Metagenome / Metatranscriptome Family F055707

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055707
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	55 residues
Representative Sequence	LTKTDDEWSAALEAALTAARRDDLQHGTNAAYVAGCVCKECREHQRIRMARNS
Number of Associated Samples	105
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.45 %
% of genes near scaffold ends (potentially truncated)	67.39 %
% of genes from short scaffolds (< 2000 bps)	85.51 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.594 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.232 % of family members)
Environment Ontology (ENVO)	Unclassified (38.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00932	LTD	6.52
PF14325	DUF4383	5.80
PF11746	DUF3303	4.35
PF03009	GDPD	2.17
PF13472	Lipase_GDSL_2	1.45
PF11296	DUF3097	1.45
PF07883	Cupin_2	1.45
PF00106	adh_short	0.72
PF05532	CsbD	0.72
PF00440	TetR_N	0.72
PF01636	APH	0.72
PF07705	CARDB	0.72
PF08818	DUF1801	0.72
PF15780	ASH	0.72
PF13517	FG-GAP_3	0.72
PF02517	Rce1-like	0.72
PF13424	TPR_12	0.72
PF13374	TPR_10	0.72
PF08386	Abhydrolase_4	0.72
PF07366	SnoaL	0.72
PF07885	Ion_trans_2	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	2.17
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.72
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.72
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.72
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
All Organisms	root	All Organisms	38.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
cellular organisms	root	All Organisms → cellular organisms	38.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.99 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	24.64 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.57 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.72 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5.07 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.17 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.72 %
Egibacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.72 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.17 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.90 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Egibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	0.72 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	2.17 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	1.45 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	0.72 %
Egibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter	0.72 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.72 %
Micrococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Micrococcus	0.72 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.72 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.72 %
Friedmanniella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella	0.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Egibacter rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter → Egibacter rhizosphaerae	0.72 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.72 %
Micromonospora rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	0.72 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.72 %
Microlunatus kandeliicorticis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus kandeliicorticis	0.72 %
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	0.72 %
Nocardioides islandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides islandensis	0.72 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.72 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	0.72 %
Micrococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Micrococcus	0.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.59 %
Arthrobacter sp. H14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. H14	0.72 %
Nocardioides sp. Soil805	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil805	0.72 %
Kribbella sp. VKM Ac-2527	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527	0.72 %
Microcystis aeruginosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	0.72 %
Egibacter rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter → Egibacter rhizosphaerae	0.72 %
Micromonospora rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	0.72 %
Microlunatus kandeliicorticis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus kandeliicorticis	0.72 %
Friedmanniella luteola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	0.72 %
Nocardioides islandensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides islandensis	0.72 %
Micrococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Micrococcus	0.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_11313897	Not Available	2304	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104074901	Not Available	529	Open in IMG/M
3300004463\|Ga0063356_100127890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2839	Open in IMG/M
3300004479\|Ga0062595_100487076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921	Open in IMG/M
3300004480\|Ga0062592_101437069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	658	Open in IMG/M
3300005339\|Ga0070660_101342588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M
3300005347\|Ga0070668_101740432	Not Available	573	Open in IMG/M
3300005457\|Ga0070662_101105809	Not Available	680	Open in IMG/M
3300005578\|Ga0068854_101536425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300005937\|Ga0081455_10523566	Not Available	790	Open in IMG/M
3300006058\|Ga0075432_10535121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300006579\|Ga0074054_11184159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300006581\|Ga0074048_13402131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. H14	554	Open in IMG/M
3300006854\|Ga0075425_102268657	Not Available	604	Open in IMG/M
3300006918\|Ga0079216_10936197	Not Available	659	Open in IMG/M
3300009100\|Ga0075418_10437999	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300009100\|Ga0075418_12057709	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009147\|Ga0114129_11324456	Not Available	892	Open in IMG/M
3300009148\|Ga0105243_11485624	Not Available	701	Open in IMG/M
3300009840\|Ga0126313_10263517	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1339	Open in IMG/M
3300009840\|Ga0126313_11126083	Not Available	646	Open in IMG/M
3300010036\|Ga0126305_10296584	Not Available	1049	Open in IMG/M
3300010036\|Ga0126305_11138126	Not Available	538	Open in IMG/M
3300010037\|Ga0126304_10343003	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300010038\|Ga0126315_11072545	Not Available	543	Open in IMG/M
3300010040\|Ga0126308_10191718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1310	Open in IMG/M
3300010040\|Ga0126308_10286758	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1079	Open in IMG/M
3300010041\|Ga0126312_11166037	Not Available	567	Open in IMG/M
3300010042\|Ga0126314_10323689	Not Available	1103	Open in IMG/M
3300010042\|Ga0126314_10502742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300010044\|Ga0126310_10751227	Not Available	745	Open in IMG/M
3300010044\|Ga0126310_10926565	Not Available	680	Open in IMG/M
3300010045\|Ga0126311_10175040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2527	1548	Open in IMG/M
3300010045\|Ga0126311_11610635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	546	Open in IMG/M
3300010166\|Ga0126306_10358048	Not Available	1134	Open in IMG/M
3300010166\|Ga0126306_11447538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis aeruginosa	569	Open in IMG/M
3300010375\|Ga0105239_12564224	Not Available	594	Open in IMG/M
3300010403\|Ga0134123_10252271	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300012897\|Ga0157285_10177710	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012901\|Ga0157288_10021600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1237	Open in IMG/M
3300012911\|Ga0157301_10355988	Not Available	553	Open in IMG/M
3300012915\|Ga0157302_10063757	Not Available	1076	Open in IMG/M
3300012938\|Ga0162651_100002006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Friedmanniella → Friedmanniella luteola	1884	Open in IMG/M
3300012986\|Ga0164304_10372198	Not Available	1006	Open in IMG/M
3300013102\|Ga0157371_11112349	Not Available	606	Open in IMG/M
3300013297\|Ga0157378_11080358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	839	Open in IMG/M
3300013306\|Ga0163162_10965315	Not Available	963	Open in IMG/M
3300013307\|Ga0157372_11553967	Not Available	762	Open in IMG/M
3300014497\|Ga0182008_10119245	Not Available	1311	Open in IMG/M
3300014497\|Ga0182008_10781730	Not Available	552	Open in IMG/M
3300018054\|Ga0184621_10184159	Not Available	750	Open in IMG/M
3300018066\|Ga0184617_1062111	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300018066\|Ga0184617_1188754	Not Available	613	Open in IMG/M
3300018067\|Ga0184611_1271775	Not Available	595	Open in IMG/M
3300018073\|Ga0184624_10449876	Not Available	565	Open in IMG/M
3300018078\|Ga0184612_10192523	Not Available	1061	Open in IMG/M
3300018078\|Ga0184612_10335113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	770	Open in IMG/M
3300018081\|Ga0184625_10628886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Egibacterales → Egibacteraceae → Egibacter → Egibacter rhizosphaerae	523	Open in IMG/M
3300018469\|Ga0190270_11325344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300021078\|Ga0210381_10193885	Not Available	706	Open in IMG/M
3300021078\|Ga0210381_10302245	Not Available	578	Open in IMG/M
3300021080\|Ga0210382_10324586	Not Available	678	Open in IMG/M
3300021510\|Ga0222621_1047618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	896	Open in IMG/M
3300021951\|Ga0222624_1135709	Not Available	548	Open in IMG/M
3300021951\|Ga0222624_1545690	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300022195\|Ga0222625_1618885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300022756\|Ga0222622_10513634	Not Available	857	Open in IMG/M
3300022756\|Ga0222622_10717302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300025932\|Ga0207690_10760661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides islandensis	799	Open in IMG/M
3300025935\|Ga0207709_10948946	Not Available	701	Open in IMG/M
3300025938\|Ga0207704_11526619	Not Available	573	Open in IMG/M
3300025972\|Ga0207668_11051678	Not Available	729	Open in IMG/M
3300026023\|Ga0207677_11448265	Not Available	633	Open in IMG/M
3300027907\|Ga0207428_11096076	All Organisms → cellular organisms → Bacteria → Terrabacteria group	557	Open in IMG/M
3300028705\|Ga0307276_10184635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Micrococcus	543	Open in IMG/M
3300028707\|Ga0307291_1004950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. Soil805	2846	Open in IMG/M
3300028708\|Ga0307295_10004943	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300028711\|Ga0307293_10152157	Not Available	736	Open in IMG/M
3300028711\|Ga0307293_10163013	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300028711\|Ga0307293_10283743	Not Available	525	Open in IMG/M
3300028712\|Ga0307285_10016977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1637	Open in IMG/M
3300028713\|Ga0307303_10184892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300028716\|Ga0307311_10081831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300028720\|Ga0307317_10140922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300028721\|Ga0307315_10104583	Not Available	836	Open in IMG/M
3300028721\|Ga0307315_10300214	Not Available	509	Open in IMG/M
3300028722\|Ga0307319_10081651	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300028722\|Ga0307319_10237787	Not Available	599	Open in IMG/M
3300028744\|Ga0307318_10363643	Not Available	510	Open in IMG/M
3300028754\|Ga0307297_10409120	Not Available	502	Open in IMG/M
3300028755\|Ga0307316_10041113	Not Available	1535	Open in IMG/M
3300028771\|Ga0307320_10210405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	761	Open in IMG/M
3300028778\|Ga0307288_10153939	Not Available	867	Open in IMG/M
3300028778\|Ga0307288_10396971	Not Available	561	Open in IMG/M
3300028782\|Ga0307306_10049517	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300028784\|Ga0307282_10512517	Not Available	582	Open in IMG/M
3300028807\|Ga0307305_10023444	All Organisms → cellular organisms → Bacteria	2789	Open in IMG/M
3300028811\|Ga0307292_10355901	Not Available	618	Open in IMG/M
3300028814\|Ga0307302_10384927	Not Available	693	Open in IMG/M
3300028819\|Ga0307296_10357134	Not Available	798	Open in IMG/M
3300028828\|Ga0307312_10519542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300028828\|Ga0307312_10643626	Not Available	702	Open in IMG/M
3300028878\|Ga0307278_10098582	Not Available	1314	Open in IMG/M
3300028878\|Ga0307278_10181577	Not Available	940	Open in IMG/M
3300028884\|Ga0307308_10237816	Not Available	873	Open in IMG/M
3300030496\|Ga0268240_10142477	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300031058\|Ga0308189_10436635	Not Available	550	Open in IMG/M
3300031093\|Ga0308197_10122637	Not Available	800	Open in IMG/M
3300031100\|Ga0308180_1023005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus kandeliicorticis	616	Open in IMG/M
3300031731\|Ga0307405_10128365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1747	Open in IMG/M
3300031731\|Ga0307405_11183022	Not Available	660	Open in IMG/M
3300031740\|Ga0307468_102329034	Not Available	521	Open in IMG/M
3300031903\|Ga0307407_10124354	Not Available	1640	Open in IMG/M
3300031903\|Ga0307407_10408814	Not Available	975	Open in IMG/M
3300031903\|Ga0307407_11018018	Not Available	641	Open in IMG/M
3300031911\|Ga0307412_11498403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	613	Open in IMG/M
3300032002\|Ga0307416_100656832	Not Available	1134	Open in IMG/M
3300032002\|Ga0307416_103073618	Not Available	558	Open in IMG/M
3300032004\|Ga0307414_10916788	All Organisms → cellular organisms → Bacteria → Terrabacteria group	804	Open in IMG/M
3300032005\|Ga0307411_11709406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300032080\|Ga0326721_10758425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300032126\|Ga0307415_101862319	Not Available	583	Open in IMG/M
3300034151\|Ga0364935_0232405	Not Available	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.01%
Host-Associated	Host-Associated	28.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.97%
Plants	Host-Associated → Plants	28.99%
Aquatic	Environmental → Aquatic	13.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.64%
Sediment	Environmental → Aquatic → Sediment	8.70%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.35%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.23%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	8.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_113138975	3300000363	Soil	LTATRRADLEHGTNAAYVHCCVCEECWEHQRIRMTQNQKPLNAT*
INPhiseqgaiiFebDRAFT_1040749012	3300000364	Soil	WGLTKTDAEWSAALDGALMAARRNDLEHGSSAEYIAGCVCKECREHQRLRMGKNRWTK*
Ga0063356_1001278903	3300004463	Arabidopsis Thaliana Rhizosphere	LTPNQVWGLTKTDDAWSEALEAALTATRRADLRHGTNAAYVTGCVCKECREHQRQRMARNRR*
Ga0062595_1004870762	3300004479	Soil	AEWAESLGGALEATRREDLEHGTNAAYVQGCVCSECRENQRIRMAKNR*
Ga0062592_1014370692	3300004480	Soil	EALTVSRRGDLKHGSNAAYVAGCICKDCREHQRRRMAKNRG*
Ga0070660_1013425882	3300005339	Corn Rhizosphere	VWGLTKTDLEWSEKLDTALNAARRSDLKHGTNAAYVHGCVCSECREHQQIRMGRSHN*
Ga0070668_1017404322	3300005347	Switchgrass Rhizosphere	LDLTSNQVWGLTKTDEEWSTALQAALMATRQDDLEHGTNAAYVAGSVCKGCRVHQRERMAKNRRTG*
Ga0070662_1011058091	3300005457	Corn Rhizosphere	MLSSEEPVWGLAQTDEEWSTALEAAVMTSRRDNLEHGTNAAYVAGCVCRECREHQRVRMGRNR*
Ga0068854_1015364252	3300005578	Corn Rhizosphere	DTALNAARRSDLKHGTNAAYVHGCVCSECREHQQIRMGRSHN*
Ga0081455_105235661	3300005937	Tabebuia Heterophylla Rhizosphere	VWGLTKTDQEWSDALEAALTTARGDDLEHGTNAAYVHGCVCRDCRDHQQRRMGRVVR*
Ga0075432_105351212	3300006058	Populus Rhizosphere	TKTDEEWSTALAAALMATRRDDLKHGTKAAYVAGRVCSDCREHQRSRMARAAEVGKA*
Ga0074054_111841592	3300006579	Soil	IWGLTKTDGEWSAALEAALVATRRDDLKHGTNAAHVAGCVCSECRAHQRIRMARNR*
Ga0074048_134021311	3300006581	Soil	VTHKGLTKIDEEWSRALDVALTATRRDDLEHCTNTQYMQGCVCKDCRE
Ga0075425_1022686571	3300006854	Populus Rhizosphere	MRKLLRPLENALTATRRTDLMHGTTPAYVRGCVCKECREHQRQRMARKH*
Ga0075434_1001128852	3300006871	Populus Rhizosphere	MATRRDDLEHGTTPAYVAGCVCKECQEYQRARMSRPGT*
Ga0079216_109361972	3300006918	Agricultural Soil	MVAALETALTATRRDDVKHGTTPAYVRGCVCKEAPEHQRQRMAKNRKTAI*
Ga0075418_104379993	3300009100	Populus Rhizosphere	KTDKEWLAALDAALAATRRDDLGHGTNAAYVAGCVCSARREHQRIRMAANRR*
Ga0075418_120577091	3300009100	Populus Rhizosphere	LAKTDAEWSAALEAALTSARRNDLDHGTNAAYVAGCVCKDCREHQRQRMARNR*
Ga0114129_113244562	3300009147	Populus Rhizosphere	LEAALNAMRDDLEHGTNAAYVVGCVCKECREHQRIRMARNR*
Ga0105243_114856241	3300009148	Miscanthus Rhizosphere	QVWGLTKTDEEWTTALEAALMATRRDDLEHGTNAAYAAGCVCRECREYQRVRMLRNR*
Ga0111538_100585553	3300009156	Populus Rhizosphere	MATRRDDLEHGTTPAYVAGCVCKECREYQRARMSRPGT*
Ga0126313_102635172	3300009840	Serpentine Soil	VLRDLDVTPNQVWRLAKTDDEWSAALEAALTATRRDDLQHGTNAAYVQGCICAECREHQRIRMAGSR*
Ga0126313_111260831	3300009840	Serpentine Soil	MVRELEAALTAIRRDGIEHGTNAAYVHGCVCRECRENQRIRMARNRR
Ga0126305_102965841	3300010036	Serpentine Soil	MTKTDNEWLAALDAALAATRQNDLRHGTNAAYVAGCLCKECREHQRIR
Ga0126305_111381261	3300010036	Serpentine Soil	GMVAALETALMASRRDDLQHGTNAAYVAGCVCGECRSHQRVRMAKQRN*
Ga0126304_103430032	3300010037	Serpentine Soil	EAALTATRRDDLQHGTNAAYVRGCVCRECPEHQRIRMARNRPTVR*
Ga0126315_101490852	3300010038	Serpentine Soil	VLRDLDVTPNQVWRLAKTDDEWSAALEAALTATRRDDLQHGTNAAYVQGCICAECREHQRIRMARSH*
Ga0126315_110725451	3300010038	Serpentine Soil	LTKTDDEWSAALEAALTAARRDDLQHGTNAAYVAGCVCKECREHQRIRMARNS*
Ga0126308_101917182	3300010040	Serpentine Soil	LTKTDDQWAGALEAALTASRRDNLKHGTTAAYVRGCVCSECREHQRERMAKNRG*
Ga0126308_102867582	3300010040	Serpentine Soil	VLRDLDVTPNQVWRLAKTDDEWSAALEAALTATRRDDLQHGTNAAYVQGCICAECREHQRIRMARSR*
Ga0126312_111660371	3300010041	Serpentine Soil	VGLTKTDDEWSAALEAALTATRRHDLKHGTNATYVRGCVCSDSRQHQRIRMARQSI*
Ga0126314_103236891	3300010042	Serpentine Soil	EWSEKLEAALTASRRQDLEHGTNAAYLHGCVCSDCRAHQQVRMGSHRA*
Ga0126314_105027421	3300010042	Serpentine Soil	PNQVWGLTKTDEQWSADLDAALTATRRGDLKHGTNAAYVAGGVCKECREHQRIRMAKNR*
Ga0126310_107512272	3300010044	Serpentine Soil	VWGLTKTDHEWAARQDAALAAIRRDDLKHGTNAAYVAGYVRKDWREHQRQRLARNH*
Ga0126310_109265651	3300010044	Serpentine Soil	HQDRPQWSAELEAALTATRRGDLKHGTNAAYVAGCVCSDCREHQRQRMAKNR*
Ga0126311_101750401	3300010045	Serpentine Soil	QVWGMARVDREWSAALEAALTATRRDDLKHGTNAAYVAGCVCSECREHRRWWMARNRH*
Ga0126311_116106351	3300010045	Serpentine Soil	DDEWFQKLEAALTASRREDLEHGTNAAYIHGCVCSDCRTHQQVRQGRTVAR*
Ga0126306_103580481	3300010166	Serpentine Soil	VLRDLGLTSKQVWGLTRTDEEWSAQLDAALTARRDDLQHGTTPAYVRGCVCSECREYQRVRMARMR*
Ga0126306_114475381	3300010166	Serpentine Soil	KLDAALTANRRDDLEHGTNAAYVQGCVCSECREHQQVRMARNRQPLNAT*
Ga0105239_125642241	3300010375	Corn Rhizosphere	PVWGLAQTDEEWSTALEAAVMTSRRDNLEHGTNAAYVAGCVFRESREHQRVRMGRNR*
Ga0134123_102522712	3300010403	Terrestrial Soil	VWGLTKTEEEWSTALEAALMATRQDDFEHGTNAAYVAGCVCTECRVHQRERMAKNRRTG*
Ga0157285_101777101	3300012897	Soil	TDQEWSEALEEALTVSRRGDLKHGSNAAYVAGCICKDCREHQRRRMAKNRG*
Ga0157288_100216003	3300012901	Soil	WGLTKTDDKWSSQVEAALMGARRDDLQHGTTAAYVAGCVCKDCREHQRQRMGRNR*
Ga0157301_103559881	3300012911	Soil	WGLTKTDEEWSSALEAALTATRRDDLQHGTNAAYVAGCVCGECREHQRVRMTRSRRGR*
Ga0157302_100637571	3300012915	Soil	EWSSQLDAALTATRREDLQHGTTPAYVRGCVCKDCREHQRVRMARRRG*
Ga0162651_1000020062	3300012938	Soil	TDQEWAEKLDTALTAARRNDLKHGTNAAYVHGCVCNECREHQRVRMGRNRS*
Ga0164304_103721981	3300012986	Soil	TLEAALTASRRSNLKHGTNAAYVAGCVCKECRAYQSIRMGKRRD*
Ga0157371_111123492	3300013102	Corn Rhizosphere	MLSSEEPVWGLAQTDEEWSTALEAAVMTSRRDNLEHGTNAAYVAGCVCRECREHQRVRMAGTDEL*
Ga0157378_110803581	3300013297	Miscanthus Rhizosphere	TDKDWSAALEAALTTTRRGDLQHGTNAAYVHGCVCSECRNHQRVRMARNRG*
Ga0163162_109653151	3300013306	Switchgrass Rhizosphere	VRDLALTSNQVWGLTKTDEEWSTALEAALMATRQDDLEHGTNAAYVAGSVCKGCRVHQRERMAKNRRTG*
Ga0157372_115539671	3300013307	Corn Rhizosphere	VWGLTETDEEWSTALEAALMATRQDDLEHGTNAAYVAGRVCTECRVHQRERIAKNRRTG*
Ga0182008_101192452	3300014497	Rhizosphere	VWGLARTDEEWSAALETALTETRRTDLSHGTNAAYVAGCVCKDCREHQQQRMGRGRS*
Ga0182008_107817302	3300014497	Rhizosphere	LTSNQVWGLTKTDHQWSDELEDALTATRHSDLQHGTTPAYLRGCVCRECREHQRIRMARIAESAANR*
Ga0132256_1010580531	3300015372	Arabidopsis Rhizosphere	EAALTASRRGDLKHGTNAAYVAGCVCKDCREHQQQRMGRNQ*
Ga0184621_101841591	3300018054	Groundwater Sediment	LAALEAALTAMRPDDLQHGTNAAYVHGCVCSERREHQQIRMGKNRS
Ga0184617_10621113	3300018066	Groundwater Sediment	MLTSNQVWGLTKTDEEWSTALEKALTATRRDDLKHGTNAAYVAGCVCWDCREHRGQRMARNR
Ga0184617_11097001	3300018066	Groundwater Sediment	AIRDFGLTSNQVWGLTKTDEDWATALEATLTATRRDDLQHGTSAAYAHGCVCSECRAHQRIRMARKH
Ga0184617_11887541	3300018066	Groundwater Sediment	PIRCWGLTKTDPEWSEKLEAALTASRRADLRQGTTAAYVHGCVCSECREHQRQRMARNR
Ga0184611_12717752	3300018067	Groundwater Sediment	GLTKTDQEWSEKLDRALTATRGDDLEHGTNAAYVHGCVCSDGRAHQRIRIARNQG
Ga0184624_104498761	3300018073	Groundwater Sediment	NQVWGLTKTDQEWAEKLETALTTARRNDLEHGTNAAYVHGCVCEECREHQQIRMGRSRG
Ga0184612_101925231	3300018078	Groundwater Sediment	SNQVWGLVKTDRDWSEKLEAALAATRRDDLQHGTNAAYVAGCVCKVCREHQRIRMARNR
Ga0184612_103351132	3300018078	Groundwater Sediment	SNQVWGLTKTDPEWSEKLDTALTAMRRNDLQHGTNAAYVHGCVCSECREHQRIRMAKNP
Ga0184625_106288862	3300018081	Groundwater Sediment	GLTKTDNEWLAALDAALAATRRNDLRHGTNAAYVQGCVWSEWREHQRIRMGKNRN
Ga0190270_113253441	3300018469	Soil	VGLTKTDPEWATTLEAVLTATRRDDLEHGANAAYVAGCVCRDCRERQRVRMSKNRRGAMSLRLSLE
Ga0190267_103317641	3300019767	Soil	LTTARRDDLEHGTNAAYVHGFVCSECREHQRIRMATPRLDT
Ga0193701_11100741	3300019875	Soil	VRDLGLTPNQVWGLTKTDGQWSAELEAALTATRRGDLKHGTNAAYVAGCVCKDCRDHQRRRMAKNHG
Ga0210381_101938852	3300021078	Groundwater Sediment	MSSDSRRMLTSNQVWGLTKTDEEWSTALEKALTATRRDDLKHGTNAAYVAGCVCWDCREH
Ga0210381_103022452	3300021078	Groundwater Sediment	NQVWGLTKTNEGWSTALETALTASRRDDLQDGTNAAYLAGCVCGECRSHQRVRMAKQRN
Ga0210382_103245861	3300021080	Groundwater Sediment	MRIGMEANQVWGLTKTDQDWSEKLEAALTAARRGDLQHGTNVGYVCSECREHQRVRMARN
Ga0222621_10476181	3300021510	Groundwater Sediment	DEEWSTALEAALTATRRDDLQHGTNAAYVAGCVCRECRDHQRNRIARNRR
Ga0222624_11357091	3300021951	Groundwater Sediment	TDYDWATALEAALTASRRVDLQRGTNAAYVAGCVCGECRSHQRVRMAKQRN
Ga0222624_15456901	3300021951	Groundwater Sediment	WSTALEKALTATRRDDLKHGTNAAYVAGCVCWDCREHRRQRMARNR
Ga0222625_16188852	3300022195	Groundwater Sediment	GLTRTDQEWSQKLEAALTATRRDDLEHGTNAAYVHGCVCGECRDHQQVRIGRSRG
Ga0222622_105136342	3300022756	Groundwater Sediment	TDEEWSTALEAALTATRREDLKHGTNAGYVAGCVCSECRAHQQVRMGRNG
Ga0222622_107173021	3300022756	Groundwater Sediment	DFGLTSNQVWGLTKTDEDWATALEATLTATRRDDLQHGTSAAYAHGCVCSECRAHQRIRMARKH
Ga0207690_107606612	3300025932	Corn Rhizosphere	VWGLTKTEEEWSTALEAALMATRPDDLEHGTNAAYVAGSVCKGCRVHQRERMAKNRRTG
Ga0207709_109489462	3300025935	Miscanthus Rhizosphere	QVWGLTKTDEEWTTALEAALMATRRDDLEHGTNAAYAAGCVCRECREYQRVRMLRNR
Ga0207704_115266192	3300025938	Miscanthus Rhizosphere	LTKTDLEWSEKLDTALNAARRSDLKHGTNAAYVHGCVCSECREHQQIRMGRSHN
Ga0207668_110516781	3300025972	Switchgrass Rhizosphere	SNQVWGITKTDEEWSTALEAALMATRQDDFEHGTNAAYVAGSVCKGCRVHQRERMAKNRRTG
Ga0207677_114482653	3300026023	Miscanthus Rhizosphere	TKTDQEWSEKLDTALNAARRSDLKHGTNAAYVHGCVCSECREHQQIRMGRSHN
Ga0207428_110960761	3300027907	Populus Rhizosphere	LTANQLWGLTKTDQEWSASLDAALMATRREDLKHGTTPAYVRGCACRDCREHQRIRVAR
Ga0307276_101846351	3300028705	Soil	LTKIDEGWSTALEAALTASLRVDLQHGTNAAYVAGCVCGECRGHQRVRMAK
Ga0307291_10049504	3300028707	Soil	VWDLADTNEEWSIALEAALTATRRDDLRHGTTGAYVAGCVCKECREHQRQRMARHRG
Ga0307295_100049431	3300028708	Soil	VWGLTKTDGQWSAELEAALTATRRGDLKHGTNAAYVAGCVCKDCRDHQRRRMAKNHG
Ga0307295_101278122	3300028708	Soil	VLRDLGLTPNQVWGLTKTDDEWSAALEDALTATRRRNLQHGTNATYVHGCVCSECRTHQRVRMAKSRN
Ga0307293_101521573	3300028711	Soil	DLGLTSNQVWGLTKTDQEWSEKLDTALTATRRDDLDHGTNAAYVRGCVCSECRAHQRIRMARNRC
Ga0307293_101630133	3300028711	Soil	KTHEEWSTALEKALTATRRDDLKHGTNAAYVAGCVCWDCREHRGQRMARNR
Ga0307293_102837431	3300028711	Soil	MSRSTEEERSEQLEATLTATRRDDLQHGTNAAYVGGCVCRECREHQRIRMARDRAGDG
Ga0307285_100169771	3300028712	Soil	TSNQVFGLARADEEWSRALEAALTASRRDDLQHGTNAAYVHGCVCSECREHQRVRMAR
Ga0307303_101848921	3300028713	Soil	MSNQVWGLTKSDEDWSAALEAALTASRRGDLRHGTNAAYVQGCVCSECREHQRIRMG
Ga0307311_100818313	3300028716	Soil	LSKTDEDWSTALEASLTVTRRDDLQHATNAAYVAGCVCQECREHQRLRMARNHTATARSNRQSKKV
Ga0307307_101509782	3300028718	Soil	LTGTRRDYLKHGTNAAYVAGCVCFECREYQRQRMARQRV
Ga0307317_101409222	3300028720	Soil	DLGLTSNQVWGLTKTDKEWSEQIEAALTATRRNDLQHGTTAAYVRGCVCSECREHQRIRMARNR
Ga0307315_101045831	3300028721	Soil	TTLEAALTASRRSDLKHGTNAAYVAGCVCKECRAYQSIRMGRRRD
Ga0307315_103002142	3300028721	Soil	QVWGLTKTVQEWSAALGAALMATRRDDLQQGTNTAYVHGCVCCECREHQRVRMARNRG
Ga0307319_100816511	3300028722	Soil	GLTPNQVWGLTKTDGQWSAELEAALTATRRGDLKHGTNAAYVAGCVCKDCRDHQRRRMAKNHG
Ga0307319_102377871	3300028722	Soil	DLGLSSNQVFGLARTDEEWSEMLEAALTATRRDDLDHGTNAAYVRGCVCSECRAHQRIRMARNRC
Ga0307318_100073366	3300028744	Soil	MEWSEQLEAALLAIRRDDLEHGTNAAYLHGCVCNECRAHQRQRMAKNRG
Ga0307318_103636431	3300028744	Soil	VWGLTKTDQEWATALEAALTAARRDDLDHGTNAAYANGCICSDCRERQQQRMGRNR
Ga0307297_104091202	3300028754	Soil	GLARADDEWSSALEAALAASRRDDLQHGTNAAYVHGCVCTACREHQRIRMARNR
Ga0307316_100411132	3300028755	Soil	VWGLTKTDGQWSAELEAALTATRRGDLQHGTNAAYVAGCVCKDCRDHQRRRMAKNHG
Ga0307320_100206641	3300028771	Soil	EQLEAALLAIRRDDLEHGTNAAYLHGCVCNECRAHQRQRMAKDRG
Ga0307320_102104052	3300028771	Soil	LTSNQVWGLTKTDEDWATALEATLTATRRDDLQHGTSAAYAHGCVCSECRAHQRIRMARK
Ga0307288_101539391	3300028778	Soil	ELGLTPNQVWGLTKTDEAWSAALEAALTATRRDDLKHGTNAGYVAGCVCTECRTHQQVRMGRNRR
Ga0307288_103969711	3300028778	Soil	VWGLTKIDEGWSTALEAALTASLRVDLQHGTNAAYVRGCVCSECREHQRVRMAQTGNR
Ga0307306_100495171	3300028782	Soil	QVWGLTKTDSEWSAELEAALTATRRGDLKHGTNAAYVAGCVCKDCRDHQRRRMAKNHG
Ga0307282_105125173	3300028784	Soil	TDEEWSTALEAALMATRQHGLEHGTNAAYVAGCVCKECRVHQRERMAKNRRTG
Ga0307287_100723143	3300028796	Soil	IRDFGLTSNQVWGLTKTDEDWATALEATLTATRRDDLQHGTSAAYAHGCVCSECRAHQRIRMARKH
Ga0307305_100234446	3300028807	Soil	ELEAALTATRRGDLKHGTNAAYVAGCVCKDCRDHQRRRMAKNHG
Ga0307292_103559011	3300028811	Soil	WGLTKTDQDWSEKLDAALTATSRDDLKHGPNAAYVQGCVCSECREHQRIRMGRNRRS
Ga0307292_105111912	3300028811	Soil	ALEAAVMATRRDALKHGTNAAYVAGCVCKECREHQRVRMGRNR
Ga0307302_102042771	3300028814	Soil	TAIRDFGLTSNQVWGLTKTDEDWATALEATLTATRRDDLQHGTSAAYAHGCVCSECRAHQRIRMARKH
Ga0307302_103849272	3300028814	Soil	SNQVWGLTKTVQEWSAALGAALMATRRDDLQQGTNTAYVHGCVCCECREHQRVRMARNRG
Ga0307296_103571341	3300028819	Soil	QVWGLTKTDQEWSEKLDTALNAARRNDLKHGTNAAYVHGCVCRECREHQQIRMGRNRS
Ga0307312_105195422	3300028828	Soil	YLKPGVRSRQADEEWSRALEAALTASRRDDLQHGTNAAYVHGCVCSECREHQRVRMAR
Ga0307312_106436261	3300028828	Soil	VGLTKTDQDWSEKLEAALTATRRDDLKHGTSAAYVRGCVCSECREHQRIRMAR
Ga0307278_100985823	3300028878	Soil	MRMGMEANQVWELAKTDQEWSEKLEAALTATRRDDLQHGTNSAYVHGCVCRDCREHQQRRMRRNRNPAGAQ
Ga0307278_101815772	3300028878	Soil	VVRDLDLTSQQVWGLTKIDQEWSAELEVALTAARRDDLEHGTNAAYVHGCVCRDCREHQQRRMGRNRV
Ga0307308_102378161	3300028884	Soil	LTSNQVWGLTKTDEEWSTALEAALMATRQDNLKHGTNAAYVAGYVCRECRGHQLVRMAKNRR
Ga0268240_101424772	3300030496	Soil	RTRTEEDWSTALETSFRSTRRDDLEHGTDTAYVAGFVCKECREHQRIRIARNR
Ga0308189_104366351	3300031058	Soil	QTELETALTATRQDDLKHGTSTAYVRGCVCSECRAWQRQRMARNR
Ga0308197_101226371	3300031093	Soil	DMEWSEQLEAALLAIRRDDLEHGTNAAYLHGCVCNECRAHQRQRMARNR
Ga0308180_10230052	3300031100	Soil	KTDEEWSTALEAALTATRRDDLQHGTNAAYVAGCVCRECRDHQRDRTARNRR
Ga0307405_101283652	3300031731	Rhizosphere	VGLTKTDDEWSAALEAALTATRRHDLKHGTNATYVRGCVCSDSRQHQRIRMARQSI
Ga0307405_111830221	3300031731	Rhizosphere	VLRDLDVTPNQVWRLAKTDDEWSAALEAALTATRRDDLQHGTNAAYVQGCICAECREHQRIRMARSR
Ga0307468_1023290341	3300031740	Hardwood Forest Soil	VLRDLSLTSNQVWGLTKTDQDWSEKLESALTASRRNDLRHGTTPAYVRGCVCSECREWQRIRMAR
Ga0307407_101243541	3300031903	Rhizosphere	MASRQDDLKHGSNAAYMAGCVCSECREHQRIRMARQ
Ga0307407_104088141	3300031903	Rhizosphere	TKTDDEWSAALEAALTATRRHDLKHGTNATYVRGCVCSDSRQHQRIRMARQSI
Ga0307407_110180182	3300031903	Rhizosphere	MTKTDNEWLAALDAALAATRRNDLRHGTNAAYVAGCVCKECREHQRIRMARNR
Ga0307412_114984033	3300031911	Rhizosphere	EWAKDLDAALTAVRRKDLRHGTNAAYVAGCVCKECWEHQRLRMAKNR
Ga0307416_1006568321	3300032002	Rhizosphere	EEWSEQLEAALTATRRDDLQHGTTRAYVRGCVYGECRECQRIRMARNR
Ga0307416_1019985851	3300032002	Rhizosphere	RCDLRRPTVSTKLRELGLSSNQVWGLTKTDQEWSAALGEALLATRRADLQHGTNAAYVHGWVCSECREHQRRRMASLRLDN
Ga0307416_1030736181	3300032002	Rhizosphere	MTKTDNEWLAALDAALAASRRNDLRHGTNAAYVAGCVCKECREHQRIRMARNR
Ga0307414_109167882	3300032004	Rhizosphere	MTKTDNEWLAALDAALTATRRKDLQHGTNAAYVAGCVCKECREHQRVRMARSRR
Ga0307411_117094061	3300032005	Rhizosphere	KWSEQLDAALTATRRDDLNHGTNATYVAGCVCSECREHQGIRMVKNR
Ga0326721_107584251	3300032080	Soil	VWGLTKTDEEWTAALDAALTATRREDVKHGTNAAYVQGCVCGECREHQRIRMARNR
Ga0307415_1018623191	3300032126	Rhizosphere	TRGALEATLTATRRDDLKHGTTAAYVRGCVCKECREHQRERMGRSRYV
Ga0364935_0232405_2_151	3300034151	Sediment	QEWSDKLEAALTAFRREDLRHGTNAAYIHGCVCKDCREYQLVRMGRSRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055707

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences