Metagenome / Metatranscriptome Family F055631

Basic Information
Family ID	F055631
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	49 residues
Representative Sequence	AEETKATFNADANIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ
Number of Associated Samples	126
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.74 %
% of genes near scaffold ends (potentially truncated)	97.10 %
% of genes from short scaffolds (< 2000 bps)	94.93 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.217 % of family members)
Environment Ontology (ENVO)	Unclassified (23.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.232 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 16.22% Coil/Unstructured: 67.57%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF02472	ExbD	92.03
PF03030	H_PPase	7.25
PF00883	Peptidase_M17	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	92.03
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	7.25
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.13 %
Unclassified	root	N/A	33.33 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	21.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	38.41 %
Unclassified	root	N/A	33.33 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	38.41 %
Unclassified	root	N/A	33.33 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	22.46 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	15.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.46 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	8.70 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.46 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
Myxococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	6.52 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.46 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
Myxococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus	2.90 %
unclassified Myxococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae	0.72 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	22.46 %
uncultured bacterium A1Q1_fos_1807	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	21.74 %
Myxococcus stipitatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	2.90 %
Myxococcaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	0.72 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10707756	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	641	Open in IMG/M
3300002568\|C688J35102_119808648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	781	Open in IMG/M
3300003152\|Ga0052254_1027769	Not Available	567	Open in IMG/M
3300004092\|Ga0062389_104182260	Not Available	543	Open in IMG/M
3300004798\|Ga0058859_11431993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	628	Open in IMG/M
3300004801\|Ga0058860_12094718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	500	Open in IMG/M
3300004803\|Ga0058862_12463216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300005260\|Ga0074072_1130652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300005329\|Ga0070683_102321383	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	515	Open in IMG/M
3300005334\|Ga0068869_101459051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	607	Open in IMG/M
3300005337\|Ga0070682_101411535	Not Available	596	Open in IMG/M
3300005340\|Ga0070689_101644926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	584	Open in IMG/M
3300005340\|Ga0070689_101667392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	580	Open in IMG/M
3300005364\|Ga0070673_100407584	All Organisms → cellular organisms → Bacteria	1217	Open in IMG/M
3300005435\|Ga0070714_101085527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300005437\|Ga0070710_11103192	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	583	Open in IMG/M
3300005456\|Ga0070678_100565918	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	1011	Open in IMG/M
3300005457\|Ga0070662_101067176	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	692	Open in IMG/M
3300005466\|Ga0070685_10044462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2542	Open in IMG/M
3300005530\|Ga0070679_101484965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	625	Open in IMG/M
3300005543\|Ga0070672_100934747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → Myxococcus → Myxococcus stipitatus	767	Open in IMG/M
3300005544\|Ga0070686_101748031	Not Available	528	Open in IMG/M
3300005564\|Ga0070664_100576887	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300005569\|Ga0066705_10376547	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	892	Open in IMG/M
3300005614\|Ga0068856_101465632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	697	Open in IMG/M
3300005614\|Ga0068856_102417498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	533	Open in IMG/M
3300005950\|Ga0066787_10074662	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae	689	Open in IMG/M
3300009098\|Ga0105245_10782331	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300009168\|Ga0105104_10519328	Not Available	672	Open in IMG/M
3300009176\|Ga0105242_11458194	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	714	Open in IMG/M
3300009609\|Ga0105347_1355279	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	625	Open in IMG/M
3300010320\|Ga0134109_10223313	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	702	Open in IMG/M
3300010325\|Ga0134064_10454477	Not Available	523	Open in IMG/M
3300010375\|Ga0105239_11957340	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	680	Open in IMG/M
3300010397\|Ga0134124_12921711	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300010399\|Ga0134127_10473309	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	1258	Open in IMG/M
3300010399\|Ga0134127_11110883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300010403\|Ga0134123_12027227	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	634	Open in IMG/M
3300011120\|Ga0150983_11135237	Not Available	604	Open in IMG/M
3300011340\|Ga0151652_12098643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	700	Open in IMG/M
3300011395\|Ga0137315_1062775	Not Available	535	Open in IMG/M
3300012167\|Ga0137319_1010779	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300012212\|Ga0150985_103165786	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1975	Open in IMG/M
3300012212\|Ga0150985_115854596	Not Available	558	Open in IMG/M
3300012469\|Ga0150984_116077050	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	976	Open in IMG/M
3300012469\|Ga0150984_119091136	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1086	Open in IMG/M
3300012892\|Ga0157294_10071730	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	835	Open in IMG/M
3300012901\|Ga0157288_10398704	Not Available	514	Open in IMG/M
3300012923\|Ga0137359_11237811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	634	Open in IMG/M
3300012955\|Ga0164298_10279632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1022	Open in IMG/M
3300012960\|Ga0164301_11449699	Not Available	563	Open in IMG/M
3300012961\|Ga0164302_10203147	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300012982\|Ga0168317_1028804	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300012986\|Ga0164304_10885473	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	697	Open in IMG/M
3300012988\|Ga0164306_11175716	Not Available	642	Open in IMG/M
3300013105\|Ga0157369_11436123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300013105\|Ga0157369_12543077	Not Available	518	Open in IMG/M
3300013307\|Ga0157372_13280681	Not Available	516	Open in IMG/M
3300014318\|Ga0075351_1007898	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300014326\|Ga0157380_12280233	Not Available	606	Open in IMG/M
3300014745\|Ga0157377_10684402	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	743	Open in IMG/M
3300015200\|Ga0173480_10474396	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	743	Open in IMG/M
3300015372\|Ga0132256_102539068	Not Available	613	Open in IMG/M
3300015373\|Ga0132257_101855486	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	775	Open in IMG/M
3300016270\|Ga0182036_11208311	Not Available	629	Open in IMG/M
3300018060\|Ga0187765_11280679	Not Available	518	Open in IMG/M
3300018081\|Ga0184625_10482910	Not Available	629	Open in IMG/M
3300018083\|Ga0184628_10081911	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	1648	Open in IMG/M
3300018433\|Ga0066667_10882716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300018469\|Ga0190270_10826078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300018481\|Ga0190271_12419845	Not Available	628	Open in IMG/M
3300020034\|Ga0193753_10070466	Not Available	1810	Open in IMG/M
3300021180\|Ga0210396_10388138	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	1228	Open in IMG/M
3300021405\|Ga0210387_10018224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5452	Open in IMG/M
3300021475\|Ga0210392_11225752	Not Available	562	Open in IMG/M
3300022506\|Ga0242648_1029914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300022512\|Ga0242676_1022836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	662	Open in IMG/M
3300022708\|Ga0242670_1028883	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	706	Open in IMG/M
3300022708\|Ga0242670_1041821	Not Available	627	Open in IMG/M
3300022711\|Ga0242674_1029799	Not Available	680	Open in IMG/M
3300022714\|Ga0242671_1052559	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300022724\|Ga0242665_10130945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300023062\|Ga0247791_1033665	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	788	Open in IMG/M
3300023077\|Ga0247802_1048012	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	669	Open in IMG/M
3300024055\|Ga0247794_10257626	Not Available	578	Open in IMG/M
3300024245\|Ga0247677_1067527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300024254\|Ga0247661_1118062	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300025504\|Ga0208356_1058529	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	759	Open in IMG/M
3300025898\|Ga0207692_11131321	Not Available	519	Open in IMG/M
3300025928\|Ga0207700_11951393	Not Available	514	Open in IMG/M
3300025930\|Ga0207701_11457547	Not Available	556	Open in IMG/M
3300025934\|Ga0207686_11278178	Not Available	602	Open in IMG/M
3300025936\|Ga0207670_11301493	Not Available	616	Open in IMG/M
3300025942\|Ga0207689_10589900	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	934	Open in IMG/M
3300025945\|Ga0207679_11381790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300026088\|Ga0207641_11658081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300026089\|Ga0207648_10130967	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	2208	Open in IMG/M
3300026215\|Ga0209849_1051760	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	718	Open in IMG/M
3300026281\|Ga0209863_10234471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Myxococcaceae → unclassified Myxococcaceae → Myxococcaceae bacterium	527	Open in IMG/M
3300027513\|Ga0208685_1030625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1189	Open in IMG/M
3300027867\|Ga0209167_10645239	Not Available	579	Open in IMG/M
3300027886\|Ga0209486_11316984	Not Available	500	Open in IMG/M
3300028065\|Ga0247685_1024511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300028381\|Ga0268264_12318013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	544	Open in IMG/M
3300028800\|Ga0265338_11023660	Not Available	558	Open in IMG/M
3300029984\|Ga0311332_11325198	Not Available	582	Open in IMG/M
3300030741\|Ga0265459_12222905	Not Available	666	Open in IMG/M
3300030988\|Ga0308183_1052206	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	824	Open in IMG/M
3300030988\|Ga0308183_1064092	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	769	Open in IMG/M
3300030990\|Ga0308178_1073747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	682	Open in IMG/M
3300030990\|Ga0308178_1149109	Not Available	536	Open in IMG/M
3300031057\|Ga0170834_106882257	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	521	Open in IMG/M
3300031100\|Ga0308180_1036574	Not Available	528	Open in IMG/M
3300031114\|Ga0308187_10255344	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	639	Open in IMG/M
3300031123\|Ga0308195_1073540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300031231\|Ga0170824_117173074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300031231\|Ga0170824_127556463	Not Available	544	Open in IMG/M
3300031446\|Ga0170820_17825935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	871	Open in IMG/M
3300031469\|Ga0170819_11077772	Not Available	537	Open in IMG/M
3300031474\|Ga0170818_104428260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300031474\|Ga0170818_112109472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300031545\|Ga0318541_10575491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	630	Open in IMG/M
3300031546\|Ga0318538_10020366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	2945	Open in IMG/M
3300031595\|Ga0265313_10050421	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1997	Open in IMG/M
3300031640\|Ga0318555_10228926	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	1003	Open in IMG/M
3300031835\|Ga0318517_10385982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300032013\|Ga0310906_11139996	Not Available	565	Open in IMG/M
3300032091\|Ga0318577_10189600	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	983	Open in IMG/M
3300032421\|Ga0310812_10282361	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	735	Open in IMG/M
3300032782\|Ga0335082_11666173	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	511	Open in IMG/M
3300032955\|Ga0335076_11101882	Not Available	677	Open in IMG/M
3300033289\|Ga0310914_11716363	Not Available	532	Open in IMG/M
3300033290\|Ga0318519_10363676	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium A1Q1_fos_1807	857	Open in IMG/M
3300034643\|Ga0370545_060613	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300034667\|Ga0314792_158243	Not Available	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.09%
Host-Associated	Host-Associated	23.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.84%
Plants	Host-Associated → Plants	21.74%
Aquatic	Environmental → Aquatic	7.25%
Human	Host-Associated → Human	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.97%
Sediment	Environmental → Aquatic → Sediment	4.35%
Freshwater	Environmental → Aquatic → Freshwater	2.90%
Digestive System	Host-Associated → Human → Digestive System	2.17%
Peat	Environmental → Terrestrial → Peat	0.72%
Geologic	Environmental → Terrestrial → Geologic	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.72%
Loam	Environmental → Terrestrial → Soil → Loam	11.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Mine	Environmental → Terrestrial → Geologic → Mine	0.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.17%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.07%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.62%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.90%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.17%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.45%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.72%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300011395	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014318	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023062	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S081-202R-4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031100	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_151 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031123	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_196 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055631

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_107077561	3300001686	Soil	NADASTPYDVVIATLDAMRQEEDGKILFPDVSFAAGIL*
C688J35102_1198086482	3300002568	Soil	NAEETKATFNADANIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ*
Ga0052254_10277691	3300003152	Sediment	VDETKATFNADAMIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0062389_1041822602	3300004092	Bog Forest Soil	NFSADANVPYDIVVATLDAMRTTEEGKVLFPDISFAAGIM*
Ga0058859_114319932	3300004798	Host-Associated	DNADETKVNFNADSNVAYDIVVATLDAMRQDEAGKVLFPDVAFSAGIL*
Ga0058860_120947182	3300004801	Host-Associated	ETKATFNADANIPYDVVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0058862_124632162	3300004803	Host-Associated	KLQEIKGAPGNVDETKANFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL*
Ga0074072_11306521	3300005260	Soil	AVTVTVTKKLLEIKSSPDNKDETKVNFNADSNTSYDIDVATLDAMRQDDDGRALFPDVAFSAGIL*
Ga0070683_1023213831	3300005329	Corn Rhizosphere	DNAEETKATFNADANIPYDIVIATLDAMRQSDDGKILFPDVNFAAGIQ*
Ga0068869_1014590511	3300005334	Miscanthus Rhizosphere	NPDNADETKATFNADANIAYDIVIATLDAMRQAEDGKLLFPDVNFAAGIQ*
Ga0070682_1014115352	3300005337	Corn Rhizosphere	KATFNADAMIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0070689_1016449262	3300005340	Switchgrass Rhizosphere	KLKEIKSNPDNADETKATFNADANIPYDTVIATLDAMRQTDEGKLLFPDVNFAAGIQ*
Ga0070689_1016673921	3300005340	Switchgrass Rhizosphere	GNGDETKVNFNADANTSYDIVVATLDAMRQDDSGKVLFPDVAFSAGIL*
Ga0070673_1004075841	3300005364	Switchgrass Rhizosphere	TPDAADETKATFNADANIPYDIVIPTLDAMRTAEDGKILFPDVNFAAGIQ*
Ga0070714_1010855272	3300005435	Agricultural Soil	DETKANFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL*
Ga0070710_111031921	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	NADETKANFNADASTPYDVVIATLDAMRQEEGTGKILFPDVAFAAGIL*
Ga0070678_1005659181	3300005456	Miscanthus Rhizosphere	DETKATFNADAMIPYDIVIATLDAMRQADDGKLLFPDVNFAAGIQ*
Ga0070662_1010671762	3300005457	Corn Rhizosphere	IKSNPDNADETKATFNADAMIPYDIVIATLDAMRQADDGKLLFPDVNFAAGIQ*
Ga0070685_100444621	3300005466	Switchgrass Rhizosphere	DNAEETKATFNADANIPYDIVIATLDAMRQSEEGKLLFPDVNFAAGIQ*
Ga0070679_1014849652	3300005530	Corn Rhizosphere	NFNADATIPYDIVVATLDAMRQNNDGKVLFPDVAFAAGIL*
Ga0070672_1009347471	3300005543	Miscanthus Rhizosphere	AEETKATFNADANIPYDIVISTLDAMRQADDGKILFPDVNFAAGIQ*
Ga0070686_1017480312	3300005544	Switchgrass Rhizosphere	KLIEIKSSPDNATETKVNFNADANTSYDIVVATLDAMRQDEAGKVLFPDVAFSAGIL*
Ga0070664_1005768871	3300005564	Corn Rhizosphere	ETKATFNADANIPYDIVIATLDAMRQSEEGKLLFPDVNFAAGIQ*
Ga0066705_103765472	3300005569	Soil	ANIPYDIVIATLDAMRQADDGKILFPDVNFAAGIQ*
Ga0068856_1014656322	3300005614	Corn Rhizosphere	ANFNADANIPYDIVVATLDAMRTDDAGKILFPDVAFAAGIQ*
Ga0068856_1024174982	3300005614	Corn Rhizosphere	EIKSNPDNAEETKATFNADANIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ*
Ga0066787_100746622	3300005950	Soil	TLTTKLKEIKSSADNADETKATFNADANVPYDIVVATLDAMRTTEEGKALFPDILFAAGIL*
Ga0079222_112004752	3300006755	Agricultural Soil	QYDYKSLATKLKEIKSAPDNAAETKANFSADANVPYDIVVATLDAMRTTEEGKVLFPDISFAAGIL*
Ga0105245_107823313	3300009098	Miscanthus Rhizosphere	DSNTSYDIVVATLDAMHQDDNGKALFPDVAFSAGII*
Ga0105104_105193281	3300009168	Freshwater Sediment	TAKLKEIKGTADAADETKATFNADANIPYDIVIATLDAMRTAEDGKILFPDVNFAAGIQ*
Ga0105242_114581942	3300009176	Miscanthus Rhizosphere	TTKLKEIKSNPDNADETKATFNADAMIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0105347_13552792	3300009609	Soil	DANIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0134109_102233132	3300010320	Grasslands Soil	AEETKATFNADANIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0134064_104544772	3300010325	Grasslands Soil	KEIKSNPDNAEETKATFNADANIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ*
Ga0105239_119573401	3300010375	Corn Rhizosphere	IKSNPDNADETKANFNADASTPYDVVIATLDAMRQEEGTGKILFPDVAFAAGIL*
Ga0134124_129217112	3300010397	Terrestrial Soil	YKTLTTKLKEIKTNPDNAEETKATFNADANIPYDVVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0134127_104733091	3300010399	Terrestrial Soil	KEIKSNPDNADETKATFNADANIAYDIVIATLDAMRQAEDGKLLFPDVNFAAGIQ*
Ga0134127_111108831	3300010399	Terrestrial Soil	TAKLKEIKSNPDNATETKANFNADASTPYDVVIATLDAMRQDEASGKILFPDVAFAAGIL
Ga0134123_120272271	3300010403	Terrestrial Soil	AMIPYDIVIATLDAMRQGDDGKILFPDVNFAAGIQ*
Ga0150983_111352372	3300011120	Forest Soil	ATETKANFNADAATPYDVVIATLDAMRQEDIPGGKILFPDVSFAAGIQ*
Ga0150983_153235992	3300011120	Forest Soil	QYDYKSLATKLKEIKSAPDNAAETKANFSADANVPYDIVVATLDAMRVAEDGKILFPDISFAAGIL*
Ga0151652_120986431	3300011340	Wetland	FNADATTSYDVVVATLDAMRQDDAGKVLFPDVAFSAGIL*
Ga0137315_10627751	3300011395	Soil	GNAEETKVTVNADAHIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0137319_10107793	3300012167	Soil	NPDNAEETKAIFNADANIAYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0150985_1031657861	3300012212	Avena Fatua Rhizosphere	TKVNFNADSNTSYDIVVATLDAMRQDDSGKALFPDVAFSAGIL*
Ga0150985_1158545962	3300012212	Avena Fatua Rhizosphere	EETKATFNADANIPYDIVIATLDAMRQGEDGKILFPDVNFAAGIQ*
Ga0150984_1160770501	3300012469	Avena Fatua Rhizosphere	TTKLLEIKAIPGNGDETKVNFNADANTSYDIVVATLDAMRQDDAGKVLFPDVAFSAGIL*
Ga0150984_1190911363	3300012469	Avena Fatua Rhizosphere	SNPDNAEETKATFNADANIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0157294_100717303	3300012892	Soil	EATFNADANIPYDIVIATLDAMRTAEDGKILFPDVNFAAGIQ*
Ga0157288_103987041	3300012901	Soil	KATFNADANIPYDIVIATLDAMRTAEDGKILFPDVNFAAGIQ*
Ga0157308_101245091	3300012910	Soil	YDYKTLTTKLKEIKSNPDNAEETKATFNADANIAYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0137359_112378111	3300012923	Vadose Zone Soil	ANVSYDIVVATLDAMRQADDGKILFPDVAFAAGIL*
Ga0164298_102796321	3300012955	Soil	IKTNPDNAEETKATFNADAMIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ*
Ga0164301_114496991	3300012960	Soil	ATFNADANIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ*
Ga0164302_102031471	3300012961	Soil	ADAMIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0168317_10288043	3300012982	Weathered Mine Tailings	DANIPYDIVVATLDAMRTDEAGKILFPDVAFAAGIQ*
Ga0164304_108854732	3300012986	Soil	KTNPDNAEETKATFNADAMIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ*
Ga0164306_111757161	3300012988	Soil	NPDNADETKANFNADASTPYDVVIATLDAMRQSEDGKILFPDVNFAAGIQ*
Ga0157369_114361232	3300013105	Corn Rhizosphere	NFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL*
Ga0157369_125430771	3300013105	Corn Rhizosphere	AETKANFNADANIPYDIVVATLDAMRTDDAGKILFPDVAFAAGIQ*
Ga0157372_132806811	3300013307	Corn Rhizosphere	ETKANFNADASTPYDVVIATLDAMRQEEGTGKILFPDVAFAAGIL*
Ga0075351_10078981	3300014318	Natural And Restored Wetlands	DANIAYDVVIATLDAMRQADDGKLLFPDVNFAAGIQ*
Ga0157380_122802331	3300014326	Switchgrass Rhizosphere	KSNPDNAEETKATFNADANIAYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ*
Ga0157377_106844021	3300014745	Miscanthus Rhizosphere	ATFNADANIAYDIVIATLDAMRQAEDGKLLFPDVNFAAGIQ*
Ga0173480_104743961	3300015200	Soil	ADETKATFNADANIPYDIVIATLDAMRTAEDGKILFPDVNFAAGIQ*
Ga0132256_1025390682	3300015372	Arabidopsis Rhizosphere	SNPDNADETKATFNADANVPYDIVIATLDAMRQGDDGKILFPDVNFAAGIQ*
Ga0132257_1018554861	3300015373	Arabidopsis Rhizosphere	DETKATFNADAMIPYDIVIATLDAMRQSEDGKLLFPDVNFAAGIQ*
Ga0182036_112083112	3300016270	Soil	TTKLKEIKSNPDNADETKANFNADANTSYDVVIATLDAMRQGDDGKILFPDVAFAAGIL
Ga0187765_112806791	3300018060	Tropical Peatland	DNAVETKANFNADAIIPYDVVVATLDAMRTTDEGKILFPDVAFAAGIL
Ga0184625_104829101	3300018081	Groundwater Sediment	KALTAKLKEIKGTADAADETKATFNADANIPYDIVIATLDAMRTAEDGKILFPDVNFAAGIQ
Ga0184628_100819113	3300018083	Groundwater Sediment	LTAKLKEIKSAPDNADETKATFNADANVPYDVVIATLDAMRQADDGKILFPDVNFAAGIQ
Ga0066667_108827161	3300018433	Grasslands Soil	QYNYPALTAKLKEIKSNPDNAEETKANFSADANVPYDVVVATLDAMRQADDGKILFPDVSFAAGI
Ga0190270_108260781	3300018469	Soil	KETPDAAGETKATFNADANIPYDIVIPTLDAMRTAEDGKILFPDVNFAAGIQ
Ga0190271_124198452	3300018481	Soil	ETKATFNADANIPYDIVIPTLDAMGTAEDGKILFPDVNFAAGIQ
Ga0193753_100704662	3300020034	Soil	FNADANIVYDVVVATLDAMRQTDEGKVLFPDVAFAAGIL
Ga0210396_103881381	3300021180	Soil	YDYPGLTVKLKEIKSNPDNATETKANFNADASTPYDVVIATLDAMRQEEDGKILFPDVSFAAGIL
Ga0210387_100182246	3300021405	Soil	LTTKLKEIKSNPDYATETKANFNADASTSYDIVIATLDAMRQEEDGKILFPDVSFAAGIL
Ga0210392_112257522	3300021475	Soil	KSAPDNATETKANFSADANVPYDIVVATLDAMRQTEEGKILFPDISFAAGIL
Ga0242648_10299142	3300022506	Soil	VKLKEIKSAPDNAAETKANFSADANIPYDTVIATLDAMRLADDGKILFPDISFAAGIL
Ga0242676_10228361	3300022512	Soil	ANFSADANVPYDIVVATLDTMRQTEEGKILFPDISFAAGIL
Ga0242670_10288832	3300022708	Soil	TTKLKEIKSNPDYATETKANFNADASTSYDIVIATLDAMRQQEDGKILFPDVSFAAGIL
Ga0242670_10418211	3300022708	Soil	DYKSLQVKLKEIKSAPDNATETKANFSADANVPYDIVVATLDTMRQTEEGKILFPDISFAAGIL
Ga0242674_10297991	3300022711	Soil	LTTKLKEIKGSTDNADETKATFNADANVPYDIVVATLDAMRTTEDGKALFPDILFAAGIL
Ga0242671_10525592	3300022714	Soil	FNADASTSYDIVIATLDAMRQEEDGKILFPDVSFAAGIL
Ga0242665_101309451	3300022724	Soil	DYKSLTTKLKEIKSAPDNATETKANFSADANIPYDVVVATLDAMRITDEGKILFPDISFAAGIL
Ga0247791_10336652	3300023062	Soil	ETKATFNADAMIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ
Ga0247802_10480121	3300023077	Soil	FNADAMIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ
Ga0247794_102576262	3300024055	Soil	AEETKATFNADAMVPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ
Ga0247677_10675271	3300024245	Soil	NVDETKANFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL
Ga0247661_11180621	3300024254	Soil	NFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL
Ga0208356_10585292	3300025504	Arctic Peat Soil	AKLKEIKSNPENATETKANFNADAATSYDVVIATLDAMRQEDIPGGKILFPDVSFAAGIQ
Ga0207692_111313211	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NPDNADETKANFNADASTPYDVVIATLDAMRQEEGTGKILFPDVAFAAGIL
Ga0207700_119513931	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LQEIKGAPGNVDETKANFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL
Ga0207701_114575471	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ETKANFSADANISYDVVVATLDAMRMDDAGKILFPDVAFAAGIL
Ga0207686_112781782	3300025934	Miscanthus Rhizosphere	ATFNADAMIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ
Ga0207670_113014932	3300025936	Switchgrass Rhizosphere	LEIKAIPGNGDETKVNFNADANTSYDIVVATLDAMRQDDSGKVLFPDVAFSAGIL
Ga0207689_105899003	3300025942	Miscanthus Rhizosphere	IKSNPDNADETKATFNADANIAYDIVIATLDAMRQAEDGKLLFPDVNFAAGIQ
Ga0207679_113817901	3300025945	Corn Rhizosphere	NAEETKATFNADANIPYDIVIATLDAMRQSEEGKLLFPDVNFAAGIQ
Ga0207641_116580812	3300026088	Switchgrass Rhizosphere	ETKATFNADANIPYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ
Ga0207648_101309674	3300026089	Miscanthus Rhizosphere	KSNPDNADETKATFNADANIAYDIVIATLDAMRQAEDGKLLFPDVNFAAGIQ
Ga0209849_10517601	3300026215	Soil	DANTSYDVVIATLDAMRQEDSGKILFPDVSFAAGIL
Ga0209863_102344711	3300026281	Prmafrost Soil	GLTAKLKEIKTNPDNATETKANFNADASTPYDVVIATLDAMRQEESGKILFPDVSFAAGI
Ga0208685_10306253	3300027513	Soil	TTKLKEIKSNPDNAEETKATFNADANIAYDIVIATLDAMRQAEDGKILFPDVNFAAGIQ
Ga0209167_106452391	3300027867	Surface Soil	ETKANFNADATISYDIVVATLDAMRTTDEGKVLFPDVAFAAGIE
Ga0209486_113169841	3300027886	Agricultural Soil	GTPDAADETKATFNADANIAYDIVIATLDAMRTAEDGKVLFPDVNFAAGIQ
Ga0247685_10245112	3300028065	Soil	TAKLQEIKGAPGNVDETKANFNADATIPYDIVVATLDAMRQNSDGKVLFPDVAFAAGIL
Ga0268264_123180131	3300028381	Switchgrass Rhizosphere	VDETKVNFNADSNTSYDIVVATLDAMRQDDNGKALFPDVAFSAGII
Ga0265338_110236602	3300028800	Rhizosphere	TVRLLEIKSAPGNADETKVNFNADSTTSYDVVVATLDAMRQDEAGKILFPDVAFSAGIL
Ga0311332_113251982	3300029984	Fen	NADANTSYDIVVATLDAMRQDEAGKVLFPDVAFSAGIL
Ga0265459_122229051	3300030741	Soil	PDNATETKANFNADAATPYDVVIATLDAMRQEDIPGGKILFPDVSFAAGIQ
Ga0308183_10522061	3300030988	Soil	LTAKLKEIKTNPDNAEETKATFNADANIPYDVVIATLDAMRQAEDGKILFPDVNFAAGIQ
Ga0308183_10640921	3300030988	Soil	AKLKEIKSSPDNASETKANFSADATVPYEIVVGTLDAMRTTDDGKLLFPDVAFAAGLI
Ga0308178_10737472	3300030990	Soil	KLLEIKSSPDNAEETKVNFNADSNVSYDIVVATLDAMRQDDGGKVMFPDVAFSAGIQ
Ga0308178_11491092	3300030990	Soil	ANFSADATIPYEVVVATLDAMRISDEGKILFPDVAFAAGIL
Ga0170834_1068822572	3300031057	Forest Soil	SNPDNATETKANFNADASTPYDVVIATLDAMRQEEGGKILFPDVSFAAGIL
Ga0308180_10365741	3300031100	Soil	TFNADAQIPYDIVVDTLDAMRETPAGKLLFPDVVFSAGIL
Ga0308187_102553442	3300031114	Soil	ANVPYEIVVATLDAMRTAPDGKILFPDVAFAAGIL
Ga0308195_10735402	3300031123	Soil	NFNADANTSYDIVVATLDAMRQDDNGKVLFPDVAFSAGIL
Ga0170824_1171730743	3300031231	Forest Soil	PDNADETKATFNADANIPYDVVIATLDAMRQADDGKILFPDVNFAAGIQ
Ga0170824_1275564632	3300031231	Forest Soil	PDNATETKANFNADASTPYDVVIATLDAMRQEEDGKILFPDVSFAAGIL
Ga0170820_178259351	3300031446	Forest Soil	QEIKLTPGNAEETKANFNADATIPYDIVVATLDAMRQNNDGKVLFPDVAFAAGIL
Ga0170819_110777722	3300031469	Forest Soil	LLEIKSSPENAEETKANFNADANVPYDTVVVTLDAMRQTDAGKVLFPDVAFAAGIQ
Ga0170818_1044282603	3300031474	Forest Soil	ANIPYDVVIATLDAMRQAEDGKLLFPDVNFAAGIQ
Ga0170818_1121094722	3300031474	Forest Soil	LVEIKSSPENAEETKANFNADANVPYDTVVVTLDAMRQTDAGKVLFPDVAFAAGIL
Ga0318541_105754911	3300031545	Soil	DANTSYDVVIATLDAMRQGDDGKILFPDVAFAAGIL
Ga0318538_100203661	3300031546	Soil	ANTSYDVVIATLDAMRQGEDGKILFPDVSFAAGIL
Ga0265313_100504213	3300031595	Rhizosphere	DNKDETKVNFNADSNTSYDIVVATLDAMRQDDEGRALFPDVAFSAGIL
Ga0318555_102289261	3300031640	Soil	LKEIKSNPDNADETKANFNADANTSYDVVIATLDAMRQGDDGKILFPDVAFAAGIL
Ga0318517_103859821	3300031835	Soil	ADETKANFNADANTSYDVVIATLDAMRQGDDGKILFPDVAFAAGIL
Ga0310906_111399961	3300032013	Soil	SNPDNADETKATFNADAMIPYDIVIATLDAMRQADDGKLLFPDVNFAAGIQ
Ga0318577_101896001	3300032091	Soil	IKSNPDNADETKANFNADANTSYDVVIATLDAMRQGEDGKILFPDVSFAAGIL
Ga0310812_102823612	3300032421	Soil	TKATFNADAMIPYDIVIATLDAMRQSEEGKILFPDVNFAAGIQ
Ga0335082_116661732	3300032782	Soil	YASLTAKLQEIKAAPDNADETKANFNADATIPYDVVVATLDAMRQNNDGKVLFPDVAFAAGIL
Ga0335076_111018822	3300032955	Soil	KSNPDNAEETKANFNADANTPYDIVIATLDAMRTAEDGKVLFPDVAFAAGIL
Ga0310914_117163632	3300033289	Soil	NFNADANTSYDVVIATLDAMRQGEDGKILFPDVSFAAGIL
Ga0318519_103636761	3300033290	Soil	LTAKLKEIKSNPDNADETKANFNADANTSYDVVIATLDAMRQGEDGKILFPDVAFAAGIL
Ga0370545_060613_3_176	3300034643	Soil	KLKEIKSSPDNAAETKANFNADAAIPYDIVVATLDAMRTTDEGKVLFPDVAFAAGIL
Ga0314792_158243_1_183	3300034667	Soil	LTTKLKEIKSNPDNAEETKATFNADANIPYDVVVATLDAMRQADDGKVLFPDVNFAAGIQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign