVAAAKGQKIEIPVAEIRHKGLISTLRQRARVR
Ga0209415_1016279653300027905Peatlands SoilLRGLERDLLAGLQGEKIEIPVAEIRKKGLVAALREKARRK
Ga0209006_1036135823300027908Forest SoilLIRQDKERRLGNLEKELVAAANGPKIETPVAEIRHKGPIPALRGRARRR
Ga0265350_10002513300028013SoilDKERRLHTLEQDLIAAAKGPKIELAVTEIRKKGLVAALRSQTGRR
Ga0302147_1022861933300028566BogRRMGNLEQDLLAAARGKKIEVSVADIRRKGLVTALREKARRA
Ga0302165_1005839213300028678FenRLGDLEASLVAAAKGPKIELSVAEIRRKGLVRTLRERTMKR
Ga0265338_1018704413300028800RhizosphereRQYKERCLSDLEQELVAAARGRKIEIPVVEIRRKGLVAALRARARRR
Ga0308309_1067929813300028906SoilRRDKERRMANLEQELLAAVKGPKIEVSISEIRKKGLITALRERARRA
Ga0311343_1005993513300029953BogRDKERRLSNLEQELTAAAKGPKIEIPVDEIRRKGLIAALREHARRR
Ga0311337_1007690443300030000FenKARRLGDLEASLVAAAKGPKIELSVAEIRRKGLVRTLRERTMKR
Ga0311372_1149827323300030520PalsaRSLEQELLAGVKSDRIEIPVAEIRKKGLVAALRERARRK
Ga0311355_1044709513300030580PalsaKERRLHSLEQDLIAAAKGPTIELAVTEIRKKGLVAALRSQTGRR
Ga0311355_1168128013300030580PalsaRLRSLEQELLAGVKSDKIEIPVAEIRKKGLVAALRERARRK
Ga0311354_1109234023300030618PalsaKERRLGNLEQELVAAAKGPKIEIPLAEIRRKGLIAALRDHARR
Ga0170824_10033625213300031231Forest SoilHEQELLAAAKGQKIEVSVSEIRKKGLVAALRQHTQRRF
Ga0170820_1340945913300031446Forest SoilLSNLEQELVAAATGPKIELPVAEIRRKGLIPALRERARKR
Ga0311364_1008816443300031521FenRQDKARRLGDLEASLVAAAKGPKIELSVAEIRRKGLVRTLRERTMKR
Ga0307475_1157506013300031754Hardwood Forest SoilLHNLERDLIAAAKGRKIELTVAEVRQKGLVAALRDRTRRR
Ga0310913_1056342113300031945SoilERRLATLEQELLAAARGPKIEVLLSEIRKKGLITALREKARRG
Ga0307479_1184533613300031962Hardwood Forest SoilSSLEQELVAAAMGPKIELPVAEIRRKGLIPALRERARKR
Ga0311301_1121635013300032160Peatlands SoilQDKSRRLGDLEASLVAAAKGPKIELTVAEIRRKGLVRALRERTMKK
Ga0306920_10294715833300032261SoilMANLEQELLSAAKGPKIEVSISEIRKKGLVTALRERVRRV
Ga0326728_10011517123300033402Peat SoilMANLEQELLAAARGPKIELSIAEIRKKGLITALRERVRTR
Ga0314861_0009279_1935_20813300033977PeatlandMFSSKERRMANLEQELPAAARGTKIEVPTAEIRKKGLIRALRERVRRP
Ga0314861_0434045_286_4083300033977PeatlandMANLKQELLAAARGPKIELSISEIRKKGLVRVLRERAQRP
Ga0373958_0033743_890_10153300034819Rhizosphere SoilRLGNLERDLVAAAKGPKIEVSVSEIRKKGLVNALRERTRQR


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