Metagenome / Metatranscriptome Family F055000

Basic Information
Family ID	F055000
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	47 residues
Representative Sequence	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS
Number of Associated Samples	116
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.61 %
% of genes near scaffold ends (potentially truncated)	69.06 %
% of genes from short scaffolds (< 2000 bps)	92.81 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (77.698 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.791 % of family members)
Environment Ontology (ENVO)	Unclassified (20.144 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.007 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.70% β-sheet: 0.00% Coil/Unstructured: 47.30%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01610	DDE_Tnp_ISL3	3.60
PF06782	UPF0236	2.16
PF13751	DDE_Tnp_1_6	2.16
PF01609	DDE_Tnp_1	1.44
PF02661	Fic	1.44
PF00239	Resolvase	1.44
PF00072	Response_reg	0.72
PF07603	DUF1566	0.72
PF12323	HTH_OrfB_IS605	0.72
PF13579	Glyco_trans_4_4	0.72
PF00535	Glycos_transf_2	0.72
PF13565	HTH_32	0.72
PF00128	Alpha-amylase	0.72
PF01850	PIN	0.72
PF13517	FG-GAP_3	0.72
PF00067	p450	0.72
PF09940	DUF2172	0.72
PF13414	TPR_11	0.72
PF08448	PAS_4	0.72
PF13546	DDE_5	0.72
PF13229	Beta_helix	0.72
PF03100	CcmE	0.72
PF01526	DDE_Tnp_Tn3	0.72
PF00574	CLP_protease	0.72
PF13683	rve_3	0.72
PF11848	DUF3368	0.72
PF02518	HATPase_c	0.72
PF02738	MoCoBD_1	0.72
PF08241	Methyltransf_11	0.72
PF13340	DUF4096	0.72
PF13238	AAA_18	0.72
PF02899	Phage_int_SAM_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3464	Transposase	Mobilome: prophages, transposons [X]	3.60
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.44
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.44
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.44
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.44
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.44
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.44
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.44
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.44
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.44
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.44
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.72
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.72
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.72
COG2124	Cytochrome P450	Defense mechanisms [V]	0.72
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.72
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.72
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.72
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.70 %
Unclassified	root	N/A	22.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.70 %
Unclassified	root	N/A	22.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.70 %
Unclassified	root	N/A	22.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.76 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	2.16 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.44 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.32 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.88 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	2.16 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.16 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.44 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.72 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.32 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.88 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2.16 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.44 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.72 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Caldilineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.44 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	1.44 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	1.44 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.72 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.72 %
unclassified Caldilineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae	0.72 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.72 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.72 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.72 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.44 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	1.44 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.72 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.72 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.72 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.72 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.72 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.44 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	1.44 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.72 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.72 %
Desulforapulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulforapulum	0.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.72 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.72 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.72 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.44 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	1.44 %
Desulforapulum autotrophicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulforapulum → Desulforapulum autotrophicum	0.72 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.72 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.72 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.72 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.72 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.30 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.44 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.44 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	1.44 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	0.72 %
Desulforapulum autotrophicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulforapulum → Desulforapulum autotrophicum	0.72 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.72 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.72 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.72 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.72 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.72 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Candidatus Entotheonella gemina	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	0.72 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10921776	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300000955\|JGI1027J12803_100845623	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300000955\|JGI1027J12803_102290156	Not Available	1348	Open in IMG/M
3300000955\|JGI1027J12803_109112542	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300004153\|Ga0063455_100879407	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005167\|Ga0066672_10133327	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300005167\|Ga0066672_10646078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	683	Open in IMG/M
3300005178\|Ga0066688_10203827	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005180\|Ga0066685_10462607	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005294\|Ga0065705_10004843	All Organisms → cellular organisms → Bacteria	5901	Open in IMG/M
3300005294\|Ga0065705_10179772	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300005332\|Ga0066388_108382464	Not Available	515	Open in IMG/M
3300005445\|Ga0070708_100131518	All Organisms → cellular organisms → Bacteria → Proteobacteria	2316	Open in IMG/M
3300005445\|Ga0070708_100198259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1879	Open in IMG/M
3300005518\|Ga0070699_100449406	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300005554\|Ga0066661_10831438	Not Available	540	Open in IMG/M
3300005558\|Ga0066698_10996088	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005568\|Ga0066703_10870646	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005764\|Ga0066903_101932595	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300005764\|Ga0066903_107605685	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300005840\|Ga0068870_10481823	Not Available	823	Open in IMG/M
3300005983\|Ga0081540_1141377	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300006058\|Ga0075432_10047042	All Organisms → cellular organisms → Bacteria	1516	Open in IMG/M
3300006194\|Ga0075427_10105263	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006844\|Ga0075428_100257767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1878	Open in IMG/M
3300006871\|Ga0075434_100221691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1911	Open in IMG/M
3300006903\|Ga0075426_10078681	Not Available	2356	Open in IMG/M
3300006969\|Ga0075419_10559877	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300007076\|Ga0075435_100601462	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300007255\|Ga0099791_10362608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	695	Open in IMG/M
3300007265\|Ga0099794_10346117	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300007265\|Ga0099794_10417484	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300009012\|Ga0066710_100668226	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300009012\|Ga0066710_101190167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1181	Open in IMG/M
3300009038\|Ga0099829_11786712	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009090\|Ga0099827_10216395	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300009100\|Ga0075418_10421671	Not Available	1428	Open in IMG/M
3300009137\|Ga0066709_100353661	Not Available	2020	Open in IMG/M
3300009137\|Ga0066709_101587216	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300009147\|Ga0114129_10399778	Not Available	1811	Open in IMG/M
3300009147\|Ga0114129_10650364	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1361	Open in IMG/M
3300009162\|Ga0075423_12349781	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009818\|Ga0105072_1098006	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009822\|Ga0105066_1060764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	802	Open in IMG/M
3300009836\|Ga0105068_1076359	Not Available	631	Open in IMG/M
3300010029\|Ga0105074_1099406	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300010038\|Ga0126315_10161378	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300010042\|Ga0126314_11316810	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010042\|Ga0126314_11439932	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010045\|Ga0126311_10343193	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300010046\|Ga0126384_11785961	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010329\|Ga0134111_10334722	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300010333\|Ga0134080_10055765	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300010333\|Ga0134080_10086127	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300010359\|Ga0126376_12240867	Not Available	592	Open in IMG/M
3300010359\|Ga0126376_12535900	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010361\|Ga0126378_10150438	All Organisms → cellular organisms → Bacteria	2369	Open in IMG/M
3300010361\|Ga0126378_11638631	Not Available	731	Open in IMG/M
3300010362\|Ga0126377_10853046	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300010362\|Ga0126377_11048785	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300010366\|Ga0126379_10637851	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300010366\|Ga0126379_11038662	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300010397\|Ga0134124_11592629	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	683	Open in IMG/M
3300011406\|Ga0137454_1096801	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012199\|Ga0137383_10939818	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300012212\|Ga0150985_102865435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	667	Open in IMG/M
3300012354\|Ga0137366_10227166	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300012361\|Ga0137360_10257937	Not Available	1434	Open in IMG/M
3300012361\|Ga0137360_11163345	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012380\|Ga0134047_1053236	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012384\|Ga0134036_1097287	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300012469\|Ga0150984_121818293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	885	Open in IMG/M
3300012685\|Ga0137397_11253611	Not Available	530	Open in IMG/M
3300012927\|Ga0137416_11138108	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	701	Open in IMG/M
3300012975\|Ga0134110_10129981	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300014488\|Ga0182001_10376055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	608	Open in IMG/M
3300015241\|Ga0137418_10342832	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1235	Open in IMG/M
3300015242\|Ga0137412_10512777	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300015264\|Ga0137403_11283771	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	578	Open in IMG/M
3300015356\|Ga0134073_10209226	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300015358\|Ga0134089_10337779	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300015374\|Ga0132255_100435818	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300016270\|Ga0182036_11161119	Not Available	641	Open in IMG/M
3300016319\|Ga0182033_10365963	Not Available	1210	Open in IMG/M
3300016357\|Ga0182032_11713023	Not Available	548	Open in IMG/M
3300016387\|Ga0182040_10064011	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300016387\|Ga0182040_10923102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	725	Open in IMG/M
3300016422\|Ga0182039_10760977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	858	Open in IMG/M
3300018052\|Ga0184638_1040006	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulforapulum → Desulforapulum autotrophicum	1702	Open in IMG/M
3300018077\|Ga0184633_10348320	Not Available	748	Open in IMG/M
3300018078\|Ga0184612_10215834	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300018079\|Ga0184627_10033953	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
3300019259\|Ga0184646_1429394	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300019867\|Ga0193704_1048228	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300020083\|Ga0194111_10584700	Not Available	703	Open in IMG/M
3300020109\|Ga0194112_10657635	Not Available	706	Open in IMG/M
3300021081\|Ga0210379_10181323	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300021476\|Ga0187846_10327212	Not Available	633	Open in IMG/M
3300022195\|Ga0222625_1284014	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300025910\|Ga0207684_10265801	Not Available	1480	Open in IMG/M
3300025918\|Ga0207662_11241501	Not Available	530	Open in IMG/M
3300025923\|Ga0207681_10187217	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300025942\|Ga0207689_10339245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1248	Open in IMG/M
3300026331\|Ga0209267_1086108	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300026540\|Ga0209376_1078702	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300027671\|Ga0209588_1265470	Not Available	521	Open in IMG/M
3300027873\|Ga0209814_10103040	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300027874\|Ga0209465_10011444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3942	Open in IMG/M
3300027880\|Ga0209481_10004526	All Organisms → cellular organisms → Bacteria	5861	Open in IMG/M
3300027880\|Ga0209481_10667463	Not Available	539	Open in IMG/M
3300027907\|Ga0207428_10143869	Not Available	1818	Open in IMG/M
3300027957\|Ga0209857_1025187	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300027961\|Ga0209853_1088707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	798	Open in IMG/M
3300028589\|Ga0247818_11279695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	526	Open in IMG/M
3300028716\|Ga0307311_10101400	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300028755\|Ga0307316_10245380	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300028771\|Ga0307320_10082126	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300028819\|Ga0307296_10223418	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300030902\|Ga0308202_1050793	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300030903\|Ga0308206_1073371	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031092\|Ga0308204_10061099	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300031092\|Ga0308204_10110762	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031093\|Ga0308197_10192072	Not Available	688	Open in IMG/M
3300031114\|Ga0308187_10146891	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300031114\|Ga0308187_10151124	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina	774	Open in IMG/M
3300031719\|Ga0306917_11065748	Not Available	630	Open in IMG/M
3300031744\|Ga0306918_10387009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1088	Open in IMG/M
3300031820\|Ga0307473_10065758	All Organisms → cellular organisms → Bacteria	1793	Open in IMG/M
3300031820\|Ga0307473_10781423	Not Available	679	Open in IMG/M
3300031821\|Ga0318567_10077950	Not Available	1761	Open in IMG/M
3300031897\|Ga0318520_10776018	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031942\|Ga0310916_11522539	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031995\|Ga0307409_100084617	All Organisms → cellular organisms → Bacteria	2576	Open in IMG/M
3300032004\|Ga0307414_11370529	Not Available	657	Open in IMG/M
3300032159\|Ga0268251_10210420	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300032159\|Ga0268251_10604935	Not Available	505	Open in IMG/M
3300034673\|Ga0314798_146864	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300034678\|Ga0314803_133986	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300034680\|Ga0370541_061754	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.30%
Host-Associated	Host-Associated	18.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.10%
Plants	Host-Associated → Plants	18.70%
Aquatic	Environmental → Aquatic	7.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.67%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Sediment	Environmental → Aquatic → Sediment	3.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.60%
Phylloplane	Host-Associated → Plants → Phylloplane	1.44%
Cave	Environmental → Terrestrial → Cave	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.23%
Loam	Environmental → Terrestrial → Soil → Loam	7.91%
Sand	Environmental → Terrestrial → Soil → Sand	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.16%
Lake	Environmental → Aquatic → Freshwater → Lake	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.44%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.35%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.76%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.16%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.44%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.44%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027957	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055000

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_109217761	3300000550	Soil	MRAAEIISFEEARARKQWDALRRHLHARFDQWLDTLEQQWHEL
JGI1027J12803_1008456231	3300000955	Soil	MGTAEVISFEEVRARKQWTIVRQQLHERFDQWCDALEERLSEPQPALAEVTQVVG
JGI1027J12803_1022901564	3300000955	Soil	MGAAEVIAFEEVRASKQWDTLRQPLHARFDQWLDTLEQQW
JGI1027J12803_1091125422	3300000955	Soil	IACEAVRASKQWDDLRGQLPTRFEQWRDAWAAQRQEPAPS*
Ga0063455_1008794071	3300004153	Soil	MGAAEVISFEEVRARKQWRTLRHQLHERFDQGLDTLEQQWHEPPSTLMEVTA
Ga0066672_101333271	3300005167	Soil	MGCAEIISLPEVRARKQSDALRQQLHARFDQWLDGLEEQFQEPEPT*
Ga0066672_106460783	3300005167	Soil	MGYAEIISLPEVRARKQWDLLRQQLHSRFDQWLDGLEEQLPEPESTLAEVTEAVWN*
Ga0066688_102038271	3300005178	Soil	MGAAEVISFEEVRARKQWDALRGQLPTRFDQWLDALEAQLQEPAPS*
Ga0066685_104626071	3300005180	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0065705_100048435	3300005294	Switchgrass Rhizosphere	MGCAEIISIDEVRARKRWESLRQQLHTRFDQWLDQLEEQWPESEPTLAVVTETV*
Ga0065705_101797721	3300005294	Switchgrass Rhizosphere	MGAAEVISFEEVRASKQWSTLRQQLHERFDQWLDTLEQAWHEPP
Ga0066388_1083824642	3300005332	Tropical Forest Soil	MGAAKLISCDEVRARKQWASLRQQLHACFDQWRDRLEEQWPEAEPTLAAVTETVWDLRQALTRS
Ga0070708_1001315183	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAEVISFEEVRARKQCDALRRQLHTHFDQWLDGLEAQLQEPAPT*
Ga0070708_1001982592	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDGLEAQLREPAST*
Ga0070699_1004494064	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGATEVIAFEEVRARKQWATLRQRLHERFDQWLDRLEERLQEPAPPLSAVTETVWH
Ga0066661_108314382	3300005554	Soil	MGYAEIISLPEVRARKQWDLLRQQLHSRFDQWLDGLEEQLPEPESTLAEV
Ga0066698_109960882	3300005558	Soil	HEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0066703_108706462	3300005568	Soil	MGAAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQAWHEPPATLSEV
Ga0066903_1019325952	3300005764	Tropical Forest Soil	MGGAEIIALSAVRARKQWEVLRPQLHERFDRWLDALAQQWPAPPST*
Ga0066903_1076056851	3300005764	Tropical Forest Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTL
Ga0068870_104818232	3300005840	Miscanthus Rhizosphere	MGAAEVVSFEDVRASKQWDALRHQLYERFDSSAMAQEQRHESKPTLAQVAETVWDLRHTLTGDMTEAI
Ga0081540_11413772	3300005983	Tabebuia Heterophylla Rhizosphere	MGCAEVIALDEVRASKQWESLRQQLHARFDPWLARLEDQWPESEPTLAAVTESV*
Ga0075432_100470422	3300006058	Populus Rhizosphere	MGAAEVIAFEEVRARRQWDTLRHQLHERFDQWLDTLETQWHEPPST*
Ga0075427_101052632	3300006194	Populus Rhizosphere	MGAAEIISFEEVRARKQWDTLRQALHTRFDEWLDRLEIQLPGAAPTLA
Ga0075428_1002577674	3300006844	Populus Rhizosphere	MGQAEVISLDEVRASKQWVSLRQQLHDYFDQWLDALQAQLPEPETTLE
Ga0075434_1002216915	3300006871	Populus Rhizosphere	MGCAEIISFDEVRARKQWESRRQQRHARFDQWLDQLEEQWPESEPTLAAVTET
Ga0075426_100786811	3300006903	Populus Rhizosphere	VGCAEVISLDEVRARKQWDALRQQRHARFDQWLDTLETQWPEPPATLPEV
Ga0075419_105598773	3300006969	Populus Rhizosphere	MGAAEVISFEEVRARKQWSALRQQLHERFDQWLDTLE
Ga0075435_1006014621	3300007076	Populus Rhizosphere	HEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDRLEAQ*
Ga0099791_103626082	3300007255	Vadose Zone Soil	MGAAEVISFEEVRARKQWSTLRHQLHERFDQWLDTLEQQWHEPPS
Ga0099794_103461172	3300007265	Vadose Zone Soil	MGCAEVISLTEVRASKQWDALRQQLHQRFDQWLDTLE
Ga0099794_104174841	3300007265	Vadose Zone Soil	MGYAEIISLPEVRARKHWDLLRQQLHARFDQWLDGLEEQ
Ga0066710_1006682263	3300009012	Grasslands Soil	FILPHEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPTPS
Ga0066710_1011901672	3300009012	Grasslands Soil	MGAAKVISFEEVRARKQWNALRHQLHDRFDQWLYGLEAELQEHE
Ga0099829_117867122	3300009038	Vadose Zone Soil	MGAAEVIAFAAVRASKQWDTLRHQLHERFDQWLDTLE
Ga0099827_102163952	3300009090	Vadose Zone Soil	MGYAEIISLPEVRARKQWDLLRQQLHSRFDQWLDGLEEQLPEPEST*
Ga0075418_104216713	3300009100	Populus Rhizosphere	VGCPEVISFPEVRASKQWEALHQQLHARFDQWLDTLEQQW
Ga0066709_1003536613	3300009137	Grasslands Soil	MGCAAEVISLGEVRARQQWETLRQRLHDRFDQWLDGLETQLPEAEPTVAQV
Ga0066709_1015872162	3300009137	Grasslands Soil	FILPHEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0114129_103997781	3300009147	Populus Rhizosphere	AEVIAFEDVRARKQWDTLRQQLHERFDQWLDTLE*
Ga0114129_106503643	3300009147	Populus Rhizosphere	MGPAEGISFEEVRARKQRTILRQQLHERFDQWRDALEER
Ga0075423_123497813	3300009162	Populus Rhizosphere	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWH
Ga0105072_10980062	3300009818	Groundwater Sand	MGYAEIISLPEVRARKQWDLLRQQLHSRFDQWLDGLERSIR*
Ga0105066_10607641	3300009822	Groundwater Sand	MGCAAEVISLPEVRASKQWDSLREQLHTRFDQWLDRLEEHLQEPAPTLAA
Ga0105068_10763592	3300009836	Groundwater Sand	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLEEQLHEPEPTLA
Ga0105074_10994062	3300010029	Groundwater Sand	MGAAEIISFEEVRARKQWDALRQELHTRFDQWLDALETQLPGPAPTLAQV
Ga0126315_101613782	3300010038	Serpentine Soil	MGAAEVLSFEEVRARQQWDALRHQLHERFDQWLDGVEEQLHEPKPT*
Ga0126314_113168101	3300010042	Serpentine Soil	AAEVLSFEEVRARQQWDALRHQLHERFDQWLDGLEEQLHEPVVFQTWI*
Ga0126314_114399322	3300010042	Serpentine Soil	MGAAEVLSFEEVRARQQWDALRHQLHERFDQWLDGLEEQLHE
Ga0126311_103431931	3300010045	Serpentine Soil	MGAAEIISFEEVRARKQREALRQELHTRFDEWLDRLEIQLPGSTPTLAQVTETVWN
Ga0126384_117859611	3300010046	Tropical Forest Soil	VGCAEGIAFDEVRARKQWDTLRHQLHAHFDQWLDTLETQ
Ga0134111_103347222	3300010329	Grasslands Soil	SPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0134080_100557651	3300010333	Grasslands Soil	HYFILPYEESPMGTAEIISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0134080_100861272	3300010333	Grasslands Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLEAQLQEPEPTLTQVTETV*
Ga0126376_122408672	3300010359	Tropical Forest Soil	IAFEEVRARQQWDALRRQLYTRFDQWLAGLEAPLQEPPPT*
Ga0126376_125359001	3300010359	Tropical Forest Soil	VGCAEIISLPEVRARKQWEALRQQLHARFDQWLDTLAQQWPEPPSTFPEVT
Ga0126378_101504382	3300010361	Tropical Forest Soil	MGAAEVIAFEEVRARKHWDTLRHQLHERFDQWLDTLETQWHEPPATLPDNSVIFQRL*
Ga0126378_116386311	3300010361	Tropical Forest Soil	MGAAELISFEEVRARKQWDALRRQLHTRFDQWLDELEDQLPEPAPSLAQVTET
Ga0126377_108530461	3300010362	Tropical Forest Soil	MGAAEVISFEEVRARKPWDTLRQQLHARFDHWLDTLEQQWYEPPST
Ga0126377_110487851	3300010362	Tropical Forest Soil	MGAAEVIAFEEVRARKPWDTLRHQLHARFDQWLDTLE
Ga0126379_106378512	3300010366	Tropical Forest Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQW
Ga0126379_110386621	3300010366	Tropical Forest Soil	MGAAEVIAFEEVRARKQWDSLRHQLHERFDQWLDTLETQWHEPPSTL
Ga0134124_115926292	3300010397	Terrestrial Soil	MGAAEVIAFEEVRARKQWDALRGQLHNRFDQWLDRLEAQLQEPAATL
Ga0137454_10968012	3300011406	Soil	MGSAEIISFEEVRARKQWDTLRRQLHARFDQWLDGLEAQLPEPAPT*
Ga0137383_109398181	3300012199	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS*
Ga0150985_1028654352	3300012212	Avena Fatua Rhizosphere	MGVAEVIAFEEVRARKQWDALRRQLHTRFDQWLD*
Ga0137366_102271662	3300012354	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLGAHL*
Ga0137360_102579371	3300012361	Vadose Zone Soil	MGAAEIISFEEVRARKQWSTLRQQLHKRFDQWLDTLEQQ
Ga0137360_111633451	3300012361	Vadose Zone Soil	MGCAAEVISLGDVRARKQWETLRQRLHDRFDQWLDGLETQLPESEPTLAQV
Ga0134047_10532362	3300012380	Grasslands Soil	MGAPEVISFEEVRARKQWDALRGRLHTRFDQWLDALEAQLQEPAPS*
Ga0134036_10972871	3300012384	Grasslands Soil	MGCAELISFDEVRARKQWESLRQQLHVRFDHWLDRLEEQWPEPAST
Ga0150984_1218182933	3300012469	Avena Fatua Rhizosphere	MGCAAKVISLDEVRARQHWDTLRQHLHDRFDQWLDGLEAQLPEPKPTLV
Ga0137397_112536112	3300012685	Vadose Zone Soil	MGAAEVIAFEEVRARKQWSTLRQQLHERLAQWRDTLEQAWHEPPAT*
Ga0137416_111381081	3300012927	Vadose Zone Soil	MGAAEVISCEEIRARQQWSTLRQQLHERFDHWLETLEQAWHAPPAT
Ga0134110_101299811	3300012975	Grasslands Soil	MGAAEVISFEEVRARKQWDALRGQLPTRFDQWLDALEAQLQEPTPS*
Ga0182001_103760552	3300014488	Soil	MGAAEVIAFEEVRARKQWDALRHQLHDRFDQWLDSLEAQLQEPMPGRVPAQCG*
Ga0137418_103428321	3300015241	Vadose Zone Soil	GERHFILPHEESPMGAAEIISFEEIRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0137412_105127772	3300015242	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLQEQLPEPEPTVAQVTETGW
Ga0137403_112837711	3300015264	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRRQLHTRFDQGLDGLEAQLQEPA
Ga0134073_102092261	3300015356	Grasslands Soil	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS*
Ga0134089_103377792	3300015358	Grasslands Soil	MGAAEVISFEEVRARKQWSTLRQQLHARFDQWLDTLEQAWHEPPAT*
Ga0132255_1004358182	3300015374	Arabidopsis Rhizosphere	MGAAEVIAFEEVRARKQWDTLRQQLHARFDQWLDTLEQQWH*
Ga0182036_111611191	3300016270	Soil	MGTAEVITFEEVRARKHWDTLRHQLHERFDRWLDTLETQWHEPPSTLPEVTA
Ga0182033_103659631	3300016319	Soil	MGAAEIISFEDVRARKQWDTLRQALHIRFDEWLDKLEIQLPGAAPTLAQVTEAMWN
Ga0182032_117130232	3300016357	Soil	MGAAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQAWPEPPATLS
Ga0182040_100640114	3300016387	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDAL
Ga0182040_109231021	3300016387	Soil	MGAAEVIEFEEVRARKQWDALRGQLHTRFDQWLNALEAELQEPAPSLAQVTET
Ga0182039_107609771	3300016422	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPST
Ga0184638_10400061	3300018052	Groundwater Sediment	MGCAAEVISLGEVRTRQQWETLRQHLHDRFDQWLDGLETQLPESEPT
Ga0184633_103483202	3300018077	Groundwater Sediment	MGAAEVISFEEVRASKQWDALRRQLHTRFDQWLDGLEAHLQEP
Ga0184612_102158342	3300018078	Groundwater Sediment	MGCAEIISLPEVRARKQWDALRQQLHARFDQWLDGLEEQF
Ga0184627_100339532	3300018079	Groundwater Sediment	MGCAEIISLPEVRARKQWDALRQQLHARFDQWLDGLEEQFQEPDPT
Ga0184646_14293942	3300019259	Groundwater Sediment	MGWAEMISLPEVRARKQWDALRQQLHARFDQWLDGLEEPFQEPEPP
Ga0193704_10482282	3300019867	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS
Ga0194111_105847001	3300020083	Freshwater Lake	ILPHEESPRGTAELISFEEARASTQWDTLRHQLHERFDQWRDTLETPWHELPAT
Ga0194112_106576351	3300020109	Freshwater Lake	RGTAELISFEEARASTQWDTLRHQLHERFDQWRDTLETPWHELPAT
Ga0210379_101813231	3300021081	Groundwater Sediment	KGLPMGWAEMISLPEVRARKQWDALRQQLHARFDQWLDGLEEQFQEPAPP
Ga0187846_103272121	3300021476	Biofilm	MGAAEVIAFEEVRASKQWDTLRHQLHARFDQWLDTLETQWHEP
Ga0222625_12840142	3300022195	Groundwater Sediment	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLQEQLLEPAPTLAQVTETVWHLRHA
Ga0207684_102658012	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAEVISFEEVRARKQCDALRRQLHTHFDQWLDGLEAQLQEPAPT
Ga0207662_112415011	3300025918	Switchgrass Rhizosphere	MGAAEIISFEEVRASKQWDTLRQQLHARFDHWLDTLEQQWHEPPSTLMEVTAT
Ga0207681_101872173	3300025923	Switchgrass Rhizosphere	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDRL
Ga0207689_103392451	3300025942	Miscanthus Rhizosphere	MGAAEIISFEEVRARKQWRTLRQQLHERFDQWLDTLEQAWHEPPATLSE
Ga0209267_10861082	3300026331	Soil	MGCAEIISLPEVRARKQSDALRQQLHARFDQWLDGLEEQFQEPEPT
Ga0209376_10787022	3300026540	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS
Ga0209588_12654702	3300027671	Vadose Zone Soil	MGAAEIISFEEIRARKQWDALRGQLHTRFDQWLDAL
Ga0209814_101030403	3300027873	Populus Rhizosphere	MGCAEIISFDEVRARKQWESRRQQRHARFDQWLDQLEEQWPESEPTLAAVTETVWD
Ga0209465_100114442	3300027874	Tropical Forest Soil	MGGAEIIALSAVRARKQWEVLRPQLHERFDRWLDALAQQWPAPPST
Ga0209481_100045264	3300027880	Populus Rhizosphere	MGAAEVIAFEEVRARRQWDTLRHQLHERFDQWLDTLETQWHEPPST
Ga0209481_106674631	3300027880	Populus Rhizosphere	MGQAEVISLDEVRASKQWVSLRQQLHDYFDQWLDALQAQLP
Ga0207428_101438691	3300027907	Populus Rhizosphere	MGAAEVIAFEEVRARKHWDTLRHQLHACFDQWLDMLE
Ga0209857_10251871	3300027957	Groundwater Sand	MGAAEIISFEEVRARKQWATLRQQLHERFDQWLDTLEQQW
Ga0209853_10887071	3300027961	Groundwater Sand	MGCAAEVISLPEVRASKQWDSLREQLHTRFDQWLDRLEEHLQEPAPTLA
Ga0247818_112796952	3300028589	Soil	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDALEA
Ga0307311_101014001	3300028716	Soil	TGECHFILPHEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS
Ga0307316_102453801	3300028755	Soil	ECHFILPHEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS
Ga0307320_100821261	3300028771	Soil	EVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS
Ga0307296_102234181	3300028819	Soil	HEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS
Ga0308202_10507931	3300030902	Soil	MRAAEIISIEEVRARKQWDTLRQQLHKRFDQWLDTLETQWPEPPSTVS
Ga0308206_10733712	3300030903	Soil	MGAAEVISFEEVRARKQWDALRHQLHERFDQWLDGLEEQLHEPKPTLAQVTETVWN
Ga0308204_100610992	3300031092	Soil	GERHFILPHEESPMGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPSLAQVTTL
Ga0308204_101107622	3300031092	Soil	ISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPS
Ga0308197_101920721	3300031093	Soil	MGYAEIISLPEVRARKQWDLLRQQLHSRFDQWLDGLEEQLPEPEST
Ga0308187_101468912	3300031114	Soil	MGAAEVIAFEEVRARKQWDALRHQLHERFDQWLDGLEEQLHEPKPTLAQVTETVWN
Ga0308187_101511241	3300031114	Soil	MGAAEVISFEEVRARQQWDTLRHQLHERFDQWLDTLETQWHEPPATLS
Ga0306917_110657482	3300031719	Soil	VGCAEIIALAEVRASKQWEVLRQQLHARFDQWLDTLEQQWPEPPSSLPE
Ga0306918_103870092	3300031744	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALETQLQEPAPS
Ga0307473_100657582	3300031820	Hardwood Forest Soil	MGAAEVLAFEEVRARKQWDALRGRLHTRCDQWLDALEAPLQEPAPS
Ga0307473_107814232	3300031820	Hardwood Forest Soil	MGAAEVISFEEVRASKQWDALRGQLHTRFDQWLDELEAQLRAPAPT
Ga0318567_100779503	3300031821	Soil	MGCAAEVISLGEVRAGKQRETLRQHLHDRFDEWLDGLETQLPEAELTLAQVSAT
Ga0318520_107760181	3300031897	Soil	MGAAEVIVCEEVGARKPWSTLRQQLHERFDQGLDSLEQR
Ga0310916_115225391	3300031942	Soil	MGCAAEVISLGEVRARKQGETLRQHLHDRFDQWLDGLETHLPEA
Ga0307409_1000846171	3300031995	Rhizosphere	MGAAEVIAFEEARARKQWTTLRQQLHERFDQWLDTL
Ga0307414_113705291	3300032004	Rhizosphere	MGAAEVIAFEEVRARKQWEALRGQLHIRFDQWLDRWEEQLQEPAPS
Ga0268251_102104201	3300032159	Agave	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPS
Ga0268251_106049351	3300032159	Agave	VGCAEIIALAEVRASKQWEVLRHQLHERFDQWLDTLEQQWPEPPSTLPEVTA
Ga0314798_146864_390_536	3300034673	Soil	MGAAEVISFEEVRARKQWSTLRQQRHERFDQWLDTLERAWPEPPATVSE
Ga0314803_133986_2_145	3300034678	Soil	MGCAAKVISLDEVRARQHWDTLRQHLHDRFDQWLDGLEAQLPEPKPTL
Ga0370541_061754_3_134	3300034680	Soil	MGCAEIISLPEVRARKQWDTLRQQLHERFDQWIDTLEKQLREPP

Hidden Markov Model


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