Metagenome / Metatranscriptome Family F055596

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055596
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	84 residues
Representative Sequence	MRIFRPEVESILKALGAMSLVALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPIIRVDYAADPCGALHRLGLVLEPPR
Number of Associated Samples	98
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.61 %
% of genes near scaffold ends (potentially truncated)	35.51 %
% of genes from short scaffolds (< 2000 bps)	76.09 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (28.261 % of family members)
Environment Ontology (ENVO)	Unclassified (51.449 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.06% β-sheet: 1.20% Coil/Unstructured: 33.73%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF03631	Virul_fac_BrkB	17.39
PF00072	Response_reg	10.14
PF02482	Ribosomal_S30AE	8.70
PF13493	DUF4118	6.52
PF01408	GFO_IDH_MocA	2.90
PF00881	Nitroreductase	2.17
PF08447	PAS_3	1.45
PF10116	Host_attach	1.45
PF00578	AhpC-TSA	1.45
PF02653	BPD_transp_2	0.72
PF13633	Obsolete Pfam Family	0.72
PF02735	Ku	0.72
PF11838	ERAP1_C	0.72
PF12680	SnoaL_2	0.72
PF00692	dUTPase	0.72
PF07681	DoxX	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	17.39
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	8.70
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	0.72
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.72
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.72
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.72
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	76.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	76.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	76.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	5.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10003615	All Organisms → cellular organisms → Bacteria → Proteobacteria	5312	Open in IMG/M
3300002558\|JGI25385J37094_10004171	All Organisms → cellular organisms → Bacteria → Proteobacteria	5017	Open in IMG/M
3300002558\|JGI25385J37094_10088827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	940	Open in IMG/M
3300002560\|JGI25383J37093_10022573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2110	Open in IMG/M
3300002562\|JGI25382J37095_10052650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1562	Open in IMG/M
3300002562\|JGI25382J37095_10088121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1127	Open in IMG/M
3300002908\|JGI25382J43887_10000965	All Organisms → cellular organisms → Bacteria	10961	Open in IMG/M
3300002908\|JGI25382J43887_10236108	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300002912\|JGI25386J43895_10132263	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	618	Open in IMG/M
3300004268\|Ga0066398_10123984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	624	Open in IMG/M
3300005166\|Ga0066674_10000591	All Organisms → cellular organisms → Bacteria	11526	Open in IMG/M
3300005174\|Ga0066680_10210294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1231	Open in IMG/M
3300005176\|Ga0066679_10464475	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	828	Open in IMG/M
3300005186\|Ga0066676_10176673	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1359	Open in IMG/M
3300005187\|Ga0066675_10029302	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300005332\|Ga0066388_100230759	All Organisms → cellular organisms → Bacteria	2484	Open in IMG/M
3300005332\|Ga0066388_100274714	All Organisms → cellular organisms → Bacteria	2327	Open in IMG/M
3300005332\|Ga0066388_100300131	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300005446\|Ga0066686_10062857	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2302	Open in IMG/M
3300005446\|Ga0066686_10213672	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005518\|Ga0070699_100520076	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1082	Open in IMG/M
3300005518\|Ga0070699_101965310	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	535	Open in IMG/M
3300005552\|Ga0066701_10323552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	956	Open in IMG/M
3300005598\|Ga0066706_10176925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1625	Open in IMG/M
3300005713\|Ga0066905_100096897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1991	Open in IMG/M
3300005713\|Ga0066905_100244063	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300005713\|Ga0066905_100260206	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1339	Open in IMG/M
3300005764\|Ga0066903_101037831	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1504	Open in IMG/M
3300006796\|Ga0066665_10240127	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300006797\|Ga0066659_11945736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	500	Open in IMG/M
3300006852\|Ga0075433_11680463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	547	Open in IMG/M
3300006854\|Ga0075425_100771914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1102	Open in IMG/M
3300006854\|Ga0075425_102017727	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	645	Open in IMG/M
3300006871\|Ga0075434_101045702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	830	Open in IMG/M
3300007076\|Ga0075435_100574447	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300007255\|Ga0099791_10000111	All Organisms → cellular organisms → Bacteria	26508	Open in IMG/M
3300007255\|Ga0099791_10001968	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	8240	Open in IMG/M
3300009012\|Ga0066710_100019844	All Organisms → cellular organisms → Bacteria → Proteobacteria	7383	Open in IMG/M
3300009038\|Ga0099829_10164372	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1780	Open in IMG/M
3300009088\|Ga0099830_11804173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	511	Open in IMG/M
3300009090\|Ga0099827_10027946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	4030	Open in IMG/M
3300010043\|Ga0126380_10927412	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300010046\|Ga0126384_10096312	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300010046\|Ga0126384_10097228	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300010046\|Ga0126384_11895573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	568	Open in IMG/M
3300010085\|Ga0127445_1062966	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300010102\|Ga0127453_1037235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	646	Open in IMG/M
3300010107\|Ga0127494_1093051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	604	Open in IMG/M
3300010119\|Ga0127452_1165112	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	630	Open in IMG/M
3300010130\|Ga0127493_1098724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	551	Open in IMG/M
3300010141\|Ga0127499_1060745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	852	Open in IMG/M
3300010141\|Ga0127499_1189325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	553	Open in IMG/M
3300010304\|Ga0134088_10481308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	610	Open in IMG/M
3300010336\|Ga0134071_10000414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	14135	Open in IMG/M
3300010336\|Ga0134071_10021398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2743	Open in IMG/M
3300010336\|Ga0134071_10027277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2469	Open in IMG/M
3300010336\|Ga0134071_10201196	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	982	Open in IMG/M
3300010336\|Ga0134071_10754899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	518	Open in IMG/M
3300010359\|Ga0126376_10459036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1167	Open in IMG/M
3300010362\|Ga0126377_11276575	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	806	Open in IMG/M
3300010398\|Ga0126383_11469109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	771	Open in IMG/M
3300012096\|Ga0137389_11535541	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	562	Open in IMG/M
3300012189\|Ga0137388_10252532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1605	Open in IMG/M
3300012198\|Ga0137364_10037772	All Organisms → cellular organisms → Bacteria	3137	Open in IMG/M
3300012202\|Ga0137363_10040245	All Organisms → cellular organisms → Bacteria	3290	Open in IMG/M
3300012206\|Ga0137380_10145411	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2162	Open in IMG/M
3300012206\|Ga0137380_10500193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1071	Open in IMG/M
3300012207\|Ga0137381_10182693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1814	Open in IMG/M
3300012207\|Ga0137381_10592531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	966	Open in IMG/M
3300012207\|Ga0137381_11106733	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	682	Open in IMG/M
3300012209\|Ga0137379_10542538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1070	Open in IMG/M
3300012210\|Ga0137378_10250237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1649	Open in IMG/M
3300012211\|Ga0137377_10075176	All Organisms → cellular organisms → Bacteria	3170	Open in IMG/M
3300012211\|Ga0137377_10080718	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3060	Open in IMG/M
3300012364\|Ga0134027_1022829	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	596	Open in IMG/M
3300012371\|Ga0134022_1000972	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300012379\|Ga0134058_1240847	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	748	Open in IMG/M
3300012385\|Ga0134023_1273186	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	552	Open in IMG/M
3300012386\|Ga0134046_1055950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1017	Open in IMG/M
3300012390\|Ga0134054_1160252	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	869	Open in IMG/M
3300012393\|Ga0134052_1078307	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	877	Open in IMG/M
3300012396\|Ga0134057_1292874	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	892	Open in IMG/M
3300012396\|Ga0134057_1355462	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	608	Open in IMG/M
3300012397\|Ga0134056_1096681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	861	Open in IMG/M
3300012406\|Ga0134053_1041341	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300012582\|Ga0137358_10175254	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1462	Open in IMG/M
3300012582\|Ga0137358_10421809	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	902	Open in IMG/M
3300012582\|Ga0137358_10637198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	714	Open in IMG/M
3300012918\|Ga0137396_10386343	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300012922\|Ga0137394_10477820	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1059	Open in IMG/M
3300012927\|Ga0137416_10490825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1056	Open in IMG/M
3300012929\|Ga0137404_11698142	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	586	Open in IMG/M
3300012929\|Ga0137404_12292101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300012930\|Ga0137407_10748141	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	922	Open in IMG/M
3300012944\|Ga0137410_10874560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	759	Open in IMG/M
3300012944\|Ga0137410_11455036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	597	Open in IMG/M
3300012948\|Ga0126375_10589687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	847	Open in IMG/M
3300014150\|Ga0134081_10075493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1035	Open in IMG/M
3300015241\|Ga0137418_10390428	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1138	Open in IMG/M
3300015264\|Ga0137403_11254605	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	587	Open in IMG/M
3300015356\|Ga0134073_10156117	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	726	Open in IMG/M
3300015358\|Ga0134089_10304293	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	663	Open in IMG/M
3300015358\|Ga0134089_10338197	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	632	Open in IMG/M
3300015358\|Ga0134089_10552532	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	510	Open in IMG/M
3300017656\|Ga0134112_10140629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	924	Open in IMG/M
3300017656\|Ga0134112_10171908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	840	Open in IMG/M
3300017659\|Ga0134083_10005739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3960	Open in IMG/M
3300017659\|Ga0134083_10301738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	680	Open in IMG/M
3300018431\|Ga0066655_10023204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2923	Open in IMG/M
3300018431\|Ga0066655_10028914	All Organisms → cellular organisms → Bacteria	2678	Open in IMG/M
3300018433\|Ga0066667_11509589	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	594	Open in IMG/M
3300019789\|Ga0137408_1021439	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1180	Open in IMG/M
3300019789\|Ga0137408_1110007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	776	Open in IMG/M
3300020170\|Ga0179594_10017700	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2115	Open in IMG/M
3300026277\|Ga0209350_1006938	All Organisms → cellular organisms → Bacteria	3840	Open in IMG/M
3300026297\|Ga0209237_1001925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	12307	Open in IMG/M
3300026297\|Ga0209237_1055386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1963	Open in IMG/M
3300026297\|Ga0209237_1179308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	740	Open in IMG/M
3300026325\|Ga0209152_10050362	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1461	Open in IMG/M
3300026325\|Ga0209152_10405886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	536	Open in IMG/M
3300026523\|Ga0209808_1321309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	502	Open in IMG/M
3300026524\|Ga0209690_1047729	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300026532\|Ga0209160_1001754	All Organisms → cellular organisms → Bacteria	18264	Open in IMG/M
3300026536\|Ga0209058_1105333	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1418	Open in IMG/M
3300026536\|Ga0209058_1170292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	980	Open in IMG/M
3300026537\|Ga0209157_1098586	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1393	Open in IMG/M
3300026548\|Ga0209161_10085817	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1935	Open in IMG/M
3300026550\|Ga0209474_10718707	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300027655\|Ga0209388_1001097	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	6172	Open in IMG/M
3300027655\|Ga0209388_1002606	All Organisms → cellular organisms → Bacteria → Proteobacteria	4401	Open in IMG/M
3300027846\|Ga0209180_10254182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1011	Open in IMG/M
3300027875\|Ga0209283_10483091	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300027882\|Ga0209590_10601125	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300031720\|Ga0307469_10388641	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300031820\|Ga0307473_10490377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	827	Open in IMG/M
3300032180\|Ga0307471_100760662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1135	Open in IMG/M
3300032180\|Ga0307471_103752985	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	537	Open in IMG/M
3300032205\|Ga0307472_100304747	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.38%
Plants	Host-Associated → Plants	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.13%
Loam	Environmental → Terrestrial → Soil → Loam	7.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	23.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100036155	3300002558	Grasslands Soil	MRIFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
JGI25385J37094_100041713	3300002558	Grasslands Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEAPR*
JGI25385J37094_100888272	3300002558	Grasslands Soil	LLLSTIDMRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
JGI25383J37093_100225732	3300002560	Grasslands Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEPPR*
JGI25382J37095_100526504	3300002562	Grasslands Soil	RKISSRRRSQLRNFPFGMPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
JGI25382J37095_100881212	3300002562	Grasslands Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRXEYASDPCGALQRLGFELE
JGI25382J43887_100009655	3300002908	Grasslands Soil	MRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
JGI25382J43887_102361081	3300002908	Grasslands Soil	MRIFRPEVESVLKTLGVLSLVALVLAPIAWGYEQRRQARAWQSVACAYRLRDLAQRAPIIRVDYVADP
JGI25386J43895_101322632	3300002912	Grasslands Soil	MRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLE
Ga0066398_101239841	3300004268	Tropical Forest Soil	VESILKALGAIALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVSQRAPMIRVDYAADPCGALHRLGLGLEPPPR*
Ga0066674_100005918	3300005166	Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0066680_102102941	3300005174	Soil	RSQLRNFPFGMPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0066679_104644752	3300005176	Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEAPR*
Ga0066676_101766731	3300005186	Soil	MRMFKPEIESALKTLALISLVALVLVPIAWGYEQRRQARAWQSVACAYRVREVARQAIIVRVDYAANPCAALERLGFAMEAPR*
Ga0066675_100293022	3300005187	Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0066388_1002307595	3300005332	Tropical Forest Soil	MRIFKPEVESILKALGAIALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYAADPCGALHRLGLGLEPPPR*
Ga0066388_1002747142	3300005332	Tropical Forest Soil	MRVLNPRVASFLKALGAISLIALVLTPIAWGYEQRRQARVWQSVACAYRVREVAQRTALVGVDYASDPCRALHRLGFELEAPR*
Ga0066388_1003001312	3300005332	Tropical Forest Soil	MRFFRPEVESVLKALAAMSLIALVLTPIAWGYEQRRQARAWQSMACAYRVREVTLHSPIVRVDATSDPCSALHRLGFVLEPPR*
Ga0066686_100628571	3300005446	Soil	MRMFKPEIESALKTLALISLVALVLVPIAWGYEQRRQARAWQSVACAYRVREVARQAIIVRVDYAANPCAALERLGFALEAPR*
Ga0066686_102136722	3300005446	Soil	MRIFRPEVESILKALAAIALIALVLAPFAWGYEQRRQARAWQSVACAYRVRELAQRAPIIRVDAAADPCGALHRLGLVLEPPR*
Ga0070699_1005200762	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0070699_1019653101	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFRPEVESILKALGAMSLVALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPIIRVDYAADPCGALHRLGLVLEPPR*
Ga0066701_103235522	3300005552	Soil	MPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0066706_101769252	3300005598	Soil	MRIFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLE
Ga0066905_1000968975	3300005713	Tropical Forest Soil	ESEMRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVARRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0066905_1002440633	3300005713	Tropical Forest Soil	MRIFKPEVESILKALGAIALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0066905_1002602063	3300005713	Tropical Forest Soil	LLFCTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0066903_1010378314	3300005764	Tropical Forest Soil	LLFCTIAMRVLNPRVASFLKALGAISLIALVLTPIAWGYEQRRQARVWQSVACAYRVREVAQRTALVRVDYASDPCRALQRLGFELEAPR*
Ga0066665_102401271	3300006796	Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGAL
Ga0066659_119457362	3300006797	Soil	RIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEAPR*
Ga0075433_116804631	3300006852	Populus Rhizosphere	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALYRLGLGLEPPPR*
Ga0075425_1007719142	3300006854	Populus Rhizosphere	LLLRTIDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQTAACTYRVREVALRTGIVRVEYASDPCGALQRLGFELEAPR*
Ga0075425_1020177271	3300006854	Populus Rhizosphere	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPC
Ga0075434_1010457021	3300006871	Populus Rhizosphere	MRIFTSEVQSVLKALGVLSLVALMLAPLSWGYEQRRQARAWQSVACAYRVRELTQRPSIVRVEYANDPCAVLQRLGLDLEPPR*
Ga0075435_1005744471	3300007076	Populus Rhizosphere	MRIFTSEVQSVLKALGVLSLVALMLAPLSWGYEQRRQARAWQSVACAYRVRELTQRPSIVRVEYANDPCAVLQRLGLDLEPPR
Ga0099791_1000011111	3300007255	Vadose Zone Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLRLEPPPR*
Ga0099791_100019689	3300007255	Vadose Zone Soil	LLLSTVDMRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASHPCGALQRLGFELEAPR*
Ga0066710_1000198442	3300009012	Grasslands Soil	MRMFKPEIESALKTLALISLVALVLVPIAWGYEQRRQARAWQSVACAYRVREVARQAIIVRVDYAANPCAALERLGFALEAPR
Ga0099829_101643722	3300009038	Vadose Zone Soil	LLFTTVAMRIFRPEVESVLKALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRARIVRVALEADPCGALHRLGFVIEPPR*
Ga0099830_118041731	3300009088	Vadose Zone Soil	MRIFRPEVESILRAVGAISLIALVLAPIAWGYEQRRQARAWQSVACAYRMREVAQRATIVRVDYAADPCGALERLGFALEPPR*
Ga0099827_100279463	3300009090	Vadose Zone Soil	MRIFRPEVESVLKALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRARIVRVALEADPCGALRRLGFVIEPPR*
Ga0126380_109274121	3300010043	Tropical Forest Soil	MRIFKPEVESILKALGAIALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVSQRAPMIRVDYAADPCGALHRLGLGLEPPPR*
Ga0126384_100963121	3300010046	Tropical Forest Soil	MRVLNPSVASFIKVLGAISLIALVVTPIAWGYEQRRQARAWQSMACAYRVREVAQRTALVRFDYASDPCRALQRLGFELEAPR*
Ga0126384_100972284	3300010046	Tropical Forest Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVARRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0126384_118955731	3300010046	Tropical Forest Soil	MRVLNPSVASFIKVLGAISLIALVLTPIAWGYEQRRQARAWQSVACAYRVREVAQRTALVRVDYASDPCGALQR
Ga0127445_10629661	3300010085	Grasslands Soil	PRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0127453_10372352	3300010102	Grasslands Soil	KPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0127494_10930511	3300010107	Grasslands Soil	LIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0127452_11651122	3300010119	Grasslands Soil	LNPRVASFIKVLGAISLIALVLTPIAWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0127493_10987242	3300010130	Grasslands Soil	MPLALSTIAMRMFKPEVESLIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0127499_10607451	3300010141	Grasslands Soil	EVESLIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0127499_11893252	3300010141	Grasslands Soil	PRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEAPR*
Ga0134088_104813082	3300010304	Grasslands Soil	MRIFRPEVESILKALGAIGLLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0134071_100004144	3300010336	Grasslands Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134071_100213982	3300010336	Grasslands Soil	MPLALRTIAMRIFKPEVESLIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0134071_100272772	3300010336	Grasslands Soil	MRIFRPEVESILKTLAAMALIALVLTPFAWGYEQRRQARAWQSVACAYRVRELAQRAPIIRVDAAADPCGALHRLGLVLEPPR*
Ga0134071_102011963	3300010336	Grasslands Soil	MRIFRPEVESILKALGAIALLALVLAPIARGYEQRRQARAWQSVACAYRVREVAQRAPLIRDDYATDPCGALHRLGLGLEPPPR*
Ga0134071_107548992	3300010336	Grasslands Soil	FGKSLLDREANSAISRSACGLLLSTVAMRILNPRVASFIKVLGAISLIALVVTPIAWGYEQRRQARAWQSVACAYRVREVAQRTALVRVDYASDPCGALQRLGFELPAPR*
Ga0126376_104590362	3300010359	Tropical Forest Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0126377_112765752	3300010362	Tropical Forest Soil	MRVLNPSVASFIKVLGAISLIALVLTPIAWGYEQRRQARAWQSMACAYRVREVAQRTALVRFDYASDPCRALQRLGFELEAPR*
Ga0126383_114691092	3300010398	Tropical Forest Soil	MRIFKPEVESILKALGAIALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPP
Ga0137389_115355412	3300012096	Vadose Zone Soil	MRIFRPEVESVLKALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRVREVARRAPIVRVALEADPCGALHRLGFVI
Ga0137388_102525322	3300012189	Vadose Zone Soil	MRIFRPEVESVLKALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRARIVRVALEADPCGALHRLGFVIEPPR*
Ga0137364_100377724	3300012198	Vadose Zone Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRVEYSSDPCGALQRLGFELEAPR*
Ga0137363_100402453	3300012202	Vadose Zone Soil	MRSFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLRLEPPPR*
Ga0137380_101454114	3300012206	Vadose Zone Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0137380_105001932	3300012206	Vadose Zone Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVARRAPMIRVDDATDPCGALHRLGLGLEPPPR*
Ga0137381_101826931	3300012207	Vadose Zone Soil	MRNFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0137381_105925312	3300012207	Vadose Zone Soil	MRIFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVARRAPMIRVDDATDPCGALHRLGLGLEPPPR*
Ga0137381_111067332	3300012207	Vadose Zone Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDDATDPCGALHRLGLGLEPPPR*
Ga0137379_105425382	3300012209	Vadose Zone Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVARRAPMIRVDDATDPCGALHRLGLRLEPPPR*
Ga0137378_102502373	3300012210	Vadose Zone Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWRAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0137377_100751763	3300012211	Vadose Zone Soil	MRIFRPEVESILKALRALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0137377_100807183	3300012211	Vadose Zone Soil	LLLSTIDMRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134027_10228292	3300012364	Grasslands Soil	IFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134022_10009722	3300012371	Grasslands Soil	ACCGTALFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134058_12408471	3300012379	Grasslands Soil	EPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134023_12731862	3300012385	Grasslands Soil	GQSRQKSRLVLRAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134046_10559503	3300012386	Grasslands Soil	VLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134054_11602523	3300012390	Grasslands Soil	FKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0134052_10783071	3300012393	Grasslands Soil	MFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0134057_12928741	3300012396	Grasslands Soil	FKPEVESLIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0134057_13554622	3300012396	Grasslands Soil	RIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134056_10966811	3300012397	Grasslands Soil	MGFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134053_10413414	3300012406	Grasslands Soil	SLIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0137358_101752544	3300012582	Vadose Zone Soil	LLLSTIDMRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVARRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0137358_104218091	3300012582	Vadose Zone Soil	MRIFRPEVESVLKTLGVLSLVALVLAPIAWGYEQRRQARAWQSVACAYRLRDLAQRAPIIRVDYVADPCGVLHWPRI
Ga0137358_106371982	3300012582	Vadose Zone Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEA
Ga0137396_103863432	3300012918	Vadose Zone Soil	MNWSTVTMRIFRPEVESILKALAAMALITLVLAPFAWGYEQRRQARAWQSVACAYRVRELAQRAPIIRVDSAADPCGALHRLGLVLEPPR*
Ga0137394_104778201	3300012922	Vadose Zone Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVRELAQRAPMIRVDYATDP
Ga0137416_104908252	3300012927	Vadose Zone Soil	MRIFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLRLEPPPR*
Ga0137404_116981422	3300012929	Vadose Zone Soil	CAALKTLGVLSLVALVLAPIAWGYEQRRQARAWQSVACAYRLRDLAQRAPIIRVDYVADAAASCGVLHRHGLVLEPAR*
Ga0137404_122921011	3300012929	Vadose Zone Soil	MITMRMFKPEIESALKTLALISLVALVLVPIAWGYEQRRQARAWQSVACAYRVREVARQAIIVRVDYAANPCAALERLGFALEAPR*
Ga0137407_107481412	3300012930	Vadose Zone Soil	MRIFEPRVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0137410_108745601	3300012944	Vadose Zone Soil	MFKPEIESALKTLALISLVALVLVPIAWGYEQRRQARAWQSVACAYRVREVARQAIIVRVDYAANPCAALERLGFALEAPR*
Ga0137410_114550361	3300012944	Vadose Zone Soil	LLLSTIDMRIFEPKVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0126375_105896873	3300012948	Tropical Forest Soil	ALGVMSLVALVLAPIAWGYEQRRQARAWQPVACAYRVREVAQRALLVYVDAAADPCGTLRRLGFELEPPR*
Ga0134081_100754932	3300014150	Grasslands Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0137418_103904281	3300015241	Vadose Zone Soil	MRIFEPRVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEA
Ga0137403_112546052	3300015264	Vadose Zone Soil	ESVLKTLGVLSLVALVLAPIAWGYEQRRQARAWQSVACAYRLRDLAQRAPIIRVDYVADAAASCGVLHRHGLVLEPAR*
Ga0134073_101561171	3300015356	Grasslands Soil	RVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR*
Ga0134089_103042932	3300015358	Grasslands Soil	MRIFRPEVESILKTLAPMALIALVLTPFAWGYEQRRQARAWQSVACAYRVRELAQRAPIIRVDAAADPCGALHRLGL
Ga0134089_103381971	3300015358	Grasslands Soil	MPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVAGAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR*
Ga0134089_105525321	3300015358	Grasslands Soil	MRIFRPEVESILKALGAIALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR*
Ga0134112_101406292	3300017656	Grasslands Soil	MPLALRTIAMRIFKPEVESLIKALGAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR
Ga0134112_101719082	3300017656	Grasslands Soil	LGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR
Ga0134083_100057395	3300017659	Grasslands Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFEL
Ga0134083_103017381	3300017659	Grasslands Soil	MPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATNPCGDLQRLGFDLEPPR
Ga0066655_100232043	3300018431	Grasslands Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0066655_100289142	3300018431	Grasslands Soil	MRIFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR
Ga0066667_115095892	3300018433	Grasslands Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0137408_10214392	3300019789	Vadose Zone Soil	LLLSTIDMRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0137408_11100072	3300019789	Vadose Zone Soil	MRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0179594_100177004	3300020170	Vadose Zone Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0209350_10069385	3300026277	Grasslands Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEPPR
Ga0209237_100192516	3300026297	Grasslands Soil	MRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEAPR
Ga0209237_10553863	3300026297	Grasslands Soil	MRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR
Ga0209237_11793082	3300026297	Grasslands Soil	MRIFRPEVESILKALAAIALIALVLAPFAWGYEQRRQARAWQSVACAYRVRELAQRAPIIRVDAAADPCGALHRLGLVLEPPR
Ga0209152_100503622	3300026325	Soil	LLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQMAACTYRVREVALRTAIVRLEYASDPCGALQRLGFELEAPR
Ga0209152_104058862	3300026325	Soil	MRIFKPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPP
Ga0209808_13213092	3300026523	Soil	ASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0209690_10477293	3300026524	Soil	MRIFRPEVESILKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLKPPPR
Ga0209160_10017543	3300026532	Soil	MRIFRPEVESLLKALGALALLALVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR
Ga0209058_11053331	3300026536	Soil	RRSQLRNFPFGMPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR
Ga0209058_11702922	3300026536	Soil	MRMFKPEIESALKTLALISLVALVPVPIAWGYEQRRQARAWQSVACAYRVREVARQAIIVRVDYAANPCAALERLGFALEAPR
Ga0209157_10985862	3300026537	Soil	MPLALSTIAMRMFKPEVESLIKALVAISLIALVLVPISWGYEQRRQARAWQSVACAYRVREVAQRATMVRVDYATDPCGALQRLGFDLEPPR
Ga0209161_100858172	3300026548	Soil	MRIFEPRVASFIKVLAAISLVALVLPPIAWGYEQRRQARAWQACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0209474_107187072	3300026550	Soil	NSAISRSACGLLLSTVDMRIFEPRVASFIKVLAAISLVALVLTPIAWGYEQRRQARAWQAAACTYRVREVALRTAIVRVEYASDPCGALQRLGFELEAPR
Ga0209388_10010975	3300027655	Vadose Zone Soil	LLLSTIDMRIFEPKVASFIKVLAAISLVALVLTPLAWGYEQRRQARAWQTAACTYRVREVALRTAIVRVEYASHPCGALQRLGFELEAPR
Ga0209388_10026063	3300027655	Vadose Zone Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLRLEPPPR
Ga0209180_102541822	3300027846	Vadose Zone Soil	MRIFRPEVESVLKALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRVREVARRARIVRVALEADPCGALHRLGFVIEPPR
Ga0209283_104830913	3300027875	Vadose Zone Soil	EVESVLKALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRMREVAQRATIVRVDYAADPCGALERLGFALEPPR
Ga0209590_106011252	3300027882	Vadose Zone Soil	ALGVMSLVVLVLAPIAWGYEQRRQARAWQSVACAYRVREVAQRARIVRVALEADPCGALRRLGFVIEPPR
Ga0307469_103886412	3300031720	Hardwood Forest Soil	MRIFRPEVESILKALGALALLALILAPIAWGYEQRRQARAWQSVACAYRVREVAQRAPMIRVDYATDPCGALHRLGLGLEPPPR
Ga0307473_104903772	3300031820	Hardwood Forest Soil	LLSLAIAMRFFRPEVESVLKALAAMSLIALVLTPIAWGYEQRRQARAWQSMACAYRVREVTLHSPIVRVDATSDPCSALHRLGFVLEPPR
Ga0307471_1007606622	3300032180	Hardwood Forest Soil	MRFFRPEVESVLKALAAMSLIALVLTPIAWGYEQRRQARAWQSMACAYRVREVTLHSPIVRVDATSDPCSALHRLGFVLEPPR
Ga0307471_1037529851	3300032180	Hardwood Forest Soil	MRVFRPEVESILKALGAMSLVALVLAPIAWGYEQRRQARAWRSVACAYRVREVAQRAPIIRVDYAADPCGALHRLGLVLEPPR
Ga0307472_1003047472	3300032205	Hardwood Forest Soil	MRFFRPEVESVLKALAAMSLIALVLTPIAWGYEQRRQARAWQSMACAYRVREVTLHSPIVRVDATSDPCSALH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055596

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences