Metagenome Family F055325

Basic Information
Family ID	F055325
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	71 residues
Representative Sequence	VESGSCKTPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKSICSSLTLSIVSKTKSMDNKIMSVAFKTFVRSDRST
Number of Associated Samples	3
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	3
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root (97.826 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.38% β-sheet: 0.00% Coil/Unstructured: 59.62%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF13963	Transpos_assoc	0.72

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Roots	Host-Associated → Plants → Roots	97.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.17%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified	97.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.17%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	97.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.17%

Habitat	Taxonomy	Distribution
Root	Host-Associated → Plants → Roots → Unclassified → Unclassified → Root	97.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.17%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300014486	Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0182004_100205566	3300014486	Root	MFLKICPAHRDKAEIKCMGPVGGKHKQNQKYIYSSLSLSIGSKIKLMDDKFMSVAFKTFVRSDCST*
Ga0182004_100348103	3300014486	Root	VESGSCKTPSYYAQSVPAHRDKAEIKCMGSVGEKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFKTFVGSNRST*
Ga0182004_100357172	3300014486	Root	VESGSCKTPSYYAQTVPAHRDKAEIKCMGSVGEKHQQNQKCICCSLTISMMSKTKLMDNKIISVAFKKFVRLDCST*
Ga0182004_100517072	3300014486	Root	MESGSCKTPSYFARSVPAHRDKVEIKCMGSVGGKHQQNQKCICSSLTSSIVSKTKLMDNNIMSVAFKAFVRSARST*
Ga0182004_100539901	3300014486	Root	VESRSCITPSVFARSVPAHEDKVEIKCMGPIGGKYQQNQKYIYSSLSLSIGSKTKLIDNKIMSVTFKTFVRSHRST*
Ga0182004_100676181	3300014486	Root	VESESCKTPSGFARSVPAHRDKAEIKCIGPAGGKDQQNQKCVCSSLTLSIVSKTKVMDNKIMSVEFKIFVGSDRSILMER*
Ga0182004_100816762	3300014486	Root	VESGSCKTPPYFARSVPAHRYKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMADKFMSVALIIFVRLDRFNLMER*
Ga0182004_100835681	3300014486	Root	VESGSCKTPSGLARSVPAHRDKAEIKCMGPAGEKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFKIFVR
Ga0182004_100889002	3300014486	Root	VESRSCETPSSFAQSVPAHRDKAEIKCMGPDGEKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVVFETFVRSDCSTQWEDNLSIFMFCLYLPK
Ga0182004_100901041	3300014486	Root	VESGSCKTPSGFAQSIPAHRDKAEIKCMGPVGEKHQQNQIVSKTKLMDNKIMSVAFKTFVRLDRST*
Ga0182004_100904162	3300014486	Root	VESVSCKTPPCFAPSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLSLSIVSKTKLMDDKFMSVALITFVRSDSST*
Ga0182004_100945622	3300014486	Root	EIKCMGPVGEKHQQNQKCICFSLTLSIVSKTKLMDNKIISVAFKTFVRSDRLT*
Ga0182004_100959181	3300014486	Root	SVFAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTNLMDNKIMSVAFKTFVRTR*
Ga0182004_100974081	3300014486	Root	VEFGSCKTPSGFARSVPAHRDKAEIKCMGPVGEKHQRNQKCICSSLTLSIVSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_100974131	3300014486	Root	MRFEKSSMFLKMCPAHRDKTEIKCMGPVGGKHQQNQKYIYSSLSLSIGSKTNLMGDKFMSVAFKTF
Ga0182004_101006862	3300014486	Root	VESGSCKTPSCFARSVPAHRDKAEIKCMGPVGEKHQHNQKCICSSLTLNIESKTKLIDNKIMSVAFKTFVTSDRST*
Ga0182004_101029322	3300014486	Root	VESGSCKTPSARSVPAHRDKAEIKCMGPVGEKHQQNKKCICSSLTLSIVSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101072331	3300014486	Root	VESGSCKTPPCFAPSVPAHRDKAEIKCMGLVGGKHQQNQKYIYYSLSLSIGSKSKLMDNKIMSVAFKTFVRSDCSTLWKDNLSTFIFFYISSKD*
Ga0182004_101083491	3300014486	Root	VESGSCKTPSYYARSVPVHRDKAEIKCMGSVGEKHQQDQKCICCSLTLNIVSKTKLMGDKFMSVAFKTFVRSDCLT*
Ga0182004_101138331	3300014486	Root	MCPAHRDKVEIKCVGPVGGKHQQNQKCICSSLTLSIVSKTNLMDNKIMSVVFKT
Ga0182004_101154691	3300014486	Root	VESGSCKITPYFARSVPIHRDKAEIKCMGPVGGKHQQNQKCICSPLTLSIVSKTKLMDDKFMSVALITFVRSDRFNLMERSSIYVYDFFFISLKG*
Ga0182004_101170671	3300014486	Root	VESGSCKTPSYATRSAPANRDKAEIKCMGPVGGKDQQNQNCICSSLTLSIVSKTKSMDNKIMCVAFKTFVRSDHSTLSK*
Ga0182004_101171891	3300014486	Root	VLVDPGSSLGGVWSCKTPSYFARSVPTHRDKAEIKCMGPVGGNHQENQKCICSSLTLSIVSKTKLMDNKIMSVAFKAFVRSDRST*
Ga0182004_101181501	3300014486	Root	VESGSYKTPPCFAPSVPAHLDKAEIKCMGPVGGKHQHNQKCICSSLTLSIVSKTKLMDDKFMSVVLITFVRSDRSTLW
Ga0182004_101243921	3300014486	Root	MCPAHRDKAEIKCMGPVGGKHQQNQKYIYSSLSLSIGSKTRLMGDRFMSVTFKTFVRSDRSTL*
Ga0182004_101254752	3300014486	Root	VESGSCKTPSYFARSVPAHRAKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNE
Ga0182004_101255423	3300014486	Root	VPAHRDKVEIKCMGSVGGKHQQNQKCICSSLTLSIVSKTILMDNKIMSVVFKTFVRSDRST*
Ga0182004_101272231	3300014486	Root	IHRDKAEIKCMGPVGGKHQQNQKYIYSSLTLSIVSKTKLMENKIMSVVFKTFVRSDGST*
Ga0182004_101304921	3300014486	Root	VQSGSCKTPSYFARSEPTHKDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNK
Ga0182004_101324561	3300014486	Root	AHRDKAEIKCMGPVGGKHEQNQKCICSSLTLSIVSKTKLMDDKLMSVVLIIFVRSDRST*
Ga0182004_101336611	3300014486	Root	SGFARSVPAHRDKAEIKCMGPVGEKHQQNQKCICFSLTLSIVSKTKLIDNKIISVAFKKFVRSDRLT*
Ga0182004_101351211	3300014486	Root	VESGSCKTPSGFARSVPAYRGKAEIKCMGPVGEKHQQNQKCIGSSLTLNIVSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101357142	3300014486	Root	VESESCKTPLGFARSVPAHRDKAETKCMGPVGEKQQQNQKYICSSLILSIVRKTKLMDNKIIRVAFKTFVRSDRST*
Ga0182004_101366751	3300014486	Root	VESGSCNTPPYFAGSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTFSIVSKTKLMDNKIMS
Ga0182004_101379621	3300014486	Root	VESESCKTPSYATRSVPANRDKAEIKCMGPFGGKHQQNQNCICSSLTLSIVSKTKLMDNKIMSVAFKTFVR
Ga0182004_101385091	3300014486	Root	VESKSSKTPPCFASSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIESKTNLMDNKIMSVVFKIFVRSDRST*
Ga0182004_101420101	3300014486	Root	AHRDKAEIKCMGPVGGKHQQNQKCICSSLTISIVSKTKLMGDKFMSVAFKIFVRSDRSTLWKDNLSMYMSFS*
Ga0182004_101454011	3300014486	Root	VESRSCKTPSYFAQSVPAHRDKTEIKCMGPVGGKHQQNQKCIGSSLTLSIVSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101459952	3300014486	Root	VESGSCKTPSYFARSIPAHRDKAEIKCMGPVGGKHQQNQKSIYSSLILSIVSKTKLMDNKIMSVAFKAFVR*
Ga0182004_101476661	3300014486	Root	MFLKMCLAHRDKAEIKCIGPVGGEHQQNQKCICSSLTLSIVKKTKVMDNKIMSVVFKYLSD*
Ga0182004_101479321	3300014486	Root	VESGSCKTPPCFARSIPAHRDKAEIKCMGPVGGKHQQNQKCIFSSLTLSIVSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101487061	3300014486	Root	RSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101490631	3300014486	Root	VESGSCKTPSYFARSVPAHKDKAEIKCMGPIGGTHQQNQMCICSSLTLSIGSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101522201	3300014486	Root	AHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVNKTKLIDVKFMSVALITFVRSDCFNLMER*
Ga0182004_101525312	3300014486	Root	VESGSCETPPCFVPSVPAHRDKAEIKCMGPVGGKHQQNRKYIYSSLSLSIGSKAKLMDDKFMSVALITFVRSDCSTLWKDNLSMYMSFS*
Ga0182004_101606481	3300014486	Root	MCPAHRDKAEIKCMGPVGGKHQQNQKHIYSYLSLSIGSKIKLMGDKFMSVAFKTIVRSDRSTLWKDNLSMY
Ga0182004_101614441	3300014486	Root	MFLKMCPAHRDKVEIKCMGPVGGIHQQNQKYIYSSLSLSIGSKAKLMGDKFMSVAFKTIVRSYRST*
Ga0182004_101624901	3300014486	Root	MFLKMCPAYRDKAEIKCMGPVGDQQNQKYIYSSLSLSVGSKTKLMGDKFMSVVFKTFVRSDRSTLW
Ga0182004_101642261	3300014486	Root	VLHLVESGSCKSPSYFARRVPAHRDKVEIKCMGPVGGKHQQHQKCICSSLTSSIVSKTKLMDNKIMSVVFNICQIRLLDLMER*
Ga0182004_101646191	3300014486	Root	VESGSCKTSSYFARSVPAHRDKAEIKCMGPAGGKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVIFKTFVTSDHST*
Ga0182004_101682251	3300014486	Root	LVESESYKTPPCFAQSVPAHRDKAEIKCMGPGGGKHQQNLKCICSSLTLSIVSKTKLMDEKFMSVALITFVR
Ga0182004_101692522	3300014486	Root	MESGSCKTPPYFARSISAHRAKAEIKGMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFK
Ga0182004_101717001	3300014486	Root	MCPAHRDKAEIKCMGPVGGKHQQNQKYIYSSLSLSIGSKTNLMDNKIMSVVFKTIVRSDRST*
Ga0182004_101717751	3300014486	Root	MEFGSCKTPSGFARSVPAYRDKAEIKCMGPVGEKQQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFKTFVRSDRST
Ga0182004_101737961	3300014486	Root	VESGSCKTPPCFPPSVPAHRDKAEIKCMGPVGEKHQQNQKCICSSLTLSIVSKTKLMDDKFMSVVLITFVRSDRSTLWRDNLSMYMS
Ga0182004_101739551	3300014486	Root	SCKSPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICFSLTLSIVSKTKLMDNKIMSITFKTFVRLDCSTLWKDNIYIYVLFISSKD*
Ga0182004_101745311	3300014486	Root	PAHRDKVEIKCMGPVGGKHQQNLKCICSSLTLSIVSKTKLMNDKFMSVAFKTFAGSGHST
Ga0182004_101804161	3300014486	Root	VYAAHRDKAEIKCMGPVGGKHQQNQKCICSFLTLSIVSKTKLMDDKIMSVAFKIFVTSDHSTLWKDNLSR*
Ga0182004_101818091	3300014486	Root	VESESYKTPPYFARSVPAHRDMAEIKCMDPVGRKHQQNQKCICASLTLSIVSKAKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_101842111	3300014486	Root	VHRDKAEIKCMGPVGGKHQQNQKYIYSSLSLSIGSETKLMVDKFMSVAFKTFVRSGGST*
Ga0182004_101917461	3300014486	Root	VESGSCKSPSYFARSVPAHRDKTEIKCMGPVGGKHQENQKCICSSLSLSIVSKTQLMDNKIMSVVFNICQIRLLNLMER*
Ga0182004_101918931	3300014486	Root	VESGSCKTPPCFARSVPAHREKAEIKCMGPVGGKHQQNQKCICSSLTLSMVSKTKLMDDKFM
Ga0182004_101933101	3300014486	Root	VESGSCKTLSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLSLSIVSKTKLMDNKIMSVAFKTFVRSDHSTL*
Ga0182004_101940921	3300014486	Root	VGVEKSPVFLKMCPAHRDKTEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTNLMDNKIMS
Ga0182004_101941372	3300014486	Root	LVDSESYKTPPCFARSVPTHRDKAEIKCMSSVGGEHQQNLKCICSSLTLSIVSKTKLMDEKFMSVALITFV
Ga0182004_101951901	3300014486	Root	VESGSCKTPSDFARSVPAHRDKAEIKCMGPAGEKHQQNQKCICSSLTLNIVSKTKLMDNKIMSVAFKTFVRSD
Ga0182004_101971901	3300014486	Root	VLVDPRPSLGRVWELKNPPFFSKCVPAHRDKEEIKCMGPIGGKHQQNQKYIYPSLSLSIESKTKLMGDKFMSVAFKTFVRSDRSTL*
Ga0182004_102019002	3300014486	Root	VESGSCKTPLGFARSVPAHRDKAEIKCMGPVAEKRQHNQKCICSSLTLSIVSKTKLMDNKIMSVAFKTIVRSDCST*
Ga0182004_102046661	3300014486	Root	VESRNCKTPPCFARSVPAHSDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNK
Ga0182004_102047581	3300014486	Root	LVESESYKTPPCFAQSVLAHRDKAEIKCMGPVRGKHQQNLKCICSSLTLSIVSKTKLMDEKFMSVALITFVRS
Ga0182004_102101262	3300014486	Root	VEFGSCKTPSGFARSVPAHRDKAEIKCMGPVGEKHQQNKKCICSSLTLSIMSKIKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_102104861	3300014486	Root	HRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNQIMSVAFKAFVRSDHST*
Ga0182004_102113462	3300014486	Root	KSPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTSSIVSKTKLMDNKIMSVVFNICQIRLFNLMER*
Ga0182004_102130642	3300014486	Root	VESGSCKTHSYFARSVPAHRDRVEIKCMGPVGGKHQQNQKCVCSSLTLSIVSKTKLMDNKIMSVAFKTFVRSDR*
Ga0182004_102145501	3300014486	Root	VESRSCKTHRDKAEIKCMGPVGGKHQQNQKCFYSSLSLSIGSKSKLMGDKFMSVAF
Ga0182004_102156931	3300014486	Root	LVESESYKTPPCFAQSVTAHRDKAEIKCMGPVGGKHQQNLKCICSSLTLRIVSKTKLMDEKFMSVALITFVRSDR*
Ga0182004_102168962	3300014486	Root	FARSVPAHRDKAEIKCMGPIGEKHQQNQKCICSSLNLSIVSKTKLMDNKIMSVAFKTFVRSDRSS*
Ga0182004_102183701	3300014486	Root	CKTPPCFARSVPAHRDKAEIKCMGPVGGKHQQNQKCIYSSLTLSIVSKTKLMDNKIMSVAFKTFLRSDRST*
Ga0182004_102184302	3300014486	Root	VESGSCKTPSYFAPSLPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFKTLVRSDCST*
Ga0182004_102185112	3300014486	Root	VEFGSYKTPLGFARSVPAHRDKAEIKCMGPVGGKRQQNQKCICSSLTLSIVSKTKLTDNKIMSVTFKTFVRLDRST*
Ga0182004_102189751	3300014486	Root	VESGSCKTPPCFALSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMVNKIMSVAFKTFVRSDGST*
Ga0182004_102242621	3300014486	Root	SYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSTASKTKLMDNKIMSVACKTFVRSDHST*
Ga0182004_102265181	3300014486	Root	RSVPAHRNKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFKAFVRSDGST*
Ga0182004_102265261	3300014486	Root	VESGSCKTPSYFARSVPTHIDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDNK
Ga0182004_102269652	3300014486	Root	VESRSCKSPSYFAQSVPVHRDKAEIKCMDPVGGKHQQTQKCICSSLTLSIVSKTKLMDDKIMSVVFEAFVRSDRST*
Ga0182004_102297271	3300014486	Root	LEESRSCKTPLGFARSVPAHKDKVEIKCMGTVGEKHQQNQKFICSSPTLSIESKTKLMNNKIMSVAFKHLSD*
Ga0182004_102299551	3300014486	Root	VESGSYKTSPCFARSVPAHRDKAEIKCMGPVGGKHKQNQKCICSSLTLSIVSKTKLMDDKFMSVALIIFVRSDRSTLWKDN
Ga0182004_102303221	3300014486	Root	KTPPCFARSVPAHRDKAEIKCIGPVGGKHQQNQKCICSSLTLSIVSKTKLMNDKFISVAFKTLAGSDRST*
Ga0182004_102303461	3300014486	Root	VESGSCKTPPCFAQSVPAHRDKIEIKCMGPVGGKHQQNQKCICSSITLSIVSKTNLIDNKIMSVVFKTFVKSDRST*
Ga0182004_102309581	3300014486	Root	VLHLVESESYKTPPCFAPSVPAHRDKAEIKCMGPVGGKQQPNQKCIRSSLTLSIVSKTKLIDDKFMSVALITFLTSDRFNLMER*
Ga0182004_102317611	3300014486	Root	VPAHRDKAEIKCMGPVGGKHQQNQKCICSTLTLSIVSKTKLMDNRIMSVAFKIFVRSDRST*
Ga0182004_102320881	3300014486	Root	KSPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTVSIVSKTKLMDNNIMSVTFKTFVRSHRST*
Ga0182004_102333711	3300014486	Root	VLHLVESGSCKSPSYFVRSVPTHRDKVEIKCMGPVGGKHQHNQKCICSSLTLSIVSKTNLMDNKIMSVVFKTFVRSDRST*
Ga0182004_102335151	3300014486	Root	VLHLVESESYKTPPCFARSVPAHRDKAEIKCIGPVGGKHQQNQKCICSSLTLSIVSKTKLMDDKFMSVALITFVRLDRFNLIER*
Ga0182004_102352591	3300014486	Root	ESRSCKSPSYFARSVPAHRDKAEIKCMGPVGGKHQHNQKCMCSSLTLSIGSKTKLMDNKIMSVTFKTFVTSDRST*
Ga0182004_102354802	3300014486	Root	VESGSCKTPPCFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSALTLSIVSKTKLMDTKIMSVAFKTIVRSDRSTLWKDNLSMF
Ga0182004_102354891	3300014486	Root	AHRDKAEIKCMGPVGGKHQQNQKCICSSVTLSIVSKTKLMDNGIISVAFKAFVRSDRST*
Ga0182004_102366151	3300014486	Root	FARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVNKTKLMDNKIMSIAFKTFVRSDRST*
Ga0182004_102369172	3300014486	Root	VESGSYKTPSNFALSVPTHRDKAEIKCMGPVGGKHQQNQKCICSSLALSIVSKTNLMDNKIMSVAFKVFVKSDRST*
Ga0182004_102388611	3300014486	Root	PSYFARSVPAHKDKAEIKCMGPVGGKHQQNQKCICSSLTLRIVSKTKLMDNKIISVIFKTFVRSDHST*
Ga0182004_102390681	3300014486	Root	AHRDKAEIKCMGPVGGKHQQNQKCICSFLTLSIVSKTKLMDNKIMNVVFKTFFRSDGST*
Ga0182004_102399831	3300014486	Root	VESGSCKTTSGFARSVPAHRDKAEIKWMGPVGEKHQQNQKCICSSLTLSIVSKTKLMDNKIMSVAFKT
Ga0182004_102436031	3300014486	Root	SCKTPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTTSIVSKTKLMDNKIMSVSIKTFVRSDRST*
Ga0182004_102442071	3300014486	Root	PAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTNLIDNKIMSVVFKIFVRSDRST
Ga0182004_102480931	3300014486	Root	LLESESYKTPLCFAQSVPAHRDKAKIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDEKFMSVALITFVRSDRSTL
Ga0182004_102492701	3300014486	Root	LVESESYKTPPCFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMNDKFMSVALITF
Ga0182004_102519111	3300014486	Root	MESGSCKTSSYFAQSVPTHRDKAEIKCMGPVGGKHQQNQKCICSSLTSSIVSKTKLMDNKIMSVVFNICQ
Ga0182004_102557471	3300014486	Root	SCKTPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCIYSSLSLSIVSKTKLMDNKIMSVTFKTFV*
Ga0182004_102557831	3300014486	Root	LIESESYKTPPCFAQSVPAHRDKAEIKCMGPVGGKHQQNQKYIYSSLSLSIRSKSKLMG
Ga0182004_102568211	3300014486	Root	VESGSCKTPSDFAQSVPAHRDKAEIKCMGPVGEKYQQNQKCICSSLTLNIVSKTKLMDNKIMSVAFKTFVDQIA*
Ga0182004_102594131	3300014486	Root	SGSCKSPSYFARSVPAHRDKVEIKCMGPVGGKHQQNQKCIFFFSKLKHSKQDKVDRIMSVAFETFVRSDGST*
Ga0182004_102594311	3300014486	Root	PSYFAQSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLSLIIVSKTKLMDNKIMSVAFKTFVRSDHST*
Ga0182004_102597231	3300014486	Root	LVESESYKTPPCFGQSVPAHRDKAEIKYMGPVGGKHQQNIKCICSSLTLSIVSKTKLMDEKFMSVALITFVRSDRSTLWK
Ga0182004_102610781	3300014486	Root	YFARSVPTHRDKAEIKCMGPVGGKHQQNQKCICSSLTSSIVSKTKLMDNKIMSVAFNICQIRLLNLMER*
Ga0182004_102624041	3300014486	Root	VLHLVESRSCKTPSYFARSVPAHKDKAEIKCMGPVGGKHQHNQKCICSSLALSIVSKTKLMDNKIMSTTFKTFVRSNRST*
Ga0182004_102640492	3300014486	Root	VESGSCKTPLYFARSVPAHRDKEEIKCMGPVGGKHQQNQKCICSSLALSIVSKTKLMDNKIMSVAFITFVRSDCST*
Ga0182004_102660531	3300014486	Root	VESGSCKTLPYFAQSVPAHRDIVEIKCMGSVGGKHQQNQKCICSSLTSSVVSKTKLMDNKIMSVVFNICQIRLLNLMER*
Ga0182004_102684521	3300014486	Root	LVESESYKTPPYFARSIPTHRDKAEIKRMGPVGGKHQKNQKCICSSLTLSIVSKTKLMDEKFMSVALITFVRSDRPTL
Ga0182004_102700501	3300014486	Root	CVCARSVPAHRDEAEIKCMGPVGGKHQQNQKCICSSLTLSMVSKTKLMDNKIMSVAFKTFVRSDRST*
Ga0182004_102718431	3300014486	Root	VKSGSCKTPPYFARSVPAHRDKAEIKCMCPVGGKHQQNQKCLCSSLTLSIVSKTKLMDNKIMSVAFKAF
Ga0182004_102718891	3300014486	Root	YARSVPAHRDKVEIKCMGPVGGKHQQNQKCICSSLTLSIVRKTKLIMSVAFVRSDGST*
Ga0182004_102729061	3300014486	Root	LVESESYKTPPCFAQTVPAHRDKAEIKCVGPVGGKHQQNQKCICSSLTLSIVSKTKLMDEKFMSVALIT
Ga0182004_102753472	3300014486	Root	PSYFARSVPAHRDKAEIKCMGSVGGKHQQNQKCICSSLTLSVVSKTKLMYNKIMSVAFKTFVRSGCST*
Ga0182004_102760111	3300014486	Root	VLVDLGSSLGSCKTPCFARSVPAHKDKAEIKCIGPVGGKHQQNQKYIYSSLSLSIGSKTTLMGDKFMSVAFKTF
Ga0182004_102796771	3300014486	Root	SVPAHRDKAEIKCMGPVGGTHQQNQKCICSSLTLSIVSKTNLMDNKIMSVAFKTFVRSDRSN*
Ga0182004_102806271	3300014486	Root	SVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTNLIDNKIISVVFKTFVRSDRST*
Ga0182004_102813601	3300014486	Root	RDKAEIKCMGPVGEKHQHNQKCICSSLTLSIVSKTKLMDNNIMSVAFKTFVRSDHST*
Ga0182004_102825481	3300014486	Root	LVESESYKTPPCFAQSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKTKLMDEKFMS
Ga0182004_102828412	3300014486	Root	VESGSCKTPSGFARSVPAHRDKAEIKCMGHVGEKHQQNQKCICSSLTLSIVSKTKLIDNKIMNVAFKTFVRLDHSA*
Ga0182004_102890541	3300014486	Root	SYFARSVPAHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSTLSKTKLMDNKIMSVAFKIFVRSDHST*
Ga0182004_102899522	3300014486	Root	ESGSCKSPSYFTRSVPAHRDKAEIKCMGPVGGKYQQNQKCIHSSLTLSIMSKTQLMDNKIMSVAFKTFVRSDHST*
Ga0182004_102910022	3300014486	Root	VESGSCKTPSYFARSVPAHRDKAEIKCMGPVGGKHQQNQKSICSSLTLSIVSKTKSMDNKIMSVAFKTFVRSDRST*
Ga0182004_102932841	3300014486	Root	RSVPVHRDKAEIKCMGPVGGKHQQNQKCICSSLTLSIVSKKKLMDNKIMRVAFKTFVRSNPST*
Ga0182004_103006531	3300014486	Root	VESGSCKTPSYFAQSVPTHRDKAEMKCMGPVGGKHQQNQKCICSSLTSSIVSKTKLMDNKIMSVVF
Ga0182004_103011071	3300014486	Root	SESYKTPPCFARSVPAHRDKAEIKCMGPVGGKHQQNLKCIYSSLTLSIVSKKKLMDEKS*
Ga0182007_102644681	3300015262	Rhizosphere	ARSVPAHRDKAEIKCMGSVGGKHQQNQKCICSSLTSSIVSKTKLMDNKIMSVVFNICQIRLLNLMER*
Ga0182005_11262111	3300015265	Rhizosphere	VESGSCKTPSYFARRDRAEIKCMGPVGGKHQQNQKCICSSLSLSIVSKTKLMNNKIMSITFKTFVRLDCST
Ga0182005_12372572	3300015265	Rhizosphere	PSYFARSVPAHRDKAEIKCMGSVGGKHQQNQKCICSSLTSSIVSKTKLMDNKIMSVVFNICQIRLLNLMER*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055325

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences