Metagenome Family F055593

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055593
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	52 residues
Representative Sequence	AVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Number of Associated Samples	115
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.17 %
% of genes near scaffold ends (potentially truncated)	95.65 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.826 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.290 % of family members)
Environment Ontology (ENVO)	Unclassified (31.884 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.33% β-sheet: 0.00% Coil/Unstructured: 82.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF11906	DUF3426	8.70
PF05685	Uma2	6.52
PF03061	4HBT	5.07
PF01451	LMWPc	3.62
PF00343	Phosphorylase	1.45
PF13460	NAD_binding_10	1.45
PF13561	adh_short_C2	1.45
PF01850	PIN	1.45
PF00171	Aldedh	1.45
PF00883	Peptidase_M17	0.72
PF00535	Glycos_transf_2	0.72
PF08241	Methyltransf_11	0.72
PF00106	adh_short	0.72
PF00873	ACR_tran	0.72
PF13426	PAS_9	0.72
PF00012	HSP70	0.72
PF00378	ECH_1	0.72
PF13517	FG-GAP_3	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	6.52
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.45
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	1.45
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.45
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.45
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	0.72
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.83 %
Unclassified	root	N/A	2.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.96 %
Unclassified	root	N/A	2.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	85.51 %
Unclassified	root	N/A	2.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	85.51 %
Unclassified	root	N/A	2.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	82.61 %
Unclassified	root	N/A	2.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	82.61 %
Unclassified	root	N/A	2.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101952158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101953107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	990	Open in IMG/M
3300000955\|JGI1027J12803_103817542	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300004643\|Ga0062591_101682427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	643	Open in IMG/M
3300004778\|Ga0062383_10363376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	706	Open in IMG/M
3300005166\|Ga0066674_10246588	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005171\|Ga0066677_10276292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	958	Open in IMG/M
3300005172\|Ga0066683_10000287	All Organisms → cellular organisms → Bacteria	14508	Open in IMG/M
3300005177\|Ga0066690_10561222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	764	Open in IMG/M
3300005180\|Ga0066685_10682767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300005187\|Ga0066675_10684836	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005332\|Ga0066388_103082734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	851	Open in IMG/M
3300005332\|Ga0066388_103883498	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	762	Open in IMG/M
3300005332\|Ga0066388_108318965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300005333\|Ga0070677_10510722	Not Available	653	Open in IMG/M
3300005335\|Ga0070666_11043899	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300005338\|Ga0068868_102113693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300005441\|Ga0070700_101427921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300005447\|Ga0066689_10836002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
3300005451\|Ga0066681_10962227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300005457\|Ga0070662_100898360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300005467\|Ga0070706_100047427	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300005467\|Ga0070706_100312805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1465	Open in IMG/M
3300005467\|Ga0070706_100935786	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005468\|Ga0070707_100755216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
3300005468\|Ga0070707_102286781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	508	Open in IMG/M
3300005545\|Ga0070695_101617003	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300005549\|Ga0070704_100872021	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300005553\|Ga0066695_10147925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1462	Open in IMG/M
3300005555\|Ga0066692_10687477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300005764\|Ga0066903_104299261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	761	Open in IMG/M
3300005764\|Ga0066903_105627427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300005764\|Ga0066903_106094492	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300006046\|Ga0066652_102072379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300006796\|Ga0066665_10786365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300006796\|Ga0066665_11538214	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	521	Open in IMG/M
3300006797\|Ga0066659_10316794	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1197	Open in IMG/M
3300006797\|Ga0066659_11109547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300006804\|Ga0079221_11381835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300006806\|Ga0079220_10521090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	819	Open in IMG/M
3300006852\|Ga0075433_11802091	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	526	Open in IMG/M
3300006854\|Ga0075425_100133082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2843	Open in IMG/M
3300006903\|Ga0075426_10748480	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	734	Open in IMG/M
3300006904\|Ga0075424_100489251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1313	Open in IMG/M
3300007255\|Ga0099791_10453081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300009012\|Ga0066710_100113236	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3671	Open in IMG/M
3300009038\|Ga0099829_11079976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300009087\|Ga0105107_10901535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300009089\|Ga0099828_10240898	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300009094\|Ga0111539_11458155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	794	Open in IMG/M
3300009101\|Ga0105247_11050507	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300009137\|Ga0066709_103936046	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300009137\|Ga0066709_104207419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300009792\|Ga0126374_10869207	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	696	Open in IMG/M
3300010043\|Ga0126380_10447071	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	976	Open in IMG/M
3300010046\|Ga0126384_11089389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300010046\|Ga0126384_12360323	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010304\|Ga0134088_10315466	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	756	Open in IMG/M
3300010304\|Ga0134088_10357748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	709	Open in IMG/M
3300010320\|Ga0134109_10373932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	564	Open in IMG/M
3300010325\|Ga0134064_10410069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300010333\|Ga0134080_10261476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	766	Open in IMG/M
3300010333\|Ga0134080_10557115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300010335\|Ga0134063_10327270	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300010359\|Ga0126376_11722809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300010361\|Ga0126378_13451435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300010362\|Ga0126377_11977940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300010362\|Ga0126377_12742169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300010397\|Ga0134124_10022246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5208	Open in IMG/M
3300010399\|Ga0134127_11738804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	699	Open in IMG/M
3300010400\|Ga0134122_10372076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1252	Open in IMG/M
3300010403\|Ga0134123_10411320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1244	Open in IMG/M
3300012096\|Ga0137389_10331287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1293	Open in IMG/M
3300012198\|Ga0137364_10566238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	855	Open in IMG/M
3300012904\|Ga0157282_10044237	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300012918\|Ga0137396_10860449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300012923\|Ga0137359_11203652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	646	Open in IMG/M
3300012930\|Ga0137407_10349006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1362	Open in IMG/M
3300012930\|Ga0137407_11313889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300012931\|Ga0153915_12914753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300012957\|Ga0164303_10419681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	832	Open in IMG/M
3300012971\|Ga0126369_11116141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300012972\|Ga0134077_10038115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1736	Open in IMG/M
3300014154\|Ga0134075_10552970	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	519	Open in IMG/M
3300014264\|Ga0075308_1129255	Not Available	565	Open in IMG/M
3300014326\|Ga0157380_11723825	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	684	Open in IMG/M
3300015374\|Ga0132255_105439780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300016357\|Ga0182032_11079658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	688	Open in IMG/M
3300017656\|Ga0134112_10401892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	566	Open in IMG/M
3300017657\|Ga0134074_1025151	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1976	Open in IMG/M
3300017657\|Ga0134074_1049647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1418	Open in IMG/M
3300017657\|Ga0134074_1339954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	552	Open in IMG/M
3300018058\|Ga0187766_10969997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	603	Open in IMG/M
3300018433\|Ga0066667_11868465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	546	Open in IMG/M
3300018482\|Ga0066669_11892575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300019360\|Ga0187894_10172652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1078	Open in IMG/M
3300019458\|Ga0187892_10490058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300022563\|Ga0212128_10676309	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	620	Open in IMG/M
3300025903\|Ga0207680_11080591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300025910\|Ga0207684_11020269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	691	Open in IMG/M
3300025910\|Ga0207684_11615406	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	524	Open in IMG/M
3300025915\|Ga0207693_10393366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1084	Open in IMG/M
3300025922\|Ga0207646_11395064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	609	Open in IMG/M
3300025922\|Ga0207646_11757677	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300025940\|Ga0207691_10959659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300026075\|Ga0207708_11740927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	547	Open in IMG/M
3300026088\|Ga0207641_11956160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300026298\|Ga0209236_1051143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2059	Open in IMG/M
3300026307\|Ga0209469_1020423	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300026307\|Ga0209469_1121747	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	636	Open in IMG/M
3300026314\|Ga0209268_1021409	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2353	Open in IMG/M
3300026326\|Ga0209801_1270124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300026328\|Ga0209802_1017860	All Organisms → cellular organisms → Bacteria	3970	Open in IMG/M
3300026335\|Ga0209804_1324705	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300026523\|Ga0209808_1262505	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	551	Open in IMG/M
3300026524\|Ga0209690_1093128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1247	Open in IMG/M
3300026528\|Ga0209378_1011542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5307	Open in IMG/M
3300026548\|Ga0209161_10327855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	704	Open in IMG/M
3300027748\|Ga0209689_1338522	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	576	Open in IMG/M
3300027846\|Ga0209180_10372922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	811	Open in IMG/M
3300027875\|Ga0209283_10383976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	917	Open in IMG/M
3300028379\|Ga0268266_10796581	Not Available	913	Open in IMG/M
3300031538\|Ga0310888_10898438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	553	Open in IMG/M
3300031544\|Ga0318534_10794341	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	532	Open in IMG/M
3300031720\|Ga0307469_10771714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	879	Open in IMG/M
3300031720\|Ga0307469_12523445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300031740\|Ga0307468_101560358	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300031835\|Ga0318517_10296326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	731	Open in IMG/M
3300031880\|Ga0318544_10321832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	601	Open in IMG/M
3300032076\|Ga0306924_10881866	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	991	Open in IMG/M
3300032180\|Ga0307471_101484220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	836	Open in IMG/M
3300032180\|Ga0307471_102653821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	635	Open in IMG/M
3300032205\|Ga0307472_102342832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300032893\|Ga0335069_10194094	All Organisms → cellular organisms → Bacteria	2479	Open in IMG/M
3300033004\|Ga0335084_10121549	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300033416\|Ga0316622_100283992	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300033487\|Ga0316630_11897469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300033513\|Ga0316628_100350130	All Organisms → cellular organisms → Bacteria → Proteobacteria	1859	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.41%
Host-Associated	Host-Associated	11.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.51%
Plants	Host-Associated → Plants	11.59%
Aquatic	Environmental → Aquatic	2.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.42%
Freshwater	Environmental → Aquatic → Freshwater	2.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Cave	Environmental → Terrestrial → Cave	1.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.77%
Loam	Environmental → Terrestrial → Soil → Loam	15.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.45%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.72%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014264	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1019521581	3300000364	Soil	GEYFYTAACGYHFVKDGXDYSXVXPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD*
INPhiseqgaiiFebDRAFT_1019531072	3300000364	Soil	VNDKTNRAALGGRYQXSFIERXWXPXYFSLRTLTRMTD*
JGI1027J12803_1038175421	3300000955	Soil	MCGYHFVKNDETFSAVFPNLVVGVNDKTNRAAIGGRYQSSFLEQNWDPSYFSLRTLTHMTD*
Ga0062591_1016824271	3300004643	Soil	NRGGEYFYTAMCAYHFVKNDETYHAVFPNFVVGVNDKTNRAALGGRYQESFIERKWDPAYFSLRTLTRMTD*
Ga0062383_103633762	3300004778	Wetland Sediment	EYFYTAMCGYHFVKNDENYHAVFPSLVLGVNDKTNRAALGGRYQESFIERKWDPGYFSLRTLTRMTD*
Ga0066674_102465883	3300005166	Soil	DETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066677_102762923	3300005171	Soil	AGEYFYTAACGYHFVKNDETFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0066683_100002871	3300005172	Soil	VFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066690_105612223	3300005177	Soil	AVFPSLVIGVNDKINRAAIGGRYQSSFIERSWDASYFSLRTLTHMSD*
Ga0066685_106827672	3300005180	Soil	HFVKNDETFSAVFPNLVIGVNDKINRAALGGRYQSSFIERNWDPGYFSLRTLTHMSD*
Ga0066675_106848363	3300005187	Soil	FPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066388_1030827343	3300005332	Tropical Forest Soil	FVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD*
Ga0066388_1038834983	3300005332	Tropical Forest Soil	PNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD*
Ga0066388_1083189652	3300005332	Tropical Forest Soil	KNDDTFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQNWDPSYFSLRTLTHMTD*
Ga0070677_105107221	3300005333	Miscanthus Rhizosphere	GVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD*
Ga0070666_110438992	3300005335	Switchgrass Rhizosphere	GEYFYTAMCAYHFVKNDETYHAVFPNFVVGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD*
Ga0068868_1021136931	3300005338	Miscanthus Rhizosphere	VFPNFVVGVNDKTNRAALGGRYQESFIERKWDPAYFSLRTLTRMTD*
Ga0070700_1014279211	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PSMVLGVNDKNNRAALGGRYQTSFIERNWDPKYFSIRTLTRMTD*
Ga0066689_108360021	3300005447	Soil	CGYHFVKNDETFSAVFPNLVIGVNDKTNRAALGGRFQSSFLEQHWDPAYFSLRTITHMTD
Ga0066681_109622272	3300005451	Soil	MCGYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRFQSSFLEQHWDPGYFSLRTITHMTD*
Ga0070662_1008983601	3300005457	Corn Rhizosphere	MCAYHFVKNDETYHAVFPNFVVGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD*
Ga0070706_1000474271	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GVNDKTNRAALGGRFQNSFLEQSWDPSYFSLRTLTHMSD*
Ga0070706_1003128051	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	NRAGEYFYTAACGYHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPNYFSLRTLTHMSD*
Ga0070706_1009357862	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	CGYHFVKNDETFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0070707_1007552161	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GVNDKINRAAIGGRYQSSFIERNWDPNYFSLRTLTHMSD*
Ga0070707_1022867812	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0070695_1016170031	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VAQNLVIGVNDKTNRAALGGRYDSQFLEQKWDPSYFSLRTLTHMTD*
Ga0070704_1008720211	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AMCAYHFVKNDETFHAIFPNFVVGVNDKTNRAALGGRYQESFIERKWDPGYFSLRTLTRMTD*
Ga0066695_101479253	3300005553	Soil	VIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0066692_106874772	3300005555	Soil	YHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066903_1042992611	3300005764	Tropical Forest Soil	YSTVSPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLKTLTHMTE*
Ga0066903_1056274271	3300005764	Tropical Forest Soil	VYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD*
Ga0066903_1060944921	3300005764	Tropical Forest Soil	VIGVNDKINRAALGGRYQSSFVERNWDPGYFSLRTLTHMSD*
Ga0066652_1020723791	3300006046	Soil	VNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066665_107863653	3300006796	Soil	KNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066665_115382141	3300006796	Soil	AVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0066659_103167941	3300006797	Soil	INRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0066659_111095473	3300006797	Soil	VGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0079221_113818352	3300006804	Agricultural Soil	VNDKTNRAALGGRFQSSFIEQNWDPSYFSLRTLTHMTD*
Ga0079220_105210903	3300006806	Agricultural Soil	AGEYFYTAMCGYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRFQSSFLEQNWDPSYFSLRTLTHMTD*
Ga0075433_118020911	3300006852	Populus Rhizosphere	LVVGVNDKTNRAALGGRYQSSFLEQNWDPSYFSLRTLTHMTD*
Ga0075425_1001330821	3300006854	Populus Rhizosphere	FYTAMCGYHFVKNDDTFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQNWDPSYFSLRTLTHMTD*
Ga0075426_107484801	3300006903	Populus Rhizosphere	CGYHFVKNDETFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPNYFSLRTLTHMSD
Ga0075424_1004892511	3300006904	Populus Rhizosphere	GVNDKTNRAALGGRFQSSFLEQHWDPSYFSLRTITHMTD*
Ga0099791_104530812	3300007255	Vadose Zone Soil	VNDKTNRAALGGRFQSSFLEQHWDPGYFSLRTITHMTD*
Ga0066710_1001132361	3300009012	Grasslands Soil	NLVVGVNDKTNRAALGGRFQSSFLEQHWDPGYFSLRTITHMTD
Ga0099829_110799761	3300009038	Vadose Zone Soil	TFSAVFPNLVVGVNDKTNRAALGGRFQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0105107_109015351	3300009087	Freshwater Sediment	PNLVIGVNDKTNRAALGGRYQSSFVERKWDPGYFSLRTLTRLTD*
Ga0099828_102408981	3300009089	Vadose Zone Soil	GEYFYTAMCGYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0111539_114581553	3300009094	Populus Rhizosphere	GYHFVKNDEKYSAVFPNLVVGVNDKTNRAALGGRYQSSFIEQNWDPTYFTLRTITHMTD*
Ga0105247_110505071	3300009101	Switchgrass Rhizosphere	GVNDKTNRAALGGRYSSQFFESQWPEDYFSLRTLTHLSD*
Ga0066709_1039360461	3300009137	Grasslands Soil	TFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0066709_1042074191	3300009137	Grasslands Soil	ETFSAVFPNLVVGVNDKTNRAALGGRFQNSFLEQSWDPSYFSLRTLSHMTD*
Ga0126374_108692071	3300009792	Tropical Forest Soil	CGYHFVKDGENYSSVYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD
Ga0126380_104470713	3300010043	Tropical Forest Soil	YPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD*
Ga0126384_110893891	3300010046	Tropical Forest Soil	GENYSSVYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD*
Ga0126384_123603231	3300010046	Tropical Forest Soil	GTFSAVAPNLVVGVNDKTNRAALGGRYSAQFFEFKWPDDYFTLRTLTHLSD*
Ga0134088_103154661	3300010304	Grasslands Soil	DKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0134088_103577481	3300010304	Grasslands Soil	LVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0134109_103739322	3300010320	Grasslands Soil	VKNDETFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0134064_104100692	3300010325	Grasslands Soil	VVGVNDKTNRAALVGRFQSSFLEQHWDPGYFSLRTITHMTD*
Ga0134080_102614763	3300010333	Grasslands Soil	GYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0134080_105571152	3300010333	Grasslands Soil	FSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0134063_103272703	3300010335	Grasslands Soil	CGYHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0126376_117228091	3300010359	Tropical Forest Soil	FVKNDETWHSVYPNLVIGVNDKINRAVLGGHDQSSFVERNLDPGYFSLRTLTHMSD*
Ga0126378_134514352	3300010361	Tropical Forest Soil	PNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD*
Ga0126377_119779403	3300010362	Tropical Forest Soil	FPNLVVGVNDKTNRAALGGRFQSSFIEQNWDPSYFSLRTLTHMTD*
Ga0126377_127421691	3300010362	Tropical Forest Soil	VYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD*
Ga0134124_100222461	3300010397	Terrestrial Soil	VNDKTNRAALGGRYQESFVERKWDPAYFSLRTLTRMTD*
Ga0134127_117388041	3300010399	Terrestrial Soil	RAGEYFYTAMCAYHFVKNDETYHAVFPNFVVGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD*
Ga0134122_103720763	3300010400	Terrestrial Soil	VVGVNDKTNRAALGGRFTSSFLEQKWDPSYFSLRTLTHMTD*
Ga0134123_104113204	3300010403	Terrestrial Soil	PNLVAGVNDKTNRAALGGRYQSSFIEQNWDPPYFTLRTITHMTD*
Ga0137389_103312874	3300012096	Vadose Zone Soil	VKNDETFSAVFPNLVVGVNDKTNRAALGGRFQNSFLEQSWDPSYFSLRTLTHMSD*
Ga0137364_105662383	3300012198	Vadose Zone Soil	EYFYTAACGYHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD*
Ga0157282_100442371	3300012904	Soil	FSAVAPNLVVGVNDKTNRAALGGRYSSQFFESQWPEDYFSLRTLTHLSD*
Ga0137396_108604493	3300012918	Vadose Zone Soil	NLVVGVNDKTNRSALGGRYQSSFLEQNWDPAYFTLRTLTHMTD*
Ga0137359_112036523	3300012923	Vadose Zone Soil	LVVGVNDKTNRAAIGGRFQSSFLEQTWDPSYFSLRTLTHMTD*
Ga0137407_103490061	3300012930	Vadose Zone Soil	NDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0137407_113138892	3300012930	Vadose Zone Soil	EYFYTAMCGYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRFQSSFLEQHWDPGYFSLRTITHMTD*
Ga0153915_129147531	3300012931	Freshwater Wetlands	GEYFYTAMCGYHFAKNDADTYSAVFQSLVVGVNDKINRAAIGGRYGNAFLEQRWDPSHFSLRTITHMTD*
Ga0164303_104196813	3300012957	Soil	AGEYFYTAMCGYHFVKNDETFSAVFPNLVVGVNDRTNRAAPGGRYQSSFLEQSWDPSYVSLRTLTHMTD*
Ga0126369_111161411	3300012971	Tropical Forest Soil	ACGYHFVKDGEDFSTVSPNFVIGVNDKTNRAALGGRYQSSFVERNWDPNYFSLKTLTHMTE*
Ga0134077_100381154	3300012972	Grasslands Soil	AVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD*
Ga0134075_105529701	3300014154	Grasslands Soil	NRGGEYFYTAMCGYHFVKNDETFSAVFPNLVIGVNDKTNRAALGGRFQSSFLEQHWDPAYFSLRTITHMTD*
Ga0075308_11292551	3300014264	Natural And Restored Wetlands	WSKNGAGTFTAVTPNLVMGVNDKSNRAGLGGRFLSQFIERNFDPQYFSLRTLTRLTD*
Ga0157380_117238252	3300014326	Switchgrass Rhizosphere	YFYTAMCAYHFVKNDETFHAVFPNFVVGVNDKTNRAALGGRYQESFIERKWDPAYFSLRTLTRMTD*
Ga0132255_1054397802	3300015374	Arabidopsis Rhizosphere	CGYHFVQGDDYSAVYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD*
Ga0182032_110796583	3300016357	Soil	ETYSSVYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD
Ga0134112_104018922	3300017656	Grasslands Soil	AVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0134074_10251514	3300017657	Grasslands Soil	ETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0134074_10496471	3300017657	Grasslands Soil	NLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0134074_13399542	3300017657	Grasslands Soil	GVNDKTNRAALGGRFQSSFLEQHWDPGYFSLRTITHMTD
Ga0187766_109699971	3300018058	Tropical Peatland	VNDKTNRSALGGRYQSSFLEQHWDPSYFSLRTIAHMTD
Ga0066667_118684651	3300018433	Grasslands Soil	VGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0066669_118925752	3300018482	Grasslands Soil	YHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0187894_101726523	3300019360	Microbial Mat On Rocks	VNDKTNRAALGGRYQSSFIERKWDPAYFSLRTITRMTD
Ga0187892_104900582	3300019458	Bio-Ooze	NDKTNRAALGGRYQTSFVERKWDTSYFSLRTITRLTD
Ga0212128_106763091	3300022563	Thermal Springs	ACGYHFVKNDESFSASFPSMVIGVNDKSNRAALGGRYQTSFIERNWDPKYFSIRTLTRMT
Ga0207680_110805912	3300025903	Switchgrass Rhizosphere	HFVKNDETYHAVFPNFVVGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD
Ga0207684_110202691	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FYTAACGYHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPNYFSLRTLTHMSD
Ga0207684_116154062	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	KNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0207693_103933661	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLKTLTHMTD
Ga0207646_113950642	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVIGVNDKINRAALGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0207646_117576771	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FSAVFASLVISVNDKINRAAIGGRYQSSFIERNWDPNYFSLRTLTHMSD
Ga0207691_109596593	3300025940	Miscanthus Rhizosphere	NFVVGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD
Ga0207708_117409271	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD
Ga0207641_119561602	3300026088	Switchgrass Rhizosphere	EYFYTAMCAYHFVKNDETYHAVFPNFVVGVNDKTNRAALGGRYQESFIEHKWDPAYFSLRTLTRMTD
Ga0209236_10511431	3300026298	Grasslands Soil	VNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209469_10204231	3300026307	Soil	AMCGYHFVKYDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209469_11217471	3300026307	Soil	FPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209268_10214095	3300026314	Soil	GVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209801_12701241	3300026326	Soil	NDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209802_10178608	3300026328	Soil	SAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209804_13247052	3300026335	Soil	HFVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209808_12625052	3300026523	Soil	AGEYFYTAACGYHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0209690_10931281	3300026524	Soil	LVVGVNDKTNRAALGGRFQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209378_10115421	3300026528	Soil	YHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0209161_103278553	3300026548	Soil	GYHFVKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0209689_13385222	3300027748	Soil	VKNDDTFSAVFPSLVIGVNDKINRAAIGGRYQSSFIERNWDPSYFSLRTLTHMSD
Ga0209180_103729223	3300027846	Vadose Zone Soil	YFYTAMCGYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRFQNSFLEQSWDPSYFSLRTLTHMSD
Ga0209283_103839761	3300027875	Vadose Zone Soil	YFYTAMCGYHFVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQSSFLEQSWDPSYFSLRTLTHMTD
Ga0268266_107965812	3300028379	Switchgrass Rhizosphere	HFVKNQDETYSAVFPNLVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTRMTD
Ga0310888_108984382	3300031538	Soil	KNNRAALGGRYQTSFIERNWDPKYFSIRTLTRMTD
Ga0318534_107943411	3300031544	Soil	ENDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD
Ga0307469_107717143	3300031720	Hardwood Forest Soil	AMCGYHFVKNDETYHSVSPDLVVGVNDKSNRAALGGRYQESFIEKKWDPSYFSLRTLTRMTD
Ga0307469_125234452	3300031720	Hardwood Forest Soil	ETFSAVFPNLVVGVNDKTNRAALGGRFQSSFLEQSWDPSYFSLRTLTHMTD
Ga0307468_1015603581	3300031740	Hardwood Forest Soil	DLVIGVNDKTNRAALGGRYDSQYLEQKWDPSHFSLRTLSHLTD
Ga0318517_102963263	3300031835	Soil	NDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMTD
Ga0318544_103218322	3300031880	Soil	ACGYHFVKDGDTYSAVYPNFVIGVNDKTNRAALGGRYQSSFIERNWDPNYFSLRTLTHMT
Ga0306924_108818661	3300032076	Soil	TVSASFPSMVLGTNDKINRAALGGRYQSSFIERNWDQSYFSLRTISHMTD
Ga0307471_1014842201	3300032180	Hardwood Forest Soil	FVKNDETFSAVFPNLVVGVNDKTNRAALGGRYQNSFLEQSWDPSYFSLRTLTHMTD
Ga0307471_1026538212	3300032180	Hardwood Forest Soil	ETFSAVFPNLVVGVNDKTNRAALGGRFQNSFLEQHWDPAYFSLRTIAHMTD
Ga0307472_1023428321	3300032205	Hardwood Forest Soil	YTAMCGYHFVKNDETYHAVFPNLVVGVNDKTNRAALGGRYQESFIEKNWDPSYFSLRTLTRMTD
Ga0335069_101940944	3300032893	Soil	PSMVLGTNDKINRAALGGRYQSSFIERNWDQTYFSLRTISHMTD
Ga0335084_101215491	3300033004	Soil	LGTNDKINRSALGGRYQSSFIERNWDQTYFSLRTISHMTD
Ga0316622_1002839924	3300033416	Soil	VPEPEPFGVNDATSRAVLGSRYQSSFIERNRDPNWFSLRMLTRMTD
Ga0316630_118974691	3300033487	Soil	YFYNAMCAYHWSKNADGTLTAVTPNMVVGVNDKTNRAALGGRYQTSFIERNWDPKYFSIRTLTRMTD
Ga0316628_1003501301	3300033513	Soil	AGEYFYTAMCGYHFVKNDETYHSVFPSMVVGVNDKTNRAALGGRYQESFIERKWDPGYFSLRTLTRMTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055593

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences