Metagenome Family F055519

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F055519
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	49 residues
Representative Sequence	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPSAVVPRVVARTKASPKGR
Number of Associated Samples	96
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.54 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	78.99 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (90.580 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (18.841 % of family members)
Environment Ontology (ENVO)	Unclassified (37.681 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.957 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF03547	Mem_trans	21.74
PF00571	CBS	10.87
PF00856	SET	5.07
PF00271	Helicase_C	2.90
PF16980	CitMHS_2	2.90
PF00756	Esterase	2.17
PF00291	PALP	2.17
PF07152	YaeQ	1.45
PF12688	TPR_5	1.45
PF03976	PPK2	1.45
PF04228	Zn_peptidase	1.45
PF00753	Lactamase_B	1.45
PF03928	HbpS-like	1.45
PF00578	AhpC-TSA	0.72
PF01738	DLH	0.72
PF00528	BPD_transp_1	0.72
PF03600	CitMHS	0.72
PF00437	T2SSE	0.72
PF01625	PMSR	0.72
PF00202	Aminotran_3	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0679	Predicted permease, AEC (auxin efflux carrier) family	General function prediction only [R]	21.74
COG2321	Predicted metalloprotease	General function prediction only [R]	1.45
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.45
COG4681	Uncharacterized conserved protein YaeQ, suppresses RfaH defect	Function unknown [S]	1.45
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.58 %
Unclassified	root	N/A	9.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.58 %
Unclassified	root	N/A	9.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.58 %
Unclassified	root	N/A	9.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.71 %
Unclassified	root	N/A	9.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.45 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	46.38 %
Unclassified	root	N/A	9.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.25 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	36.96 %
Unclassified	root	N/A	9.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.25 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	36.96 %
Unclassified	root	N/A	9.42 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	6.52 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.45 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Aromatoleum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum	36.23 %
Unclassified	root	N/A	9.42 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	6.52 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.45 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Aromatoleum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum	36.23 %
Unclassified	root	N/A	9.42 %
unclassified Rhodoblastus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus	6.52 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.45 %
unclassified Chitinophagales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → unclassified Chitinophagales	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	36.23 %
Unclassified	root	N/A	9.42 %
Rhodoblastus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	6.52 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	1.45 %
Chitinophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → unclassified Chitinophagales → Chitinophagales bacterium	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	36.23 %
Unclassified	root	N/A	9.42 %
Rhodoblastus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	6.52 %
Actinomadura sp. KC06	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. KC06	1.45 %
Chitinophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → unclassified Chitinophagales → Chitinophagales bacterium	0.72 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_108279864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	622	Open in IMG/M
3300004025\|Ga0055433_10114919	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300004048\|Ga0055494_10025513	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300004156\|Ga0062589_100301187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300004463\|Ga0063356_101692355	All Organisms → cellular organisms → Bacteria → Proteobacteria	945	Open in IMG/M
3300004479\|Ga0062595_100314375	All Organisms → cellular organisms → Bacteria → Proteobacteria	1065	Open in IMG/M
3300004479\|Ga0062595_102574762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	509	Open in IMG/M
3300004778\|Ga0062383_10060982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	1516	Open in IMG/M
3300004778\|Ga0062383_10500437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	609	Open in IMG/M
3300004779\|Ga0062380_10152031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	905	Open in IMG/M
3300005168\|Ga0066809_10136193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	628	Open in IMG/M
3300005328\|Ga0070676_10187613	All Organisms → cellular organisms → Bacteria → Proteobacteria	1348	Open in IMG/M
3300005328\|Ga0070676_10388327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	968	Open in IMG/M
3300005331\|Ga0070670_100002419	All Organisms → cellular organisms → Bacteria → Proteobacteria	15382	Open in IMG/M
3300005331\|Ga0070670_100126630	All Organisms → cellular organisms → Bacteria → Proteobacteria	2205	Open in IMG/M
3300005331\|Ga0070670_100732487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	890	Open in IMG/M
3300005332\|Ga0066388_101848370	Not Available	1076	Open in IMG/M
3300005332\|Ga0066388_102623119	Not Available	918	Open in IMG/M
3300005333\|Ga0070677_10156861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300005353\|Ga0070669_100392020	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300005353\|Ga0070669_101071026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	693	Open in IMG/M
3300005353\|Ga0070669_101898307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	520	Open in IMG/M
3300005354\|Ga0070675_100058131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3189	Open in IMG/M
3300005364\|Ga0070673_101344478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. KC06	671	Open in IMG/M
3300005367\|Ga0070667_100047013	Not Available	3631	Open in IMG/M
3300005367\|Ga0070667_100391893	All Organisms → cellular organisms → Bacteria → Proteobacteria	1263	Open in IMG/M
3300005445\|Ga0070708_100130101	Not Available	2329	Open in IMG/M
3300005459\|Ga0068867_101621476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	605	Open in IMG/M
3300005544\|Ga0070686_100173939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1525	Open in IMG/M
3300005548\|Ga0070665_100468608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300005829\|Ga0074479_10379828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	545	Open in IMG/M
3300005841\|Ga0068863_100112523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	2592	Open in IMG/M
3300005843\|Ga0068860_100198236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1945	Open in IMG/M
3300005844\|Ga0068862_100293583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300005956\|Ga0073920_1029115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	697	Open in IMG/M
3300006844\|Ga0075428_100806579	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300006881\|Ga0068865_100245603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1410	Open in IMG/M
3300009075\|Ga0105090_10025156	All Organisms → cellular organisms → Bacteria → Proteobacteria	3684	Open in IMG/M
3300009091\|Ga0102851_11858038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	680	Open in IMG/M
3300009131\|Ga0115027_11417151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	566	Open in IMG/M
3300009176\|Ga0105242_10063132	All Organisms → cellular organisms → Bacteria → Proteobacteria	3050	Open in IMG/M
3300009177\|Ga0105248_11190883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. KC06	861	Open in IMG/M
3300009610\|Ga0105340_1201189	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300010358\|Ga0126370_11572783	Not Available	628	Open in IMG/M
3300014312\|Ga0075345_1186090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	518	Open in IMG/M
3300014316\|Ga0075339_1240023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	521	Open in IMG/M
3300014325\|Ga0163163_10443166	All Organisms → cellular organisms → Bacteria → Proteobacteria	1358	Open in IMG/M
3300015195\|Ga0167658_1099228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	624	Open in IMG/M
3300015258\|Ga0180093_1147018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	597	Open in IMG/M
3300015371\|Ga0132258_12203455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1383	Open in IMG/M
3300015371\|Ga0132258_12232187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1374	Open in IMG/M
3300015371\|Ga0132258_13421570	All Organisms → cellular organisms → Bacteria → Proteobacteria	1089	Open in IMG/M
3300015372\|Ga0132256_100510420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1313	Open in IMG/M
3300015374\|Ga0132255_101362913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300017792\|Ga0163161_12055325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	508	Open in IMG/M
3300018060\|Ga0187765_10446123	Not Available	808	Open in IMG/M
3300018083\|Ga0184628_10056717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1982	Open in IMG/M
3300018476\|Ga0190274_13184643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	552	Open in IMG/M
3300025315\|Ga0207697_10031687	All Organisms → cellular organisms → Bacteria → Proteobacteria	2162	Open in IMG/M
3300025893\|Ga0207682_10108166	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300025903\|Ga0207680_10302245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1116	Open in IMG/M
3300025908\|Ga0207643_10011476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4785	Open in IMG/M
3300025908\|Ga0207643_10849590	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300025925\|Ga0207650_10002086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13981	Open in IMG/M
3300025925\|Ga0207650_10008787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	6904	Open in IMG/M
3300025925\|Ga0207650_10060704	All Organisms → cellular organisms → Bacteria	2821	Open in IMG/M
3300025926\|Ga0207659_11160793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	664	Open in IMG/M
3300025930\|Ga0207701_10190093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300025934\|Ga0207686_10613195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	858	Open in IMG/M
3300025941\|Ga0207711_10067450	Not Available	3097	Open in IMG/M
3300025957\|Ga0210089_1006706	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300025960\|Ga0207651_11538065	Not Available	599	Open in IMG/M
3300026075\|Ga0207708_10325713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1255	Open in IMG/M
3300026118\|Ga0207675_100264619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1667	Open in IMG/M
3300027831\|Ga0209797_10023567	Not Available	2812	Open in IMG/M
3300027831\|Ga0209797_10062422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1649	Open in IMG/M
3300027840\|Ga0209683_10003798	All Organisms → cellular organisms → Bacteria	5799	Open in IMG/M
3300027897\|Ga0209254_10132315	All Organisms → cellular organisms → Bacteria	2060	Open in IMG/M
3300027897\|Ga0209254_10158420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1847	Open in IMG/M
3300027899\|Ga0209668_10067030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1991	Open in IMG/M
3300027900\|Ga0209253_10005452	All Organisms → cellular organisms → Bacteria → Proteobacteria	11033	Open in IMG/M
3300027900\|Ga0209253_10033499	All Organisms → cellular organisms → Bacteria	4300	Open in IMG/M
3300027902\|Ga0209048_10000240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	60246	Open in IMG/M
3300027902\|Ga0209048_10016329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6520	Open in IMG/M
3300028380\|Ga0268265_10476355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1171	Open in IMG/M
3300028380\|Ga0268265_10854991	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300028380\|Ga0268265_12323750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	543	Open in IMG/M
3300028802\|Ga0307503_10567120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	622	Open in IMG/M
3300031543\|Ga0318516_10507649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	692	Open in IMG/M
3300031720\|Ga0307469_10383284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1193	Open in IMG/M
3300031720\|Ga0307469_10962126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300031726\|Ga0302321_102006771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	672	Open in IMG/M
3300031740\|Ga0307468_100453634	All Organisms → cellular organisms → Bacteria → Proteobacteria	999	Open in IMG/M
3300031740\|Ga0307468_100789783	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300031740\|Ga0307468_102172947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	536	Open in IMG/M
3300031747\|Ga0318502_10818042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	565	Open in IMG/M
3300031820\|Ga0307473_10070264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1753	Open in IMG/M
3300031831\|Ga0318564_10428399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	578	Open in IMG/M
3300031834\|Ga0315290_10102763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	2412	Open in IMG/M
3300031834\|Ga0315290_10232549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1606	Open in IMG/M
3300031834\|Ga0315290_10535405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1021	Open in IMG/M
3300031834\|Ga0315290_11143093	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300031834\|Ga0315290_11219181	Not Available	624	Open in IMG/M
3300031834\|Ga0315290_11270426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	608	Open in IMG/M
3300031873\|Ga0315297_10639692	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300031879\|Ga0306919_11135360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	595	Open in IMG/M
3300031902\|Ga0302322_100917807	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031910\|Ga0306923_10866302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	992	Open in IMG/M
3300031910\|Ga0306923_11735429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	644	Open in IMG/M
3300031918\|Ga0311367_11358405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	701	Open in IMG/M
3300031959\|Ga0318530_10464552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	525	Open in IMG/M
3300031997\|Ga0315278_10032439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5035	Open in IMG/M
3300031997\|Ga0315278_10098258	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300032009\|Ga0318563_10132473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	1332	Open in IMG/M
3300032118\|Ga0315277_10062577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4284	Open in IMG/M
3300032118\|Ga0315277_10640755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300032143\|Ga0315292_11731693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	501	Open in IMG/M
3300032156\|Ga0315295_11171298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	755	Open in IMG/M
3300032164\|Ga0315283_10003442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13499	Open in IMG/M
3300032164\|Ga0315283_10760247	All Organisms → cellular organisms → Bacteria → Proteobacteria	1040	Open in IMG/M
3300032164\|Ga0315283_11219892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	784	Open in IMG/M
3300032164\|Ga0315283_11871135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	601	Open in IMG/M
3300032256\|Ga0315271_10018197	All Organisms → cellular organisms → Bacteria → Proteobacteria	4756	Open in IMG/M
3300032256\|Ga0315271_10062038	All Organisms → cellular organisms → Bacteria → Proteobacteria	2739	Open in IMG/M
3300032256\|Ga0315271_10147495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1841	Open in IMG/M
3300032256\|Ga0315271_10673891	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → unclassified Chitinophagales → Chitinophagales bacterium	887	Open in IMG/M
3300032256\|Ga0315271_11042725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	706	Open in IMG/M
3300032256\|Ga0315271_11522453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	576	Open in IMG/M
3300032342\|Ga0315286_11354538	Not Available	688	Open in IMG/M
3300032397\|Ga0315287_12099675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	619	Open in IMG/M
3300032397\|Ga0315287_12814321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	514	Open in IMG/M
3300032782\|Ga0335082_10535307	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1033	Open in IMG/M
3300032828\|Ga0335080_10738438	Not Available	1023	Open in IMG/M
3300033004\|Ga0335084_10040706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4778	Open in IMG/M
3300033004\|Ga0335084_11244780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	742	Open in IMG/M
3300033419\|Ga0316601_100296765	Not Available	1477	Open in IMG/M
3300033419\|Ga0316601_101235709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	750	Open in IMG/M
3300033487\|Ga0316630_10802375	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.67%
Host-Associated	Host-Associated	33.33%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	36.23%
Plants	Host-Associated → Plants	33.33%
Terrestrial	Environmental → Terrestrial	30.43%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	30.43%
Soil	Environmental → Terrestrial → Soil	28.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.04%
Marine	Environmental → Aquatic → Marine	2.90%
Sediment	Environmental → Aquatic → Sediment	2.90%
Peat	Environmental → Terrestrial → Peat	2.17%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	18.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.25%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.07%
Loam	Environmental → Terrestrial → Soil → Loam	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	18.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.25%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.07%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	18.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.87%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	5.07%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.07%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.90%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.17%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005956	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_23-Sept-14	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300014312	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1	Environmental	Open in IMG/M
3300014316	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025957	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1082798641	3300001213	Wetland	ADEGETTMAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR*
Ga0055433_101149191	3300004025	Natural And Restored Wetlands	MAKGKGGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVIPRTKASA
Ga0055494_100255132	3300004048	Natural And Restored Wetlands	MAKGKSGSSYPNPKGHTGPKTQFPQARRPPAAVVPRVAARTKASPKGR*
Ga0062589_1003011873	3300004156	Soil	MAKAKGGSAGFPNPKGHTGPKMQFPQAKRPPSAVAPRVAPRTKASPKGR*
Ga0063356_1016923553	3300004463	Arabidopsis Thaliana Rhizosphere	MAKAKGGSAGFPNPKGHTGPKMQFPQAKRPPSAVAPRVAPR
Ga0062595_1003143751	3300004479	Soil	MAKTKGGSGGYPNPKGHTGPKTQSPQAKRPPSGFVPRVAPRTKASPKGR*
Ga0062595_1025747622	3300004479	Soil	MGAKRESRAGPETNMAKSKSGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR*
Ga0062383_100609822	3300004778	Wetland Sediment	MTKGKGGTPYPNPKGHTGPKTQFPQARRPPQAVVPRVVARTKASPKGR*
Ga0062383_105004372	3300004778	Wetland Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR*
Ga0062380_101520312	3300004779	Wetland Sediment	MAKAKGGGSYPNPKGHTGPKTQFPQARRPPATTVPRVMPRTKASAKGR*
Ga0066809_101361932	3300005168	Soil	MTKGKGGGGGYPNPKGHTGPRTQFPQARRPPSAVVPRVAPRTKASPKGR*
Ga0070676_101876133	3300005328	Miscanthus Rhizosphere	SGGYPNPKGHTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR*
Ga0070676_103883272	3300005328	Miscanthus Rhizosphere	MAKGKSGGSYPNPKGHTGPKTQFPQAKRPPSAVVPRVVPRTKASPKGR*
Ga0070670_1000024193	3300005331	Switchgrass Rhizosphere	MAKSKSGSGYPNPKGHTGPKTQFPQAKRPVGGHPAPRVLPRTRASPKGR*
Ga0070670_1001266303	3300005331	Switchgrass Rhizosphere	MAKSKSGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR*
Ga0070670_1007324871	3300005331	Switchgrass Rhizosphere	RRSASATDQETRMAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAAVPRAMPRTKASPKGR
Ga0066388_1018483702	3300005332	Tropical Forest Soil	MTKGKESGYPNPKGHTGPKTQFPQAKRPPATVPRVAPRTKASPKGR*
Ga0066388_1026231192	3300005332	Tropical Forest Soil	MKPVAWVSSEREATMTKGKGGSGYPNPKGHTGPKTQFPQAKRPPSAVVPRVMPRTKASPKGR*
Ga0070677_101568612	3300005333	Miscanthus Rhizosphere	MSADDQETRMAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR*
Ga0070669_1003920202	3300005353	Switchgrass Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRILPRTRASPKGR*
Ga0070669_1010710263	3300005353	Switchgrass Rhizosphere	MAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR*
Ga0070669_1018983072	3300005353	Switchgrass Rhizosphere	MAKSKSGGSYPNPKGHTGPKTQFPQAKRPPSATVPRVVPRTKASPKGR*
Ga0070675_1000581314	3300005354	Miscanthus Rhizosphere	MTKGKGGGSYPNPKGHTGPRNQFPQARRPPSAVVPRVAPRTKASPKGR*
Ga0070673_1013444781	3300005364	Switchgrass Rhizosphere	EVSMAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRILPRTRASPKGR*
Ga0070667_1000470134	3300005367	Switchgrass Rhizosphere	MAKSKTGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR*
Ga0070667_1003918933	3300005367	Switchgrass Rhizosphere	MAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAAVPRAMPRTKASPKGR*
Ga0070708_1001301012	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTKGKGGGGYPNPKGHTGPKTQFPQAKRPPSATVPRVVPRTKASPKGR*
Ga0068867_1016214762	3300005459	Miscanthus Rhizosphere	MAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAVVPRAMPRTKASPKGR*
Ga0070686_1001739392	3300005544	Switchgrass Rhizosphere	MTKGKGGGSYPNPKGHTGPRNQFPQARRPPSAVVPRVAPRTKA
Ga0070665_1004686083	3300005548	Switchgrass Rhizosphere	SNFPTPKGHTGPKTQFPQARRPPSAVVPRVPTRTKASTKGR*
Ga0074479_103798281	3300005829	Sediment (Intertidal)	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPSAVVPRVVARTKASPKGR*
Ga0068863_1001125234	3300005841	Switchgrass Rhizosphere	PEVSMAKGKSGGSYPNPKGHTGPKTQFPQAKRPPSAVVPRVVPRTKASPKGR*
Ga0068860_1001982362	3300005843	Switchgrass Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNPAPRVLPRTRASPKGR*
Ga0068862_1002935832	3300005844	Switchgrass Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRVLPRTRASPKGR*
Ga0073920_10291152	3300005956	Sand	MAKSKSGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR*
Ga0075428_1008065793	3300006844	Populus Rhizosphere	VKRPKGEEADMAKGKSGSSYPNPKGHTGPKTQFPQARRPPSAVVPRVAPRTKASPKGR*
Ga0068865_1002456031	3300006881	Miscanthus Rhizosphere	RSMGAKRESRAGPETNMAKSKSGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR*
Ga0105090_100251562	3300009075	Freshwater Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVAARTKASPKGR*
Ga0102851_118580381	3300009091	Freshwater Wetlands	MAKGKSGSSYPNPKGHTGPKTQFPQARRPPSKIVPRVVARTKASAKGR*
Ga0115027_114171511	3300009131	Wetland	MAKGKGGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR*
Ga0105242_100631322	3300009176	Miscanthus Rhizosphere	LDTAGFSVDDKEATMAKAKGAAGGFPNPKGHTGPKMQFPQAKRPPSAVVPRVVARTKASPKGR*
Ga0105248_111908832	3300009177	Switchgrass Rhizosphere	DLNADFALIPEVSMAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRILPRTRASPKGR*
Ga0105340_12011892	3300009610	Soil	MAKSKSGGSYPNPKGHTGPKTQFPQAKRPPSAVVPRVVPRTKASP
Ga0126370_115727832	3300010358	Tropical Forest Soil	MTKGKGGGGYPNPKGHTGPKTQFPQAKRPPSAVVPRVMPRTKASPKGR*
Ga0075345_11860902	3300014312	Natural And Restored Wetlands	PKGHTGPKTQFPQARRPPAAVVPRVAARTKASPKGR*
Ga0075339_12400231	3300014316	Natural And Restored Wetlands	TADEGETTMAKGKSGSSYPNPKGHTGPKTQFPQARRPPAAVVPRVAARTKASPKGR*
Ga0163163_104431662	3300014325	Switchgrass Rhizosphere	MAKGKSGGSYPNPKGHTGPKTQFPQAKRPPAGMAPRVVPRTKASPKGR*
Ga0167658_10992282	3300015195	Glacier Forefield Soil	MAKDKGSGGYPNPKGHTGPKTQFPQGKKPPSTFVPRVMPRTKASPKGR*
Ga0180093_11470181	3300015258	Soil	MAKGKGGGSYPNPKGHTGPKMQFPQAKRPPSAVVPRVAPRTKASPKGR*
Ga0132258_122034552	3300015371	Arabidopsis Rhizosphere	MTKGKGGSGGYPNPKGHTGPKTQFPQARRPPSAVVPRVAPRTKASPKGR*
Ga0132258_122321871	3300015371	Arabidopsis Rhizosphere	MTKGKGSGGYPNPKGHTGPKTQFPQAKKPPSATVPRVMPRTKASPKGR*
Ga0132258_134215701	3300015371	Arabidopsis Rhizosphere	MTKGKGSGGYPNPKGHTGPKTQFPQAKRPPAAAVPRAMPRTKASPKGR*
Ga0132256_1005104202	3300015372	Arabidopsis Rhizosphere	MTKGKGGGGYPNPKGHTGPKTQFPQAKRPPAAAVPRAMPRTKASPKGR*
Ga0132255_1013629133	3300015374	Arabidopsis Rhizosphere	MTKGKGSGGYPNPKGHTGPKTQFPQAKKPPSATVPRVMPRTKASPKGS*
Ga0163161_120553251	3300017792	Switchgrass Rhizosphere	RSMGAKRDSRAGTETNMAKSKTGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR
Ga0187765_104461231	3300018060	Tropical Peatland	MTKGKGSGGYPNPKGHTGPKMQYPQAKRPPAAVVPRVMPRTKASPKGR
Ga0184628_100567173	3300018083	Groundwater Sediment	MAKSKSGGSYPNPKGHTGPKTQFPQAKRPPSAVVPRVVPRTKASPKGR
Ga0190274_131846432	3300018476	Soil	MTKGKGGSSSYPNPKGHTGPKTQFPQAKRPPSAVVPRVVPRTKASPKGR
Ga0207697_100316873	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MGAKRESRAGPETNMAKSKSGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR
Ga0207682_101081662	3300025893	Miscanthus Rhizosphere	MSADDQETRMAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR
Ga0207680_103022452	3300025903	Switchgrass Rhizosphere	MAKTKGGSGGYPNPKGHTGPKTQSPQAKRPPSGFVPRVAPRTKASPKGR
Ga0207643_100114763	3300025908	Miscanthus Rhizosphere	MTKGKGGGSYPNPKGHTGPRNQFPQARRPPSAVVPRVAPRTKASPKGR
Ga0207643_108495902	3300025908	Miscanthus Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRILPRTRASPKGR
Ga0207650_1000208614	3300025925	Switchgrass Rhizosphere	MAKSKSGSGYPNPKGHTGPKTQFPQAKRPVGGHPAPRVLPRTRASPKGR
Ga0207650_100087873	3300025925	Switchgrass Rhizosphere	MAKSKSGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRASPKGR
Ga0207650_100607043	3300025925	Switchgrass Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRVLPRTRASPKGR
Ga0207659_111607932	3300025926	Miscanthus Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNPAPRVLPRTRASPKGR
Ga0207701_101900934	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAKAKGSGGYPNPKGHTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR
Ga0207686_106131952	3300025934	Miscanthus Rhizosphere	LDTAGFSVDDKEATMAKAKGAAGGFPNPKGHTGPKMQFPQAKRPPSAVVPRVVARTKASPKGR
Ga0207711_100674502	3300025941	Switchgrass Rhizosphere	MAKGKSGGSYPNPKGHTGPKTQFPQAKRPPSAVVPRVVPRTKASPKGR
Ga0210089_10067062	3300025957	Natural And Restored Wetlands	MAKGKSGSSYPNPKGHTGPKTQFPQAKRPVGGHPAPRVLPRTRASPKGR
Ga0207651_115380651	3300025960	Switchgrass Rhizosphere	MTKGKGGGSYPNPKGHTGPRNQFPQARRPPSAVVPRVAP
Ga0207708_103257131	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	AAPADDQETRMAKAKGSGGYPNPKGYTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR
Ga0207675_1002646193	3300026118	Switchgrass Rhizosphere	MAKSKSGSSYPNPKGHTGPKTQFPQGKRPVGGHPAPRVLPRTRAS
Ga0209797_100235672	3300027831	Wetland Sediment	MAKAKGGGSYPNPKGHTGPKTQFPQARRPPATTVPRVMPRTKASAKGR
Ga0209797_100624222	3300027831	Wetland Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0209683_100037983	3300027840	Wetland Sediment	MTKGKGGTPYPNPKGHTGPKTQFPQARRPPQAVVPRVVARTKASPKGR
Ga0209254_101323152	3300027897	Freshwater Lake Sediment	MAKSKGRGSYPNPKGHTGPRTQFPQATRPPSAVVPRVAPRTKASPKGR
Ga0209254_101584202	3300027897	Freshwater Lake Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPSKIVPRVVARTKASAKGR
Ga0209668_100670303	3300027899	Freshwater Lake Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVAR
Ga0209253_100054523	3300027900	Freshwater Lake Sediment	MAKGKGRGSYPNPKGHTGPRMQAPQAGRPPAAVVPRVAPRTKASPKGR
Ga0209253_100334992	3300027900	Freshwater Lake Sediment	MAKGKGGGSYPNPKGHTGPRTQSPQARRPPSTKVPRIVPRTKASAKGR
Ga0209048_1000024029	3300027902	Freshwater Lake Sediment	MGKGKGKGSGGYPNPKGHTGPRTQFPHAGRPPSAVVPRVAPRTKASPKGR
Ga0209048_100163295	3300027902	Freshwater Lake Sediment	MAKGKGRGSYPNPKGHTGPRTQFPQAGRPPSAGVPRVAPRTKASPKGR
Ga0268265_104763551	3300028380	Switchgrass Rhizosphere	MAKVKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPR
Ga0268265_108549912	3300028380	Switchgrass Rhizosphere	FLADTGGGYMAKGKGSGSYPNPKGHTGPKMQFPQAKKPGGGNTAPRVLPRTRASPKGR
Ga0268265_123237501	3300028380	Switchgrass Rhizosphere	VSADDQETRMAKAKGSGGYPNPKGYTGPKTQFPQAKRPPSAGVPRVMPRTKASPKGR
Ga0307503_105671201	3300028802	Soil	MAKSKSGSGYPNPKGHTGPKTQFPQAKRPPSAVVPRVVARTKASPKGR
Ga0318516_105076492	3300031543	Soil	MDNPGGMMTKGKGGGGYPNPKGHTGPKTQFPQAKRPPSAAVPRVMPRTKASPKGR
Ga0307469_103832842	3300031720	Hardwood Forest Soil	MTKGKGGGGYPNPKGHTGPKMQFPQAKRPPSAVVPRVMPRTKASPKGR
Ga0307469_109621262	3300031720	Hardwood Forest Soil	MTKGKGGGGYPNPKGHTGPRTQFPQAKRPPSAAVPRVMPRTKASPKGR
Ga0302321_1020067712	3300031726	Fen	AAGSTAAVTEASMAKGKDTSHYPTPKGHTGPKTQFPQARRPPAAVAPRVVARTKASPKGR
Ga0307468_1004536342	3300031740	Hardwood Forest Soil	MTKNKGGGGYPNPKGHTGPKTQFPQARRPPSAVVPRVAPRT
Ga0307468_1007897832	3300031740	Hardwood Forest Soil	MAKGKSGGSYPNPKGHTGPKTQFPQAKRPPSAVVPRV
Ga0307468_1021729472	3300031740	Hardwood Forest Soil	HRVREVRKRFREATMTKGKGQGGYPNPKGHTGPKTQFPQAKRPPAAMVPRVAPRTKASPKGR
Ga0318502_108180422	3300031747	Soil	SQGGRAWADNDQEATMTKGKGGGGYPNPKGHTGPKMQFPQAKRPPSAVVPRAMPRTKASPKGR
Ga0307473_100702642	3300031820	Hardwood Forest Soil	MTKGKGQGGYPNPKGHTGPKTQFPQAKRPPAAMVPRVAPRTKASPKGR
Ga0318564_104283992	3300031831	Soil	DNDQEATMTKGKGGGGYPNPKGHTGPKMQFPQAKRPPSAVVPRAMPRTKASPKGR
Ga0315290_101027632	3300031834	Sediment	MAKSKSGGSFPNPKGHTGPKTQFPQARRPPTAVVPRVVARTKASPKGR
Ga0315290_102325492	3300031834	Sediment	EGEMTMAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315290_105354052	3300031834	Sediment	TMAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315290_111430931	3300031834	Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPSAVVPRVVARTKASPKGR
Ga0315290_112191811	3300031834	Sediment	MAKSKSRGNYPNPKGHTGPRTQFPQATRPPSAVVPRVAPRTKASPKGR
Ga0315290_112704262	3300031834	Sediment	MAKGKGGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315297_106396922	3300031873	Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPSAVVPRVVARTKASPK
Ga0306919_111353601	3300031879	Soil	MMTKGKGSGGYPNPKGHTGPKTQFPQAKRPPSAAVPRVMPRTKASPKGR
Ga0302322_1009178071	3300031902	Fen	MTKGKGGTPFPNPKGHTGPKTQFPQAKRPPQVVAP
Ga0306923_108663022	3300031910	Soil	ASTSQGGRAWADNDQEATMTKGKGGGGYPNPKGHTGPKMQFPQAKRPPSAVVPRAMPRTKASPKGR
Ga0306923_117354292	3300031910	Soil	MTKGKGGGGYPNPKGHTGPKTQFPQAKRPPSAAVPRVMPRTKASPKGR
Ga0311367_113584051	3300031918	Fen	MAKGKDTSHYPTPKGHTGPKTQFPQARRPPAAVAPRVVARTKASPKGR
Ga0318530_104645521	3300031959	Soil	MTKGKGGGGYPNPKGHTGPKMQFPQAKRPPSAVVPRAMPRTKASPKGR
Ga0315278_100324393	3300031997	Sediment	MAKGKGGGSFPNPKGHTGPKTQFPQARRPPSAVVPRVVPRTKASPKGR
Ga0315278_100982584	3300031997	Sediment	EGETTMAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0318563_101324732	3300032009	Soil	MDNPGGMMTKGKGSGGYPNPKGHTGPKTQFPQAKRPPSAAVPRVMPRTKASPKGR
Ga0315277_100625772	3300032118	Sediment	MAKGKGGGSFPNPKGHTGPKTQFPQARRPPASVVPRVVARTKASPKGR
Ga0315277_106407551	3300032118	Sediment	MAKGKGGGGFPNPKGHTGPKTQFPQARRPPTAVVPRVVARTKASPKGR
Ga0315292_117316932	3300032143	Sediment	GKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315295_111712982	3300032156	Sediment	GSYPNPKGHTGPKTQFPQARRPPTAVVPRVVARTKASPKGR
Ga0315283_1000344212	3300032164	Sediment	MAKGKGGGSYPNPKGHTGPKTQFPQARRPPSTTVPRVMPRTKASAKGR
Ga0315283_107602472	3300032164	Sediment	MAKSKSGGSFPNPKGHTGPKTQFPQARRPPTAVVPRVVAR
Ga0315283_112198922	3300032164	Sediment	YPNPKGHTGPKTQFPQARRPPATVVPRVVARTKASPKGR
Ga0315283_118711352	3300032164	Sediment	KGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315271_100181972	3300032256	Sediment	MTKGKGGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVVPRTKASPKGR
Ga0315271_100620381	3300032256	Sediment	MSKGKGGTPYPNPKGHTGPKTQFPQAKRPPQAVVPRVVARTKASPKGR
Ga0315271_101474952	3300032256	Sediment	MAKGKSGGSYPNPKGHTGPKTQFPQARRPPSAVVPRVVPRTKASPKGR
Ga0315271_106738912	3300032256	Sediment	MAKSKSGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315271_110427251	3300032256	Sediment	KGKGGGSFPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315271_115224532	3300032256	Sediment	MSKRKGDTPYPNPKGHTGPKTQFPQAKRPPQAVVPRVVARTKASPKGR
Ga0315286_113545381	3300032342	Sediment	MAKGKGGGSFPNPKGHTGPKTQFPQARRPPASVVPRVVART
Ga0315287_120996752	3300032397	Sediment	SADEGETTMAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0315287_128143212	3300032397	Sediment	ADEGETTMAKGKGGGSYPNPKGHTGPKTQFPQARRPPAAVVPRVVARTKASPKGR
Ga0335082_105353072	3300032782	Soil	MGKGKGGGGYPNPKGHTGPKTQFPQARRPPAAIVPRAMPRTKASPKGR
Ga0335080_107384382	3300032828	Soil	MTKGKGGGGYPNPKGHTGPKMQFPQAKRRPATVVPRVMPRTKASPKGR
Ga0335084_100407061	3300033004	Soil	MSKGKGGGGYPNPKGHTGPKMQFPQAKRPPSAAVPRVMPRTKASPKGR
Ga0335084_112447801	3300033004	Soil	MAKGKGGSYPNPKGHTGPKLQFPQARRPPSAPVARVMPRTKASAKGR
Ga0316601_1002967653	3300033419	Soil	TPYPNPKGHTGPKTQAPQARRPPQAVVPRVVTRTKASPKGR
Ga0316601_1012357092	3300033419	Soil	MAKGKSGSSYPNPKGHTGPKTQFPQARRPPSKIVPRVVARTKASAKGR
Ga0316630_108023751	3300033487	Soil	MAKGKSGSSYPNPKGHTGPKTQFPQARRPPSKIVPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences