NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F055599

Metagenome Family F055599

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055599
Family Type Metagenome
Number of Sequences 138
Average Sequence Length 49 residues
Representative Sequence EQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Number of Associated Samples 105
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.28 %
% of genes from short scaffolds (< 2000 bps) 90.58 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (79.710 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(26.087 % of family members)
Environment Ontology (ENVO) Unclassified
(43.478 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(57.971 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.78%    β-sheet: 0.00%    Coil/Unstructured: 66.22%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF00441Acyl-CoA_dh_1 15.94
PF02771Acyl-CoA_dh_N 7.97
PF01564Spermine_synth 2.90
PF13231PMT_2 2.90
PF04402SIMPL 2.90
PF10131PTPS_related 2.17
PF01370Epimerase 2.17
PF11617Cu-binding_MopE 1.45
PF02604PhdYeFM_antitox 0.72
PF00501AMP-binding 0.72
PF00892EamA 0.72
PF01494FAD_binding_3 0.72
PF00133tRNA-synt_1 0.72
PF03243MerB 0.72
PF03745DUF309 0.72
PF09594GT87 0.72
PF02653BPD_transp_2 0.72
PF13419HAD_2 0.72
PF00561Abhydrolase_1 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 23.91
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 2.90
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 2.90
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 2.90
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.45
COG0060Isoleucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.72
COG0143Methionyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.72
COG0495Leucyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.72
COG0525Valyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.72
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.72
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.72
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.72
COG1547Predicted metal-dependent hydrolaseFunction unknown [S] 0.72
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 0.72
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 0.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms79.71 %
UnclassifiedrootN/A20.29 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000550|F24TB_16677234All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium593Open in IMG/M
3300003998|Ga0055472_10137037All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300005166|Ga0066674_10425021Not Available611Open in IMG/M
3300005172|Ga0066683_10106869All Organisms → cellular organisms → Bacteria → Acidobacteria1701Open in IMG/M
3300005172|Ga0066683_10129149All Organisms → cellular organisms → Bacteria → Acidobacteria1544Open in IMG/M
3300005172|Ga0066683_10142075All Organisms → cellular organisms → Bacteria1471Open in IMG/M
3300005172|Ga0066683_10651058All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300005177|Ga0066690_10121761All Organisms → cellular organisms → Bacteria1694Open in IMG/M
3300005180|Ga0066685_10074518All Organisms → cellular organisms → Bacteria2229Open in IMG/M
3300005181|Ga0066678_10942200Not Available563Open in IMG/M
3300005331|Ga0070670_102262329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium501Open in IMG/M
3300005332|Ga0066388_102222900All Organisms → cellular organisms → Bacteria → Proteobacteria990Open in IMG/M
3300005332|Ga0066388_104204387All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria734Open in IMG/M
3300005332|Ga0066388_108236207All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300005332|Ga0066388_108668988Not Available505Open in IMG/M
3300005340|Ga0070689_101848982Not Available551Open in IMG/M
3300005353|Ga0070669_101287368All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium633Open in IMG/M
3300005446|Ga0066686_10880041All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium590Open in IMG/M
3300005451|Ga0066681_10028787Not Available2917Open in IMG/M
3300005451|Ga0066681_10603764All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300005459|Ga0068867_101301429Not Available671Open in IMG/M
3300005468|Ga0070707_101493127All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300005540|Ga0066697_10090564All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300005540|Ga0066697_10749060Not Available532Open in IMG/M
3300005555|Ga0066692_10203165All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300005559|Ga0066700_10387647All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300005559|Ga0066700_11104828Not Available518Open in IMG/M
3300005561|Ga0066699_10221190All Organisms → cellular organisms → Bacteria1327Open in IMG/M
3300005576|Ga0066708_10633493All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium682Open in IMG/M
3300005598|Ga0066706_10314674All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1235Open in IMG/M
3300005598|Ga0066706_10563272All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300005598|Ga0066706_10565557All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium903Open in IMG/M
3300005713|Ga0066905_100099809All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1968Open in IMG/M
3300005719|Ga0068861_100242302All Organisms → cellular organisms → Bacteria1534Open in IMG/M
3300005764|Ga0066903_103582201All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium836Open in IMG/M
3300005764|Ga0066903_103641680All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300005764|Ga0066903_105447856All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium671Open in IMG/M
3300005764|Ga0066903_107336163Not Available570Open in IMG/M
3300005764|Ga0066903_107994383All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300006031|Ga0066651_10158586All Organisms → cellular organisms → Bacteria1188Open in IMG/M
3300006046|Ga0066652_100330173Not Available1365Open in IMG/M
3300006046|Ga0066652_100665344All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300006049|Ga0075417_10463775All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium633Open in IMG/M
3300006796|Ga0066665_10140524All Organisms → cellular organisms → Bacteria1822Open in IMG/M
3300006796|Ga0066665_10601332All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300006797|Ga0066659_10644345Not Available862Open in IMG/M
3300006847|Ga0075431_101674273Not Available593Open in IMG/M
3300006852|Ga0075433_10571393All Organisms → cellular organisms → Bacteria → Proteobacteria993Open in IMG/M
3300006904|Ga0075424_101031974All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M
3300006914|Ga0075436_101183593All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium577Open in IMG/M
3300007076|Ga0075435_100772889All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales836Open in IMG/M
3300007076|Ga0075435_101872787All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium527Open in IMG/M
3300007255|Ga0099791_10204435Not Available931Open in IMG/M
3300009012|Ga0066710_100531918All Organisms → cellular organisms → Bacteria → Acidobacteria1776Open in IMG/M
3300009012|Ga0066710_101925708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium883Open in IMG/M
3300009012|Ga0066710_103452570All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300009012|Ga0066710_103894160Not Available559Open in IMG/M
3300009012|Ga0066710_104367295All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300009088|Ga0099830_11763692All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium517Open in IMG/M
3300009137|Ga0066709_100068246All Organisms → cellular organisms → Bacteria4156Open in IMG/M
3300009137|Ga0066709_101809103All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300009137|Ga0066709_102467281All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300009137|Ga0066709_103636477All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300009137|Ga0066709_104583753Not Available505Open in IMG/M
3300009162|Ga0075423_12302773Not Available586Open in IMG/M
3300009792|Ga0126374_10931300All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300010048|Ga0126373_12372891All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium590Open in IMG/M
3300010336|Ga0134071_10048311All Organisms → cellular organisms → Bacteria1923Open in IMG/M
3300010336|Ga0134071_10324997All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300010376|Ga0126381_102440536All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300010391|Ga0136847_12550317All Organisms → cellular organisms → Bacteria2311Open in IMG/M
3300010398|Ga0126383_12264924All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300010401|Ga0134121_12096112All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300012189|Ga0137388_10159734Not Available2004Open in IMG/M
3300012202|Ga0137363_11101395All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012205|Ga0137362_10626813All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium926Open in IMG/M
3300012207|Ga0137381_11446586Not Available579Open in IMG/M
3300012349|Ga0137387_10796608All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300012349|Ga0137387_11252523All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300012356|Ga0137371_10206528Not Available1538Open in IMG/M
3300012357|Ga0137384_10532613Not Available963Open in IMG/M
3300012361|Ga0137360_11144319Not Available673Open in IMG/M
3300012362|Ga0137361_11044811All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria737Open in IMG/M
3300012582|Ga0137358_10040861All Organisms → cellular organisms → Bacteria3073Open in IMG/M
3300012948|Ga0126375_11561647All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300012972|Ga0134077_10089659All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300012975|Ga0134110_10030935All Organisms → cellular organisms → Bacteria2090Open in IMG/M
3300012976|Ga0134076_10320467All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300015241|Ga0137418_10862521All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium670Open in IMG/M
3300015245|Ga0137409_10307734All Organisms → cellular organisms → Bacteria1391Open in IMG/M
3300015264|Ga0137403_10673901All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300015357|Ga0134072_10474052All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300015359|Ga0134085_10041580All Organisms → cellular organisms → Bacteria1819Open in IMG/M
3300017657|Ga0134074_1099984All Organisms → cellular organisms → Bacteria996Open in IMG/M
3300018431|Ga0066655_11415602Not Available505Open in IMG/M
3300018433|Ga0066667_10174180All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300018433|Ga0066667_10943322All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300018468|Ga0066662_12502927All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300018482|Ga0066669_10138083All Organisms → cellular organisms → Bacteria1770Open in IMG/M
3300018482|Ga0066669_10162191Not Available1661Open in IMG/M
3300025918|Ga0207662_10955944All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium608Open in IMG/M
3300025945|Ga0207679_12172398Not Available504Open in IMG/M
3300025953|Ga0210068_1061173Not Available586Open in IMG/M
3300025960|Ga0207651_11004421All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300025972|Ga0207668_11404902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium629Open in IMG/M
3300026326|Ga0209801_1045244All Organisms → cellular organisms → Bacteria2022Open in IMG/M
3300026326|Ga0209801_1192852All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium824Open in IMG/M
3300026327|Ga0209266_1046687All Organisms → cellular organisms → Bacteria → Acidobacteria2162Open in IMG/M
3300026343|Ga0209159_1096821All Organisms → cellular organisms → Bacteria → Acidobacteria1292Open in IMG/M
3300026530|Ga0209807_1013277All Organisms → cellular organisms → Bacteria → Proteobacteria4054Open in IMG/M
3300026530|Ga0209807_1099547All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1257Open in IMG/M
3300026532|Ga0209160_1232413All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300026536|Ga0209058_1029702All Organisms → cellular organisms → Bacteria3394Open in IMG/M
3300026538|Ga0209056_10730193All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium502Open in IMG/M
3300027717|Ga0209998_10065963All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria859Open in IMG/M
3300027873|Ga0209814_10459360All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium563Open in IMG/M
3300028536|Ga0137415_11343955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4534Open in IMG/M
3300031256|Ga0315556_1207890All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium690Open in IMG/M
3300031547|Ga0310887_11125469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300031572|Ga0318515_10053934All Organisms → cellular organisms → Bacteria2029Open in IMG/M
3300031640|Ga0318555_10642493All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300031747|Ga0318502_10438850All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium779Open in IMG/M
3300031751|Ga0318494_10818580All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300031820|Ga0307473_11473403Not Available515Open in IMG/M
3300031910|Ga0306923_10687759All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1140Open in IMG/M
3300031912|Ga0306921_11313807All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium799Open in IMG/M
3300032010|Ga0318569_10584025All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium520Open in IMG/M
3300032052|Ga0318506_10366160All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium639Open in IMG/M
3300032144|Ga0315910_10610580All Organisms → cellular organisms → Bacteria → Proteobacteria845Open in IMG/M
3300032180|Ga0307471_100363441All Organisms → cellular organisms → Bacteria1562Open in IMG/M
3300032180|Ga0307471_101568577All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria815Open in IMG/M
3300032261|Ga0306920_100725621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1463Open in IMG/M
3300033290|Ga0318519_10599755All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium669Open in IMG/M
3300033413|Ga0316603_11360945Not Available673Open in IMG/M
3300033414|Ga0316619_11907788All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300033419|Ga0316601_101222384All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium754Open in IMG/M
3300033480|Ga0316620_10074469All Organisms → cellular organisms → Bacteria2454Open in IMG/M
3300033487|Ga0316630_11725475Not Available570Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil26.09%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.32%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.59%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.25%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.07%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.62%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.17%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.45%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.45%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment0.72%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.72%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010391Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025953Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031256Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F24TB_1667723413300000550SoilVAGTGENRMHRYDWEPVPLIPSRVIAGIKALGVDVSNWGA*
Ga0055472_1013703713300003998Natural And Restored WetlandsKFVADTAANRMYRYDWPPVSVRPQRIIAGLKALGVDLGNWGE*
Ga0066674_1042502113300005166SoilCRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0066683_1010686923300005172SoilEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0066683_1012914923300005172SoilQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSNWVD*
Ga0066683_1014207513300005172SoilRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRGLGVDVTSWGG*
Ga0066683_1065105813300005172SoilADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0066690_1012176133300005177SoilRFVASTATSRMWNYAWPPVTFHPERVIAGIKALGVDVSNWGA*
Ga0066685_1007451833300005180SoilRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0066678_1094220013300005181SoilLEQARRFVADTAANRMWRYDWPPARVVPERVIAGIRALGVDVSNWGG*
Ga0070670_10226232923300005331Switchgrass RhizosphereLAQARRFVAGTGENRMHRYDWEPVALIPSRVIAGIKALGVDVSNWGA*
Ga0066388_10222290033300005332Tropical Forest SoilQQVARRGVLFTLEQARRFVAGTGENRMHRYDWEPVPLVPSRVIAGVKALGVDVTNWGA*
Ga0066388_10420438713300005332Tropical Forest SoilRFVASTGEARMWRYDWEPAYVRPERIIAGIKAIGVDVSSWGA*
Ga0066388_10823620723300005332Tropical Forest SoilFTLEQARRFVADTAANRMWRDDWPPARVVPERIIAGIKSLGVDVTNWIP*
Ga0066388_10866898813300005332Tropical Forest SoilLAYERQIARRGVLFTLAQARRFVAGTGDNRMHRYDWEPVALIPSRVIAGIKALGVDVSNWGA*
Ga0070689_10184898223300005340Switchgrass RhizosphereHAATYEKQVARRGVVFTIEQARRFVTGTGESRMHRYDWEPVPLIPARVIAGIKAIGVDVSTWGA*
Ga0070669_10128736813300005353Switchgrass RhizosphereRFVADTGKNRMWRYDWPPVVFRPERVIAGIRALGVDVSNWGA*
Ga0066686_1088004113300005446SoilCRRGVLFTPEQARRFVASTGTSRMWNYAWPPVTFHPDRVIAGIKALGVDVSNWGA*
Ga0066681_1002878743300005451SoilFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG*
Ga0066681_1060376413300005451SoilQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0068867_10130142913300005459Miscanthus RhizosphereRFVADTGNNRMHRYDWPPVAVKPARIIAGLKALGVDLSNWGE*
Ga0070707_10149312713300005468Corn, Switchgrass And Miscanthus RhizosphereYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGINALGVDVSNWGG
Ga0066697_1009056423300005540SoilYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVQPERIIAGIKALGVDVSSWGG
Ga0066697_1074906023300005540SoilDTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0066692_1020316513300005555SoilLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0066700_1038764723300005559SoilQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVNNWGG*
Ga0066700_1110482823300005559SoilDTGKNRMWRYDWPPVALRPERVIAGIRALGVDVTNWGG*
Ga0066699_1022119013300005561SoilEHALRYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVRPERIIAGIKALGVDVSNWGG*
Ga0066708_1063349313300005576SoilARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG*
Ga0066706_1031467413300005598SoilFVADTAANRMWRYDWPPARVVPQRIIAGIKVLGVDVSNWGG*
Ga0066706_1056327223300005598SoilDTAANRMWRYDWPPARVRPERIIAGIKALGVDVSNWGGEPKSLP*
Ga0066706_1056555723300005598SoilEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG*
Ga0066905_10009980933300005713Tropical Forest SoilRRGVLFTLEQARRFVASTGEARMWRYDWEPAYVRPERIIAGIKAIGVDVSSWGA*
Ga0068861_10024230213300005719Switchgrass RhizosphereSRRGVVLTIEQAQRFVAGTGQNRMHRYDWEPVPLIPDRVIGGLKALGIDVSPWGA*
Ga0066903_10358220123300005764Tropical Forest SoilGDNRMHRYDWEPVSLVPSRVIAGIKALGVDVSNWGA*
Ga0066903_10364168023300005764Tropical Forest SoilGKNRMWRYDWPPVSLRPERVIAGIRSLGVDVTNWGG*
Ga0066903_10544785613300005764Tropical Forest SoilNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA*
Ga0066903_10733616323300005764Tropical Forest SoilMRRSIHSFARRRVLSALEQQARCFVPDTGENRMHGYDREPVSLVSYRVIAGIKARGVDVGNGST*
Ga0066903_10799438323300005764Tropical Forest SoilEQARRFVAGTGDNRMHRYDWEPVSLVPSRVIAGIKALGVDVSNWGA*
Ga0066651_1015858613300006031SoilYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSNWGG
Ga0066652_10033017333300006046SoilRQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0066652_10066534433300006046SoilLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0075417_1046377513300006049Populus RhizosphereQAQRFVADTGKNRMWRYDWPPVQFNPERVIAGIKALGIDVTNWGGQP*
Ga0066665_1014052433300006796SoilICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0066665_1060133233300006796SoilICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0066659_1064434523300006797SoilADTGKNRMWRYDWPPVALRPERVIAGIRALGVDVTNWGG*
Ga0075431_10167427313300006847Populus RhizosphereLFTIEQARRFVSGTGESRMHRYDWEPVPLIPARVIAGIKALGVDVSNWGA*
Ga0075433_1057139333300006852Populus RhizosphereQARRFVAGTAESRMHRYDWEPVALVPARVIAGIRALGVDVSNWGVE*
Ga0075424_10103197413300006904Populus RhizosphereRFVAGTAESRMHRYDWEPVALVPARVIAGIRALGVDVSNWGGE*
Ga0075436_10118359323300006914Populus RhizosphereQARRFVASTGTSRMWNYAWPPVTFHPDRVIAGIKALGVDVSNWGA*
Ga0075435_10077288933300007076Populus RhizosphereRRGVLFTLEQARRFVAGTAESRMHRYDWEPVALVPARVIAGIRALGVDVSNWGGE*
Ga0075435_10187278713300007076Populus RhizosphereRFVADTGKNRMWRYDWPPVQFNPERVIAGIKALGVDVTNWGA*
Ga0099791_1020443523300007255Vadose Zone SoilRYERQICRRGVLFTLEQARRFVADTAANRMWRYEWPPARVVPERIIAGIRALGVDVTSWGG*
Ga0066710_10053191813300009012Grasslands SoilVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066710_10192570823300009012Grasslands SoilVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRGLGVDVTSWGG
Ga0066710_10345257023300009012Grasslands SoilFVADTAANRMWRYDWPPARVRPERIIAGIKALGVDVSNWGGEPKSLP
Ga0066710_10389416013300009012Grasslands SoilQARRFVADTAANRMWRYDWPPARVVPERVIAGIRALGVDVSNWGG
Ga0066710_10436729513300009012Grasslands SoilEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSNWVD
Ga0099830_1176369223300009088Vadose Zone SoilVLFTLEQARRFVASTATSRMWNYAWPPVTFHPERVIAGIKAMGVDVSNWGA*
Ga0066709_10006824613300009137Grasslands SoilRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG*
Ga0066709_10180910313300009137Grasslands SoilNRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG*
Ga0066709_10246728113300009137Grasslands SoilEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSNWVD*
Ga0066709_10363647713300009137Grasslands SoilDWPPARVRPERIIAGIKALGVDVSNWGGEPKSLP*
Ga0066709_10458375313300009137Grasslands SoilTGKNRMWRYDWPPVALRPERVIAGIRALGVDVTNWGA*
Ga0075423_1230277323300009162Populus RhizosphereYEKQVSRRGVLFTLEQARRFVAGTAESRMHRYDWEPVALVPARVIAGIRALGVDVSNWGVE*
Ga0126374_1093130023300009792Tropical Forest SoilFVADTGKNRMWRYDWPPVSLRPERVIAGIRSLGVDVTNWGG*
Ga0126373_1237289123300010048Tropical Forest SoilVAGTGENRMHRYDWESVSLVPSRVIAGIKALGVDVTNWGA*
Ga0134071_1004831133300010336Grasslands SoilRGVLFTLEQARRFVADTAANRMWRYDWPPARVQPERIIAGIKALGVDVSSWGG*
Ga0134071_1032499713300010336Grasslands SoilTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0126381_10244053613300010376Tropical Forest SoilEHALAYERQSSRHGVLFTLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA*
Ga0136847_1255031733300010391Freshwater SedimentGVLFRLEQAQRFVADTGKNRMWRYDWPPVTFRPERVIAGIRALGVDVSNWGA*
Ga0126383_1226492413300010398Tropical Forest SoilDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA*
Ga0134121_1209611213300010401Terrestrial SoilRFVAGTGQNRMHRYDWEPVPLIPDRVIGGLKALGVDVSPWGA*
Ga0137388_1015973433300012189Vadose Zone SoilVLFTLEQAKRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVGSWGG*
Ga0137363_1110139523300012202Vadose Zone SoilGVLFTLEQARRFVADTAANRMWRYEWPPARVVPERIIAGIRALGVDVTNWVG*
Ga0137362_1062681323300012205Vadose Zone SoilVLFTLEQARRFVASTATSRMWNYAWPPVTFHPERVIAGIKALGVDVSNWGA*
Ga0137381_1144658613300012207Vadose Zone SoilNRMWRYDWPPARVVPERIIAGIRGLGVDVSNWGG*
Ga0137387_1079660813300012349Vadose Zone SoilVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0137387_1125252313300012349Vadose Zone SoilERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0137371_1020652813300012356Vadose Zone SoilRQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRGLGVDVSNWGG*
Ga0137384_1053261313300012357Vadose Zone SoilERQICRRGVLFTLEQARRFVGDTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0137360_1114431923300012361Vadose Zone SoilARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0137361_1104481113300012362Vadose Zone SoilNRMWRYDWPPVALRPERVIAGIRALGVDVTNWGG*
Ga0137358_1004086113300012582Vadose Zone SoilEQARRFVADTAANRMWRYDWPPARVVPECIIAGIRALGVDVTNWVG*
Ga0126375_1156164723300012948Tropical Forest SoilANRMYRYDWPPVSVKPARIIAGLKALGVDLSNWGE*
Ga0134077_1008965913300012972Grasslands SoilVADTAANRMWRYDWPPAHVVPERIIAGIRALGVDVSNWGG*
Ga0134110_1003093513300012975Grasslands SoilNRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0134076_1032046713300012976Grasslands SoilDAEHALRYERQICRRGVLFTLEQARRFVADTAAKRMWRYDWPPARVVPERIIAGIRGLGVDVTSWGG*
Ga0137418_1086252113300015241Vadose Zone SoilVADTGKNRMWRYDWPPVSFRPERVVNGIRALGVDVANWGG*
Ga0137409_1030773413300015245Vadose Zone SoilRYERQMCRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG*
Ga0137403_1067390123300015264Vadose Zone SoilFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTNWVG*
Ga0134072_1047405213300015357Grasslands SoilAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG*
Ga0134085_1004158033300015359Grasslands SoilVLFTLEQARRFVADTAANRMWRYDWPPARVQPERIIAGIKALGVDVSSWGG*
Ga0134074_109998423300017657Grasslands SoilLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066655_1141560213300018431Grasslands SoilDTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066667_1017418033300018433Grasslands SoilICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066667_1094332223300018433Grasslands SoilCRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066662_1250292723300018468Grasslands SoilYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066669_1013808313300018482Grasslands SoilQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0066669_1016219123300018482Grasslands SoilHALRYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG
Ga0207662_1095594413300025918Switchgrass RhizosphereRRGVLLRLDQAQRFVADTGKNRMWRYDWPPVVFRPERVIAGIRALGVDVSNWGA
Ga0207679_1217239813300025945Corn RhizosphereRRGVLVTLEQARRFVADTGNNRMHRYDWPPVAVKPARIIAGLKALGVDLSNWGE
Ga0210068_106117313300025953Natural And Restored WetlandsRGVLFTLAQARRFVAGTGENRMHRYDWEPVPLIPSRVIAGVEALGVDVSNWGA
Ga0207651_1100442123300025960Switchgrass RhizosphereADTGNNRMHRYDWPPVAVKPARIIAGLKALGVDLSNWGE
Ga0207668_1140490213300025972Switchgrass RhizosphereTLEQARRFVADTGNNRMHRYDWPPVAVKPARIIAGLKALGVDLSNWGE
Ga0209801_104524413300026326SoilYERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG
Ga0209801_119285223300026326SoilRGVLFTLEQAKRFVADTAANRTWRYDWPPARVVPQRIIAGIKVLGVDVSNWGG
Ga0209266_104668713300026327SoilRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0209159_109682113300026343SoilTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVSNWGG
Ga0209807_101327713300026530SoilICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG
Ga0209807_109954723300026530SoilICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIRALGVDVTSWGG
Ga0209160_123241323300026532SoilERQICRRGVLFTLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG
Ga0209058_102970243300026536SoilLEQARRFVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVSSWGG
Ga0209056_1073019323300026538SoilTSRMWNYAWPPVTFHPERVIAGIKALGVDVSNWGA
Ga0209998_1006596323300027717Arabidopsis Thaliana RhizosphereSRRGVVLTIEQAQRFVAGTGQSRMHRYDWEPVPLIPDRVIAGLNALGVDVSPWGA
Ga0209814_1045936023300027873Populus RhizosphereQAQRFVADTGKNRMWRYDWPPVQFNPERVIAGIKALGIDVTNWGGQP
Ga0137415_1134395523300028536Vadose Zone SoilCRRGVLFRLDQAQRFVADTAKNRMHRYDWPPARVIPERIIAGVRALGVDVTNWGG
Ga0315556_120789023300031256Salt Marsh SedimentRGVLFTLEQARRFVADTGNNRMHRYDWPPVSVNPQRIINGIKMLGVDVGNWEG
Ga0310887_1112546913300031547SoilAGTGENRMHRYDWEPVALIPSRVIAGIKALGVDVSNWGA
Ga0318515_1005393413300031572SoilHALAYERQISRRGVLFTLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0318555_1064249313300031640SoilRQISRRGVLFTLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0318502_1043885023300031747SoilYERQISRRGVLFTLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0318494_1081858013300031751SoilLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0307473_1147340323300031820Hardwood Forest SoilAKNRMWRYDWPPVSLRPERVIAGIRALGVDVTNWGG
Ga0306923_1068775923300031910SoilRFVAGTGDNRMHRYDGEPVALVPSRVIAGIKALGVDVSNWGA
Ga0306921_1131380723300031912SoilTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0318569_1058402513300032010SoilFERATCRRGVLFTLEQARRFVASTGETRMWRYDWEPAYMRPERIIAGIKALGVDVTNWGA
Ga0318506_1036616023300032052SoilISRRGVLFTLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0315910_1061058013300032144SoilEQAQRFVAGTGQNRMHRYDWEPVPLIPDRVIGGLKALGIDVSPWGA
Ga0307471_10036344133300032180Hardwood Forest SoilVADTAANRMWRYDWPPARVVPERIIAGIKALGVDVTSWGG
Ga0307471_10156857713300032180Hardwood Forest SoilHAARYEQQICRRGVLFTIEQARRFVASTGEARMWRYDWEPAYVRPERIIAGIKAIGVDVSSWGA
Ga0306920_10072562113300032261SoilRGVLFTLAQARRFVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0318519_1059975523300033290SoilVVAGTGDNRMHRYDWEPVALVPSRVIAGIKALGVDVSNWGA
Ga0316603_1136094513300033413SoilFVADTGARRMWQYDWPPVPVRPERIIAGIKALGVDVSNWGA
Ga0316619_1190778813300033414SoilISRRGVVLSLEQAQRFVAGTGQNRMHRYDWEPVPLIPERVIGGLKALGVDVSPWGA
Ga0316601_10122238423300033419SoilGTGENRMHRYDWDPVPLVPSRVLAGIKALGVDVSNWGA
Ga0316620_1007446913300033480SoilRFVASTGENRMYRYDWEPVALVPSRVIAGIKAIGVDVTNWGG
Ga0316630_1172547513300033487SoilRRFVAGTGDSRMHRYDWEPVALIPARVIAGIKAIGVDVSNWGA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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