Metagenome / Metatranscriptome Family F055478

Basic Information
Family ID	F055478
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	57 residues
Representative Sequence	MNPSMARWGVRGMDDFTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA
Number of Associated Samples	97
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.26 %
% of genes near scaffold ends (potentially truncated)	19.57 %
% of genes from short scaffolds (< 2000 bps)	52.90 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (79.710 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.058 % of family members)
Environment Ontology (ENVO)	Unclassified (31.159 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (31.159 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.12% β-sheet: 0.00% Coil/Unstructured: 65.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00210	Ferritin	3.62
PF01402	RHH_1	2.17
PF00313	CSD	2.17
PF00487	FA_desaturase	0.72
PF05532	CsbD	0.72
PF07978	NIPSNAP	0.72
PF00589	Phage_integrase	0.72
PF04751	DUF615	0.72
PF13683	rve_3	0.72
PF02518	HATPase_c	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.72
COG3028	Ribosomal 50S subunit-associated protein YjgA, DUF615 family	Translation, ribosomal structure and biogenesis [J]	0.72
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.72
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
All Organisms	root	All Organisms	20.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
cellular organisms	root	All Organisms → cellular organisms	20.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	16.67 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.45 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.45 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1.45 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1.45 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	1.45 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	16.67 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1.45 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.72 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2345914	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	899	Open in IMG/M
3300006894\|Ga0079215_10459637	Not Available	777	Open in IMG/M
3300007004\|Ga0079218_10466069	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1104	Open in IMG/M
3300007004\|Ga0079218_12999127	Not Available	568	Open in IMG/M
3300007790\|Ga0105679_10668869	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1109	Open in IMG/M
3300009081\|Ga0105098_10812073	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	506	Open in IMG/M
3300009137\|Ga0066709_103848031	Not Available	545	Open in IMG/M
3300009168\|Ga0105104_10160274	Not Available	1218	Open in IMG/M
3300009168\|Ga0105104_10628714	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	613	Open in IMG/M
3300009837\|Ga0105058_1068920	Not Available	806	Open in IMG/M
3300010081\|Ga0127457_1086195	Not Available	866	Open in IMG/M
3300010112\|Ga0127458_1143325	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1722	Open in IMG/M
3300010119\|Ga0127452_1147837	Not Available	1018	Open in IMG/M
3300010124\|Ga0127498_1051284	Not Available	541	Open in IMG/M
3300010132\|Ga0127455_1099444	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1481	Open in IMG/M
3300010142\|Ga0127483_1150651	Not Available	761	Open in IMG/M
3300010166\|Ga0126306_10758371	Not Available	781	Open in IMG/M
3300012021\|Ga0120192_10026953	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	935	Open in IMG/M
3300012201\|Ga0137365_10187791	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1547	Open in IMG/M
3300012201\|Ga0137365_10208701	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1458	Open in IMG/M
3300012204\|Ga0137374_10085377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3039	Open in IMG/M
3300012204\|Ga0137374_10446780	Not Available	1016	Open in IMG/M
3300012209\|Ga0137379_10494528	Not Available	1131	Open in IMG/M
3300012353\|Ga0137367_10101347	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2121	Open in IMG/M
3300012358\|Ga0137368_10473243	Not Available	811	Open in IMG/M
3300012358\|Ga0137368_10922123	Not Available	530	Open in IMG/M
3300012359\|Ga0137385_10660769	Not Available	875	Open in IMG/M
3300012360\|Ga0137375_10193960	Not Available	1930	Open in IMG/M
3300012373\|Ga0134042_1033729	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2080	Open in IMG/M
3300012374\|Ga0134039_1243897	Not Available	505	Open in IMG/M
3300012380\|Ga0134047_1234545	Not Available	679	Open in IMG/M
3300012392\|Ga0134043_1222078	Not Available	1093	Open in IMG/M
3300012393\|Ga0134052_1065273	Not Available	937	Open in IMG/M
3300012396\|Ga0134057_1124571	Not Available	694	Open in IMG/M
3300012400\|Ga0134048_1029425	Not Available	1292	Open in IMG/M
3300012406\|Ga0134053_1294253	Not Available	813	Open in IMG/M
3300012410\|Ga0134060_1419088	Not Available	787	Open in IMG/M
3300012469\|Ga0150984_103039239	Not Available	777	Open in IMG/M
3300012685\|Ga0137397_10190368	Not Available	1525	Open in IMG/M
3300012922\|Ga0137394_10099015	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2455	Open in IMG/M
3300012922\|Ga0137394_10494261	Not Available	1039	Open in IMG/M
3300012922\|Ga0137394_10554951	Not Available	974	Open in IMG/M
3300012922\|Ga0137394_10579573	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	950	Open in IMG/M
3300012930\|Ga0137407_10007434	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7561	Open in IMG/M
3300012930\|Ga0137407_11432173	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	657	Open in IMG/M
3300012944\|Ga0137410_11068128	Not Available	690	Open in IMG/M
3300017965\|Ga0190266_10521629	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	698	Open in IMG/M
3300018422\|Ga0190265_10209948	Not Available	1966	Open in IMG/M
3300018422\|Ga0190265_11381175	Not Available	820	Open in IMG/M
3300018422\|Ga0190265_11434048	Not Available	805	Open in IMG/M
3300018465\|Ga0190269_10261714	Not Available	982	Open in IMG/M
3300019257\|Ga0180115_1368867	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2091	Open in IMG/M
3300019377\|Ga0190264_10216762	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1073	Open in IMG/M
3300019377\|Ga0190264_10950283	Not Available	679	Open in IMG/M
3300020003\|Ga0193739_1055395	Not Available	1018	Open in IMG/M
3300020066\|Ga0180108_1078692	Not Available	3691	Open in IMG/M
3300027650\|Ga0256866_1072963	Not Available	918	Open in IMG/M
3300027886\|Ga0209486_10865053	Not Available	597	Open in IMG/M
3300027909\|Ga0209382_10074180	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4017	Open in IMG/M
3300030006\|Ga0299907_10036779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	3831	Open in IMG/M
3300030006\|Ga0299907_10210070	Not Available	1605	Open in IMG/M
3300030569\|Ga0247628_1260896	Not Available	516	Open in IMG/M
3300030571\|Ga0247652_1138991	Not Available	578	Open in IMG/M
3300030619\|Ga0268386_10505012	Not Available	827	Open in IMG/M
3300030830\|Ga0308205_1008281	Not Available	1013	Open in IMG/M
3300030903\|Ga0308206_1146239	Not Available	566	Open in IMG/M
3300030987\|Ga0308155_1016148	Not Available	654	Open in IMG/M
3300030990\|Ga0308178_1001772	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2145	Open in IMG/M
3300030990\|Ga0308178_1002301	Not Available	2008	Open in IMG/M
3300030993\|Ga0308190_1148675	Not Available	556	Open in IMG/M
3300031095\|Ga0308184_1063459	Not Available	501	Open in IMG/M
3300031124\|Ga0308151_1035578	Not Available	567	Open in IMG/M
3300031424\|Ga0308179_1017585	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	760	Open in IMG/M
3300031901\|Ga0307406_10038419	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2963	Open in IMG/M
3300031995\|Ga0307409_102049848	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	602	Open in IMG/M
3300032004\|Ga0307414_10680336	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	930	Open in IMG/M
3300032005\|Ga0307411_11043779	Not Available	734	Open in IMG/M
3300032180\|Ga0307471_100633206	Not Available	1231	Open in IMG/M
3300034448\|Ga0370540_00033	Not Available	3291	Open in IMG/M
3300034448\|Ga0370540_00646	Not Available	1290	Open in IMG/M
3300034643\|Ga0370545_001014	Not Available	2914	Open in IMG/M
3300034643\|Ga0370545_010067	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300034643\|Ga0370545_038228	Not Available	892	Open in IMG/M
3300034644\|Ga0370548_021838	Not Available	984	Open in IMG/M
3300034680\|Ga0370541_003876	Not Available	1289	Open in IMG/M
3300034680\|Ga0370541_007086	Not Available	1057	Open in IMG/M
3300034680\|Ga0370541_018881	Not Available	763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.93%
Host-Associated	Host-Associated	5.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.51%
Aquatic	Environmental → Aquatic	9.42%
Plants	Host-Associated → Plants	5.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.51%
Freshwater	Environmental → Aquatic → Freshwater	9.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.07%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Sand	Environmental → Terrestrial → Soil → Sand	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Loam	Environmental → Terrestrial → Soil → Loam	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	72.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.12%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	18.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.35%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010142	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012374	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300029652	Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S3_20-13C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030569	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030571	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb5 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030604	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030634	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034448	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23459142	3300000033	Soil	MRGMHDLTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMQPKTAHPADRRETL*
F24TB_112051522	3300000550	Soil	MNPIIXXPGTREDLPRWGMRAMDDFSVEDLAQLQQKLARWIGQRALQPERTRRRPWMMQPNTTHPADRRETL*
Ga0079215_104596373	3300006894	Agricultural Soil	MHPIMPRWGIRGMDDFTVEELAQLHQKLDGWIRQRAHDPERPRRRPWLVRKP
Ga0079218_104660693	3300007004	Agricultural Soil	MNPIMTRWGMRGMDDFTVEELAQLRQKLAAWIGQRAPQTERTRRRPWVMKPKTAHPA*
Ga0079218_129991272	3300007004	Agricultural Soil	MEDFTVEELARLHQKLDGWIRQRAHDPERPQRRPWVRHPPRGHLTDRKESP*
Ga0079218_135881832	3300007004	Agricultural Soil	MNPIMKQPGTREDLPRWGMRGMHDLTVEELARLQQKLDGWIRQRAHDPERPRRRPWVMTPHTAQPTDRRERT*
Ga0105679_106688694	3300007790	Soil	EDFTVEELAQLHQKVEEWIRQRAPRPERARRRPWVMTKPRAAGSA*
Ga0105098_105603352	3300009081	Freshwater Sediment	MEDFTVEELAQLHQKLDGWIHQRAHDPERTRRRPWVMKPKTAHPA*
Ga0105098_106518951	3300009081	Freshwater Sediment	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERPRRRPWVMKPKAAHPA*
Ga0105098_108120732	3300009081	Freshwater Sediment	GMRGMDAFTGEELARLQQKLDGWIRQRAPQTERTRRRPWVMKPKTAHPA*
Ga0066709_1038480312	3300009137	Grasslands Soil	MNPKITQNRTPEGLGRWGMRGMDDFTVEELAWLQHKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA*
Ga0114129_109848751	3300009147	Populus Rhizosphere	RWGMRGMQDFTVEELARLRQKLDGWIRHRAHTPERPQPRPWVRHPHPAHRRETP*
Ga0105092_105679941	3300009157	Freshwater Sediment	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA*
Ga0105104_101602742	3300009168	Freshwater Sediment	MNPIIQQPGTREDLPRWGMRAMDDFSVEELAQLQQKLARWIGQRALQTERTRRRPWVMKPKTAHPA*
Ga0105104_106287142	3300009168	Freshwater Sediment	MTRWGIRGMDDLTVEELAQLQQKLEGWIRQRAHDPERPRRRPWVMQPKTAHPA*
Ga0105058_10689203	3300009837	Groundwater Sand	MNPSITQRRMPEGLGRWGMRGMEDFTVEELAQLHQKLEGWIHQRAHDPERTRRRPWVMKPKTAHPA*
Ga0126314_114128971	3300010042	Serpentine Soil	MNPKIKQNRTPEGLGRWGIRGMDDFTPEELARLHQKLEGWIHQRAHDPERTRRRPWVMKPKMAHPA*
Ga0127457_10861953	3300010081	Grasslands Soil	MHSSMARWRMRGTDACTVEALARWQQKRDRWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0127497_10892511	3300010109	Grasslands Soil	MHSSMARWGMRGMDDCTVEALARWHQTLDGWIGPRAPQTERPRRRPWVMQPHTAHPA*
Ga0127458_11433254	3300010112	Grasslands Soil	MHPSMTRWRMRGMDACTVEALARWQQKRDRWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0127452_11478372	3300010119	Grasslands Soil	MHPSMARWRMRGMDACTVEALARWQQKRDRWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0127498_10512841	3300010124	Grasslands Soil	EGLGRWGIRGMDDFTVEELARLHQKLDGWIHQRAHDPERTRRRPWMMQPKTAHPA*
Ga0127455_10994443	3300010132	Grasslands Soil	MNPIMARWGIRGIDDFTVEELPRLPQKLDGCIGQRARDPERTRRRPWVMQPNSAKPA*
Ga0127447_10879342	3300010136	Grasslands Soil	MHSRMARWGMRGMDDLTVEARAPWHQTLDGWIGPRAPQTERTRRRPWVMQSHTAHPA*
Ga0127483_10534122	3300010142	Grasslands Soil	MNAKIKQNRTPEGLGRWGIRGMDDFTVEELAWLQHKLDGWIRQRAHDPERPRRRPWVSHPHTAYSADRREST*
Ga0127483_11506513	3300010142	Grasslands Soil	MHPIMARWGIRGIDDFTVEELPRLPQKLDGCIGQRARDPERTRRRPWVMQPKMAKPA*
Ga0126321_12858261	3300010145	Soil	MNDFTVEELARLHQKLDGWIGQQAHDPERPRRRPWVMQPKRAHPA*
Ga0126306_107583712	3300010166	Serpentine Soil	MNDFTDEELARLNQKLDGWIGQRAHDPERPRRRPWVMQPKTAHPA*
Ga0134063_102050781	3300010335	Grasslands Soil	PTGGRMHPIMARWGIRGIDDFTVEELPRLPQKLDGCIGQRARDPERTRRRPWVMQPKMAKPA*
Ga0120192_100269532	3300012021	Terrestrial	MNPSMARWGVRGMDDFTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA*
Ga0137365_101877914	3300012201	Vadose Zone Soil	GGRLPPISTRWGMRGMNDLTVEELAQLHQKLARWIGPRAQQTERTRRRPWVMKPKTTHPADRRETL*
Ga0137365_102087013	3300012201	Vadose Zone Soil	MHSSMARWGMRGMDDLTVEARAPWHQTLDGWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0137374_100853775	3300012204	Vadose Zone Soil	MHPSMARWGMRGMDALTVEARARWQQKLEGWIRQRAPQTERPRRRPWVMQPNTTHLA*
Ga0137374_104467803	3300012204	Vadose Zone Soil	MHPIMARWGMRGMDDLTVEELARLQQKLDGWIGQRARDPERTRRRPWVMQPNMAKPA*
Ga0137379_104945283	3300012209	Vadose Zone Soil	MHSRMARWGMRGMDDLTVEARAPWHQTLDGWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0137372_105331281	3300012350	Vadose Zone Soil	GRMHPIMARWGIRGIDDFTVEELPRLPQKLDGCIGQRARDPERTRRRPWVMQPKMAKPA*
Ga0137367_101013473	3300012353	Vadose Zone Soil	MHPSMARWGMRGMDDFTVEALARWQQKLEGWIRQRAPQTERPRRRPWVMQRKTTHLA*
Ga0137369_104209572	3300012355	Vadose Zone Soil	MNPKIKQNRTPEGLGRWGIRGMDDFTPEELARLHQKLEGWIHQRAHDPERTRRRPWVMKPKTAHPA*
Ga0137384_102449912	3300012357	Vadose Zone Soil	MHSRMARWGMRGMDELTVEARARWHQTLDGWIGPRPPQPERTRRRPWVMQPHTAHPA*
Ga0137368_100735162	3300012358	Vadose Zone Soil	MNPIIARRRIRGIDDFTVEELARLQQKLEGWIRQRAPHPERTRRRPWLVMKPKTANPA*
Ga0137368_104732431	3300012358	Vadose Zone Soil	MHPSMARWRMRGMDACTVEALARWQQKRDRWSGQRARDPERTRRRPWVMQPNMAKPA
Ga0137368_109221231	3300012358	Vadose Zone Soil	MNPKIKQNRTPEGLGRWGIRGMDDFTPEELARLHQKLEGWIHQRAHDPERTRRRPWVMKP
Ga0137385_106607692	3300012359	Vadose Zone Soil	MHSSMARWGMRGMDDCTVEALARWHQTLDGWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0137375_101939601	3300012360	Vadose Zone Soil	MHPSMARWGMRGMDALTVEARARWQQKLEGWIRQRAPQTERPRRRPWVMQRKTTHLA*
Ga0134027_10529563	3300012364	Grasslands Soil	MNDLTVEELAQLHQKLARWIGPRAQQTERTRRRPWVMKPKT
Ga0134042_10337292	3300012373	Grasslands Soil	MNDLTVEELAQLHQKLARWIGPRAQQTERTRRRPWVMKPKTTHPADRRETL*
Ga0134042_10688352	3300012373	Grasslands Soil	MNDFTVEELARLHQKLDGWIGQRAHDPERPRRQPWVMQPKRAHPA*
Ga0134039_12438971	3300012374	Grasslands Soil	DFTVEELAWLQHKLDGWIRQRAHDPERPRRRPWVMPPKTAHPA*
Ga0134047_12345452	3300012380	Grasslands Soil	MNPKITQNRTPEGLGRWGMRGMDDFTVEELAWLQHKLDGWIRQRAHDPERPRRRPWVMQPKTAHPA*
Ga0134043_12220783	3300012392	Grasslands Soil	MHSRMARWGMRGMDDLTVEARARWHQTLDGWIGPRAPQTERTRRRPWVMPPHTAHPA*
Ga0134052_10652732	3300012393	Grasslands Soil	MHSSMARWRMRGTDACTVEALARWHQTLDGWIGPRAPQTERTRRRPWVMQPHTAHPA*
Ga0134044_11871221	3300012395	Grasslands Soil	MNPKITQNRTPEGLGRWGMRGMEDFTVEALAWLHHKLDGWIRQRAHDPERPRRRPWVMQPKTAHPA*
Ga0134057_11245712	3300012396	Grasslands Soil	MNPKITQNRTPEGLGRWGMRGMEDFTVEALAWLHHKLDGWIRQRAHDPERTRRRPWVMQPKTAHPA*
Ga0134048_10294252	3300012400	Grasslands Soil	MNPSIKQSRTPEGLGRWGIRGMEDFTVEELARLHHKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA*
Ga0134048_13632971	3300012400	Grasslands Soil	MNPKITQNRTPEGLGRWGMRGMEDFTVEALAWLHHKLDGWIRQRAHDPERPRRRPWVRHPHTAYSADRREST*
Ga0134059_12233282	3300012402	Grasslands Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERTRRRPWVMQPKTAHPA*
Ga0134053_12942532	3300012406	Grasslands Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLHQKLDGWIHQRAHDPERTRRRPWVMQPKTAHPA*
Ga0134050_14473371	3300012407	Grasslands Soil	MHSRMARWGMRGMDDLTVEARAPWHQTLDGWIGPRAPQTERTRRRPWVMQ
Ga0134060_14190882	3300012410	Grasslands Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLHQKLDGWIHQRAHDPERTRRRPWVMKPKTAHPA*
Ga0150984_1030392391	3300012469	Avena Fatua Rhizosphere	EDFTVEALARLHQTRDGGIRQRTPQTERTRRRPWVMQPNTAHPA*
Ga0137397_101903684	3300012685	Vadose Zone Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWIRQRAHDPERTRRRPWVMRTKTAHPA*
Ga0137397_112566441	3300012685	Vadose Zone Soil	MEDFSVEELAQLHQKLEGWIRKRAHDPERTQRRPWVMRPKTAHPA*
Ga0137394_100990151	3300012922	Vadose Zone Soil	EELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKTAHPADRRETL*
Ga0137394_102788291	3300012922	Vadose Zone Soil	MHDLTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKTAHPADR
Ga0137394_104942612	3300012922	Vadose Zone Soil	MNPSTKQSRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA*
Ga0137394_105549511	3300012922	Vadose Zone Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERTRRRPWV
Ga0137394_105795734	3300012922	Vadose Zone Soil	MDDFTAEELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKTAHPADR
Ga0137407_100074344	3300012930	Vadose Zone Soil	MNAKIKQNRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA*
Ga0137407_114321733	3300012930	Vadose Zone Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERPRRRPWVMQPKTAHPA*
Ga0137410_110681281	3300012944	Vadose Zone Soil	QSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA
Ga0137405_10339985	3300015053	Vadose Zone Soil	QSRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA
Ga0190266_105216291	3300017965	Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLHQKLDGWIGQRAHDPERPRR
Ga0190265_100563356	3300018422	Soil	MNPSMPRWGIRGMEDLTVEELAQLHQKLDGWIRQRAHDSERPRRRPWVMKPKTAHPA
Ga0190265_102099484	3300018422	Soil	MNPISTRWGMRGMEDLTVEELVRLQQKLDGWIRQRAHDPKRLRRRPWVMKPHTAHPA
Ga0190265_113811753	3300018422	Soil	MNPIMKQPGTREDLPRWGMRRMEDLTVEELARLPQQLDGWMRQRAHDPERPRRRPWVMKSHTAYPA
Ga0190265_114340481	3300018422	Soil	MEDFMVEELARLQQKLDGWIRQRGHDPKRAQRRPWVRHRHTAHAADRRENP
Ga0190265_134512842	3300018422	Soil	MNPIIARWGIRGIDDFTVEELARLHQKLAEWIRQRAPQTARTRRRPWVMKPKTAKPA
Ga0190269_102617144	3300018465	Soil	MNPSIKQSRTPEGLGRWGMRGMEDFTVEELAQLHQKLDGWIHQRAHDPERTRRRPWVMQPNTAHPADRRETL
Ga0190270_105118021	3300018469	Soil	MPQIVARWGIRGMDDFTVEELERLHQKLEGWVRQRVPQKERTRRRPWVMQPKTAHSA
Ga0180116_13133122	3300019229	Groundwater Sediment	VRDELDAARTGGRMHPSLTQSGTPAGLGRWGMRGMEDFTVEELAQLHLKLAGWIHQRAHDPERTRRRPWVMQPKTAHQT
Ga0184641_13182861	3300019254	Groundwater Sediment	MNPKITQNRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWISQRAHDPEHTRRRPWVMKPKTAHPA
Ga0180115_13688672	3300019257	Groundwater Sediment	MHPIVARWGIRGMDDFTVEELARLQQKLAGWIQQRAPQAKRTRRRPWVMQPKTAHQA
Ga0184644_11133101	3300019269	Groundwater Sediment	MNDFTVEELARLHQKLDGWIGQRAHDPERPRRRPWVMQPKRAHPA
Ga0190264_102167623	3300019377	Soil	MEDFTVEELARLQQKLDGWIRQRAHDPARPQRRPWVRHPPRGHLTDRKEIP
Ga0190264_109502831	3300019377	Soil	MRGMEDFTVEELARLHQKLDGWIRQRAHDPKRLRRRPWVMKPHTAHPA
Ga0193739_10553952	3300020003	Soil	MNPIIPRWGIRGMDALTVEELAQLQQKLDGWIRQRAPQTERTRRRPWVMKPKTAHPA
Ga0180108_10786923	3300020066	Groundwater Sediment	MPPIMARWGIRGMDDFTVEELARLHQKLEGWVRERVPQKERTRRRPWVMQPKTAHSA
Ga0256866_10729632	3300027650	Soil	MDDLSVEELAQVHQKFARWIGQRAHDPERPRRRPWVMQSKTAHPA
Ga0209593_101925041	3300027743	Freshwater Sediment	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA
Ga0209486_108650531	3300027886	Agricultural Soil	MNPIMTRWGMRGMDDFTVEELAQLRQKLAAWIGQRAPQTERTRRRPWVMKPKTAHPA
Ga0209486_111034832	3300027886	Agricultural Soil	MEDFTVEELARLHQKLDGWIRQRAHDPERPQRRPWVRHPPRGHLTDRKESP
Ga0209382_100741802	3300027909	Populus Rhizosphere	MMGRWGMRSMQDFTVEELARLRQKLDGWIRHRAHTPERPQPRPWVRHPHPAHRRETP
Ga0206099_1045413	3300029652	Soil	MNPLIQQPGTREDLPRWGRRGMDDLTVEALARLHQTLDGWIRQRAHDPERPRRRPWVRHPHTAHPA
Ga0299907_100367795	3300030006	Soil	MDDLSVEELAQLHQKFARWIGQRAHDPERPRRRPWVMQSKTAHPA
Ga0299907_102100702	3300030006	Soil	MNPSMPRWGIRGMEDFTVEELAQLHQKLDGWIRQRAHDSERPRRRPWVMKPKTAHPA
Ga0247628_12608962	3300030569	Soil	GMRGMKDFSVEELAQLHQKLEGWIGQRAPQTERPGRRPWVMKPKTAHPA
Ga0247652_10869821	3300030571	Soil	MNPISTRWGMRGMEDLTVEELARLHQKLAGWIRQRAYDPEHPRLRPWVMKSNTAHPA
Ga0247652_11389911	3300030571	Soil	IIARWGIRGIEDFTVEELARLPQKRDGWIGQRAPQTERIRRRTWVMQLNTTRPA
Ga0247637_11162082	3300030604	Soil	EELARLHQKLDGWIRQRAPQTERTRRRPWVMKPKTAHSA
Ga0268386_105050121	3300030619	Soil	RGMDDFTVEELACLQQKLDGWIRQRAPQTKRPRRRPWVMKPNTARLA
Ga0247636_103339221	3300030634	Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRARDPERTRRRPWVMRPKTAHPA
Ga0308205_10082813	3300030830	Soil	MNPKITQNRTPEGLGRWGIRGMDDFTPEELARLHQKLEVWIHQRAHDPERTRRRPWVMKPKTAHPA
Ga0308205_10506081	3300030830	Soil	MHDLTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKT
Ga0308152_1069982	3300030831	Soil	MNDFTVEELARLHQKLDGWIGQRAHDPERTRRRPWMMQPKTTHPADRRETL
Ga0308206_11462392	3300030903	Soil	MNPKIKQNRTPEGLGRWGMRGMDDFTPVELARLHQKLEGWIHQRDKDPERTRRRPWVMKPKTAHPA
Ga0308155_10161481	3300030987	Soil	MNPIMTQPGTREDLPRWGMRGMEDLTVEALARLQQKRDGWIRQRAHNPGRPRRRPWVMKSNTAHPA
Ga0308178_10017724	3300030990	Soil	MNPIMTQPGTREDLPRWGMRGMEDLTVEALARLQQKRDGWIRQRAHNPGRPRRRP
Ga0308178_10023011	3300030990	Soil	MNPKIKQNRTPEGLGRWGMRGMDDFTPEELARLHQKLEGWIHQRAHDPERTRRRPWVMKPKTAHPA
Ga0308190_11486753	3300030993	Soil	ARLHQKLEGWIRQRAPQTERTPRRPWVMQPKTAHPA
Ga0308184_10634591	3300031095	Soil	PGTREDLPRWGMRAMDDFSVEELTQLQQKLARWIGQRALQPERTRRRPWVMKPKTAHPA
Ga0308181_11113441	3300031099	Soil	MNPIMTPPGTREDLPRWGMRGMEDLTVEALARLQQKRDGWIRQRAHNPGRPRRRPWVMKSNTAHPA
Ga0308187_102311552	3300031114	Soil	MNDLTVEELARLQQKLDGWIGQRAHDPERTRRRPWVMKPKTAHPA
Ga0308151_10021864	3300031124	Soil	MDDFTVEELARLHQKLEGWIRQRVPQTERTRRRPWVMQPKTAHPA
Ga0308151_10138343	3300031124	Soil	MNDFTVEELARLHQKLDGWIGQRAHDPERPRRRPWVMQPKTAHPADRRETR
Ga0308151_10355781	3300031124	Soil	KLDAPPTEGRMNPIVARWGIRRMDDFTVEELARLHQKLEGWIRQRAHDPERTRRRPWVMKTKTLPPA
Ga0308177_10051101	3300031423	Soil	MPPITTRWGIRGMDDFTVEELARLHQKLQGWIRQRAPQTERTRRRPWVMQPKTAHPA
Ga0308179_10103412	3300031424	Soil	MNPIIPRWGIRGMDDFTVEELARLQQKLDGWIRQRARDPERSRRRPWVMKPKTAHPA
Ga0308179_10132733	3300031424	Soil	MNDFTVEELARLHQKLDGWIGQRAHDPERPRRRPWVMQLKRAHPA
Ga0308179_10175853	3300031424	Soil	GMRGMDDFTVEELALLQQKLDGWIGQRVPQTERSRRRPWRMQPKTAHPADRRETT
Ga0307406_100384194	3300031901	Rhizosphere	MNPIIKQPGTREDLPRWGMRGMDDVTVEALARWHQKLDGWIRQRAHDPERPRRRPWVMQPHTAHPA
Ga0307409_1020498481	3300031995	Rhizosphere	GMNDFTVEELARLHQKLDGWIGQRAHDPERPRRRPWVMQPKTAHPA
Ga0307414_106803361	3300032004	Rhizosphere	LTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMQPKRAHPADRRETL
Ga0307411_110437792	3300032005	Rhizosphere	MNPIMKQPGTREDLPRRGMRGMHDLTVEELARLQQKLDGWIRQRAHDPERTRRRPWVMKPKRAHPADRKETL
Ga0307471_1006332062	3300032180	Hardwood Forest Soil	MNPSIKQSRTPEGLGRWGIRGMDDFTVEELARLQHKLDGWIRQRARDPERTRRRPWVMKSKTAHPA
Ga0370540_00033_2164_2364	3300034448	Soil	MNPKITQNRTPEGLGRWGIRGMDDFTVEELAWLQHKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA
Ga0370540_00646_1035_1190	3300034448	Soil	MDDFTAEELARLQQKLDGWIGQRAHDPERTRRRPWMMQPKTTHPADRRETL
Ga0370545_001014_2190_2390	3300034643	Soil	MHPSITQNRTPEGLGRWGMRGMEDFSVEELAQLQQKLARWIGQRAHDPERTPRRPWVMQPKTVHPA
Ga0370545_010067_434_607	3300034643	Soil	MHPIMPRWGIRGMDDFTVEELARLHQKLEGWIRQRAPQTERTRRRPWVMQPKTAHPA
Ga0370545_013380_537_674	3300034643	Soil	MEDFTVEELAQLHQKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA
Ga0370545_038228_123_260	3300034643	Soil	MEDFSVEELAQLHQKLEGWIRQRAHDPERPQHRPWVMTPKTALSA
Ga0370545_041444_225_362	3300034643	Soil	MEDFSLEELAQLHQKLEGWMGQRAHDPKRPQRRPWIMKPNTAHPV
Ga0370545_064721_530_703	3300034643	Soil	MPPIMARRGIRGMDDFTVEELARLHQKLEGWIRQRAPQTERTPRRPWVMQHKTAHTA
Ga0370545_078061_490_627	3300034643	Soil	MEDFTVEELAQLHQKLEGWIHQRAHDPERTRRRPWVMRPNTAHPA
Ga0370548_021838_291_491	3300034644	Soil	MNPKIKQNRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWISQRAHDPEHTRRRPWVMKPKTAHPA
Ga0370541_003876_643_780	3300034680	Soil	MNDFTVEELARLHQKLDGWIGQRAHDPARPRRRPWVMQPKRAHPA
Ga0370541_007086_724_924	3300034680	Soil	MNPKIKQNRTPEGLGRWGIRGMDDFTPEELARLHQKLEGWIHQRAHDPERTRRRPWVMKPKTAHPA
Ga0370541_018881_2_184	3300034680	Soil	QNRTPEGLGRWGIRGMDDFTVEELAWLQHKLDGWIRQRAHDPERTRRRPWVMKPKTAHPA
Ga0370546_070834_159_359	3300034681	Soil	MNPKITQNRTPEGLGRWGIRGMDDFTVEELAQLQHKLDGWIRQRAHDPERTRRRPWVMRPKTAHPA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055478

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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