Metagenome / Metatranscriptome Family F054838

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054838
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	104 residues
Representative Sequence	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADPL
Number of Associated Samples	119
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.73 %
% of genes near scaffold ends (potentially truncated)	24.46 %
% of genes from short scaffolds (< 2000 bps)	79.86 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.770 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.022 % of family members)
Environment Ontology (ENVO)	Unclassified (33.094 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.554 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.43% β-sheet: 0.00% Coil/Unstructured: 68.57%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00565	SNase	43.88
PF00570	HRDC	30.22
PF13361	UvrD_C	13.67
PF00903	Glyoxalase	4.32
PF09851	SHOCT	0.72
PF04030	ALO	0.72
PF01493	GXGXG	0.72
PF13669	Glyoxalase_4	0.72
PF06262	Zincin_1	0.72
PF01565	FAD_binding_4	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.72
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.72

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.77 %
Unclassified	root	N/A	12.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.77 %
Unclassified	root	N/A	12.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.77 %
Unclassified	root	N/A	12.23 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.59 %
Unclassified	root	N/A	12.23 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.59 %
Unclassified	root	N/A	12.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.13 %
Unclassified	root	N/A	12.23 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.88 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	1.44 %
Aeromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	33.09 %
Unclassified	root	N/A	12.23 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.88 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1.44 %
Aeromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.65 %
Unclassified	root	N/A	12.23 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.88 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1.44 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1.44 %
Aeromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	31.65 %
Unclassified	root	N/A	12.23 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.88 %
Actinobacteria bacterium IMCC26256	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	1.44 %
Actinobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1.44 %
Aeromonas diversa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas diversa	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459022\|GZEQPF102FH7E4	Not Available	517	Open in IMG/M
2199352025\|deepsgr__Contig_137764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300000956\|JGI10216J12902_115060725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300004633\|Ga0066395_10680201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300004633\|Ga0066395_10771630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005093\|Ga0062594_103169004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas diversa	515	Open in IMG/M
3300005161\|Ga0066807_1041413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300005167\|Ga0066672_10404865	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005168\|Ga0066809_10051654	Not Available	922	Open in IMG/M
3300005175\|Ga0066673_10907919	Not Available	501	Open in IMG/M
3300005179\|Ga0066684_10348164	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300005181\|Ga0066678_10942263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300005186\|Ga0066676_10401042	Not Available	925	Open in IMG/M
3300005332\|Ga0066388_100002990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10703	Open in IMG/M
3300005332\|Ga0066388_100326076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2182	Open in IMG/M
3300005445\|Ga0070708_100004940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10546	Open in IMG/M
3300005536\|Ga0070697_100035689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4013	Open in IMG/M
3300005540\|Ga0066697_10423197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	771	Open in IMG/M
3300005553\|Ga0066695_10538777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300005554\|Ga0066661_10344012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300005555\|Ga0066692_10498604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300005558\|Ga0066698_10843343	Not Available	590	Open in IMG/M
3300005560\|Ga0066670_10048150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2195	Open in IMG/M
3300005561\|Ga0066699_10197116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1401	Open in IMG/M
3300005575\|Ga0066702_10349022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	900	Open in IMG/M
3300005576\|Ga0066708_10767004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300005598\|Ga0066706_11067643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300005713\|Ga0066905_100263689	Not Available	1332	Open in IMG/M
3300005713\|Ga0066905_100578220	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005764\|Ga0066903_100055682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4877	Open in IMG/M
3300005937\|Ga0081455_10131160	All Organisms → cellular organisms → Bacteria	1959	Open in IMG/M
3300006031\|Ga0066651_10183808	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300006034\|Ga0066656_10622078	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006046\|Ga0066652_101160434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300006049\|Ga0075417_10713443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300006575\|Ga0074053_11051353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	998	Open in IMG/M
3300006576\|Ga0074047_11878161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	513	Open in IMG/M
3300006791\|Ga0066653_10154419	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300006794\|Ga0066658_10216874	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300006797\|Ga0066659_10776371	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300006800\|Ga0066660_10394445	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300006806\|Ga0079220_10386096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300006844\|Ga0075428_100041293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5073	Open in IMG/M
3300006844\|Ga0075428_100411288	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300006845\|Ga0075421_100079692	All Organisms → cellular organisms → Bacteria	4131	Open in IMG/M
3300006845\|Ga0075421_100471426	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300006846\|Ga0075430_100165432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300006954\|Ga0079219_11573335	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300009088\|Ga0099830_11351272	Not Available	592	Open in IMG/M
3300009089\|Ga0099828_10324263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387	Open in IMG/M
3300009090\|Ga0099827_10963724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300009094\|Ga0111539_10765198	Not Available	1124	Open in IMG/M
3300009100\|Ga0075418_11735536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300009147\|Ga0114129_11460786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300009156\|Ga0111538_10167426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2791	Open in IMG/M
3300009162\|Ga0075423_10008074	Not Available	9972	Open in IMG/M
3300009789\|Ga0126307_10003407	All Organisms → cellular organisms → Bacteria	10865	Open in IMG/M
3300009840\|Ga0126313_10471311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300009840\|Ga0126313_11611477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300010036\|Ga0126305_10512750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300010037\|Ga0126304_10157539	Not Available	1472	Open in IMG/M
3300010038\|Ga0126315_10959418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300010039\|Ga0126309_10778255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300010040\|Ga0126308_10492746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300010042\|Ga0126314_10751033	Not Available	716	Open in IMG/M
3300010043\|Ga0126380_10209491	Not Available	1313	Open in IMG/M
3300010044\|Ga0126310_11623213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300010046\|Ga0126384_10307656	Not Available	1305	Open in IMG/M
3300010047\|Ga0126382_10208270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1397	Open in IMG/M
3300010166\|Ga0126306_10062959	All Organisms → cellular organisms → Bacteria	2599	Open in IMG/M
3300010166\|Ga0126306_10487852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	973	Open in IMG/M
3300010329\|Ga0134111_10019896	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2253	Open in IMG/M
3300010333\|Ga0134080_10525481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300010335\|Ga0134063_10069890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1561	Open in IMG/M
3300010337\|Ga0134062_10509195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300010358\|Ga0126370_11730457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300010359\|Ga0126376_11420065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300010361\|Ga0126378_11357949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300010366\|Ga0126379_10027678	All Organisms → cellular organisms → Bacteria	4371	Open in IMG/M
3300012198\|Ga0137364_10393178	Not Available	1037	Open in IMG/M
3300012198\|Ga0137364_10892520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300012199\|Ga0137383_10404034	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300012201\|Ga0137365_10114174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2031	Open in IMG/M
3300012201\|Ga0137365_11072047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300012204\|Ga0137374_10034621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5451	Open in IMG/M
3300012204\|Ga0137374_10106025	All Organisms → cellular organisms → Bacteria	2633	Open in IMG/M
3300012204\|Ga0137374_10674466	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012204\|Ga0137374_10888914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300012206\|Ga0137380_11057410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300012209\|Ga0137379_10998818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300012350\|Ga0137372_10545402	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012351\|Ga0137386_10439667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300012353\|Ga0137367_10933305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012354\|Ga0137366_10345024	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300012355\|Ga0137369_10195765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	1566	Open in IMG/M
3300012355\|Ga0137369_10833819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300012357\|Ga0137384_10089563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium	2561	Open in IMG/M
3300012357\|Ga0137384_10654883	Not Available	855	Open in IMG/M
3300012358\|Ga0137368_10059305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3180	Open in IMG/M
3300012358\|Ga0137368_10589870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300012359\|Ga0137385_10108854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2454	Open in IMG/M
3300012360\|Ga0137375_10062605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3980	Open in IMG/M
3300012360\|Ga0137375_10790352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300012360\|Ga0137375_11453181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300012532\|Ga0137373_10639479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300012685\|Ga0137397_11239719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300012927\|Ga0137416_10400914	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300012984\|Ga0164309_10836816	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300015356\|Ga0134073_10431524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300018073\|Ga0184624_10303967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300018076\|Ga0184609_10292084	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300018469\|Ga0190270_10908394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300018482\|Ga0066669_10264715	All Organisms → cellular organisms → Bacteria	1370	Open in IMG/M
3300022756\|Ga0222622_10028749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2936	Open in IMG/M
3300025910\|Ga0207684_10018383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	5984	Open in IMG/M
3300025910\|Ga0207684_10280737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300025928\|Ga0207700_10448710	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300026295\|Ga0209234_1027595	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300026301\|Ga0209238_1087919	Not Available	1071	Open in IMG/M
3300026309\|Ga0209055_1237630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	561	Open in IMG/M
3300026548\|Ga0209161_10535502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300026552\|Ga0209577_10407725	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300027873\|Ga0209814_10406437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300027880\|Ga0209481_10428049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300027909\|Ga0209382_10072975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4053	Open in IMG/M
3300027909\|Ga0209382_10135690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinobacteria bacterium IMCC26256	2861	Open in IMG/M
3300027909\|Ga0209382_10865373	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300028047\|Ga0209526_10138128	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300028536\|Ga0137415_10126622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2399	Open in IMG/M
3300028587\|Ga0247828_10938904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300028787\|Ga0307323_10081394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1156	Open in IMG/M
3300028807\|Ga0307305_10052490	Not Available	1877	Open in IMG/M
3300028811\|Ga0307292_10331689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300028814\|Ga0307302_10091797	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300028819\|Ga0307296_10710490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300028824\|Ga0307310_10550594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300028878\|Ga0307278_10077319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1500	Open in IMG/M
3300028881\|Ga0307277_10185547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	909	Open in IMG/M
3300033550\|Ga0247829_10105766	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.77%
Host-Associated	Host-Associated	12.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.61%
Plants	Host-Associated → Plants	12.23%
Aquatic	Environmental → Aquatic	2.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.51%
Sediment	Environmental → Aquatic → Sediment	2.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.16%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.51%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.16%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459022	Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA2_06936110	2170459022	Grass Soil	MAWSRFPVFPSDDGWPYPDLPSGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTRTRDVLGGAIDKLRTRLTTDTL
deepsgr_02238890	2199352025	Soil	VVELPGLPLRRRLAVPRSPRGFDDPAADDEVDLDALELRVDPHAFESLDPTEYALVARRFGFNGPATSMKDLAHELGWSHAQTRDVLGGAIDKLRTRLTADPF
JGI10216J12902_1150607252	3300000956	Soil	MSWSSFPVFPSDDGWPYPDLPRGVDDPATDDEVDLDALELRADPHAFECLSPAEYELVARRFGLHGPPMSMKQLSHDLGWSHTQTRDVLGRAIDKLRVRLTGDSL*
Ga0066395_106802011	3300004633	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPAGIEDPAAVDEIDLDALELRVDPHAFECLDPVEYDLVIRRFGFDGPAASMKDLAHDHGWSHTHTRD
Ga0066395_107716301	3300004633	Tropical Forest Soil	PPCSRPLTGRSASATMRSGTGSGSDAMAWSSFPVFPTDDGWPYPDLPGGFEDPAAADDMDLDALELRVDPHCFECLDPVEYDLVAHRFGFAGPAMSMKDLAHEHGWSHTHTREVLGGAIDKLRSRLTADSA*
Ga0062594_1031690041	3300005093	Soil	MAWSSFPVFPSDDGWPYPDLPAGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066807_10414132	3300005161	Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFESLDPTEYALVARRFGFNGPATSMKDLAHELGWSHAQTRDVLGGAIDKLRTRLTADPF*
Ga0066672_104048651	3300005167	Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHDLGWSHTQTRDMLGGAIDKLRTRLTAESF*
Ga0066809_100516541	3300005168	Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFESLDPTEYALVARRFGFNGPATSMKDLAHELGWSHAQTR
Ga0066673_109079191	3300005175	Soil	MAWSSFPVFPSDDGWPYPDLPSGFDDPASDDEVDLDALELRADPRAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLT
Ga0066684_103481642	3300005179	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSGATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066678_109422632	3300005181	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGAATSMKDLAHERGWSHTQTRDV
Ga0066676_104010422	3300005186	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVVRRFGFNGSGATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066388_1000029908	3300005332	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAAVEEIDLDALELRVDPHCFDCLDPVEYDVVIRRFGFAGPAASMKDLAHVHGWSRTHTRDVLGGAIDKLRTRLTPDSG*
Ga0066388_1003260764	3300005332	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGLEDPAAVEEIDLDALELRVDPHAFECLDPVEYDLVIRRFGFDGPATSMKDLAHDHGWSHTHTRDVLGGAIDKLRTRLTPDSG*
Ga0070708_1000049405	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAWSSFPVFPSDDGWPYPDLPSGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0070697_1000356894	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAWSSFPVFPSDDGWPYPDLPSGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066697_104231972	3300005540	Soil	MAWSSFPVFPSDDGWPYPDLPSGFDDPASDDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTRTRDVLGGAIDKLRTRLTTDTL*
Ga0066695_105387772	3300005553	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQT
Ga0066661_103440121	3300005554	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYDLVARRFGFNGSATSMKDLAHQLGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066692_104986042	3300005555	Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066698_108433431	3300005558	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDATEYELVARRFGFNGSGATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066670_100481502	3300005560	Soil	MAWSSFPVFPSDDGWPYPDLPSGFDDPASDDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066699_101971161	3300005561	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYDLVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066702_103490221	3300005575	Soil	VFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHDLGWSHTQTRDVLGVAIDKLRTRLTADFS*
Ga0066708_107670042	3300005576	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKGLAHDLGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066706_110676432	3300005598	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGAATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066905_1002636893	3300005713	Tropical Forest Soil	MAWSSFPVFPTDDGWPYPDLPGGFEDPAAADDMDLDALELRVDPHCFECLDPVEYDLVAHRFGFAGPAMSMKDLAHEHGWSHTHTREVLGGAIDKLRSRLTADSA*
Ga0066905_1005782202	3300005713	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGSDDPAAVEEIDLDALELRLNPHCFECLDPVEYDVVIRRFGFSGPAASMKDLAHDRGWSHTHTREVLGGAIDKLRTRLTPESG*
Ga0066903_1000556824	3300005764	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAAVDETDLDALELRVDPHCFECLDPVEYDLVIRRFGFDGPAASMKDLAHDHGWSHTHTREVLGGAIDKLRTRLTPDAG*
Ga0081455_101311602	3300005937	Tabebuia Heterophylla Rhizosphere	MAWSSFPVFPSDDGWPYPDLPGGFDDPAAVDDVDLDVLELRVDPHCFECLDPVEYDVVIRRFGFSGPAASMKDLAHARGWSHTHTREVLGGAIDKLRTRLTPDSG*
Ga0066651_101838082	3300006031	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHDLGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066656_106220782	3300006034	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVVRRFGFNGSGATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066652_1011604342	3300006046	Soil	MAWSSFPVFPSDDGWPYPDLPSGFDDPASDDEVDLDVLELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0075417_107134431	3300006049	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPF*
Ga0074053_110513532	3300006575	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0074047_118781611	3300006576	Soil	LFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFESLDPTEYALVARRFGFNGPATSMKDLAHELGWSHAQTRDVLGGAIDKLRTRLTADPF*
Ga0066653_101544192	3300006791	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPATDDEVDLDALELRADPHAFECLDPTEYELGARRFGFNGSGATSMKDLARELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0066658_102168742	3300006794	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLARELGWSHTQTRDVLGGAIDKLRTRLTADFS*
Ga0066659_107763712	3300006797	Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0066660_103944452	3300006800	Soil	MAWSSFPVFPSDDGWPYPDLPSGFDDPASDDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0079220_103860962	3300006806	Agricultural Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHTFECLDPTEYELVARRFGFNGSATSMKDLAHERGWSHTHTRDVLGGAIDKLRTRLTTDTL*
Ga0075428_1000412934	3300006844	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHEHGWSHTQTRDVLGGAIDKLRTRLTADPL*
Ga0075428_1004112882	3300006844	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPA*
Ga0075421_1000796924	3300006845	Populus Rhizosphere	MAWSSLPVFPSDDGWPYPDLPGGVDDPAADDEVDLDALELRADGHAFEGLSPTEYELVARRFGLHGPPASMKELSHGLGWSHSETRDVLGRAIDKLRVRLTPDSA*
Ga0075421_1004714261	3300006845	Populus Rhizosphere	SATMRARHRQRSDAMAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPF*
Ga0075430_1001654322	3300006846	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPA*
Ga0079219_115733352	3300006954	Agricultural Soil	MAWSSFPVFPSDDGWPYPDLPAGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDARSMKDLAHERGWSHTHTRDVLGGAIDKLRTRLTTDTL*
Ga0099830_113512721	3300009088	Vadose Zone Soil	PTDDGWPYPDLPRGVDDPAADDEVDLDVLELQADRHAFESLSPTEYELVARRFGLHGPAASMKELSHELGWSHTETRDVLGRAIDKLRIRLTADGL*
Ga0099828_103242633	3300009089	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPRGVDDPAADDEVDLDVLELQADRHAFESLSPTEYELVARRFGLHGPAASMKELSHELGWSHTETRDMLGRAIDRLRIRLTADGL*
Ga0099827_109637242	3300009090	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDATGRDLIADVPDLDALELRADPHAFECLDPTEYELVARRFGFSGAATSMKDLAHERGWSRTQTRDVLGGAIDKLRTRLTTDTL*
Ga0111539_107651981	3300009094	Populus Rhizosphere	AMAWSSFPVFPSDDGWPYPDLPAGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0075418_117355362	3300009100	Populus Rhizosphere	FPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPA*
Ga0114129_114607861	3300009147	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVNPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPF*
Ga0111538_101674263	3300009156	Populus Rhizosphere	MAWSSFPVFPSDDGWPYPDLPAGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDATSMKDLAHELGWSHTQTRDVLGGAID
Ga0075423_100080749	3300009162	Populus Rhizosphere	MAWSSFPVFPSDDGWPYPDLPAGFDDPAADDDVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0126307_100034077	3300009789	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFECLDTTEYELVARRFGFNGPAASMKDLAREYGWSHAQTRDVLGGAIDKLRTRLTADSF*
Ga0126313_104713112	3300009840	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHERGWSHSQTRDVLGAAIDKLRTRLTADTV*
Ga0126313_116114772	3300009840	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFESLDPIEYQLVTRRFGFNGPAMSMKDLAHERGWSHTQTRDVLGAAIDKLRTRLTADTV*
Ga0126305_105127502	3300010036	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFDSLDPIEYQLVTRRFGFNGPVTSMKDLAREYGWSHAQTRDVLGGAIDKLRTRLTADSF*
Ga0126304_101575392	3300010037	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADTV*
Ga0126315_109594182	3300010038	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDATEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDV
Ga0126309_107782551	3300010039	Serpentine Soil	MAWSSLPVFPSDDGWPYPDLPGGVDDPAADDEVDLDALELRADGHAFESLSPTEYELVARRFGLHGPPASMKELSHEMGWSHTETRDVLGRAIDKLRVRLTPDTV*
Ga0126308_104927462	3300010040	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFECLDSTEYELVARRFGFNGPAASMKDLAREYGWSHAQTRDVLGGAIDKLRTRLTADSF*
Ga0126314_107510332	3300010042	Serpentine Soil	DDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFECLDTTEYELVARRFGFNGPAASMKDLAREYGWSHAQTRDVLGGAIDKLRTRLTADSF*
Ga0126380_102094912	3300010043	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGSDDPAAVEEIDLDALELRLNPHCFECLDPVEYDVVIRRFGFFGPAASMKDLAHDRGWSHTHTREVLGGAIDKLRTRLTPESG*
Ga0126310_116232132	3300010044	Serpentine Soil	FPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFESLDPIEYQLVTRRFGFNGPAMSMKDLAHERGWSHTQTRDVLGAAIDKLRTRLTADTV*
Ga0126384_103076562	3300010046	Tropical Forest Soil	MAWSSFPVFPTDEGWPYPDLPGGFEDPAAADDMDLDALELRVDPHCFECLDPVEYDLVAHRFGFAGPAMSMKDLAHEHGWSHTHTREVLGGAIDKLRSRLTADSA*
Ga0126382_102082703	3300010047	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGSDDPAAVEEIDLDALELRLNPHCFECLDPVEYEIVIRRFGFSGPAASMKDLAHDRGWSHTHTREVLGGAIDKLRTRLTPESG*
Ga0126306_100629594	3300010166	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPADADEVDLDALELRADPHAFESLDPIEYQLVTRRFGFNGPAMSMKDLAHELGWSHTQTRDVLGAAIDKLRTRLTADTV*
Ga0126306_104878522	3300010166	Serpentine Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHERGWSHSQTRDVLGAAIAKLRTRLTADTV*
Ga0134111_100198961	3300010329	Grasslands Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLARELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0134080_105254811	3300010333	Grasslands Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHDLGWSHTQTR
Ga0134063_100698902	3300010335	Grasslands Soil	MAWSSFPVFPFDDGWPYPDLLGGFDDPAADDEVDLDALELRADPHAFECLSATEYDLVARRFGFNGSGATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0134062_105091952	3300010337	Grasslands Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGAATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESI*
Ga0126370_117304571	3300010358	Tropical Forest Soil	MAWSSFPVFPSDDGWPYPDLPAGIEDPAAVDEIDLDALELRVDPHAFECLDPVEYDLVIRRFGFDGPAASMKDLAHDHGWSHTHTRDVLGGAIDKLRTRLTPDSG*
Ga0126376_114200652	3300010359	Tropical Forest Soil	MAWSSFPVFPTVDGWPYPDLPGGFEDPAAADDMDLDALELRVDPHCFECLDPVEYDLVAHRFGFAGPAMSMKDLAHEHGWSHTHTREVLGGAIDKLRSRLTADSA*
Ga0126378_113579491	3300010361	Tropical Forest Soil	GSDAMAWSSFPVFPTDDGWPYPDLPGGFEDPAAADDMDLDALELRVDPHCFECLDPVEYDLVAHRFGFAGPAMSMKDLAHEHGWSHTHTRDVLGGAIDKLRSRLTADSA*
Ga0126379_100276785	3300010366	Tropical Forest Soil	MAWSSFPVFPTDDGWPYPDLPGGFEDPAAADDMDLDALELRVDPHCFECLDPVEYDLVAHRFGFAGPAMSMKDLAHEHGWSHTHTRDVLGGAIDKLRSRLTADSA*
Ga0137364_103931781	3300012198	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDVPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0137364_108925202	3300012198	Vadose Zone Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKELAHERGWSHTQTRDVLGGAIDKLRTRLTADFS*
Ga0137383_104040342	3300012199	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTADTL*
Ga0137365_101141741	3300012201	Vadose Zone Soil	MSWSSFPVFPSDDGWPYPDLPRGVDDPATDDEVDLDALELRADPHAFECLSPAEYELVARRFGLHGPPMSMKQLSHDLGWSHTQTRDVLGRAIDKLRVRLTGDTL*
Ga0137365_110720472	3300012201	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYQLVARRFGFNGSAATSMKDLAHELGWSRTRTRDVLGGAIDKLRTRLTSDTL*
Ga0137374_100346215	3300012204	Vadose Zone Soil	MTAWSNFPVFPSDDGWPYPDLPQGADDPPTDDDVDLDALELRADPHAFECLNPTEYELITRRFGLYGPATSMKDLAHDLGWSHAETRDVLGRAIDKLRTRLTADTV*
Ga0137374_101060251	3300012204	Vadose Zone Soil	MAAWSSFPVFPSDDGWPYPDLPQGADDPPTDDDVDLDVLELRADPHAFECLNPTEYELVTRRFGLYGPATSMKDLAHDLGWSHAETRDVLGGAIDKLRTRLTADTI*
Ga0137374_106744662	3300012204	Vadose Zone Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADFS*
Ga0137374_108889141	3300012204	Vadose Zone Soil	MSWSSFPVFPSDDGWPYPDLPRGVDDPATDDEVDLDALELRADPHAFECLSPAEYELVARRFGLHGPPMSMKQLSHDLGWSHTQPRDVLGRAIDKLRVRLTGDTR*
Ga0137380_110574102	3300012206	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0137379_109988182	3300012209	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYQLVARRFGFNGSAATSMKDLAHELGWSHTRTRDVLGGAIDKLRTRLTSDTL*
Ga0137372_105454022	3300012350	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYQLVARRFGFNGSAATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0137386_104396672	3300012351	Vadose Zone Soil	MRAQHRQWSDAMAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0137367_109333051	3300012353	Vadose Zone Soil	MSWSSFPVFPSDDGWPYPDLPRGVDDPATDDEVDLDALELRADPHAFECLSPAEYELVARRFGLHGPPMSMKQLSHDLGWSHTQTREVLGRAI
Ga0137366_103450242	3300012354	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSAATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTSDTL*
Ga0137369_101957652	3300012355	Vadose Zone Soil	MAAWSSFPVFPSDDGWPYPDLPQGADDPPTDDDVDLDVLELRADPHAFECLNPTEYELVTRRFGLYGPATSMKDLAHDLGWSHAETRDVLGGAIDKLRTRLTADTV*
Ga0137369_108338192	3300012355	Vadose Zone Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0137384_100895632	3300012357	Vadose Zone Soil	MAWSSFPVFPTDDGWPYPDLPGGIDDPAADEQIDLDVLELQADRHAFECLNPTEYELVARRFGLHGPAMSMKDLAHDLGWSHGQTRDVLGRAIDKLRTRLSADSL*
Ga0137384_106548831	3300012357	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVL
Ga0137368_100593052	3300012358	Vadose Zone Soil	MAAWSSFPVFPSDDGWPYPDLPQGADDPPTDDDVDLDVLELRADPPAFECLNPTEYELVTRRFGLYGPATSMKDLAHDLGWSHAETRDVLGGAIDKLRTRLTADTV*
Ga0137368_105898701	3300012358	Vadose Zone Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFECLDPTEYQLVARRFGFNGPAASMKELAREHGWSHAQTRDVLGGAIDKLRTRLTADTL*
Ga0137385_101088542	3300012359	Vadose Zone Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYQLVARRFGFNGSAATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTADFS*
Ga0137375_100626054	3300012360	Vadose Zone Soil	MTAWSNFPVFPSDDGWPYPDLPQGADDPPTDDDVDLDALELRADPHAFECLNPTEYELITRRFGLYGPATSMKDLAHDLGWSHAETRD
Ga0137375_107903522	3300012360	Vadose Zone Soil	HRSDAMAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADFS*
Ga0137375_114531811	3300012360	Vadose Zone Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPAASMKELAREHGWSHAQTRDVLGGAIDKLRTRLTADTL*
Ga0137373_106394792	3300012532	Vadose Zone Soil	MRVGHRQWSDARAWSSFPVFPTDDGWPYPDLPRGFDDPATDDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPAASMKELAREHGWSHAQTRDVLGGAIDKLRTRLTSDTL*
Ga0137397_112397192	3300012685	Vadose Zone Soil	FPSDDGWPYPDLPGGVDDPAADDEVDLDALELRANTHAFECLSHAEYELVARRFGLDGPPMSMKELSHDLGCSHTETRDMLGRAIDKLRVRLTPDSV*
Ga0137416_104009142	3300012927	Vadose Zone Soil	MTWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSPMSMKDLAHDLGWSHTQTRDVLGGAIDKLRTRLTAESF*
Ga0164309_108368162	3300012984	Soil	MTWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL*
Ga0134073_104315241	3300015356	Grasslands Soil	DGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSGATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTADFS*
Ga0184624_103039671	3300018073	Groundwater Sediment	DAMAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADPF
Ga0184609_102920842	3300018076	Groundwater Sediment	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADPF
Ga0190270_109083942	3300018469	Soil	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDATEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0066669_102647152	3300018482	Grasslands Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSGATSMKDLAHELGWSHTQTREVLGGAIDKLRTRLTTDTL
Ga0222622_100287492	3300022756	Groundwater Sediment	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADPL
Ga0207684_100183834	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAWSSFPVFPSDDGWPYPDLPSGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL
Ga0207684_102807372	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAWSSFPVFPSDDGWPYPDLPAGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSDATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL
Ga0207700_104487102	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL
Ga0209234_10275952	3300026295	Grasslands Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHDLGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0209238_10879191	3300026301	Grasslands Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0209055_12376302	3300026309	Soil	MAWSSFPVFPSDDGWPYPDLPRGFDDPAADDEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTA
Ga0209161_105355021	3300026548	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYELVARRFGFNGAATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTTDTL
Ga0209577_104077252	3300026552	Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAAADEVDLDALELRADPHAFECLSATEYELVARRFGFNGSATSMKDLAHDLGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0209814_104064372	3300027873	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPF
Ga0209481_104280491	3300027880	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHEHGWSHTQTRDVLGGAIDKLRTRLTADPL
Ga0209382_100729753	3300027909	Populus Rhizosphere	LVELPGLPHRRRLAVPRFPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHEHGWSHTQTRDVLGGAIDKLRTRLTADPL
Ga0209382_101356902	3300027909	Populus Rhizosphere	MAWSSLPVFPSDDGWPYPDLPGGVDDPAADDEVDLDALELRADGHAFEGLSPTEYELVARRFGLHGPPASMKELSHGLGWSHSETRDVLGRAIDKLRVRLTPDSA
Ga0209382_108653732	3300027909	Populus Rhizosphere	MAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPA
Ga0209526_101381283	3300028047	Forest Soil	MAWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFECLDPTEYDLVARRFGFNGSAATSMKDLAHELGWSHTQTRDVLGGAIDKLRTRLTTDTL
Ga0137415_101266222	3300028536	Vadose Zone Soil	MTWSSFPVFPSDDGWPYPDLPGGFDDPAADDEVDLDALELRADPHAFACLSATEYELVARRFGFNGSPMSMKDLAHDLGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0247828_109389042	3300028587	Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPVEYELVARRFGFNGPVTSMKDLAHQQGWSHTQTRDVLGGAIDKLRTRLTADPF
Ga0307323_100813943	3300028787	Soil	AGTGVNAMAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0307305_100524903	3300028807	Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0307292_103316891	3300028811	Soil	PYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0307302_100917972	3300028814	Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTADPF
Ga0307296_107104901	3300028819	Soil	AMAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0307310_105505942	3300028824	Soil	FPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0307278_100773191	3300028878	Soil	SATMRERHRHRSDAMAWSSFPVFPTDDGWPYPDLPRGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFNGPATSMKDLAHERGWSHTQTRDVLGGAIDKLRTRLTAESF
Ga0307277_101855472	3300028881	Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPTEYELVARRFGFIGPATSMKDLAHERGWSRTQTRDVLGGAIDKLRTRLTAESF
Ga0247829_101057662	3300033550	Soil	MAWSSFPVFPTDDGWPYPDLPGGFDDPAADDEVDLDALELRVDPHAFECLDPVEYELVARRFGFNGPVTSMKDLAHAHGWSHTQTRDVLGGAIDKLRTRLTADPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054838

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences