Metagenome / Metatranscriptome Family F055380

Basic Information
Family ID	F055380
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	45 residues
Representative Sequence	QQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNGALIV
Number of Associated Samples	78
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	34.56 %
% of genes near scaffold ends (potentially truncated)	86.96 %
% of genes from short scaffolds (< 2000 bps)	98.55 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (47.826 % of family members)
Environment Ontology (ENVO)	Unclassified (95.652 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (94.928 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.26% β-sheet: 0.00% Coil/Unstructured: 59.74%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300002933\|G310J44882_10087944	Not Available	658	Open in IMG/M
3300003783\|Ga0007850_1010822	Not Available	724	Open in IMG/M
3300003789\|Ga0007835_1007065	Not Available	1073	Open in IMG/M
3300003793\|Ga0007847_104517	Not Available	773	Open in IMG/M
3300003793\|Ga0007847_109942	Not Available	517	Open in IMG/M
3300003805\|Ga0007838_1006382	Not Available	775	Open in IMG/M
3300003805\|Ga0007838_1008024	Not Available	675	Open in IMG/M
3300003813\|Ga0007879_1005728	Not Available	1644	Open in IMG/M
3300003815\|Ga0007856_1015183	Not Available	501	Open in IMG/M
3300003823\|Ga0007875_1023275	Not Available	690	Open in IMG/M
3300003827\|Ga0007880_1015069	Not Available	703	Open in IMG/M
3300003827\|Ga0007880_1015069	Not Available	703	Open in IMG/M
3300004770\|Ga0007804_1147986	Not Available	589	Open in IMG/M
3300004770\|Ga0007804_1149222	Not Available	586	Open in IMG/M
3300004771\|Ga0007797_1114971	Not Available	694	Open in IMG/M
3300004772\|Ga0007791_10141466	Not Available	707	Open in IMG/M
3300004772\|Ga0007791_10148047	Not Available	687	Open in IMG/M
3300004772\|Ga0007791_10182507	Not Available	603	Open in IMG/M
3300004772\|Ga0007791_10187061	Not Available	594	Open in IMG/M
3300004774\|Ga0007794_10153183	Not Available	688	Open in IMG/M
3300004777\|Ga0007827_10080858	Not Available	737	Open in IMG/M
3300004777\|Ga0007827_10080858	Not Available	737	Open in IMG/M
3300004777\|Ga0007827_10137184	Not Available	545	Open in IMG/M
3300004804\|Ga0007796_10196392	Not Available	594	Open in IMG/M
3300004804\|Ga0007796_10233437	Not Available	535	Open in IMG/M
3300004807\|Ga0007809_10157287	Not Available	668	Open in IMG/M
3300006072\|Ga0007881_1154262	Not Available	559	Open in IMG/M
3300006101\|Ga0007810_1053511	Not Available	829	Open in IMG/M
3300006101\|Ga0007810_1073363	Not Available	677	Open in IMG/M
3300006101\|Ga0007810_1073363	Not Available	677	Open in IMG/M
3300006103\|Ga0007813_1051694	Not Available	849	Open in IMG/M
3300006103\|Ga0007813_1069070	Not Available	704	Open in IMG/M
3300006103\|Ga0007813_1100073	Not Available	557	Open in IMG/M
3300006105\|Ga0007819_1095472	Not Available	594	Open in IMG/M
3300006105\|Ga0007819_1118936	Not Available	515	Open in IMG/M
3300006110\|Ga0007871_1062184	Not Available	702	Open in IMG/M
3300006111\|Ga0007848_1045567	Not Available	832	Open in IMG/M
3300006112\|Ga0007857_1061086	Not Available	710	Open in IMG/M
3300006112\|Ga0007857_1061086	Not Available	710	Open in IMG/M
3300006114\|Ga0007815_1071077	Not Available	701	Open in IMG/M
3300006114\|Ga0007815_1116975	Not Available	507	Open in IMG/M
3300006115\|Ga0007816_1085708	Not Available	695	Open in IMG/M
3300006116\|Ga0007807_1087908	Not Available	576	Open in IMG/M
3300006121\|Ga0007824_1096653	Not Available	556	Open in IMG/M
3300006121\|Ga0007824_1099873	Not Available	546	Open in IMG/M
3300006123\|Ga0007852_1086173	Not Available	709	Open in IMG/M
3300006123\|Ga0007852_1086173	Not Available	709	Open in IMG/M
3300006126\|Ga0007855_1080173	Not Available	683	Open in IMG/M
3300006126\|Ga0007855_1083572	Not Available	667	Open in IMG/M
3300009175\|Ga0073936_10427617	Not Available	801	Open in IMG/M
3300009175\|Ga0073936_10545303	Not Available	671	Open in IMG/M
3300009175\|Ga0073936_10560250	Not Available	658	Open in IMG/M
3300009175\|Ga0073936_10561125	Not Available	657	Open in IMG/M
3300009175\|Ga0073936_10562739	Not Available	656	Open in IMG/M
3300009175\|Ga0073936_10567160	Not Available	652	Open in IMG/M
3300009175\|Ga0073936_10655669	Not Available	590	Open in IMG/M
3300009175\|Ga0073936_10679718	Not Available	576	Open in IMG/M
3300009175\|Ga0073936_10692619	Not Available	568	Open in IMG/M
3300009175\|Ga0073936_10709082	Not Available	558	Open in IMG/M
3300009175\|Ga0073936_10755506	Not Available	533	Open in IMG/M
3300010157\|Ga0114964_10387117	Not Available	660	Open in IMG/M
3300012698\|Ga0157570_1093548	Not Available	578	Open in IMG/M
3300012701\|Ga0157562_1158813	Not Available	658	Open in IMG/M
3300013093\|Ga0164296_1221623	Not Available	723	Open in IMG/M
3300013093\|Ga0164296_1233708	Not Available	700	Open in IMG/M
3300013093\|Ga0164296_1338661	Not Available	560	Open in IMG/M
3300013094\|Ga0164297_10182263	Not Available	824	Open in IMG/M
3300013094\|Ga0164297_10232637	Not Available	709	Open in IMG/M
3300013094\|Ga0164297_10233117	Not Available	708	Open in IMG/M
3300013094\|Ga0164297_10244197	Not Available	689	Open in IMG/M
3300013094\|Ga0164297_10369319	Not Available	548	Open in IMG/M
3300013094\|Ga0164297_10385144	Not Available	536	Open in IMG/M
3300016678\|Ga0180045_118060	Not Available	679	Open in IMG/M
3300020685\|Ga0214256_118022	Not Available	577	Open in IMG/M
3300020686\|Ga0214194_122212	Not Available	527	Open in IMG/M
3300020689\|Ga0214210_1014168	Not Available	691	Open in IMG/M
3300020694\|Ga0214197_1016665	Not Available	703	Open in IMG/M
3300020694\|Ga0214197_1016771	Not Available	701	Open in IMG/M
3300020702\|Ga0214218_1006908	Not Available	1283	Open in IMG/M
3300020707\|Ga0214238_1040415	Not Available	510	Open in IMG/M
3300020710\|Ga0214198_1026308	Not Available	715	Open in IMG/M
3300020710\|Ga0214198_1046699	Not Available	511	Open in IMG/M
3300020712\|Ga0214255_1025933	Not Available	692	Open in IMG/M
3300020719\|Ga0214257_1027086	Not Available	711	Open in IMG/M
3300020724\|Ga0214244_1035567	Not Available	695	Open in IMG/M
3300020726\|Ga0214220_1034679	Not Available	680	Open in IMG/M
3300020726\|Ga0214220_1034679	Not Available	680	Open in IMG/M
3300020728\|Ga0214202_1035976	Not Available	691	Open in IMG/M
3300020733\|Ga0214172_1041627	Not Available	665	Open in IMG/M
3300020735\|Ga0214219_1048579	Not Available	617	Open in IMG/M
3300021115\|Ga0214174_118771	Not Available	556	Open in IMG/M
3300021117\|Ga0214208_1018809	Not Available	618	Open in IMG/M
3300021122\|Ga0214195_1020984	Not Available	700	Open in IMG/M
3300021123\|Ga0214212_1011096	Not Available	814	Open in IMG/M
3300021125\|Ga0214211_1016255	Not Available	724	Open in IMG/M
3300021132\|Ga0214196_1052409	Not Available	523	Open in IMG/M
3300021142\|Ga0214192_1116044	Not Available	716	Open in IMG/M
3300021142\|Ga0214192_1118080	Not Available	707	Open in IMG/M
3300021142\|Ga0214192_1119036	Not Available	703	Open in IMG/M
3300021142\|Ga0214192_1119036	Not Available	703	Open in IMG/M
3300021142\|Ga0214192_1165682	Not Available	552	Open in IMG/M
3300022555\|Ga0212088_10556514	Not Available	720	Open in IMG/M
3300022555\|Ga0212088_10556514	Not Available	720	Open in IMG/M
3300022555\|Ga0212088_10557514	Not Available	719	Open in IMG/M
3300022555\|Ga0212088_10718122	Not Available	591	Open in IMG/M
3300022555\|Ga0212088_10743749	Not Available	575	Open in IMG/M
3300025316\|Ga0209697_10269161	Not Available	908	Open in IMG/M
3300025316\|Ga0209697_10348279	Not Available	742	Open in IMG/M
3300025316\|Ga0209697_10348279	Not Available	742	Open in IMG/M
3300025316\|Ga0209697_10504753	Not Available	555	Open in IMG/M
3300025316\|Ga0209697_10515309	Not Available	546	Open in IMG/M
3300025355\|Ga0208254_1014126	Not Available	541	Open in IMG/M
3300025369\|Ga0208382_1029054	Not Available	699	Open in IMG/M
3300025396\|Ga0208874_1040267	Not Available	678	Open in IMG/M
3300025398\|Ga0208251_1072786	Not Available	516	Open in IMG/M
3300025400\|Ga0208387_1064918	Not Available	549	Open in IMG/M
3300025411\|Ga0208865_1068520	Not Available	528	Open in IMG/M
3300025413\|Ga0208614_1038729	Not Available	727	Open in IMG/M
3300025418\|Ga0208253_1038278	Not Available	858	Open in IMG/M
3300025418\|Ga0208253_1049354	Not Available	718	Open in IMG/M
3300025437\|Ga0208742_1043867	Not Available	750	Open in IMG/M
3300025455\|Ga0208376_1067123	Not Available	699	Open in IMG/M
3300025487\|Ga0208105_1055996	Not Available	691	Open in IMG/M
3300025578\|Ga0208864_1092719	Not Available	719	Open in IMG/M
3300025578\|Ga0208864_1092719	Not Available	719	Open in IMG/M
3300025578\|Ga0208864_1142974	Not Available	532	Open in IMG/M
3300025779\|Ga0208869_1028931	Not Available	692	Open in IMG/M
3300025779\|Ga0208869_1038911	Not Available	564	Open in IMG/M
3300025782\|Ga0208867_1036729	Not Available	706	Open in IMG/M
3300031759\|Ga0316219_1200807	Not Available	715	Open in IMG/M
3300031759\|Ga0316219_1200807	Not Available	715	Open in IMG/M
3300031759\|Ga0316219_1210591	Not Available	693	Open in IMG/M
3300031884\|Ga0316220_1288668	Not Available	538	Open in IMG/M
3300031884\|Ga0316220_1315239	Not Available	506	Open in IMG/M
3300032665\|Ga0316221_1157159	Not Available	784	Open in IMG/M
3300032676\|Ga0316229_1300036	Not Available	588	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	73.91%
Lake	Environmental → Aquatic → Freshwater → Lake	26.09%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	47.83%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	26.09%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	13.77%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	12.32%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	47.83%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	15.22%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	13.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	12.32%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.42%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003793	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Jun08	Environmental	Open in IMG/M
3300003805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08	Environmental	Open in IMG/M
3300003813	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jun09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300003827	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH29Jun09	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004771	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M	Environmental	Open in IMG/M
3300004772	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006101	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006110	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Jun09	Environmental	Open in IMG/M
3300006111	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul08	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006114	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09	Environmental	Open in IMG/M
3300006115	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul09	Environmental	Open in IMG/M
3300006116	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006126	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH01Aug08	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300012698	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES071 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012701	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES061 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013094	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES058 metaG	Environmental	Open in IMG/M
3300016678	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES102 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020685	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020689	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 epilimnion	Environmental	Open in IMG/M
3300020694	Freshwater microbial communities from Trout Bog Lake, WI - 09SEP2008 epilimnion	Environmental	Open in IMG/M
3300020702	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020707	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020712	Freshwater microbial communities from Trout Bog Lake, WI - 03AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020719	Freshwater microbial communities from Trout Bog Lake, WI - 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300020724	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 hypolimnion	Environmental	Open in IMG/M
3300020726	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 hypolimnion	Environmental	Open in IMG/M
3300020728	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300020735	Freshwater microbial communities from Trout Bog Lake, WI - 25JUL2007 hypolimnion	Environmental	Open in IMG/M
3300021115	Freshwater microbial communities from Trout Bog Lake, WI - 31JUL2007 epilimnion	Environmental	Open in IMG/M
3300021117	Freshwater microbial communities from Trout Bog Lake, WI - 21JUL2009 epilimnion	Environmental	Open in IMG/M
3300021122	Freshwater microbial communities from Trout Bog Lake, WI - 19AUG2008 epilimnion	Environmental	Open in IMG/M
3300021123	Freshwater microbial communities from Trout Bog Lake, WI - 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021125	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion	Environmental	Open in IMG/M
3300021132	Freshwater microbial communities from Trout Bog Lake, WI - 25AUG2008 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025316	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG (SPAdes)	Environmental	Open in IMG/M
3300025355	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025398	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE15Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025400	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025411	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025437	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025455	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA2.5M (SPAdes)	Environmental	Open in IMG/M
3300025487	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025578	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0.5M (SPAdes)	Environmental	Open in IMG/M
3300025779	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025782	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
G310J44882_100879441	3300002933	Freshwater	LGEYMQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEP
Ga0007850_10108221	3300003783	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007835_10070652	3300003789	Freshwater	MQQKKVGWEVIFLELGFAGSGARKPRREFEGSTLEPFFHVVLR
Ga0007847_1045171	3300003793	Freshwater	AQQKQVGWEVIFSELGFAGSGARKPRRELEGSALDFFCSLF*
Ga0007847_1099423	3300003793	Freshwater	KKVGWEVIFSELGFAGSGARKPRREFKGSALEPFFHVFLRLSRALIV*
Ga0007838_10063821	3300003805	Freshwater	MQQKKVDWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007838_10080242	3300003805	Freshwater	MQQKKVGWEVIFAELGFAGSGARKPRREFEGSALEPFFHVFLSLNVVFIV*
Ga0007879_10057284	3300003813	Freshwater	YTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVF*
Ga0007856_10151831	3300003815	Freshwater	QQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007875_10232752	3300003823	Freshwater	FSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007880_10150691	3300003827	Freshwater	VIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007880_10150692	3300003827	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNG
Ga0007804_11479861	3300004770	Freshwater	MHQKKVGWEVIFSGLGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFI
Ga0007804_11492221	3300004770	Freshwater	KKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007797_11149711	3300004771	Freshwater	VGWEVIFSELGFAGSGARKPRREFEGSALEPFFNVFLRLSRALIV*
Ga0007791_101414663	3300004772	Freshwater	LGEYMQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSGLKLCSYTTT*
Ga0007791_101480471	3300004772	Freshwater	QQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVF*
Ga0007791_101825071	3300004772	Freshwater	KVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVFLRLNGASIV*
Ga0007791_101870611	3300004772	Freshwater	LGKYTQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPF
Ga0007794_101531832	3300004774	Freshwater	YAQQKQVGWEVIFSELGFAGSGARKPRRELEGSALDFFCSLF*
Ga0007827_100808581	3300004777	Freshwater	KVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVVLRLNGVLNV*
Ga0007827_100808582	3300004777	Freshwater	MQQKKVGWEVIFLELGFAGSGARKPRRDFEGSALEPFFHVVLRLNGVLNV*
Ga0007827_101371841	3300004777	Freshwater	LENYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALEP
Ga0007796_101963922	3300004804	Freshwater	MQQKKVGWEVIFLELGLARSGARKPRREFEGSALEPFFHVFLRLNGALI
Ga0007796_102334371	3300004804	Freshwater	MQQKKVGWEVIFSELGFAGSGACKPWREFEGSALEPFFHVFQSFMGL*
Ga0007809_101572872	3300004807	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNG
Ga0007881_11542621	3300006072	Freshwater	MQQKKVGWEVIFAELGFAGSGARKPRREFEGSALEPFFHVFLS
Ga0007810_10535112	3300006101	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFKGSALEPFFHVFLRVNGALIV*
Ga0007810_10733631	3300006101	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPF
Ga0007810_10733633	3300006101	Freshwater	IFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSRALIV*
Ga0007813_10516941	3300006103	Freshwater	QKKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVFLRLNGALIV*
Ga0007813_10690702	3300006103	Freshwater	EVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV*
Ga0007813_11000732	3300006103	Freshwater	LENYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALE
Ga0007819_10954721	3300006105	Freshwater	GFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV*
Ga0007819_11189362	3300006105	Freshwater	MHQKKVGWEVIFSGLGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007871_10621841	3300006110	Freshwater	KQVGWEVIFSELGFAGSGARKPRRELEGSALDFFCSLF*
Ga0007848_10455671	3300006111	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLR
Ga0007857_10610861	3300006112	Freshwater	KVGWEVIFAELGFAGSGARKPRREFEGSALEPFFHVFLSLNVVFIV*
Ga0007857_10610862	3300006112	Freshwater	MQQKKVGWEVIFAELGFAGSGARKPRREFEGSALEPFFHVFL
Ga0007815_10710772	3300006114	Freshwater	VGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNRVFIV*
Ga0007815_11169751	3300006114	Freshwater	LGKYVQQKKVGWEVIFSELGFAGSGARKPRREFEGSALE
Ga0007816_10857083	3300006115	Freshwater	SELGFAGSGARKPRREFEGSALEPFFHVFLRLGRAFFV*
Ga0007807_10879081	3300006116	Freshwater	LGNYTQQKNVGWEVIFSELGLAGSGARKPRREFEGSALEPF
Ga0007824_10966531	3300006121	Freshwater	MLLGDYAQQKQVGWEVIFSEHGFAGSRAHKLLRELMGIALAFFAACSEA*
Ga0007824_10998731	3300006121	Freshwater	LGEYIQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHV
Ga0007852_10861731	3300006123	Freshwater	VQQKKIGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFL
Ga0007852_10861733	3300006123	Freshwater	VGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSRALIV*
Ga0007855_10801732	3300006126	Freshwater	SELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV*
Ga0007855_10835721	3300006126	Freshwater	LGDYAQQKQVGWEVIFSELGFAGSGARKPRQELEGSALD
Ga0073936_104276171	3300009175	Freshwater Lake Hypolimnion	MQQKKVGWEVIFSELGFTGSGRVSPNGSSRAAPALEPFFHVFLGLSIRRAFIV*
Ga0073936_105453031	3300009175	Freshwater Lake Hypolimnion	YYTLGEYMQQKKVGCEVIFSELGFTGSGAHKPRREFEGSTLEPFFQVVLRLNRVLNV*
Ga0073936_105602501	3300009175	Freshwater Lake Hypolimnion	MYTCSKKKVGWEVIFSELGFAGSGARKPCREFEGSALEPFFHVVLRLGVPT*
Ga0073936_105611251	3300009175	Freshwater Lake Hypolimnion	MTLLGKYMQQKKVGWEVNFSELGFAGSGACKLQQALKASALEPFFHVDLRLSGALIV*
Ga0073936_105627392	3300009175	Freshwater Lake Hypolimnion	WEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNGA*
Ga0073936_105671601	3300009175	Freshwater Lake Hypolimnion	MCSKKKVGWEVILSELGFAGSRACKPRWEFKGSALKPFFHVFLRLNGASIA*
Ga0073936_106556692	3300009175	Freshwater Lake Hypolimnion	MQQKKVGWGVIFSELGFAGSGARKPQWVLERSALKQFFHVVLRLNGALIV*
Ga0073936_106797181	3300009175	Freshwater Lake Hypolimnion	LGEYMQQKKVGWEVIFAELGFAGSGARKPRREFEGSALKPFFHVFLSLNVVFIV*
Ga0073936_106926191	3300009175	Freshwater Lake Hypolimnion	MHQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRVNGALIV*
Ga0073936_107090821	3300009175	Freshwater Lake Hypolimnion	LGEYKQQKKVGWEVIFSELGFAGFGGRKPWWELKG
Ga0073936_107555061	3300009175	Freshwater Lake Hypolimnion	VIFSELGLTGSGAHKPQPEFEGSALEPCFHVFLRLKLNGASIV*
Ga0114951_102014521	3300009502	Freshwater	KVHTAKKGWLGGHIFSELGFTGYGARKPQREFKGSYSTLKPFFHVFLRLNGASIV*
Ga0114964_103871172	3300010157	Freshwater Lake	FSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV*
Ga0157570_10935482	3300012698	Freshwater	MQHKKVGWEVIFSGLGLAGSGVRNPWREFEGSTLEPFFHVFL
Ga0157562_11588131	3300012701	Freshwater	YAQQKQVGWEVIFSELGFAGSGARKPRWELEGSALNFFAACS*
Ga0164296_11281311	3300013093	Freshwater	MKKLVQFYYTFGEVHAAKKVGWEVIFPELGFAGSLARKPWREFEGSALKPFFHVFLRLNGASIV*
Ga0164296_12216231	3300013093	Freshwater	MQQKKVGWEAIFSELEFAAAGSGAREPRREFEGSALEPFFHVFLRLSMAFIV*
Ga0164296_12337081	3300013093	Freshwater	IFSDPGFAETGACKPQREIEGSTLKPFFYVVVRLNGALIVYTCS*
Ga0164296_13386612	3300013093	Freshwater	MVGWEVIFSELPFAGSRAHKPQQEFKGSALELFFHVVLRLNWALIV*
Ga0164297_101822631	3300013094	Freshwater	LGFAGSGARKPRWDFEGNALQPFFHVILRLNGVLNV*
Ga0164297_102326371	3300013094	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPGREFEGSALEPFVRVFSEAW*
Ga0164297_102331171	3300013094	Freshwater	KKVDWEVIFSELGYVYAGSRVCKPQWEFQGSALEPFFHAVLRLNGALIMS*
Ga0164297_102441971	3300013094	Freshwater	KKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVFLRHNGALIV*
Ga0164297_103693191	3300013094	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALE
Ga0164297_103851441	3300013094	Freshwater	VTLLHFGGYMQQKKVGWEVIFSELGFAGSGAPKPRWEFKGSTLEPFFHIVLRLNVALIM*
Ga0180045_1180601	3300016678	Freshwater	MQHKKVGWEVIFSGLGLAGSGAHKPWREFEGSTLEPFFHVF
Ga0214256_1180221	3300020685	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSL
Ga0214194_1222121	3300020686	Freshwater	LGNYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVFLRLNGALI
Ga0214210_10141682	3300020689	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFL
Ga0214197_10166651	3300020694	Freshwater	GEVHAAKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV
Ga0214197_10167711	3300020694	Freshwater	SELGFAGSGARKPRREFEGSALEPFFHVFLRLSRALIV
Ga0214218_10069081	3300020702	Freshwater	VIFSELGLAGSGARKPRREFEGSALEPFFHVFLSLNGVFIVS
Ga0214238_10404151	3300020707	Freshwater	CNFITFLGKYMQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0214198_10263081	3300020710	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFF
Ga0214198_10466992	3300020710	Freshwater	LGEYIQQKKVGWEVIFSELGFAGSGARKPRREFEGSA
Ga0214255_10259332	3300020712	Freshwater	KYAQQKQVGWEVIFSELGFAGSGARKPRRELEGSALDFFCSLF
Ga0214257_10270861	3300020719	Freshwater	LGKYIQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFLYVFLSLNGVFIVQ
Ga0214244_10355671	3300020724	Freshwater	QQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNGALIV
Ga0214220_10346791	3300020726	Freshwater	ELGFAGSGARKPRREFEGSALEPFFHVFLRLGRAFFV
Ga0214220_10346792	3300020726	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVF
Ga0214202_10359762	3300020728	Freshwater	VIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0214172_10416272	3300020733	Freshwater	IFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSRALIV
Ga0214219_10485791	3300020735	Freshwater	FSELGFAGSGARKPRREFEGSALEPFFHVFLRLGRAFFV
Ga0214174_1187711	3300021115	Freshwater	LGKYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVFLRLNGALI
Ga0214208_10188091	3300021117	Freshwater	FSELGFAGSRVRKPQREFEGSALEPFFHVFLRLSRALIV
Ga0214195_10209842	3300021122	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEP
Ga0214212_10110961	3300021123	Freshwater	FLELGLAGSGARKPRREFEGSALEPFFHVFLRLNGALIV
Ga0214211_10162552	3300021125	Freshwater	FITLLGKYVQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSRVLIV
Ga0214196_10524092	3300021132	Freshwater	GSTYSKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV
Ga0214192_11160441	3300021142	Freshwater	YMQQKKVGWEVIFLELGLAGSGARKPRREFEGSALEPFFHVFLRLNGALIV
Ga0214192_11180801	3300021142	Freshwater	QQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNGAFIV
Ga0214192_11190361	3300021142	Freshwater	QKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSRALIV
Ga0214192_11190362	3300021142	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALELFF
Ga0214192_11656822	3300021142	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFXGLVGLLLCS
Ga0212088_105565141	3300022555	Freshwater Lake Hypolimnion	YVQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVF
Ga0212088_105565142	3300022555	Freshwater Lake Hypolimnion	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHV
Ga0212088_105575141	3300022555	Freshwater Lake Hypolimnion	WEVIFSELGFAGSGARKPRREFEGSALEPFFHVFQSFMGL
Ga0212088_107181221	3300022555	Freshwater Lake Hypolimnion	MQQKKVDWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFL
Ga0212088_107437492	3300022555	Freshwater Lake Hypolimnion	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLGLNGVFI
Ga0209697_102691611	3300025316	Freshwater Lake Hypolimnion	CNFITLLGKYTQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNGVLIV
Ga0209697_103482791	3300025316	Freshwater Lake Hypolimnion	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSGLKLCS
Ga0209697_103482792	3300025316	Freshwater Lake Hypolimnion	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSGLKL
Ga0209697_105047532	3300025316	Freshwater Lake Hypolimnion	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHV
Ga0209697_105153092	3300025316	Freshwater Lake Hypolimnion	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPF
Ga0208254_10141261	3300025355	Freshwater	LGKYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSTLEP
Ga0208382_10290541	3300025369	Freshwater	QQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV
Ga0208874_10402671	3300025396	Freshwater	EVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV
Ga0208251_10727861	3300025398	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPQRKFEGSALEPFFHVFLRLSRALIV
Ga0208387_10649181	3300025400	Freshwater	SKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNQALIV
Ga0208865_10685201	3300025411	Freshwater	GKYMQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0208614_10387292	3300025413	Freshwater	EVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0208253_10382781	3300025418	Freshwater	LENYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSAFEPFFH
Ga0208253_10493541	3300025418	Freshwater	YMQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0208742_10438671	3300025437	Freshwater	FLMQQKKVGWEVSFSELGFAGSGVRKPRREFEGSALEPFFHVFLRLNQALIV
Ga0208376_10671231	3300025455	Freshwater	KYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVF
Ga0208105_10559962	3300025487	Freshwater	IFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0208864_10927191	3300025578	Freshwater	MQQKKVDWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFI
Ga0208864_10927192	3300025578	Freshwater	WEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFIV
Ga0208864_11429741	3300025578	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLSLNGVFI
Ga0208869_10289311	3300025779	Freshwater	AQQKQVGWEVIFSELGFAGSGARKPRRELEGSALDFFCSLF
Ga0208869_10389111	3300025779	Freshwater	MQQKKVGWEVIFAELGFAGSGARKPRREFEGSALEPFFHVFLSLN
Ga0208867_10367292	3300025782	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEP
Ga0316219_12008071	3300031759	Freshwater	KKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLSRALIV
Ga0316219_12008072	3300031759	Freshwater	VQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFHVFL
Ga0316219_12105912	3300031759	Freshwater	WEVIFSELGFAGSGARKPRREFEGSALEPFFHVFLRLNGAFIV
Ga0316220_12886681	3300031884	Freshwater	MQQKKVGWEVIFSELGFAGSGARKPRREFEGSALEPFFYVFLSLNGVFIVQLNYHIKPV
Ga0316220_13152391	3300031884	Freshwater	MQQKKVGWEVIFSELGFAGSRARKPRREFEGSALEPFFHV
Ga0316221_11571591	3300032665	Freshwater	LENYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSA
Ga0316229_13000361	3300032676	Freshwater	LGKYTQQKKVGWEVIFSELGLAGSGARKPRREFEGSALEPFFHVF

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055380

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences