Metagenome / Metatranscriptome Family F055632

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055632
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	73 residues
Representative Sequence	MRIKLSDADQLQRLLAFLAFDANVIVSQIARDEVEVSFLGSLNTSAQMMQSELRLKLWLAAHPDVIAVMQE
Number of Associated Samples	111
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.74 %
% of genes near scaffold ends (potentially truncated)	24.64 %
% of genes from short scaffolds (< 2000 bps)	86.23 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.261 % of family members)
Environment Ontology (ENVO)	Unclassified (32.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.449 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.28% β-sheet: 21.21% Coil/Unstructured: 50.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00155	Aminotran_1_2	13.77
PF07040	DUF1326	13.04
PF00440	TetR_N	10.14
PF00378	ECH_1	7.25
PF10262	Rdx	2.17
PF09948	DUF2182	2.17
PF05138	PaaA_PaaC	1.45
PF01590	GAF	1.45
PF00082	Peptidase_S8	1.45
PF13487	HD_5	1.45
PF13561	adh_short_C2	0.72
PF13425	O-antigen_lig	0.72
PF08327	AHSA1	0.72
PF12146	Hydrolase_4	0.72
PF05227	CHASE3	0.72
PF04961	FTCD_C	0.72
PF12697	Abhydrolase_6	0.72
PF00857	Isochorismatase	0.72
PF00089	Trypsin	0.72
PF12833	HTH_18	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	13.04
COG3396	1,2-phenylacetyl-CoA epoxidase, catalytic subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.45
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.72
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG3404	Formiminotetrahydrofolate cyclodeaminase	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.99 %
Unclassified	root	N/A	21.01 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.26 %
Unclassified	root	N/A	21.01 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.68 %
Unclassified	root	N/A	21.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.78 %
Unclassified	root	N/A	21.01 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.90 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.72 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.54 %
Unclassified	root	N/A	21.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.90 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	23.91 %
Unclassified	root	N/A	21.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.90 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.91 %
Unclassified	root	N/A	21.01 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.72 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig20717	Not Available	637	Open in IMG/M
3300000956\|JGI10216J12902_103458413	All Organisms → cellular organisms → Bacteria	3808	Open in IMG/M
3300001535\|A3PFW1_10061199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1432	Open in IMG/M
3300001535\|A3PFW1_10201577	Not Available	960	Open in IMG/M
3300001537\|A2065W1_10625982	Not Available	714	Open in IMG/M
3300002568\|C688J35102_119757139	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300003321\|soilH1_10118451	All Organisms → cellular organisms → Bacteria	2324	Open in IMG/M
3300003321\|soilH1_10354438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1033	Open in IMG/M
3300004479\|Ga0062595_100072052	Not Available	1702	Open in IMG/M
3300004479\|Ga0062595_100801947	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005176\|Ga0066679_10108856	Not Available	1694	Open in IMG/M
3300005184\|Ga0066671_10064785	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300005186\|Ga0066676_10280486	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300005332\|Ga0066388_101103031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1344	Open in IMG/M
3300005336\|Ga0070680_100161345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1884	Open in IMG/M
3300005434\|Ga0070709_10197426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300005435\|Ga0070714_100511436	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005446\|Ga0066686_10694066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300005467\|Ga0070706_100611455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1012	Open in IMG/M
3300005468\|Ga0070707_100440393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1264	Open in IMG/M
3300005468\|Ga0070707_101435739	Not Available	657	Open in IMG/M
3300005471\|Ga0070698_100523997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	1124	Open in IMG/M
3300005518\|Ga0070699_101624659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005529\|Ga0070741_10027731	All Organisms → cellular organisms → Bacteria	8164	Open in IMG/M
3300005529\|Ga0070741_10054365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4781	Open in IMG/M
3300005529\|Ga0070741_10073105	All Organisms → cellular organisms → Bacteria	3844	Open in IMG/M
3300005532\|Ga0070739_10000015	All Organisms → cellular organisms → Bacteria	404783	Open in IMG/M
3300005537\|Ga0070730_10966690	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005538\|Ga0070731_10061623	All Organisms → cellular organisms → Bacteria	2493	Open in IMG/M
3300005538\|Ga0070731_10109009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1833	Open in IMG/M
3300005542\|Ga0070732_10049951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2416	Open in IMG/M
3300005542\|Ga0070732_10372107	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005545\|Ga0070695_100100986	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1943	Open in IMG/M
3300005556\|Ga0066707_10296866	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300005557\|Ga0066704_10417870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300005557\|Ga0066704_10777159	Not Available	597	Open in IMG/M
3300005558\|Ga0066698_10638232	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300005559\|Ga0066700_10211090	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300006028\|Ga0070717_11789319	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	555	Open in IMG/M
3300006755\|Ga0079222_11190215	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006806\|Ga0079220_11788888	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006903\|Ga0075426_10494702	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300006914\|Ga0075436_101449380	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300007740\|Ga0104326_112660	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300007820\|Ga0104324_123971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1741	Open in IMG/M
3300009012\|Ga0066710_100616100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1648	Open in IMG/M
3300009038\|Ga0099829_11340681	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300009088\|Ga0099830_11795081	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009089\|Ga0099828_10346342	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300009090\|Ga0099827_10516941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300009090\|Ga0099827_10523593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300009090\|Ga0099827_11033342	Not Available	713	Open in IMG/M
3300009093\|Ga0105240_10682905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1122	Open in IMG/M
3300009137\|Ga0066709_100807974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1359	Open in IMG/M
3300010154\|Ga0127503_10929480	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300010159\|Ga0099796_10380797	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300010333\|Ga0134080_10270067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300010371\|Ga0134125_10575043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300010373\|Ga0134128_10617382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1206	Open in IMG/M
3300010396\|Ga0134126_10193016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2441	Open in IMG/M
3300010396\|Ga0134126_12801033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300010399\|Ga0134127_11545843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300011269\|Ga0137392_10562012	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300011270\|Ga0137391_10177692	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300011270\|Ga0137391_10799848	Not Available	777	Open in IMG/M
3300011271\|Ga0137393_10074478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2716	Open in IMG/M
3300011271\|Ga0137393_10186779	Not Available	1745	Open in IMG/M
3300011992\|Ga0120146_1008826	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300012010\|Ga0120118_1030866	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300012011\|Ga0120152_1055503	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300012014\|Ga0120159_1038835	Not Available	1581	Open in IMG/M
3300012014\|Ga0120159_1042942	Not Available	1474	Open in IMG/M
3300012096\|Ga0137389_10007514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7107	Open in IMG/M
3300012096\|Ga0137389_10362448	Not Available	1234	Open in IMG/M
3300012200\|Ga0137382_10195974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1386	Open in IMG/M
3300012201\|Ga0137365_10172577	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1620	Open in IMG/M
3300012201\|Ga0137365_10387304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1031	Open in IMG/M
3300012206\|Ga0137380_10765966	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300012208\|Ga0137376_10193763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1757	Open in IMG/M
3300012208\|Ga0137376_11435782	Not Available	581	Open in IMG/M
3300012209\|Ga0137379_10297816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1524	Open in IMG/M
3300012209\|Ga0137379_11104344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300012210\|Ga0137378_11615696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012357\|Ga0137384_11465478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300012359\|Ga0137385_11499034	Not Available	538	Open in IMG/M
3300012361\|Ga0137360_11827825	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012362\|Ga0137361_10982448	Not Available	763	Open in IMG/M
3300012924\|Ga0137413_11026116	Not Available	648	Open in IMG/M
3300012929\|Ga0137404_10620604	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300012929\|Ga0137404_10821518	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300012930\|Ga0137407_11887779	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012944\|Ga0137410_11030668	Not Available	702	Open in IMG/M
3300012989\|Ga0164305_11402580	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300013501\|Ga0120154_1084896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300013763\|Ga0120179_1040138	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300013770\|Ga0120123_1174566	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300014497\|Ga0182008_10040114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2339	Open in IMG/M
3300015195\|Ga0167658_1001244	All Organisms → cellular organisms → Bacteria	11106	Open in IMG/M
3300015241\|Ga0137418_11261390	Not Available	517	Open in IMG/M
3300015242\|Ga0137412_10530713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300015245\|Ga0137409_10919639	Not Available	711	Open in IMG/M
3300017659\|Ga0134083_10391607	Not Available	605	Open in IMG/M
3300018433\|Ga0066667_11412733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300018482\|Ga0066669_10395087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1168	Open in IMG/M
3300019888\|Ga0193751_1012660	All Organisms → cellular organisms → Bacteria	4383	Open in IMG/M
3300021080\|Ga0210382_10487601	Not Available	546	Open in IMG/M
3300021478\|Ga0210402_11926674	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300024288\|Ga0179589_10074425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1338	Open in IMG/M
3300025505\|Ga0207929_1062900	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300025544\|Ga0208078_1017565	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300025910\|Ga0207684_11650382	Not Available	518	Open in IMG/M
3300025912\|Ga0207707_10077595	All Organisms → cellular organisms → Bacteria	2900	Open in IMG/M
3300025917\|Ga0207660_10970045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300025922\|Ga0207646_11024720	Not Available	729	Open in IMG/M
3300025922\|Ga0207646_11404174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300026041\|Ga0207639_11352499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300026312\|Ga0209153_1017827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2314	Open in IMG/M
3300027748\|Ga0209689_1125686	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300027773\|Ga0209810_1000037	All Organisms → cellular organisms → Bacteria	404841	Open in IMG/M
3300027842\|Ga0209580_10218523	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300027842\|Ga0209580_10226607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300027846\|Ga0209180_10170287	Not Available	1256	Open in IMG/M
3300027869\|Ga0209579_10043271	All Organisms → cellular organisms → Bacteria	2416	Open in IMG/M
3300027869\|Ga0209579_10408904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	736	Open in IMG/M
3300027882\|Ga0209590_10192029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1287	Open in IMG/M
3300027882\|Ga0209590_10691481	Not Available	653	Open in IMG/M
3300028047\|Ga0209526_10397456	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300028784\|Ga0307282_10470807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300028792\|Ga0307504_10191158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300028807\|Ga0307305_10183840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	963	Open in IMG/M
3300028807\|Ga0307305_10286769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300028807\|Ga0307305_10465971	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300028828\|Ga0307312_10845283	Not Available	607	Open in IMG/M
3300031820\|Ga0307473_11195699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300031938\|Ga0308175_102685671	Not Available	557	Open in IMG/M
3300031962\|Ga0307479_10353951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1452	Open in IMG/M
3300031962\|Ga0307479_10455854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300032180\|Ga0307471_101190828	Not Available	926	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.93%
Plants	Host-Associated → Plants	3.62%
Aquatic	Environmental → Aquatic	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.90%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.88%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.25%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	7.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007740	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-9-2 Soapdenovo	Environmental	Open in IMG/M
3300007820	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 Soapdenovo	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_02429240	2140918007	Soil	MRIKLSDASQLQRLLSFLAFDANVVVTQIARDEVEVSFLGSLNTSAQVMQSELRLKLWLAAHPDVIAVLQE
JGI10216J12902_1034584132	3300000956	Soil	LRIRLSDPAQLDKLLAFLAFDPNVIVTQLEHDEVEVSFLGSLNTTAQMMESELRLRLWLTSNPDVIAVLQE*
A3PFW1_100611993	3300001535	Permafrost	MRIKLSEPSMLRKLLLVLAFDPSAVVTQLSDDEIEVSFAGSLNTNAQVMETELRLRAWLAAHP
A3PFW1_102015772	3300001535	Permafrost	GHVEQLLAFLAFDTNVIVTQIASDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
A2065W1_106259821	3300001537	Permafrost	MLCSKTTGGVAVRIKLSSAGHVEQLLAFLAFDTNVIVTQIASDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
C688J35102_1197571391	3300002568	Soil	LRIKLSDADQLQRLLGFLAFDANVVVSQIGRDEVELSFLGSLNTSAQMMQSELRLRMWLAAHPDVIAVMQE*
soilH1_101184512	3300003321	Sugarcane Root And Bulk Soil	VRIRLSDASQLDRLLRFLEFDPNVVVSQIGTDEVELSFLGSLNTDAQMMESELRIRLWLAANPDLIAVMQE*
soilH1_103544382	3300003321	Sugarcane Root And Bulk Soil	LRIKLSDEDQLEQLLSFLAFDPNVVVSRLAPDEVEVSFLGSLNTAAQMMESELRLRLWLSSHPDVIAVMQE*
Ga0062595_1000720522	3300004479	Soil	MRIKLSDADQVERLLAFLAFDANVIVSQIERDEVEVSFLGSLNTSAQMMQSELRLRMWLAAHPDVIAVMQE*
Ga0062595_1008019472	3300004479	Soil	MRIRLSDERQLEQLLSFLAFDPNVIVSRIASDEVEVSFLGSLNTAAQMMESELRLRLWLASHPDVIAVMQE*
Ga0066679_101088563	3300005176	Soil	VRIKVSDAGQVERLLAFLAFDSNVIVTQIAVDEVEVSFLGSLNASAQVMQSELRLRMWLAAHPDVIAVLQE*
Ga0066671_100647852	3300005184	Soil	MRIRLSDEGQLEQLLAFLAFDANVIVSRIASNEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0066676_102804861	3300005186	Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADNEVEVSFLGSLNTTAQMMQSELRVRLWLASNPDVIAIL
Ga0066388_1011030311	3300005332	Tropical Forest Soil	LRIKISDERQLDRLLGFLEFDPNVVVTQLAADEVEVSFLGSLNTSAQMMESELRLRLWLSSHPDVIAVMQE*
Ga0070680_1001613453	3300005336	Corn Rhizosphere	LRIKLSDEGQLEQLLAFLAFDANVVVSRLAPDEVEVSFLGSLNTSAQMMESELRLRLWLSSHPDVIAVMQE*
Ga0070709_101974261	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAGPSCARAYLDESEGVAAVRIKLSDADQLQRLLSFLAFDSNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKMWLAAHPDVIAVMQE*
Ga0070714_1005114362	3300005435	Agricultural Soil	MRIRLSDEGQLEQLLSFLAFDPNVIVSRIAADEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0066686_106940661	3300005446	Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADDEVEVSFLGSLNTTAQMMQSELRLRLWLASNPDVIAILQE*
Ga0070706_1006114552	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LAFLAFDANVIVTRIELDEVEVSFLGSLNTTAQMMESELRLRLWLSSHPDVIAVMQE*
Ga0070707_1004403932	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRIKLSEPSMLQKLLRVLAFDPTVIVTQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0070707_1014357391	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MISEEGGQGNQGGRVRIKLSEPSMLQKLLRVLAFDPTVIVTQLTDDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0070698_1005239971	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ADTRVGERSAAVRIKLSDPGQVERLLAFLAMDSNVVVSQIGPDEVEVSILGSFNANAQVLQSELRISLWVAAHPDVIAVMQA*
Ga0070699_1016246592	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VRIKLSDADQLQRLLSFLAFDSNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKMWLAAHPDVIAVMQE*
Ga0070741_1002773110	3300005529	Surface Soil	MRIKLSDERQLERLLAFLSFDPNVIVTQVQHDEIEVSFLGSLNTTAQVMESELRLKLWLASHPGVIAVMHE*
Ga0070741_100543654	3300005529	Surface Soil	MRIRLSDGSQLERLLAFLAFDPNVIVTQVASDEVEVSFLGSLNTSAQVMESELRLRLWLSSHPDVIAVMHE*
Ga0070741_100731052	3300005529	Surface Soil	MRIRLSDERQLGRLLAFLEFDPNVIVTQLAADEVEISFLGSLNTSAQMMESELRLRLWLASHRDVIAVMQE*
Ga0070739_10000015186	3300005532	Surface Soil	MRIRLSDAGQLERLLAFLEFDPNVVVTQLGADEVEVSFLGSLNASAQVMESELRLRLWLSSHPDVIAVMQE*
Ga0070730_109666901	3300005537	Surface Soil	MRIRLSDERQLEQLLSFLAFDPNVVVSQIAADEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0070731_100616235	3300005538	Surface Soil	MSRWEREECRELRVKLSDAAQIERLLQFLAMDSNIVVSRIDRDEVEVSFLGSLNTSAQAMQSHLRVQLWVAANPDVVAIVQR*
Ga0070731_101090092	3300005538	Surface Soil	MRIRLSDESQLEQLLSFLAFDANVIVSRIAPNEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0070732_100499513	3300005542	Surface Soil	MADPSGARAYFGESEGVAAVRIKLSDADQLQRLLAFLAFDTNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKLWLAAHPDVIAVMQE*
Ga0070732_103721072	3300005542	Surface Soil	VRIKLSDADQLQRLLNFLAFDSNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKMWLAAHPDVIAVMQE*
Ga0070695_1001009863	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LSEAKGSAALRIKLSDPTQLDKLLAFLAFDANAIVTRVADDEVELSFLGSLNVTAQMMESELRLRLWLSSHPDVIAVLHE*
Ga0066707_102968662	3300005556	Soil	MRIKLSDATQLERLLSYLAFDTNVIVTQVEPDEVEVSFLGSLNTSAQVMQSELRLRLWLTAHPDVIATLYE*
Ga0066704_104178702	3300005557	Soil	VRIKLSEPSMLQKLLRVLAFDPTVIATQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0066704_107771592	3300005557	Soil	VTAAPVADALPRKKGGAAVRIKVSDPGQVERLLAFLAFDSNVIVTQIAVDEVEVSFLGSLNASAQVMQSELRLRMWLAAHPDVIAVLQE*
Ga0066698_106382322	3300005558	Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADDEVEVSFLGSLNTTAQMMQSELRLRLWLASNPNVIAILQE*
Ga0066700_102110902	3300005559	Soil	VRIKVSDPGQVERLLAFLAFDSNVIVTQIAVDEVEVSFLGSLNASAQVMQSELRLRMWLAAHPDVIAVLQE*
Ga0070717_117893191	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLCSRTTGGAAVRIKLSDAGHVERLLAFLAFDTNVIVTQIAADEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0079222_111902152	3300006755	Agricultural Soil	MRIRLSDEGQLEQLLAFLAFDPNVIVSRIASDEVEVSFLGSLNTAAQMMESELRLRLWLASHPDVIAVMQE*
Ga0079220_117888881	3300006806	Agricultural Soil	MRIRLSDESQLEQLLSFLAFDPNVIVSRIAADEVEVSFLGSLNTSAQMMESELRLRLWLASHP
Ga0075426_104947021	3300006903	Populus Rhizosphere	REVPLRGDIRPAAPEPYSDTAEGVNRVRIKLSDAGQLERLLAFLAFDQNVIVSKIAADEVEVSFLGSLNASAQVMQSELRLRLWLATHPDVIAVMHE*
Ga0075436_1014493802	3300006914	Populus Rhizosphere	PEPYSDTAEGVNRVRIKLSDAGQLERLLAFLAFDQNVIVSKIAADEVEVSFLGSLNASAQVMQSELRLRLWLATHPDVIAVMHE*
Ga0104326_1126603	3300007740	Soil	VRIKLSSAGHVQQLLAFLAFDTNVIVTQIGADEVEVSFLGSLNANAQVMQSELRLRLWLASHPDVIATMQE*
Ga0104324_1239714	3300007820	Soil	KTTGGVAVRIKLSSAGHVQQLLAFLAFDTNVIVTQIGADEVEVSFLGSLNANAQVMQSELRLRLWLASHPDVIATMQE*
Ga0066710_1006161002	3300009012	Grasslands Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADNEVEVSFLGSLNTAAQMMQSELRVRLWLASNPDVIAIMQE
Ga0099829_113406812	3300009038	Vadose Zone Soil	MRIKLSDATQLERLLSYLAFDSNVIVSQVGPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0099830_117950812	3300009088	Vadose Zone Soil	LSDATQLERLLSYLAFDSNVIVSQVGPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0099828_103463423	3300009089	Vadose Zone Soil	VRIKLSEPSMLQKLLRVLAFDPTVIVTQLSDDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0099827_105169413	3300009090	Vadose Zone Soil	MISGDGGQGNQGGRVRIKLSEPSMLQKLLRVLAFDPTVIVTQLTDDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMR
Ga0099827_105235932	3300009090	Vadose Zone Soil	MRIKLSDADQLQRLLAFLAFDANVIVSQIARDEVEVSFLGSLNTSAQMMQSELRLKLWLAAHPDVIAVMQE*
Ga0099827_110333421	3300009090	Vadose Zone Soil	MRIKLSDADQLQRLLAFLAFDANVIVSQIERDEVEVSFLGSLNTSAQMMQSELRLRMWLASHPDVIAVMQE*
Ga0105240_106829051	3300009093	Corn Rhizosphere	FLAFDPNVIVSRIATDEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0066709_1008079742	3300009137	Grasslands Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADNEVEVSFLGSLNTTAQMMQSELRVRLWLASNPDVIAIMQE*
Ga0127503_109294802	3300010154	Soil	MLYTKNNGGSRMRIKLSDATQLELLLNYLAFDSNVIVTQVALDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATMHE*
Ga0099796_103807971	3300010159	Vadose Zone Soil	MLCSKPTGELAVRIKLSSTGHVEQLLAFLAFDTNVIVTQIALDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0134080_102700672	3300010333	Grasslands Soil	LRIRLSDPSQLDRLLTFLEFDANVIVTQIANNEVEVSFLGSLNTTAQMMQSELRLRLWLASNPDVIAILQE*
Ga0134125_105750432	3300010371	Terrestrial Soil	LDESEGVAAVRIKLSDADQLQRLLSFLAFDSNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKMWLAAHPDVIAVMQE*
Ga0134128_106173821	3300010373	Terrestrial Soil	RQLKQLLSFLAFDPNVIVSRIASDEVEVSFLGSLNTAAQMMESELRLRLWLASHPDVIAVMQE*
Ga0134126_101930162	3300010396	Terrestrial Soil	MRIRLSDESQLEQLLSFLAFDPNVVVSRIASDEVEVSFLGSLNTSAQMMASELRLRLWLASHPDVIAVMQE*
Ga0134126_128010331	3300010396	Terrestrial Soil	RLLNFLAFDANVVVTQVAVDEVEVSFLGSLNTSAQVMQSELRLRMWLAAHPDVIATLHE*
Ga0134127_115458432	3300010399	Terrestrial Soil	AMRIKLSDEGQLEQLLSFLAFDPNVIVSRIATDEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0137392_105620122	3300011269	Vadose Zone Soil	MRIKLSDATQLERLLSYLAFDSNVIVSQVAPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137391_101776921	3300011270	Vadose Zone Soil	MRIKLSDATQLARLLSYLAFDSNVIVSQVAPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137391_107998481	3300011270	Vadose Zone Soil	RTRLPEQGIAIAHARRDDQRDGAPSNRGGRVRIKLSEPSMLQKLLRVLAFDPTVIVTQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0137393_100744783	3300011271	Vadose Zone Soil	VRIKLSEPSMLQKLLRVLAFDPTVIVTQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAANPDVIAVMRE*
Ga0137393_101867794	3300011271	Vadose Zone Soil	MRIKLSDATQLARLLSYLAFDSNVIVSQVAPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIAALHE*
Ga0120146_10088262	3300011992	Permafrost	VRIKLSSAGHVEQLLAFLAFDTNVIVTQIASDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0120118_10308661	3300012010	Permafrost	VRIKLSSTGHVEQLLAFLAFDTNVIVTQIASDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0120152_10555032	3300012011	Permafrost	MLCSKTTGGVAVRIKLSSAGHVEQLLAFLAFDTNVIVTQIAADEVEVSFLGSLNTNAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0120159_10388353	3300012014	Permafrost	VRIKLADRTLFEGLRKFLSFDSNAIVTKLSDDEVEVSFLGSLNSVAQQIETELRLRMWMAQHADAIVVLRE*
Ga0120159_10429422	3300012014	Permafrost	MRIKLSEPSMLRKLLLVLAFDPSAVVTQLSDDEIEVSFAGSLNTNAQVMETELRLRAWLAAHPDVIAVMRE*
Ga0137389_100075147	3300012096	Vadose Zone Soil	MRIKLSDATQLERLLSYLAFDSNVIVSQVGSDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137389_103624483	3300012096	Vadose Zone Soil	VRIKLSEPSMLQKLLRVLAFDLTVIATQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0137382_101959743	3300012200	Vadose Zone Soil	VRIKLSDVGHVERLLAFLAFDTNVIVTKIADDEVEVSFLGSLNANAQVMQSELRLKMWLAAHPDVIAVLQE*
Ga0137365_101725772	3300012201	Vadose Zone Soil	VEAKGVSALRIKLSDPSQLDKLLSFLAFDANVIVTQTQRDEVELSFLGSLNTTAQMMESELRLRLWLSSHPDVIAVMQE*
Ga0137365_103873042	3300012201	Vadose Zone Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADDEVEVSFLDSLNTTAQMMQSELRLRLWLASNPDVIAILQE*
Ga0137380_107659662	3300012206	Vadose Zone Soil	MRIKLSDATQLERLLSYLAFDTNVIVTQLEPDEVEVSFLGSLNTSAQVMQSELRLRLWLTAHPDVIATLYE*
Ga0137376_101937632	3300012208	Vadose Zone Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADNEVEVSFLGSLNTTAQMMQSELRVRLWLASNPDVIAILQE*
Ga0137376_114357821	3300012208	Vadose Zone Soil	MLLFASNGGSAVRIKLSDVGHVERLLAFLAFDTNVIVTKIADDEVEVSFLGSLNANAQVMQSELRLRMWLAAHP
Ga0137379_102978163	3300012209	Vadose Zone Soil	MRIKLSDATQLERLLSYLAFDTNVIVTQLEPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137379_111043441	3300012209	Vadose Zone Soil	MRIKLSDATQLERLLSYLAFDTNVIVTQVEPDEVEVSFLGSLNTSAQVMQSELRLRLW
Ga0137378_116156961	3300012210	Vadose Zone Soil	DATQLERLLSYLAFDTNVIVTQVEPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137384_114654782	3300012357	Vadose Zone Soil	LRIRLSDADQLQRLLAFLAFDANVVVSQIARDEVEVSFLGSLNTSAQMMQSELRLKMWLAAHPD
Ga0137385_114990341	3300012359	Vadose Zone Soil	LRIRLSDADQLQRLLAFLAFDANVVVSQIARDEVEVSFLGSLNTSAQMMQSELRLKMWLAAHPDVIAVMQE*
Ga0137360_118278251	3300012361	Vadose Zone Soil	KVSDAGQVERLSAFLAFDSNVIVTQIAVDEVEVSFLGSLNASAQVMQSELRLRMWLAAHPDVIATLHE*
Ga0137361_109824482	3300012362	Vadose Zone Soil	VRIKLSDAGHVEQLLAFLAFDTNVIVSQIAFDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIATMQE*
Ga0137413_110261161	3300012924	Vadose Zone Soil	MRIKLSDADQLQRLLGFLAFDANVVVSQIARDEVEVSFLGSLNTSAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0137404_106206042	3300012929	Vadose Zone Soil	LLRVLAFDPTVIVTQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0137404_108215182	3300012929	Vadose Zone Soil	LSYLAFDSNVIVTQVGPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137407_118877791	3300012930	Vadose Zone Soil	VRIKLSDASQLERLLTYLAFDSNVIVTQVGPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE*
Ga0137410_110306682	3300012944	Vadose Zone Soil	MMRKLLRVLAFDPTVIVTQLSDDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0164305_114025801	3300012989	Soil	MRIKLSDATQLELLLNYLAFDSNVIVTQVALDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATMHE*
Ga0120154_10848961	3300013501	Permafrost	SDAGHVEQLLAFLAFDTNVIVTQIASDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0120179_10401382	3300013763	Permafrost	VRIKLSSAGHVQQLLAFLAFDTNVIVTQIALDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIATMQE*
Ga0120123_11745661	3300013770	Permafrost	PKQGLRLWRTRPMLCSKTTGGVAVRIKLSSAGHVEQLLAFLAFDTNVIVTQIASDEVEVSFLGSLNANAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0182008_100401142	3300014497	Rhizosphere	MRIRLSDEGQLEQLLAFLAFDPNVIVSRLAADEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE*
Ga0167658_100124414	3300015195	Glacier Forefield Soil	VRIKLSSAGHVQQLLAFLAFDTNVIVTQIAFDEVEVSFLGSLNANAQVMQSELRLRMWLASHPDVIATMQE*
Ga0137418_112613902	3300015241	Vadose Zone Soil	MLSETTGGAAVRIKLSDAGHVERLLAFLAFDSNVIVTKIADDEVEVSFLGSLNANAQVMQSELRLRLWLASHPDVIATMQE*
Ga0137412_105307132	3300015242	Vadose Zone Soil	LRIKLSDADQLQRLLGFLAFDANVVVSQIARDEVEVSFLGSLNTSAQVMQSELRLRMWLAAHPDVIAVMQE*
Ga0137409_109196392	3300015245	Vadose Zone Soil	MMRKLLRVLAFDPTVVVTQLSDDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE*
Ga0134083_103916072	3300017659	Grasslands Soil	LRIRLSDPSQLDRLLTFLEFDANVIVSQIADNEVEVSFLGSLNTTAQMMQSELRLRLWLASNPDVIAILQE
Ga0066667_114127332	3300018433	Grasslands Soil	MRIRLSDESQLEKLLSFLAFDPNVIVTKIASDEVEISFLGSLNTSAQMMASELRLRLWLASHPDVIAVMQE
Ga0066669_103950872	3300018482	Grasslands Soil	LRIRLSDADQLQRLLAFLAFDANVVVSQIARDEVEVSFLGSLNTSAQMMQSELRLKMWLAAHPDVIAVMQE
Ga0193751_10126603	3300019888	Soil	MRIKLSDATQLERLLSYLAFDSNVIVTQVGPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE
Ga0210382_104876012	3300021080	Groundwater Sediment	KLSDPSQVDKLLAFLAFDANVIVTQTEHDEVEVSFLGSLNTTAQMMESELRLRLWLSSHPDVIAVMQE
Ga0210402_119266741	3300021478	Soil	VRIRLSDAEQLERLLGFLAFDPNVVVTQIGVDEVEVSFLGSLNTSAQVLQSELRLQMWLAAHPDVIATLQK
Ga0179589_100744251	3300024288	Vadose Zone Soil	LRIKLSDADQLQRLLGFLAFDANVVVSQIARDEVEVSFLGSLNTSAQVMQSELRLRMWLAAHPDVIAVMQE
Ga0207929_10629001	3300025505	Arctic Peat Soil	VRIKLSSAGHVQQLLAFLAFDTNVIVTQIGADEVEVSFLGSLNANAQVMQSELRLRLWLWLW
Ga0208078_10175653	3300025544	Arctic Peat Soil	VRIKLSSAGHVQQLLAFLAFDTNVIVTQIGADEVEVSFLGSLNTSAQIMQSELRLKLWLASHPDVIAVMQE
Ga0207684_116503821	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GGYTPRGSDAILCRSEGGPRLRIKLSDPSQVDKLLAFLAFDANVIVTRIELDEVEVSFLGSLNTTAQMMESELRLRLWLSSHPDVIAVMQE
Ga0207707_100775952	3300025912	Corn Rhizosphere	LRIKLSDEGQLEQLLAFLAFDANVVVSRLAPDEVEVSFLGSLNTSAQMMESELRLRLWLSSHPDVIAVMQE
Ga0207660_109700451	3300025917	Corn Rhizosphere	SAALRIKLSDEGQLEQLLAFLAFDANVVVSRLAPDEVEVSFLGSLNTSAQMMESELRLRLWLSSHPDVIAVMQE
Ga0207646_110247202	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRIKLSEPSMLQKLLRVLAFDPTVIVTQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE
Ga0207646_114041742	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VRIKLSEPAQIERLLAFLAMDSNVVVSQIGLDEVEVSFLGSLNMGAQELESELRVQLWLAMHPDVIAVVQK
Ga0207639_113524992	3300026041	Corn Rhizosphere	MRIKLSDEGQLEQLLTFLAFDPNVIVSRIATDEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE
Ga0209153_10178271	3300026312	Soil	MRIRLSDEGQLEQLLAFLAFDANVIVSRIASNEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE
Ga0209689_11256861	3300027748	Soil	VRIKVSDPGQVERLLAFLAFDSNVIVTQIAVDEVEVSFLGSLNASAQVMQSELRLRMWLAAHPDVIAVLQE
Ga0209810_1000037265	3300027773	Surface Soil	MRIRLSDAGQLERLLAFLEFDPNVVVTQLGADEVEVSFLGSLNASAQVMESELRLRLWLSSHPDVIAVMQE
Ga0209580_102185232	3300027842	Surface Soil	MADPSGARAYFGESEGVAAVRIKLSDADQLQRLLAFLAFDTNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKLWLAAHPDVIAVMQE
Ga0209580_102266072	3300027842	Surface Soil	AGMAGPSCARAYLDESEGVAAVRIKLSDADQLQRLLNFLAFDTNVIVSQIGRDEVEISFLGSLNANAQVMHSELRLKMWLAAHPDVIAVMQE
Ga0209180_101702873	3300027846	Vadose Zone Soil	MLQKLLRVLAFDPTVIVTQLSEDEIEVSFAGSLNTSAQMMETELRLRAWLAAHPDVIAVMRE
Ga0209579_100432712	3300027869	Surface Soil	MSRWEREECRELRVKLSDAAQIERLLQFLAMDSNIVVSRIDRDEVEVSFLGSLNTSAQAMQSHLRVQLWVAANPDVVAIVQR
Ga0209579_104089042	3300027869	Surface Soil	MRIRLSDESQLEQLLSFLAFDANVIVSRIAPNEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE
Ga0209590_101920291	3300027882	Vadose Zone Soil	MRIKLSDADQLQRLLAFLAFDANVIVSQIERDEVEVSFLGSLNTSAQMMQSELRLRMWLASHPDVIAVMQE
Ga0209590_106914811	3300027882	Vadose Zone Soil	MRIKLSDADQLQRLLAFLAFDANVIVSQIARDEVEVSFLGSLNSVAQQMETELRLRMWMAQHGDAIVVLRE
Ga0209526_103974562	3300028047	Forest Soil	VRIKLSEAGQVERLLAFLAFDTNVIVTQIAVDEVEVSFLGSLNASAQVMQSELRLRMWLAAHPDVIAVMQE
Ga0307282_104708071	3300028784	Soil	VSRYFAEAEGGLRLRIKLSDPSQVDKLLAFLAFDANVIVTQTEHDEVEVSFLGSLNTTAQMMESELRLRLWLSS
Ga0307504_101911581	3300028792	Soil	SHYFAKPSYGGIAAAAVEAHALSENKGEPHMRIKLSDATQLERLLSYLAFDSNVIVSQVGPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE
Ga0307305_101838402	3300028807	Soil	MRIKLSDADQVERLLAFLAFDANVIVSQIERDEVEVSFLGSLNTSAQMMQSELRLRMWLAAHPDVIAVMQE
Ga0307305_102867691	3300028807	Soil	VSRYFAEAEGGLRLRIKLSDPSQVDKLLAFLAFDANVIVTQTEHDEVEVSFLGSLNTTAQMMESELRLRLWLSSHPDVIAVMQE
Ga0307305_104659712	3300028807	Soil	MRIKLSDASQLERLLSYLAFDSNVIVTQVAPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE
Ga0307312_108452831	3300028828	Soil	VSRYFAEAEGGLRLRIKLSDPSQVDKLLAFLAFDANVIVTQTQHDEVEVSFLGSLNTTAQMMESELRLRLWLSSHPDVIAVMQE
Ga0307473_111956991	3300031820	Hardwood Forest Soil	ALLEDNGGAAVRIKLSDAGHVERLLAFLAFDTNVIVTQIAADEVEVSFLGSLNANAQVMQSELRLRMWLAAYPDVIAVMQE
Ga0308175_1026856712	3300031938	Soil	MRIRLSDAGQLEQLLSFLAFDPNVIVSRIAFNEVEVSFLGSLNTSAQMMESELRLRLWLASHPDVIAVMQE
Ga0307479_103539511	3300031962	Hardwood Forest Soil	VRIKLSEPAQIERLLAFLAMDSNVVVTQIGLDEVEVSFLGSLNTGAQELESELRVQLWLAMHPDVMAVVQK
Ga0307479_104558542	3300031962	Hardwood Forest Soil	MLEGLTYGCARPMLSLEGAPPLRIKLSDPAQVERLLAFLAMDTNVVVSQIALDEVELSFLGSLNTEAQVLASELRVQLWLAAHPDVIAVMQK
Ga0307471_1011908282	3300032180	Hardwood Forest Soil	MRIKLSDATQLERLLSYLAFDSNVIVSQVAPDEVEVSFLGSLNTSAQVMQSELRLRLWLAAHPDVIATLHE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055632

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences