Metagenome / Metatranscriptome Family F055911

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055911
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	47 residues
Representative Sequence	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAG
Number of Associated Samples	96
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	24.64 %
% of genes near scaffold ends (potentially truncated)	98.55 %
% of genes from short scaffolds (< 2000 bps)	84.06 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.957 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.652 % of family members)
Environment Ontology (ENVO)	Unclassified (61.594 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.725 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.89% β-sheet: 0.00% Coil/Unstructured: 31.11%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF05559	DUF763	3.62
PF13495	Phage_int_SAM_4	2.17
PF06186	DUF992	2.17
PF01547	SBP_bac_1	2.17
PF00903	Glyoxalase	1.45
PF13289	SIR2_2	1.45
PF12762	DDE_Tnp_IS1595	1.45
PF06689	zf-C4_ClpX	1.45
PF13683	rve_3	1.45
PF02738	MoCoBD_1	1.45
PF07883	Cupin_2	1.45
PF13737	DDE_Tnp_1_5	1.45
PF01527	HTH_Tnp_1	1.45
PF00497	SBP_bac_3	0.72
PF04471	Mrr_cat	0.72
PF13561	adh_short_C2	0.72
PF01555	N6_N4_Mtase	0.72
PF06725	3D	0.72
PF13489	Methyltransf_23	0.72
PF00078	RVT_1	0.72
PF08281	Sigma70_r4_2	0.72
PF08357	SEFIR	0.72
PF05717	TnpB_IS66	0.72
PF00365	PFK	0.72
PF07859	Abhydrolase_3	0.72
PF00892	EamA	0.72
PF13286	HD_assoc	0.72
PF01243	Putative_PNPOx	0.72
PF16576	HlyD_D23	0.72
PF00118	Cpn60_TCP1	0.72
PF01966	HD	0.72
PF00486	Trans_reg_C	0.72
PF13701	DDE_Tnp_1_4	0.72
PF03150	CCP_MauG	0.72
PF02371	Transposase_20	0.72
PF00005	ABC_tran	0.72
PF09106	SelB-wing_2	0.72
PF00144	Beta-lactamase	0.72
PF01758	SBF	0.72
PF00239	Resolvase	0.72
PF06574	FAD_syn	0.72
PF13650	Asp_protease_2	0.72
PF13181	TPR_8	0.72
PF12681	Glyoxalase_2	0.72
PF13649	Methyltransf_25	0.72
PF01823	MACPF	0.72
PF13676	TIR_2	0.72
PF00202	Aminotran_3	0.72
PF12697	Abhydrolase_6	0.72
PF01648	ACPS	0.72
PF10518	TAT_signal	0.72
PF13924	Lipocalin_5	0.72
PF13419	HAD_2	0.72
PF06155	GBBH-like_N	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	3.62
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.72
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.72
COG3276	Selenocysteine-specific translation elongation factor SelB	Translation, ribosomal structure and biogenesis [J]	0.72
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3536	Uncharacterized conserved protein, DUF971 family	Function unknown [S]	0.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.72
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	0.72
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.72
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.72
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.72
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.42 %
Unclassified	root	N/A	13.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.17 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.33 %
Unclassified	root	N/A	13.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.17 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.14 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8.70 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.07 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.17 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.45 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.07 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.35 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.17 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.72 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.07 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.62 %
Belnapia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia	2.17 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	2.17 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.72 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.72 %
Dankookia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia	0.72 %
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.07 %
Belnapia moabensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	2.17 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2.17 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.72 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.72 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.72 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.04 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.07 %
Belnapia moabensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	2.17 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2.17 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Bradyrhizobium sp. Leo121	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo121	0.72 %
Sphingomonas sp. SRS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	0.72 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.72 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.72 %
Skermanella aerolata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	0.72 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10182308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	850	Open in IMG/M
3300002245\|JGIcombinedJ26739_100198518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1897	Open in IMG/M
3300003219\|JGI26341J46601_10219095	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300004152\|Ga0062386_100901190	Not Available	731	Open in IMG/M
3300006175\|Ga0070712_101533341	Not Available	582	Open in IMG/M
3300006176\|Ga0070765_101727844	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300006755\|Ga0079222_11227983	Not Available	674	Open in IMG/M
3300006755\|Ga0079222_11554337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	624	Open in IMG/M
3300006854\|Ga0075425_102944764	Not Available	522	Open in IMG/M
3300006954\|Ga0079219_12375524	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300007788\|Ga0099795_10320655	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009792\|Ga0126374_10247029	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300010042\|Ga0126314_10266304	All Organisms → cellular organisms → Bacteria → Proteobacteria	1218	Open in IMG/M
3300010046\|Ga0126384_10490036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1057	Open in IMG/M
3300010048\|Ga0126373_12047526	Not Available	635	Open in IMG/M
3300010154\|Ga0127503_10199182	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300010359\|Ga0126376_10220818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1588	Open in IMG/M
3300010362\|Ga0126377_12062758	Not Available	646	Open in IMG/M
3300010376\|Ga0126381_102729074	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300011270\|Ga0137391_10393774	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300011444\|Ga0137463_1188495	Not Available	774	Open in IMG/M
3300012078\|Ga0153999_1064195	Not Available	687	Open in IMG/M
3300012203\|Ga0137399_10888852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo121	750	Open in IMG/M
3300012205\|Ga0137362_11016721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	706	Open in IMG/M
3300012469\|Ga0150984_114911994	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300012469\|Ga0150984_123028919	Not Available	711	Open in IMG/M
3300012685\|Ga0137397_10315141	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300012948\|Ga0126375_10993934	Not Available	682	Open in IMG/M
3300012960\|Ga0164301_10454050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	912	Open in IMG/M
3300016270\|Ga0182036_10810776	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300016270\|Ga0182036_11126584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	650	Open in IMG/M
3300016270\|Ga0182036_11844113	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300016294\|Ga0182041_10002420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9614	Open in IMG/M
3300016294\|Ga0182041_12191762	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300016319\|Ga0182033_10019125	All Organisms → cellular organisms → Bacteria	4121	Open in IMG/M
3300016341\|Ga0182035_10011499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5181	Open in IMG/M
3300016341\|Ga0182035_10042491	All Organisms → cellular organisms → Bacteria	3029	Open in IMG/M
3300016341\|Ga0182035_10330366	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300016341\|Ga0182035_11571555	Not Available	593	Open in IMG/M
3300016357\|Ga0182032_10743388	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300016357\|Ga0182032_11108842	All Organisms → cellular organisms → Bacteria → Proteobacteria	679	Open in IMG/M
3300016371\|Ga0182034_10026917	All Organisms → cellular organisms → Bacteria	3532	Open in IMG/M
3300016371\|Ga0182034_11886616	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300016422\|Ga0182039_10385426	Not Available	1186	Open in IMG/M
3300016422\|Ga0182039_10419472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1140	Open in IMG/M
3300016445\|Ga0182038_10053232	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300020018\|Ga0193721_1151032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	560	Open in IMG/M
3300020580\|Ga0210403_10027211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4557	Open in IMG/M
3300020583\|Ga0210401_11047395	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300021168\|Ga0210406_11104430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	583	Open in IMG/M
3300021170\|Ga0210400_10333315	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300021171\|Ga0210405_10140229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1913	Open in IMG/M
3300021181\|Ga0210388_11232922	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300021406\|Ga0210386_10176492	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300021406\|Ga0210386_10995065	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300021420\|Ga0210394_10441620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1145	Open in IMG/M
3300021433\|Ga0210391_10470476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	987	Open in IMG/M
3300021560\|Ga0126371_10476468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1395	Open in IMG/M
3300021560\|Ga0126371_12675928	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300022508\|Ga0222728_1011628	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300025928\|Ga0207700_10443522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1143	Open in IMG/M
3300025928\|Ga0207700_11601990	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025986\|Ga0207658_10721979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300026142\|Ga0207698_12350665	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300026467\|Ga0257154_1010972	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300026524\|Ga0209690_1214700	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300027703\|Ga0207862_1129694	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300027903\|Ga0209488_10300883	All Organisms → cellular organisms → Bacteria → Proteobacteria	1198	Open in IMG/M
3300029636\|Ga0222749_10553266	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031128\|Ga0170823_13332310	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300031543\|Ga0318516_10001795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8536	Open in IMG/M
3300031543\|Ga0318516_10576521	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300031545\|Ga0318541_10027051	All Organisms → cellular organisms → Bacteria	2808	Open in IMG/M
3300031545\|Ga0318541_10065760	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300031545\|Ga0318541_10124193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1403	Open in IMG/M
3300031545\|Ga0318541_10149973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300031545\|Ga0318541_10229909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1029	Open in IMG/M
3300031545\|Ga0318541_10332207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	848	Open in IMG/M
3300031545\|Ga0318541_10585353	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300031546\|Ga0318538_10635513	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300031561\|Ga0318528_10573261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300031564\|Ga0318573_10310005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	845	Open in IMG/M
3300031564\|Ga0318573_10343684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300031564\|Ga0318573_10726397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	534	Open in IMG/M
3300031572\|Ga0318515_10026826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2778	Open in IMG/M
3300031573\|Ga0310915_10142685	All Organisms → cellular organisms → Bacteria → Proteobacteria	1651	Open in IMG/M
3300031573\|Ga0310915_10211499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1358	Open in IMG/M
3300031723\|Ga0318493_10680071	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300031736\|Ga0318501_10263912	All Organisms → cellular organisms → Bacteria → Proteobacteria	913	Open in IMG/M
3300031736\|Ga0318501_10298491	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300031736\|Ga0318501_10525435	Not Available	646	Open in IMG/M
3300031763\|Ga0318537_10114406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	1001	Open in IMG/M
3300031768\|Ga0318509_10355041	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300031777\|Ga0318543_10022912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	2357	Open in IMG/M
3300031777\|Ga0318543_10086762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1331	Open in IMG/M
3300031777\|Ga0318543_10230118	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300031780\|Ga0318508_1111728	All Organisms → cellular organisms → Bacteria → Proteobacteria	763	Open in IMG/M
3300031781\|Ga0318547_10100971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella aerolata	1647	Open in IMG/M
3300031792\|Ga0318529_10596949	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300031794\|Ga0318503_10020256	Not Available	1867	Open in IMG/M
3300031819\|Ga0318568_10148840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1430	Open in IMG/M
3300031879\|Ga0306919_11308857	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300031890\|Ga0306925_10019777	Not Available	6699	Open in IMG/M
3300031890\|Ga0306925_10021992	All Organisms → cellular organisms → Bacteria	6385	Open in IMG/M
3300031890\|Ga0306925_10327133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1647	Open in IMG/M
3300031890\|Ga0306925_11045716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	829	Open in IMG/M
3300031890\|Ga0306925_11067957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	818	Open in IMG/M
3300031893\|Ga0318536_10451644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	647	Open in IMG/M
3300031896\|Ga0318551_10163185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1221	Open in IMG/M
3300031897\|Ga0318520_10546739	Not Available	717	Open in IMG/M
3300031897\|Ga0318520_11028029	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300031910\|Ga0306923_10083856	All Organisms → cellular organisms → Bacteria	3574	Open in IMG/M
3300031912\|Ga0306921_10108542	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300031912\|Ga0306921_10902589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1003	Open in IMG/M
3300031941\|Ga0310912_10080398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2366	Open in IMG/M
3300031945\|Ga0310913_10098918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1970	Open in IMG/M
3300031945\|Ga0310913_11256092	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300031946\|Ga0310910_10333439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1197	Open in IMG/M
3300031946\|Ga0310910_10821514	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300031947\|Ga0310909_10050419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3197	Open in IMG/M
3300031947\|Ga0310909_10251485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1476	Open in IMG/M
3300031954\|Ga0306926_10083873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3882	Open in IMG/M
3300031954\|Ga0306926_11206896	Not Available	888	Open in IMG/M
3300031954\|Ga0306926_12203594	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300032001\|Ga0306922_10073665	All Organisms → cellular organisms → Bacteria	3573	Open in IMG/M
3300032001\|Ga0306922_10242941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1934	Open in IMG/M
3300032010\|Ga0318569_10172693	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300032044\|Ga0318558_10348224	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300032063\|Ga0318504_10327309	All Organisms → cellular organisms → Bacteria → Proteobacteria	727	Open in IMG/M
3300032068\|Ga0318553_10063290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1840	Open in IMG/M
3300032076\|Ga0306924_10003996	Not Available	14318	Open in IMG/M
3300032091\|Ga0318577_10122271	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300032094\|Ga0318540_10352071	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300032261\|Ga0306920_100027362	All Organisms → cellular organisms → Bacteria	8078	Open in IMG/M
3300032261\|Ga0306920_100280423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2484	Open in IMG/M
3300032261\|Ga0306920_101768748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Belnapia → Belnapia moabensis	873	Open in IMG/M
3300033289\|Ga0310914_10329716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1378	Open in IMG/M
3300033290\|Ga0318519_10126390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1406	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.65%
Host-Associated	Host-Associated	4.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.75%
Plants	Host-Associated → Plants	3.62%
Aquatic	Environmental → Aquatic	2.90%
Fungi	Host-Associated → Fungi	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.90%
Freshwater	Environmental → Aquatic → Freshwater	2.17%
Sediment	Environmental → Aquatic → Sediment	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Mycelium	Host-Associated → Fungi → Mycelium	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.68%
Loam	Environmental → Terrestrial → Soil → Loam	5.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.45%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012078	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC083 MetaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101823082	3300001867	Forest Soil	MMLSQSEEAVWHWRGSDCDIAEAWHHGGEVVSAVEAILEFGEVAGYMLVADGAVSASDGA
JGIcombinedJ26739_1001985185	3300002245	Forest Soil	MILSQFEEAVWHRWGSDRDIAEAWHHGGEIVSAIEAVLEFGEVAGYMLVVD
JGI26341J46601_102190951	3300003219	Bog Forest Soil	MILSQFEEAVWDRRGSDCDRAEAWHHGGEIVSAVEAALEFGEVAGYMLVADGAVSVS
Ga0062386_1009011901	3300004152	Bog Forest Soil	MILSQFEEAVWRRRGSDCDIAEAWHHRGEIVSAVEAVLEFGEVAGY
Ga0070712_1015333412	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MILRPFEEAVWHRRGSDGDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVAD
Ga0070765_1017278441	3300006176	Soil	MILSQFEEAVWHRRGSGCDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSA
Ga0079222_112279832	3300006755	Agricultural Soil	MILSQFEEVVWHRRGSDCDMAEAWHHGGEIVSAVE
Ga0079222_115543373	3300006755	Agricultural Soil	MILSQSGEAVWHRRGSDCDIAEAWHHGGEIVSAVEA
Ga0075425_1029447642	3300006854	Populus Rhizosphere	MILSQSQEAVWHRRGSDCDIAEAWQHGGEIVSAVEAVLEFGEVAGYMLV
Ga0079219_123755241	3300006954	Agricultural Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVFEFGEVAGCMLVADGAVSASDGALD
Ga0099795_103206553	3300007788	Vadose Zone Soil	MILSQFEEAVWHRWGSDCDIAEAWHHGGEIVSAVEAVLEFG
Ga0126374_102470291	3300009792	Tropical Forest Soil	MILSQVEEAVWHGRSSDGDVAEPWHHGGEIVASVETVFE
Ga0126314_102663041	3300010042	Serpentine Soil	MILRQFEEAVWHRWGSDCNEAKPWDQDGEIVSPVEAVFEFGEVARHVLAADGTVSAGDRALD
Ga0126384_104900361	3300010046	Tropical Forest Soil	MILSQFEEAVWHRRSSESDVAEAWHHGGEIVSAVEAVLEFGE
Ga0126373_120475261	3300010048	Tropical Forest Soil	MILSQFEEPVWHRRGPDCDIAEAWHHSGEIVSAVE
Ga0127503_101991822	3300010154	Soil	MILSQFKEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEV
Ga0126376_102208181	3300010359	Tropical Forest Soil	MILSQFEEAVWHRRSSESDVAEAWHHGGEIVSAVEA
Ga0126377_120627583	3300010362	Tropical Forest Soil	MILSQFEEAVWHRRSSENDVAEARHHGGEIVSAVEAVLEFGEVAGYMLVADG
Ga0126381_1027290742	3300010376	Tropical Forest Soil	MILSQFEEAVWHRRSSESDVAEAWHHGGEIVSAVE
Ga0137391_103937742	3300011270	Vadose Zone Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFG
Ga0137463_11884953	3300011444	Soil	MILRQFEEAVWHGRGSDGEVAEAWQHGGEIVSPVEAVFE
Ga0153999_10641951	3300012078	Attine Ant Fungus Gardens	SQFEEALWHWRSLNCDATEPRHHRSEIVSPVEPVFEFDEVAGYMLVADGAVSVLTRQAG*
Ga0137399_108888522	3300012203	Vadose Zone Soil	MILSEFEEAVWHRRGSDCDIAEAWHHGGEIVSAVKAV
Ga0137362_110167211	3300012205	Vadose Zone Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEF
Ga0150984_1149119944	3300012469	Avena Fatua Rhizosphere	MILSQFEEAVWGSDCDKAEAWHHGGEIVSAVEAVLEFGEVAGYML
Ga0150984_1230289193	3300012469	Avena Fatua Rhizosphere	MILSQFEEAVWHWRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAG
Ga0137397_103151411	3300012685	Vadose Zone Soil	MILSQFEEAIGHGWSSDGDVAEPRHHGGEIVSPVEPVFEFGEVAG
Ga0126375_109939342	3300012948	Tropical Forest Soil	MILSQFEEAVWHRRSSESDVAEAWHHGGEIVSAVEAVLEFGEVAG
Ga0164301_104540503	3300012960	Soil	MILRQFEEAVWHRWGSDCDEAKPWNQDGEIVSPVEAVFEFGEVARHVLAAEGTVSAGDRALAIAT
Ga0182036_108107762	3300016270	Soil	MILSQFEEAVWHRRGSECDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSASD
Ga0182036_111265842	3300016270	Soil	MMLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFG
Ga0182036_118441131	3300016270	Soil	MILSQFEKAVWHRRGPDCDKAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGA
Ga0182041_100024201	3300016294	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGESVSAVKAVLE
Ga0182041_121917621	3300016294	Soil	MILSQFEKAVWHRRGPDCDKAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSASDGA
Ga0182033_100191251	3300016319	Soil	MILSQFEKAVWHRRGPDCDKAEAWHHGGEIVSAVEAVLEFGEVAGYM
Ga0182035_100114997	3300016341	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVEAV
Ga0182035_100424915	3300016341	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLV
Ga0182035_103303664	3300016341	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVKAVLEFGEV
Ga0182035_115715551	3300016341	Soil	MILSQFEEAVWHRRGSDCDIAEAWDHGGEIVSAIKAVLEFGEVAGYMLVADGAVSASDGALDVAE
Ga0182032_107433881	3300016357	Soil	MMLSQFEEAVWHRGRSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGSMLVVDGAVS
Ga0182032_111088421	3300016357	Soil	MMLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGSMLVVDGAVS
Ga0182034_100269171	3300016371	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTDGA
Ga0182034_118866161	3300016371	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTDGA
Ga0182039_103854261	3300016422	Soil	MILSQFEEAVWHRRGSDCDIAEAWHPGGEVVSAIKAVLEFGEVAGYM
Ga0182039_104194722	3300016422	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAV
Ga0182038_100532321	3300016445	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGE
Ga0193721_11510323	3300020018	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAV
Ga0210403_100272115	3300020580	Soil	MIFSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVL
Ga0210401_110473951	3300020583	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEA
Ga0210406_111044301	3300021168	Soil	MILSQFEQAVWHRRGSDCDIPEAWHHGGEIVSAVEAVLEFGEVAGRML
Ga0210400_103333153	3300021170	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIEAVL
Ga0210405_101402291	3300021171	Soil	MILSQFEEAVWHRRGSNCDIAEAWHHGGEIVSAVEAVLEFGEVAGY
Ga0210388_112329221	3300021181	Soil	MIFSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAV
Ga0210386_101764921	3300021406	Soil	MIFSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVE
Ga0210386_109950652	3300021406	Soil	MILSQFEEAIWHRRGSDCDIAEAWHHGGEIVSAVEAVLE
Ga0210394_104416201	3300021420	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYMRLSGMVRK
Ga0210391_104704761	3300021433	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIEAV
Ga0126371_104764681	3300021560	Tropical Forest Soil	MILSQFEEAIWHRWGSDCDVAEAWHHGGEIVSAVKA
Ga0126371_126759283	3300021560	Tropical Forest Soil	MILSQFEEAVWHRRGSECDIAEAWHHGGEIVSAVEAVLEFGEVAGDMLV
Ga0222728_10116283	3300022508	Soil	MIFSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAV
Ga0207700_104435224	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MILSQFEEAIWHWRGSDCDTAEAWHHGGEIVSAVEAVLEFGEVAGYMLVGDG
Ga0207700_116019902	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MILSQFEEAIWHRRGSDCDTAEAWHHGGEIVSAVEAV
Ga0207658_107219792	3300025986	Switchgrass Rhizosphere	MILRQFEEAVWHRRGSGCDEAEPWHHGGEIVSPVEPV
Ga0207698_123506653	3300026142	Corn Rhizosphere	MILRQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYM
Ga0257154_10109722	3300026467	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSASDGALDVAEGGC
Ga0209690_12147003	3300026524	Soil	MILSQFKEAVWHRRGSECDIAQAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSASDGALD
Ga0207862_11296941	3300027703	Tropical Forest Soil	MMLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGELAGYMLVVDGAVSASDGALDVAEGGVDPL
Ga0209488_103008831	3300027903	Vadose Zone Soil	MILSQFEEAVWHRRGSDRDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVA
Ga0222749_105532661	3300029636	Soil	MIFSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEA
Ga0170823_133323102	3300031128	Forest Soil	MILSQFEEAVRHRRGSDCDIAEAWHDGGEIVSAVEAVLEFG
Ga0318516_1000179511	3300031543	Soil	MILSQFEEVVWHRRGSDCDKAEAWHHGGEIVSAIEA
Ga0318516_105765211	3300031543	Soil	MILSQFEKAVWHRRGPDCDKAEAWHHGGEIVSAVEAVL
Ga0318541_100270511	3300031545	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVKAV
Ga0318541_100657604	3300031545	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVL
Ga0318541_101241931	3300031545	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYM
Ga0318541_101499731	3300031545	Soil	MMLSQFEEAVWHRGGSDRDIAEAWHHGGEIVSVVE
Ga0318541_102299092	3300031545	Soil	MILSQFEEAVWHRRGSDCDIAEAWDHGGEIVSAIKA
Ga0318541_103322071	3300031545	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYM
Ga0318541_105853531	3300031545	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIK
Ga0318538_106355131	3300031546	Soil	MILSQFEKAVWHRRGPDCDKAEAWHHGGEIVSAVEAV
Ga0318528_105732612	3300031561	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVK
Ga0318573_103100052	3300031564	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTDGAVSASDGALDVA
Ga0318573_103436842	3300031564	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAV
Ga0318573_107263973	3300031564	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGSEIVSAVEA
Ga0318515_100268262	3300031572	Soil	MILSQFEEVVWHRRGSDCDKAEAWHHGGEIVSAIEAVLEFGEVAGYMLVADGGKCP
Ga0310915_101426855	3300031573	Soil	MMLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGY
Ga0310915_102114992	3300031573	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGY
Ga0318493_106800711	3300031723	Soil	MILSQFEEAVWHRRGSDCDMAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGA
Ga0318501_102639121	3300031736	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMLVADRAVSASDGALDVAEGGVD
Ga0318501_102984911	3300031736	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVE
Ga0318501_105254351	3300031736	Soil	MILSQFEEVVWHRRGSDCDKAEAWHHGGEIVSAIEAVL
Ga0318537_101144063	3300031763	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFSEVAGYMLVADGAVSASDGAFDVAEGVVL
Ga0318509_103550412	3300031768	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMLVADRAVSA
Ga0318543_100229125	3300031777	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTDGAVSASDGALDVAE
Ga0318543_100867621	3300031777	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVEAVL
Ga0318543_102301181	3300031777	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLE
Ga0318508_11117281	3300031780	Soil	MILSQFEKAVWHRRGPDCDKAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADG
Ga0318547_101009713	3300031781	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAIKAVL
Ga0318529_105969491	3300031792	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVKAVL
Ga0318503_100202561	3300031794	Soil	MVLSQFEEAVWHRRGPDCDKAEAWHHGGEIVPAVEAVL
Ga0318568_101488403	3300031819	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMLVADRAVSASDGALDVAEG
Ga0306919_113088572	3300031879	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVKAVLE
Ga0306925_100197771	3300031890	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSAS
Ga0306925_100219921	3300031890	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVKAVLEFGEVA
Ga0306925_103271331	3300031890	Soil	MILSQFEEAVWHRRGSDCDIAEAWDHGGEIVSAIKAVL
Ga0306925_110457161	3300031890	Soil	MLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGEV
Ga0306925_110679572	3300031890	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLE
Ga0318536_104516442	3300031893	Soil	MLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGSMLV
Ga0318551_101631851	3300031896	Soil	MLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGELAGY
Ga0318520_105467392	3300031897	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMLVAD
Ga0318520_110280291	3300031897	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMFVADGAVSASD
Ga0306923_100838561	3300031910	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTD
Ga0306921_101085426	3300031912	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTDGAV
Ga0306921_109025893	3300031912	Soil	MLSQFEEAVWHRGGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYM
Ga0310912_100803981	3300031941	Soil	MILSQFEEAVWHRRGSDCDIAEAWDHGGEIVSAIKAV
Ga0310913_100989181	3300031945	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVA
Ga0310913_112560922	3300031945	Soil	MILSQFEEAVWHRRGSDCDMAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSAS
Ga0310910_103334393	3300031946	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGSEIVSAVEAVLEFGEVAGYMLVTDGAV
Ga0310910_108215142	3300031946	Soil	MILSQFEKAVRHRRGPDCDKAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADG
Ga0310909_100504195	3300031947	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYML
Ga0310909_102514851	3300031947	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEF
Ga0306926_100838733	3300031954	Soil	MILSQFEEAVWHRRGSDCDIAEAWDHGGEIVSAIK
Ga0306926_112068962	3300031954	Soil	MILSQFEEAVWHRRGSDCDMAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVSASDGALD
Ga0306926_122035941	3300031954	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAG
Ga0306922_100736657	3300032001	Soil	MILSQFEEAVWHQRGSDCDIAEAWHHGSEIVSAVEAVL
Ga0306922_102429411	3300032001	Soil	MILSQFEEVVWHRRGSDCDKAEAWHHGGEIVSAIEAV
Ga0318569_101726931	3300032010	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAIKAVLE
Ga0318558_103482241	3300032044	Soil	MILSQFEEAVWHRRGSDSDIAEAWYHGGEIVSAVKAVLEFGEVAGYMLVA
Ga0318504_103273091	3300032063	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFSEVAGYMLVADGAVSASDGAFDVAEGVVLT
Ga0318553_100632904	3300032068	Soil	MILSQFEEAVRHRRGSDCDIAEAWHHGGEIVSAVKAVLEFGEVAGYMLVADGAVSAG
Ga0306924_1000399622	3300032076	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMLVADG
Ga0318577_101222713	3300032091	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFSEVAGYMLVADGAVSASDGAFDVAEGVVLTHLKAGFR
Ga0318540_103520712	3300032094	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGEVAGYMLVADRAVSASDGALD
Ga0306920_1000273621	3300032261	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAVEAVLEFGEVAGYMLVADGAVS
Ga0306920_1002804235	3300032261	Soil	MILSQFEEAVWHRRGSDCDIAEAWDHGGEIVSAVKAVL
Ga0306920_1017687482	3300032261	Soil	MILSQFEEAVWHRRGSDCDRAEAWDHGGEIVSAIKAVLEFG
Ga0310914_103297162	3300033289	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFGE
Ga0318519_101263903	3300033290	Soil	MILSQFEEAVWHRRGSDCDIAEAWHHGGEIVSAIKAVLEFSEVAGYMLVADGAVSASDGAFDVAEGVVLTHLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055911

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences