Metagenome / Metatranscriptome Family F055310

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055310
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	55 residues
Representative Sequence	MVGESRAPNVILRMTDHLGVGEGQMYRRSRVTPVEGRALASGVLEKEERSGDWR
Number of Associated Samples	130
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.64 %
% of genes near scaffold ends (potentially truncated)	31.65 %
% of genes from short scaffolds (< 2000 bps)	78.42 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.12

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (15.108 % of family members)
Environment Ontology (ENVO)	Unclassified (29.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.12
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.12
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00078	RVT_1	28.78
PF08388	GIIM	25.18
PF13408	Zn_ribbon_recom	1.44
PF01087	GalP_UDP_transf	0.72
PF04397	LytTR	0.72
PF05580	Peptidase_S55	0.72
PF00702	Hydrolase	0.72
PF01245	Ribosomal_L19	0.72
PF01400	Astacin	0.72
PF01381	HTH_3	0.72
PF07690	MFS_1	0.72
PF01261	AP_endonuc_2	0.72
PF12728	HTH_17	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0335	Ribosomal protein L19	Translation, ribosomal structure and biogenesis [J]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	41.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	41.01 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	41.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	40.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.32 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	39.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.72 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	38.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	38.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.44 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Nitrobacter hamburgensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_94187_len_2215_cov_24_374718	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
2124908028\|beta3_all_NODE_97900_len_2075_cov_8_689638	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
2124908038\|B3_all_c_ConsensusfromContig202083	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
2140918024\|NODE_508999_length_1773_cov_17.930626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter hamburgensis	1823	Open in IMG/M
2140918025\|NODE_253123_length_943_cov_14.342524	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300001396\|JGI20175J14863_1007059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1872	Open in IMG/M
3300001423\|JGI20199J14953_1001949	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300001593\|JGI12635J15846_10197065	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300002069\|JGIcombinedJ21912_10065266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1525	Open in IMG/M
3300002183\|JGI24145J26757_10062114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	848	Open in IMG/M
3300002569\|JGI24136J36422_10025954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1832	Open in IMG/M
3300002569\|JGI24136J36422_10132130	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	656	Open in IMG/M
3300005167\|Ga0066672_10061021	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300005176\|Ga0066679_10105925	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300005187\|Ga0066675_10503842	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005529\|Ga0070741_10155491	All Organisms → cellular organisms → Bacteria	2290	Open in IMG/M
3300005537\|Ga0070730_10097217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2042	Open in IMG/M
3300005576\|Ga0066708_10153388	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005944\|Ga0066788_10082620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	784	Open in IMG/M
3300005949\|Ga0066791_10010812	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300005950\|Ga0066787_10031609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	958	Open in IMG/M
3300005993\|Ga0080027_10067056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1315	Open in IMG/M
3300005993\|Ga0080027_10352441	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	590	Open in IMG/M
3300006055\|Ga0097691_1022666	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300006791\|Ga0066653_10173781	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300006795\|Ga0075520_1074175	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1584	Open in IMG/M
3300006797\|Ga0066659_10791442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	783	Open in IMG/M
3300006852\|Ga0075433_10171696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1929	Open in IMG/M
3300006854\|Ga0075425_100346450	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300007258\|Ga0099793_10158245	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300007265\|Ga0099794_10152329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1174	Open in IMG/M
3300007982\|Ga0102924_1051258	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300009009\|Ga0105105_10741196	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	588	Open in IMG/M
3300009012\|Ga0066710_101745893	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300009029\|Ga0066793_10376826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	816	Open in IMG/M
3300009088\|Ga0099830_11758177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	518	Open in IMG/M
3300009137\|Ga0066709_101893173	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	831	Open in IMG/M
3300009143\|Ga0099792_10638278	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009147\|Ga0114129_10695599	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300009162\|Ga0075423_10252310	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300009524\|Ga0116225_1366284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	641	Open in IMG/M
3300009623\|Ga0116133_1051451	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009628\|Ga0116125_1261424	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300010335\|Ga0134063_10444906	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300010366\|Ga0126379_12458128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	620	Open in IMG/M
3300010376\|Ga0126381_103011286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	669	Open in IMG/M
3300010862\|Ga0126348_1074193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	586	Open in IMG/M
3300010880\|Ga0126350_11556838	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	582	Open in IMG/M
3300011079\|Ga0138569_1172855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	531	Open in IMG/M
3300011120\|Ga0150983_15346462	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300011269\|Ga0137392_11296662	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300011444\|Ga0137463_1044016	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300012202\|Ga0137363_10406256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1135	Open in IMG/M
3300012209\|Ga0137379_10089951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2953	Open in IMG/M
3300012210\|Ga0137378_10126504	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2361	Open in IMG/M
3300012212\|Ga0150985_111434478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	653	Open in IMG/M
3300012683\|Ga0137398_10721652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	693	Open in IMG/M
3300012918\|Ga0137396_10120099	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300012918\|Ga0137396_10136536	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300012929\|Ga0137404_11754710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	577	Open in IMG/M
3300012960\|Ga0164301_10462904	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300012984\|Ga0164309_10952316	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300013297\|Ga0157378_10096266	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300014490\|Ga0182010_10113687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1367	Open in IMG/M
3300014493\|Ga0182016_10583032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	638	Open in IMG/M
3300014494\|Ga0182017_10505952	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300014496\|Ga0182011_10351180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	970	Open in IMG/M
3300014501\|Ga0182024_10390563	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300014502\|Ga0182021_10230023	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300015076\|Ga0167656_1003949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1852	Open in IMG/M
3300015085\|Ga0167632_1004038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2166	Open in IMG/M
3300015357\|Ga0134072_10228669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	659	Open in IMG/M
3300016750\|Ga0181505_10204314	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300017931\|Ga0187877_1154234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	921	Open in IMG/M
3300017988\|Ga0181520_11008672	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	550	Open in IMG/M
3300018035\|Ga0187875_10092943	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300018037\|Ga0187883_10491226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	632	Open in IMG/M
3300018482\|Ga0066669_10259526	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300019788\|Ga0182028_1342131	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300019788\|Ga0182028_1401609	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2526	Open in IMG/M
3300019887\|Ga0193729_1113078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1019	Open in IMG/M
3300019888\|Ga0193751_1095800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1151	Open in IMG/M
3300020021\|Ga0193726_1070817	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300020579\|Ga0210407_10546310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	904	Open in IMG/M
3300021861\|Ga0213853_10184633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	595	Open in IMG/M
3300022507\|Ga0222729_1047022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	588	Open in IMG/M
3300022510\|Ga0242652_1032028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	608	Open in IMG/M
3300022557\|Ga0212123_10129053	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300023075\|Ga0224520_1009488	All Organisms → cellular organisms → Bacteria	2493	Open in IMG/M
3300023255\|Ga0224547_1002565	All Organisms → cellular organisms → Bacteria	2207	Open in IMG/M
3300024049\|Ga0233359_1012749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	906	Open in IMG/M
3300025443\|Ga0208081_1006461	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300025457\|Ga0208850_1007392	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300025495\|Ga0207932_1008888	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300025527\|Ga0208714_1025646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1402	Open in IMG/M
3300025579\|Ga0207927_1001295	All Organisms → cellular organisms → Bacteria → Acidobacteria	10773	Open in IMG/M
3300025716\|Ga0209746_1011780	All Organisms → cellular organisms → Bacteria → Proteobacteria	3520	Open in IMG/M
3300025716\|Ga0209746_1070146	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1127	Open in IMG/M
3300025852\|Ga0209124_10085725	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300025857\|Ga0209014_10046985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1893	Open in IMG/M
3300025864\|Ga0209429_10353264	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025878\|Ga0209584_10006808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3750	Open in IMG/M
3300025878\|Ga0209584_10129505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	944	Open in IMG/M
3300025888\|Ga0209540_10543937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	600	Open in IMG/M
3300026214\|Ga0209838_1003219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2310	Open in IMG/M
3300026215\|Ga0209849_1091812	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300026281\|Ga0209863_10033079	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300026542\|Ga0209805_1374247	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026551\|Ga0209648_10589547	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300026557\|Ga0179587_10341390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	970	Open in IMG/M
3300027381\|Ga0208983_1007556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2023	Open in IMG/M
3300027587\|Ga0209220_1019164	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300027835\|Ga0209515_10578943	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027842\|Ga0209580_10120352	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300028536\|Ga0137415_10048954	All Organisms → cellular organisms → Bacteria	4107	Open in IMG/M
3300029989\|Ga0311365_11058970	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300030002\|Ga0311350_11493076	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031231\|Ga0170824_115666625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1025	Open in IMG/M
3300031231\|Ga0170824_115906789	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031258\|Ga0302318_10045664	All Organisms → cellular organisms → Bacteria	1740	Open in IMG/M
3300031344\|Ga0265316_10084900	All Organisms → cellular organisms → Bacteria	2423	Open in IMG/M
3300031446\|Ga0170820_16797164	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300031469\|Ga0170819_14699048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	642	Open in IMG/M
3300031754\|Ga0307475_10798640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	749	Open in IMG/M
3300031962\|Ga0307479_10116672	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300032160\|Ga0311301_10714372	All Organisms → cellular organisms → Bacteria → Proteobacteria	1404	Open in IMG/M
3300032828\|Ga0335080_11995118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	562	Open in IMG/M
3300032898\|Ga0335072_10254872	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300033413\|Ga0316603_10304555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1409	Open in IMG/M
3300033433\|Ga0326726_11261301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	719	Open in IMG/M
3300033887\|Ga0334790_054752	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300034125\|Ga0370484_0009215	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300034125\|Ga0370484_0077567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	851	Open in IMG/M
3300034125\|Ga0370484_0216087	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300034128\|Ga0370490_0103085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	933	Open in IMG/M
3300034129\|Ga0370493_0275654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	573	Open in IMG/M
3300034170\|Ga0370487_0019261	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300034195\|Ga0370501_0068864	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.96%
Host-Associated	Host-Associated	5.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.61%
Aquatic	Environmental → Aquatic	9.35%
Plants	Host-Associated → Plants	5.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.58%
Freshwater	Environmental → Aquatic → Freshwater	7.19%
Peat	Environmental → Terrestrial → Peat	5.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.32%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.44%
Sediment	Environmental → Aquatic → Sediment	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.60%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.44%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.44%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	18.70%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.44%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	15.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.04%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	5.04%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.16%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.16%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.44%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.44%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.44%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.44%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2140918024	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2140918025	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental	Open in IMG/M
3300001423	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002069	Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002183	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005949	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011079	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 54 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015076	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6a, vegetation/snow interface)	Environmental	Open in IMG/M
3300015085	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300024049	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-P30	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034170	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_01184100	2088090004	Soil	MVEESRTSNGIFRMSDHLGVGEGQRYPRDRVMPVEGRTLASGVLAKKERSGDWQ
beta3_all_00389080	2124908028	Soil	MVGESRAPNVIFGMTDHLGVGEGQRYRRDRVTPVEGRALACGVLEKEERSGDWR
B3_all_c_02970390	2124908038	Soil	RQWGRLGMVGESRAPNVIYGMTDHLGVGEGQMYRRSRVTPVEGRALASGVLEKEERSGDW
B_all_v_00139310	2140918024	Soil	TSNVIFGMTDHLGVGEGQMYLRNRVMLVEGRTLASGVLAKKERSGDWR
b3_nosca_v_01557660	2140918025	Soil	GNLRQWGRLGMVGESRASNVVYGMTDHLGVGEGQMYRRSRVTPVEGRALASGVLEKEERSGDWR
E41_03372880	2170459005	Grass Soil	MVVGSRPANAVVRVADHLGVGKGQRYRGSRVMPVEGRALTSVVFVKEGSTGD
JGI20175J14863_10070592	3300001396	Arctic Peat Soil	MVGESRTSNGIYRMTDHLGVGEGQMYPRNRVMPVEGRTLASGVLEKKERSGDWR*
JGI20199J14953_10019493	3300001423	Arctic Peat Soil	MVGESRAPNGIFRMSDHLGVGEGQRYPRSRVMPVEGRTLASGVLKKKERSGDWR*
JGI12635J15846_101970651	3300001593	Forest Soil	MVVGLRPANAVERAADHLGVGKGQRYRGSRVMPVEGRALTSVVFVKEGRTGD*
JGIcombinedJ21912_100652662	3300002069	Arctic Peat Soil	MVGESRAPNVIFGMTDHLGVGEGQMYPRNRVMPVEGRTLASGVLAKKERSGDWR*
JGI24145J26757_100621142	3300002183	Arctic Peat Soil	MVGESRAXNVVYGMTDHLGVGEGQRYRRSRVTPVEGRALASGVLEKEERSGDWR*
JGI24136J36422_100259541	3300002569	Arctic Peat Soil	MVVESRTANAARKSADHLGVGKGQRYRRSRVTPVEGRALTSGVFEKEGGTGD*
JGI24136J36422_101321301	3300002569	Arctic Peat Soil	MRQWGRLGMVGESRAPNVIFGMADHPGVGEGQRYRRSRVMPVEGRALASGVLEKKERNGDWQ*
Ga0066672_100610212	3300005167	Soil	MDGESRAPNASRMADRLGVGEGQRYLRSRVMPVEGRALTSGVLVKEERSGDWR*
Ga0066679_101059252	3300005176	Soil	VVEESRASNVINRMADHLGVGKGQMYQRSRVTPVEGRALTSGVLEKEERSGDWR*
Ga0066675_105038422	3300005187	Soil	MVGESRAPNVIFGMPDHLGVGEGQKYRRSRVMPVEGRALASGALEKEERSGDWRRA*
Ga0070741_101554912	3300005529	Surface Soil	MVGESRTSNGIERMADQLGVGEGQRYRGSRVMPVEGRTLTSGVLERKGRSGDWR*
Ga0070730_100972174	3300005537	Surface Soil	MVGESRAPNGIFRMADHLGVGEGQRYRRSRVMPVEGRALTSGVLAKKERSGD*
Ga0066708_101533881	3300005576	Soil	QWGRLGMVGGSRTPNVIHGMTDHLGVGEGQRYRRSRVMPVEGRALASGVLEKEERNGDWR
Ga0066788_100826201	3300005944	Soil	MVGESRAPNVIVRMADHLGVGEGQMYLRSRVTPVEGRTLTSGVLAKEEGDVDWRKPEIPTSRASCIGRRRTTVLRPSVAW*
Ga0066791_100108121	3300005949	Soil	MVVGSRPANAAERVADHLGVGKGQRYRRSRVTPVEGRTLTSGVFVKEGRTGD*
Ga0066787_100316092	3300005950	Soil	MAGESQTPNVNVRMAGHLGVGKGQMYLRSRVTPVEGRALTSGVLVKEERSGDWR*
Ga0080027_100670562	3300005993	Prmafrost Soil	MAGESRAPNVIVRMADHLGVGKGQMYLRSRVTPVEGRALTSGVLVKEERSGDWR*
Ga0080027_103524411	3300005993	Prmafrost Soil	MVGESRAPNVIVRMADHLGVGEGQMYLRSRVTPVEGRTLTSGVLAKEEGDVDWRKPEIPTSRASCI
Ga0097691_10226664	3300006055	Arctic Peat Soil	MVGESRAPNVIFGMTDHLGVGEGQMYPRNRAMPVEGRTLASGELAKKERSGDWR*
Ga0066653_101737812	3300006791	Soil	MVGESQPPNGICRMTDRLGVGEGQRYRRSRLTPVEGRALASGVLVKEERSGDWR*
Ga0075520_10741752	3300006795	Arctic Peat Soil	MVGESRTSNVIFGMTDHLGVGEGQMYLRNRVMPVEGRTLASGVLAKKERSGDWR*
Ga0066659_107914422	3300006797	Soil	MVGGSRTPNVIHGMTDHLGVGEGQRYRRSRVMRAEGRALASGVLEEEERSGDWP*
Ga0075433_101716962	3300006852	Populus Rhizosphere	MVGESRASNVIVGMADHLGVGEGQRYQRSRVMPVEGRALASGVLEKEERDGDWR*
Ga0075425_1003464503	3300006854	Populus Rhizosphere	EEGNLRQWGRPGMVGESRASNVIVGMADHLGVGEGQRYQRSRVMPVEGRALASGVLEKEERDGDWR*
Ga0099793_101582451	3300007258	Vadose Zone Soil	EGNLRQGGRPGMVEESRTSNGIDRMPDPLGVGKGQMYLRSRVMPVEGRALTSGVLVKEERSGDWR*
Ga0099794_101523292	3300007265	Vadose Zone Soil	MVEESRTSNGMDRMPDQLGVGKGQMYLRSRVMPVEGRALTSGVLVKEERSGDWR*
Ga0102924_10512581	3300007982	Iron-Sulfur Acid Spring	MVGESRAPNGIFRMADHLGVGEGQRYRGSRVMPVEGRALTSGVLAKKERSGD*
Ga0105105_107411961	3300009009	Freshwater Sediment	MVGESRAPNVIFGMADHPGVGEGQRYRRSRVMPVEGRALASGVLEKKERNGDWQ*
Ga0066710_1017458932	3300009012	Grasslands Soil	NDISRMADHLGVGKGQMYQRSGVTPVEGRALTSGVLEKEERSGDWR
Ga0066793_103768261	3300009029	Prmafrost Soil	MVEESRTSNGIFRMSDHLGVGEGQRYPRDRVMPVEGRTLASGVLAKKERSGDWQ*
Ga0099830_117581771	3300009088	Vadose Zone Soil	MVGESRTSKGIFRMADHLGVGKGQMYRCSRGMPGEGRALTSGVLVKEERCG
Ga0066709_1018931732	3300009137	Grasslands Soil	MVGESRAPNVILGMADHLGVGEGQRYQRSRVMPVEGRALASGVLEKEERNGDWP*
Ga0099792_106382781	3300009143	Vadose Zone Soil	MVVGSRPANAVVRVADHLGVGKGQRYRGSRVMPVEGRALTSVVFVKEGRTGD*
Ga0114129_106955991	3300009147	Populus Rhizosphere	SRASNVIVGMADHLGVGEGQRYQRSRVMPVEGRALASGVLEKEERDGDWR*
Ga0075423_102523102	3300009162	Populus Rhizosphere	MVGESRASNVIVGMADHLGVGEGQRYQRSRVTPVEGRALASGVLEKEERDGDWR*
Ga0116225_13662841	3300009524	Peatlands Soil	MVGEKRIPPPPERAAGHLGVGEGQRYQGSRVMPVEGRTLASGVFVKEGGCVCEGGRTGD*
Ga0116133_10514512	3300009623	Peatland	MVGESRTSNVIERVAAHLGVGEGQRYRRSRVTPVEGRALTSGVLEKEERSGDWR*
Ga0116125_12614241	3300009628	Peatland	TSNVIFRMADHLGVGEGQRYRRSRVMPVEGRALASGAFEKKGRSGDWR*
Ga0134063_104449062	3300010335	Grasslands Soil	GESRASNVMVGMADHLGVGEGQRYQRSRVTPVEGRALASGVLEKEERDGDWR*
Ga0126379_124581281	3300010366	Tropical Forest Soil	MVAESRAANVVFRMTDHLGVGEGQRYRRSRITPVEGRALTSGVLEK
Ga0126381_1030112861	3300010376	Tropical Forest Soil	MDAESRAANVVFRMTDHLGVGEGQRYRRSRITPVEGRALTSGVLEKEERSGD
Ga0126348_10741931	3300010862	Boreal Forest Soil	MVGESQSPNAIERMADHLGVGEGQKYLGSRVTPVEGRALASGELEKEERSGDWRKA*
Ga0126350_115568382	3300010880	Boreal Forest Soil	MVGESQTPNGIDRMSDHLGVGKGQRYLRSRVTPVEGRALTSGVLEKEERNGDWR*
Ga0138569_11728551	3300011079	Peatlands Soil	MVGESQSSNAILRMEDHLGVGEGQKYRRSRVTPGEGRALASGALEKEERSG
Ga0150983_153464622	3300011120	Forest Soil	MVGESRTSNVVFGTADHLGVGEGQRYRRSRVMPVEGRALASGVLGKKERSGDWR*
Ga0137392_112966621	3300011269	Vadose Zone Soil	MVVGSRPTNAVVRAEDHLGVGKGQRYRGSRVMPVEGRALTSVVFVKEGRTGD*
Ga0137463_10440163	3300011444	Soil	VGEAREVEESRASNAIVWMADYLGVGEGQRYLGSRVMPVEGRALVSGVLVKEGRNGD*
Ga0137363_104062561	3300012202	Vadose Zone Soil	VVEESRASNDISRMADHLGVGKGQMYQRSRVTPVEGRALTSGVLEKEERSGDWR*
Ga0137379_100899515	3300012209	Vadose Zone Soil	KEGNLRQWGRLGMVGESRTSNVTFGVTDHLGVGEGQRYQRSRVMPVEGRALASGVLEKEERNGDWR*
Ga0137378_101265041	3300012210	Vadose Zone Soil	MVGESRTPNVIVEMADRLGVGEGQRYLRSRVMPVEGRALTSGVLVKEERSGDWR*
Ga0150985_1114344781	3300012212	Avena Fatua Rhizosphere	MVGESRAPNVVEGMTDHLGVGVGQRYRGSRVTPVEGRAHTSGVLEKEERSGDWR*
Ga0137398_107216521	3300012683	Vadose Zone Soil	GMVGESRAPNVIVRMADRLGVGKGQMYLRSRVMPVEGRALASGVLVKEERSGDWRRA*
Ga0137396_101200992	3300012918	Vadose Zone Soil	MVEESRTWNGIVRMTDHLGVGKGQMYLRSRVMPGEGRALTSGVLEKEERSGD*
Ga0137396_101365363	3300012918	Vadose Zone Soil	EGNPRQWGRPGMVEESRTSNGIDRMPDHLGVGKGQMYLRSRVMPVEGRALTSGVLVKEERSGDWR*
Ga0137404_117547101	3300012929	Vadose Zone Soil	MPGSQSQWGRLGVVEESRASNVINRMADHLGVGKGQMYQRSRVTPVEGRALTLDVLLKKRRTGDWR*
Ga0164301_104629041	3300012960	Soil	MVGGSRTPNVITRMTDHLGVGEGQKYRGSRVMPVEGRALASGVLAKKERSGDWP*
Ga0164309_109523161	3300012984	Soil	MVGGSRTPNVIHGMTDHLGVGEGQRYRRNRVMPVEGRALASGVLAKKERSGDWP*
Ga0157378_100962663	3300013297	Miscanthus Rhizosphere	MVGESQSSNANVRKADHLGVGEGQKYLRSRVTLVERRALASGVLEKEERNGDWR*
Ga0182010_101136871	3300014490	Fen	MVGESRAPNVIFGMTDHLGVGEGQRYRRDRVTPVEGRALASGVLEKEERSGDWR*
Ga0182016_105830321	3300014493	Bog	PNVVARMADHLGVGKGQMYRRSRVTPVEGRALAAGVLVKEERSGDWR*
Ga0182017_105059522	3300014494	Fen	NLRQWGRLGMVGESRAPNVIFGMTDHLGVGEGQRYRRDRVTPVEGRALASGVLEKEERSGDWR*
Ga0182011_103511801	3300014496	Fen	MVGESRASNVVYGMTDRLGVGEGQRYRRSRVMPVEGRALASGVLEKEERNGDWR*
Ga0182024_103905632	3300014501	Permafrost	MVQESRTSNGIERMPDHLGVGEGQRYRGSRVTPVEGRALAFGVLEKEERNGD*
Ga0182021_102300232	3300014502	Fen	MVGESRAPNVIFGMADHPGVGEGQRYRRGRVMPVEGRALASGVLEKKERNGDWQ*
Ga0167656_10039491	3300015076	Glacier Forefield Soil	MVEESRTSNGIDRMPDHLGVGKGQMYLRSRVMPVEGRALTSGVLVKEERNGDWR*
Ga0167632_10040381	3300015085	Glacier Forefield Soil	MVGESQSSNASRMADRLGVGKGQRYLRSRVTPVEGRALTSGVLVKEERSGDWR*
Ga0134072_102286691	3300015357	Grasslands Soil	MVGESRAPNVILGMADHLGVGEGQRYRRSRVMPVEGRALASGVLEKKERSGDWP*
Ga0181505_102043142	3300016750	Peatland	HARKVICVSGGGPGVVEESRTSNVIFRMADHLGVGEGQRYRRSRVTPVEGRALASGAFEKKGRSGDWR
Ga0187877_11542341	3300017931	Peatland	MVGESQSPNVVARMADHLGVGKGQMYRRSRVTPVEGRALASGVLVKEERSGDW
Ga0181520_110086722	3300017988	Bog	EEGSLRQWGRPGMVGESQSPNVVARMADHLGVGKGQMYRRSGVTPVEGRALASGVLVKEERSGDWR
Ga0187875_100929432	3300018035	Peatland	MVGESRTSNVIERVAAHLGVGEGQRYRRSRVTPVEGRALTSGVLEKEERSGDWR
Ga0187883_104912262	3300018037	Peatland	MVVGSRPANVAVRAADHLGVGEGQRYRGSRVTPVEGRTLASGVFAKEGRTGD
Ga0066669_102595262	3300018482	Grasslands Soil	MVGESQPPNGICRMTDRLGVGEGQRYRRSRLTPVEGRALASGVLVKEERSGDWR
Ga0182028_13421312	3300019788	Fen	MVGESRAPNGIFRMSDHLGVGEGQRYPRSRVMPVEGRTLASGVLEKKERSGDWR
Ga0182028_14016092	3300019788	Fen	MVAGSRTANVARKGGDPLGVGKGQMYRGSRVTPGEGRALASGVFVKEERTGEWR
Ga0193729_11130781	3300019887	Soil	MVGESRAPNVIVRMADRLGVGKGQMYQRSRVMPVEGRALASGVLVKEERSGDWRRA
Ga0193751_10958002	3300019888	Soil	MVGESRAPNGIGRMADHLGVGKGQMYQRSRVTPVEGRALASGVLEKKERSGDWR
Ga0193726_10708171	3300020021	Soil	ASNVIDRMADHLGVGEGQMYQRSQVTLVEGRALTSGELEKEERSGDWR
Ga0210407_105463101	3300020579	Soil	MVGESRTPNGIVRMADHLGVGEGQRYLRSRVTPVEGRALTSGVLGKEEGDVDWRKPEIPTSRASCIGRRRTTVLRPSVA
Ga0213853_101846331	3300021861	Watersheds	MVEESQTSNVIGRMADRLGVGEGQKYLGSRVMPVEGRTLASGRFVKKGRNGD
Ga0222729_10470221	3300022507	Soil	MVGESRTPNGIVRMADHLGVGEGQRYLRSRVTPVEGRALTSGVLGKEEGDVDWRKPEIPTSRASC
Ga0242652_10320281	3300022510	Soil	MVGESRTPNGIVRMADHLGVGEGQRYLRSRVTPVEGRALTSGVLGKEEGDVDWRKPEIPTSRASCIG
Ga0212123_101290532	3300022557	Iron-Sulfur Acid Spring	MVGESRAPNGIFRMADHLGVGEGQRYRGSRVMPVEGRALTSGVLAKKERSGD
Ga0224520_10094883	3300023075	Soil	MVGESRAPNVIFGMTDHLGVGEGQRYRRDRVTPVEGRALASGVLEKEERSGDWR
Ga0224547_10025653	3300023255	Soil	MVEESRTSNGIERMPDHLGVGEGQRYRGSRVTPVEGRALAFGVLEKEERNGD
Ga0233359_10127491	3300024049	Soil	MVGESRAPNVIVRMADRLGVGKGQMYLRSRVMPVEGRALASGVLVKEERSGDWRRA
Ga0208081_10064613	3300025443	Arctic Peat Soil	MVGESRAPNVIFGMADHPGVGEGQRYRRSRVMPVEGRALASGVLEKKERNGDWQ
Ga0208850_10073922	3300025457	Arctic Peat Soil	MVGESRAPNVIFGMTDHLGVGEGQMYPRNRAMPVEGRTLASGELAKKERSGDWR
Ga0207932_10088882	3300025495	Arctic Peat Soil	MVGESRAPNGIFRMSDHLGVGEGQRYPRSRVMPVEGRTLASGVLKKKERSGDWR
Ga0208714_10256461	3300025527	Arctic Peat Soil	MVGESQTSNGICRMADHLGVGKGQKYQGSRVTPVEGRALTSGELEKEERSGDWR
Ga0207927_10012952	3300025579	Arctic Peat Soil	MVGESRTSNGIYRMTDHLGVGEGQMYPRNRVMPVEGRTLASGVLAKKERSGDWR
Ga0209746_10117801	3300025716	Arctic Peat Soil	MVGESRAPNVIFGMADHPGVGEGQRYRRSRVMPVEGRALASGVLEKEKRNGDWR
Ga0209746_10701462	3300025716	Arctic Peat Soil	MVVESRTANAARKSADHLGVGKGQRYRRSRVTPVEGRALTSGVFEKEGGTGD
Ga0209124_100857251	3300025852	Arctic Peat Soil	QWGRPGMVVESRTANAARKSADHLGVGKGQRYRRSRVTPVEGRALTSGVFEKEGGTGD
Ga0209014_100469851	3300025857	Arctic Peat Soil	MVGESRAPNVIFGMTDHLGVGEGQMYPRNRVMPVEGRTLASGELAKKERSGDWR
Ga0209429_103532642	3300025864	Arctic Peat Soil	RNVIFGMADHLGVGEGQRYRRSRVMPVEGRALASGVLEKEKRNGDWR
Ga0209584_100068081	3300025878	Arctic Peat Soil	MVGESRTSNGIYRMADHLGVGEGQRYLRSRVTPVEGRALASGVLEKEERSGDWR
Ga0209584_101295051	3300025878	Arctic Peat Soil	MVGESRTSNVIFGMTDHLGVGEGQMYLRNRVMPVEGRTLASGVLAKKERSGDWR
Ga0209540_105439372	3300025888	Arctic Peat Soil	MVVESRTANAARKSADHLGVGKGQRYRRSRVTPVEGRALTSGVFEKEGGP
Ga0209838_10032191	3300026214	Soil	MVVGSRPANAAERVADHLGVGKGQRYRRSRVTPVEGRTLTSGVFVKEGRTGD
Ga0209849_10918122	3300026215	Soil	EEGNLRQWGRPGMVGASQSPNVIVRMADHLGVGKGQRYRRSRVTPVEGRTLTSGELVKEERSGDWR
Ga0209863_100330792	3300026281	Prmafrost Soil	MVGESRAPNVIVRMADHLGVGEGQMYLRSRVTPVEGRTLTSGVLAKEEGDVDWRKPEIPTSRASCIGRRRTTVLRPSVAW
Ga0209805_13742471	3300026542	Soil	LRQWGRPGMDGESRAPNASRMADRLGVGEGQRYLRSRVMPVEGRALTSGVLVKEERSGDW
Ga0209648_105895472	3300026551	Grasslands Soil	NDISRMADHLGVGKGQMYQRSRVTPVEGRALTSGVLEKEERSGDWR
Ga0179587_103413901	3300026557	Vadose Zone Soil	MVGESQAPNGIGRMADHLGVGKGQMYQRSRVTPVEGRALASGVLEKKERSGDWR
Ga0208983_10075562	3300027381	Forest Soil	MVGESRAPNGIGRMSDHLGVGKGQMYQRSRVTPVEGRALASGVLEKKERSGDWR
Ga0209220_10191642	3300027587	Forest Soil	MVVGLRPANAVERAADHLGVGKGQRYRGSRVMPVEGRALTSVVFVKEGRTGD
Ga0209515_105789432	3300027835	Groundwater	MVGESRAPNVIFGMTDHLGVGEGQKYRRSRVMPVEERALASGVLEKEERNGDWR
Ga0209580_101203522	3300027842	Surface Soil	MVGESRAPNGIFRMADHLGVGEGQRYRRSRVMPVEGRALTSGVLAKKERSGD
Ga0137415_100489542	3300028536	Vadose Zone Soil	MVEDSRTSNGIERMPDHLGVGKGQMYLRSRVMPGEGRALTSGVLL
Ga0311365_110589702	3300029989	Fen	QWGRLGIVGESRAPNVIFGMTDHLGVGEGQRYRRDRVTPVEGRALASGVLEKEERSGDWR
Ga0311350_114930761	3300030002	Fen	RASNVIFGMTDHLGVGEGQMYRRSRVMPVEGRALASGVLEKEERSGDW
Ga0170824_1156666252	3300031231	Forest Soil	MIVGSRPANAVVRVADHLGVGKGQRYRRSRVMPVEGRALTSVVFVKEGRTGD
Ga0170824_1159067892	3300031231	Forest Soil	LRQWGRFGMVGESRAPNVIFGMTDHLGVGEGQKYRRSLVMPVEGRALASGVFVKRRRRGD
Ga0302318_100456641	3300031258	Bog	CEEGSLRQWGRPGMVGESQSPNVVARMADHLGVGKGQMYRRSRVTPVEGRALAAGVLVKEERSGDWR
Ga0265316_100849002	3300031344	Rhizosphere	MVGKSRTPNGIERMADHLGVGKGQRYRGSRVTPVEGRALASGVLEKEERNGDWR
Ga0170820_167971641	3300031446	Forest Soil	GVVAELRSVNVVERAMDHLGVGEGQRYRRSRVMPVEGRALTSGVLEKEERYGDWR
Ga0170819_146990482	3300031469	Forest Soil	MVGKSQIPNAIVRMVDRLGVGKGQRYRRSRVMPVEGRALTSGVLEKEE
Ga0307475_107986401	3300031754	Hardwood Forest Soil	MVGESRTPNGICRRADHLGVGEGQRYRRSRVTPVEGRTLASGVLEKEGRSGDW
Ga0307479_101166722	3300031962	Hardwood Forest Soil	MIVGSRPANAVVRVADHLGVGKGQRYRGSRVMPVEGRALTSVVFVKEGRTGD
Ga0311301_107143721	3300032160	Peatlands Soil	GESQAPNGIDRMADPLGVGKGQRYLRSRVMPAEGRTLISGVLEKEERSGDWR
Ga0335080_119951181	3300032828	Soil	MVGESRNPNGIERMTDHLGVGEGQRYRRSRVMPVEGRALTSGELEKEGRSGDW
Ga0335072_102548721	3300032898	Soil	MVGESRTPNDIERMADHLGVGEGQRYRGSRVMPVEGRTLTTGVLERKGRSGDWR
Ga0316603_103045552	3300033413	Soil	MVGGSRTPNVIFGVTDHLGVGEGQKYRRSRVMPVEGRALASGVLEKEERNGDWR
Ga0326726_112613011	3300033433	Peat Soil	MVGESRTPNGIDRMSDHLGVGEGQRYLGSRVMPVEGRALASGELAKEGRNGDWR
Ga0334790_054752_1301_1459	3300033887	Soil	MVEESRTSNGIERMPDHLGVGEGQRYRGSRVTPVEGRALASGVLEKEERNGD
Ga0370484_0009215_1444_1608	3300034125	Untreated Peat Soil	MVGESRTSNGIYRMTDHLGVGEGQRYPRNRAMPVEGRTLASGVLAKKERSGDWR
Ga0370484_0077567_451_615	3300034125	Untreated Peat Soil	MVGESRAPNVIFGMTDHLGVGEGQRYRRSRVMPVEGRALTSGVLEKEERNGDWR
Ga0370484_0216087_3_188	3300034125	Untreated Peat Soil	RQWGRLGMVGESRTSNGIYRMADHLGVGEGQRYLRSRVTPVEGRALASGVLEKEERSGDW
Ga0370490_0103085_1_159	3300034128	Untreated Peat Soil	MVGESRAPNVIFGMADHPGVGEGQRYRRSRVMPVEGRALASGVLEKKERNGDW
Ga0370493_0275654_186_344	3300034129	Untreated Peat Soil	MIAESRTANVVGRAADDLGVGEGQRYRRSRVTPVEGRTLASGELGKKGRRGD
Ga0370487_0019261_360_518	3300034170	Untreated Peat Soil	MVAASRTVNAAEWAADHLGVGEGQMYRRSRVTPVEGRTLTSGVFEKEGRRGD
Ga0370501_0068864_92_256	3300034195	Untreated Peat Soil	MVGESRAPNVILRMTDHLGVGEGQMYRRSRVTPVEGRALASGVLEKEERSGDWR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055310

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences