Metagenome Family F054726

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054726
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	96 residues
Representative Sequence	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Number of Associated Samples	104
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.26 %
% of genes near scaffold ends (potentially truncated)	32.37 %
% of genes from short scaffolds (< 2000 bps)	70.50 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.899 % of family members)
Environment Ontology (ENVO)	Unclassified (58.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.80% β-sheet: 0.00% Coil/Unstructured: 31.20%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.13.1.2: Rhodopsin-like	d5dysa_	5dys	0.73671
f.13.1.0: automated matches	d4hyja_	4hyj	0.7248
a.238.1.1: BAR domain	d2q13a1	2q13	0.71262
f.13.1.0: automated matches	d6tk6a_	6tk6	0.70764
f.13.1.0: automated matches	d6lm1a1	6lm1	0.70708

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00106	adh_short	14.39
PF00903	Glyoxalase	12.95
PF05494	MlaC	9.35
PF00528	BPD_transp_1	7.91
PF13561	adh_short_C2	6.47
PF13419	HAD_2	5.76
PF12773	DZR	3.60
PF13505	OMP_b-brl	3.60
PF13242	Hydrolase_like	2.16
PF00313	CSD	1.44
PF05425	CopD	1.44
PF02211	NHase_beta	1.44
PF00072	Response_reg	0.72
PF13191	AAA_16	0.72
PF14520	HHH_5	0.72
PF01063	Aminotran_4	0.72
PF00741	Gas_vesicle	0.72
PF02979	NHase_alpha	0.72
PF03412	Peptidase_C39	0.72
PF02694	UPF0060	0.72
PF01904	DUF72	0.72
PF02518	HATPase_c	0.72
PF12911	OppC_N	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	9.35
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.44
COG1276	Putative copper export protein	Inorganic ion transport and metabolism [P]	1.44
COG1742	Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily	General function prediction only [R]	0.72
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	46.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.88 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	46.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.88 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	46.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.16 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	21.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	0.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	20.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.72 %
Candidatus Rokubacteria bacterium 13_1_40CM_68_15	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10000922	All Organisms → cellular organisms → Bacteria → Proteobacteria	8840	Open in IMG/M
3300002558\|JGI25385J37094_10084998	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300002560\|JGI25383J37093_10001863	All Organisms → cellular organisms → Bacteria → Proteobacteria	5996	Open in IMG/M
3300002562\|JGI25382J37095_10047821	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300002562\|JGI25382J37095_10053730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1543	Open in IMG/M
3300002912\|JGI25386J43895_10043240	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300002916\|JGI25389J43894_1064565	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300003203\|JGI25406J46586_10058037	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300004267\|Ga0066396_10120627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	502	Open in IMG/M
3300004268\|Ga0066398_10057071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	807	Open in IMG/M
3300005166\|Ga0066674_10000396	All Organisms → cellular organisms → Bacteria	13014	Open in IMG/M
3300005166\|Ga0066674_10009785	All Organisms → cellular organisms → Bacteria → Proteobacteria	3930	Open in IMG/M
3300005167\|Ga0066672_10699235	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005175\|Ga0066673_10016348	All Organisms → cellular organisms → Bacteria	3323	Open in IMG/M
3300005178\|Ga0066688_10073611	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300005178\|Ga0066688_10149483	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300005180\|Ga0066685_10063000	All Organisms → cellular organisms → Bacteria → Proteobacteria	2413	Open in IMG/M
3300005180\|Ga0066685_10112618	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300005181\|Ga0066678_10038707	All Organisms → cellular organisms → Bacteria	2654	Open in IMG/M
3300005181\|Ga0066678_10148407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1465	Open in IMG/M
3300005187\|Ga0066675_10100613	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300005451\|Ga0066681_10110596	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300005454\|Ga0066687_10120467	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300005540\|Ga0066697_10310283	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005549\|Ga0070704_101716326	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300005555\|Ga0066692_10040878	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300005555\|Ga0066692_10076485	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300005556\|Ga0066707_10104093	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300005559\|Ga0066700_10197681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1387	Open in IMG/M
3300005566\|Ga0066693_10076706	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005569\|Ga0066705_10827633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300005576\|Ga0066708_10229450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1174	Open in IMG/M
3300005586\|Ga0066691_10045559	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300005598\|Ga0066706_10064444	All Organisms → cellular organisms → Bacteria → Proteobacteria	2538	Open in IMG/M
3300005764\|Ga0066903_102858070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	937	Open in IMG/M
3300006031\|Ga0066651_10031493	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300006032\|Ga0066696_10054427	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300006034\|Ga0066656_10555656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300006046\|Ga0066652_100102857	All Organisms → cellular organisms → Bacteria	2308	Open in IMG/M
3300006049\|Ga0075417_10091084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1373	Open in IMG/M
3300006794\|Ga0066658_10074171	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300006796\|Ga0066665_10412712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1115	Open in IMG/M
3300006845\|Ga0075421_100292867	All Organisms → cellular organisms → Bacteria	1982	Open in IMG/M
3300006847\|Ga0075431_100353926	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300006903\|Ga0075426_10574032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	841	Open in IMG/M
3300006903\|Ga0075426_10655676	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300007255\|Ga0099791_10004136	All Organisms → cellular organisms → Bacteria → Proteobacteria	5937	Open in IMG/M
3300007255\|Ga0099791_10425510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	641	Open in IMG/M
3300007258\|Ga0099793_10028554	All Organisms → cellular organisms → Bacteria	2350	Open in IMG/M
3300007265\|Ga0099794_10770233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300009012\|Ga0066710_101373814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1095	Open in IMG/M
3300009012\|Ga0066710_104126596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	543	Open in IMG/M
3300009012\|Ga0066710_104566611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	517	Open in IMG/M
3300009012\|Ga0066710_104795884	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300009137\|Ga0066709_101358322	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1037	Open in IMG/M
3300009137\|Ga0066709_102006471	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300009137\|Ga0066709_104676291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_68_15	501	Open in IMG/M
3300009147\|Ga0114129_11205183	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300009691\|Ga0114944_1403074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	576	Open in IMG/M
3300009792\|Ga0126374_11133923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	622	Open in IMG/M
3300010046\|Ga0126384_11241349	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	689	Open in IMG/M
3300010047\|Ga0126382_10199873	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300010303\|Ga0134082_10164064	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	902	Open in IMG/M
3300010325\|Ga0134064_10152081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	801	Open in IMG/M
3300010329\|Ga0134111_10127584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	993	Open in IMG/M
3300010335\|Ga0134063_10066198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1601	Open in IMG/M
3300010335\|Ga0134063_10107347	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1271	Open in IMG/M
3300010336\|Ga0134071_10342858	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	754	Open in IMG/M
3300010336\|Ga0134071_10486059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	636	Open in IMG/M
3300010359\|Ga0126376_10020776	All Organisms → cellular organisms → Bacteria	4293	Open in IMG/M
3300010359\|Ga0126376_10517061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1109	Open in IMG/M
3300010360\|Ga0126372_12069690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	617	Open in IMG/M
3300010362\|Ga0126377_11210910	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	826	Open in IMG/M
3300011271\|Ga0137393_11066386	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300012203\|Ga0137399_10192475	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300012208\|Ga0137376_10344394	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300012211\|Ga0137377_11294552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300012356\|Ga0137371_11035639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	620	Open in IMG/M
3300012359\|Ga0137385_10035409	All Organisms → cellular organisms → Bacteria → Proteobacteria	4476	Open in IMG/M
3300012361\|Ga0137360_10610275	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	934	Open in IMG/M
3300012685\|Ga0137397_10093639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2196	Open in IMG/M
3300012685\|Ga0137397_10309177	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1178	Open in IMG/M
3300012922\|Ga0137394_10320750	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300012922\|Ga0137394_11424277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	553	Open in IMG/M
3300012923\|Ga0137359_10586642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	979	Open in IMG/M
3300012925\|Ga0137419_10842359	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300012927\|Ga0137416_12113174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300012929\|Ga0137404_10074852	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300012930\|Ga0137407_10030342	All Organisms → cellular organisms → Bacteria	4205	Open in IMG/M
3300012972\|Ga0134077_10010960	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300012975\|Ga0134110_10057197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300012976\|Ga0134076_10035263	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300012976\|Ga0134076_10039672	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1747	Open in IMG/M
3300014150\|Ga0134081_10042376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1345	Open in IMG/M
3300014150\|Ga0134081_10149046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	768	Open in IMG/M
3300015241\|Ga0137418_10014773	All Organisms → cellular organisms → Bacteria	7216	Open in IMG/M
3300015359\|Ga0134085_10032220	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300017654\|Ga0134069_1304827	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300017657\|Ga0134074_1093045	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300017659\|Ga0134083_10002942	All Organisms → cellular organisms → Bacteria	5203	Open in IMG/M
3300017659\|Ga0134083_10100443	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1140	Open in IMG/M
3300017659\|Ga0134083_10131023	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300018431\|Ga0066655_10002011	All Organisms → cellular organisms → Bacteria	7542	Open in IMG/M
3300018431\|Ga0066655_10006805	All Organisms → cellular organisms → Bacteria → Proteobacteria	4744	Open in IMG/M
3300018431\|Ga0066655_10681610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300018468\|Ga0066662_10062090	All Organisms → cellular organisms → Bacteria	2451	Open in IMG/M
3300018468\|Ga0066662_10302743	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300018468\|Ga0066662_10628912	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1010	Open in IMG/M
3300018468\|Ga0066662_12387795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300018482\|Ga0066669_10003149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7045	Open in IMG/M
3300018482\|Ga0066669_10353485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1222	Open in IMG/M
3300018482\|Ga0066669_10892313	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	795	Open in IMG/M
3300019789\|Ga0137408_1405736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1919	Open in IMG/M
3300019789\|Ga0137408_1405737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1752	Open in IMG/M
3300022563\|Ga0212128_10541651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	708	Open in IMG/M
3300025149\|Ga0209827_11094235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	603	Open in IMG/M
3300025939\|Ga0207665_10655006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	823	Open in IMG/M
3300026296\|Ga0209235_1006811	All Organisms → cellular organisms → Bacteria	6401	Open in IMG/M
3300026297\|Ga0209237_1036565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2614	Open in IMG/M
3300026318\|Ga0209471_1020025	All Organisms → cellular organisms → Bacteria	3384	Open in IMG/M
3300026325\|Ga0209152_10262780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	642	Open in IMG/M
3300026342\|Ga0209057_1072409	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1495	Open in IMG/M
3300026524\|Ga0209690_1069137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1514	Open in IMG/M
3300026529\|Ga0209806_1016658	All Organisms → cellular organisms → Bacteria	3831	Open in IMG/M
3300026547\|Ga0209156_10011988	All Organisms → cellular organisms → Bacteria	5586	Open in IMG/M
3300026547\|Ga0209156_10094991	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300026557\|Ga0179587_10037743	All Organisms → cellular organisms → Bacteria	2723	Open in IMG/M
3300027643\|Ga0209076_1001920	All Organisms → cellular organisms → Bacteria	4386	Open in IMG/M
3300027655\|Ga0209388_1006824	All Organisms → cellular organisms → Bacteria	2979	Open in IMG/M
3300027748\|Ga0209689_1244975	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	742	Open in IMG/M
3300027880\|Ga0209481_10039228	All Organisms → cellular organisms → Bacteria	2170	Open in IMG/M
3300027909\|Ga0209382_10424684	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300028536\|Ga0137415_10025876	All Organisms → cellular organisms → Bacteria	5791	Open in IMG/M
3300028536\|Ga0137415_11460447	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031720\|Ga0307469_10756930	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	887	Open in IMG/M
3300031820\|Ga0307473_10021445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2642	Open in IMG/M
3300032180\|Ga0307471_100961729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1021	Open in IMG/M
3300032180\|Ga0307471_103152031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.53%
Host-Associated	Host-Associated	6.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.37%
Plants	Host-Associated → Plants	6.47%
Aquatic	Environmental → Aquatic	2.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.76%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.05%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.76%
Loam	Environmental → Terrestrial → Soil → Loam	4.32%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	44.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	18.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	2.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100009223	3300002558	Grasslands Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQG*
JGI25385J37094_100849982	3300002558	Grasslands Soil	MNAVVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGXRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
JGI25383J37093_100018634	3300002560	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
JGI25382J37095_100478213	3300002562	Grasslands Soil	MSDALAVLLVLGGAWSGWRGGRLLVRSLGCADDPSASLWLIRGIRGVVVAVAAGALASGLHFEQTWLLVFGGVFLAEELYETGVVALILRVGRE*
JGI25382J37095_100537301	3300002562	Grasslands Soil	LGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
JGI25386J43895_100432402	3300002912	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGXRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
JGI25389J43894_10645652	3300002916	Grasslands Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFL
JGI25406J46586_100580372	3300003203	Tabebuia Heterophylla Rhizosphere	MMMPIVAAIFTVAGACAAVHGARLTVRALRRADEAASSLWIIRGIRGVVLAVAAWALAGGLVFEQTWLLVFGGVFLAEELYETGVVIAILRWSARLTRP*
Ga0066396_101206272	3300004267	Tropical Forest Soil	FAVLLMLGGAWAGVRGGRLIVRALACADEGAASLRLIRGIRGVVVAVAAGALAGGLHFEQTWLLVFGGVFLAEELYETGVVALILRFAPE*
Ga0066398_100570712	3300004268	Tropical Forest Soil	MVSHVLAVLLMVGGAWLGVRGGRLIARSLARADEPAASLRLIRGVRGVVVAVAAGALAGGLHFEQTWLLVFGGVFLAEEIYETGVVALILRAAPE*
Ga0066674_1000039612	3300005166	Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIGGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
Ga0066674_100097856	3300005166	Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066672_106992352	3300005167	Soil	MEYGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAQELYETSVLLLVLTRADDATSGAR*
Ga0066673_100163481	3300005175	Soil	MEHVVVALLAIGGGWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066688_100736113	3300005178	Soil	MTAATAGGVMEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMAD
Ga0066688_101494832	3300005178	Soil	VAAVLALGGACAIAHGVRLMVRALRRADKASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066685_100630005	3300005180	Soil	PVVAAVLALGGACAIAHGVRLVVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066685_101126183	3300005180	Soil	VIVPIAAAALAVGGACAATHGARLILRALRGADEASSSLTLIRGIRGLVVGVAVWALAGGILFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066678_100387073	3300005181	Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALTGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
Ga0066678_101484072	3300005181	Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGILFAQTWLLVFGGIFLAEELYETGVVALILRRSSATS*
Ga0066675_101006133	3300005187	Soil	MEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066681_101105962	3300005451	Soil	MEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066687_101204673	3300005454	Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRGADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066697_103102831	3300005540	Soil	MTAVTAGGVMEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0070704_1017163262	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRVMTSLLVAAILVLGGVGAAVHGARLATRAVRDSDDVASSLWLIRGIRGLVVAVAAWALAGGLLFAQTWLLVFGGVFLAEELYETGV
Ga0066692_100408781	3300005555	Soil	VVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
Ga0066692_100764854	3300005555	Soil	MSDALAVLLVLGGAWSGWRGGRLLVRSLGCADDPSASLWLIRGIRGVVVAVAAGALASGLHFEQTWLLVFGGVFLAEELYETGVVALILR
Ga0066707_101040934	3300005556	Soil	PVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066700_101976813	3300005559	Soil	MEYGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAQEPYETSVLLLVLTRADDATSGAR*
Ga0066693_100767061	3300005566	Soil	MTAATAGGVMEYVVVALLAIGGGWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066705_108276332	3300005569	Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAE
Ga0066708_102294502	3300005576	Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLVEELYETGVVALILRAGQG*
Ga0066691_100455594	3300005586	Soil	MEYGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGGVFLAQELYETSVLLLVLTRADDATSGAR*
Ga0066706_100644442	3300005598	Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQRWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066903_1028580702	3300005764	Tropical Forest Soil	MVSHVFAVLLTLGGAWAGVRGGRLIVRALARADEGAASLWLVRGIRGVVVAVAAGALAGGLHFEQTWLLVFGSVFLAEELYETGVVALILRLGPE*
Ga0066651_100314934	3300006031	Soil	ALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIGGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
Ga0066696_100544272	3300006032	Soil	MTAVTAGGVMEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066656_105556562	3300006034	Soil	MTAATAGGVREYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066652_1001028572	3300006046	Soil	MTAVTAGGVMEYVVVALLAIGGGWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0075417_100910843	3300006049	Populus Rhizosphere	VTASILAVLFAAGGAWAAVRGARLVLRALRAADDDSSSLSLIRGIRGLVVAIAAWALAGGLILTQTWLLVFGGVFLAEELYETGVVALVLRRAARTAM*
Ga0066658_100741713	3300006794	Soil	VVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066665_104127122	3300006796	Soil	VIVPVVAAVLALGGACAIAPGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQRWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0075421_1002928672	3300006845	Populus Rhizosphere	MATLLVAALLGLGATWAAARGSRLLARGLGHADHPSASLWLVRGIRGAVVGAALGALAAGLLSGQAWLLVFGGVFLAEELYETGVIALALRRAPDPPADAR*
Ga0075431_1003539261	3300006847	Populus Rhizosphere	LLALGATWAAARGRRLLARGLGHADHPSASLWLVRGIRGAVVGAALAAGFLSGQAWLLVFGGVFLAEELYETGVVALALRLAPDPPADAR*
Ga0075426_105740321	3300006903	Populus Rhizosphere	VTAGVVAVMLLGGGAWAALHGARLVTRAVRRADDADASLTLIRGIRGVVVAVAAWALAGGLLLAQTWLLVFGAVFLAEELYETGVVVLILRRAAS*
Ga0075426_106556762	3300006903	Populus Rhizosphere	MVSHVFVVVLLVLGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRVIVVGVAAGALASGLLFEQTWLLVFGGIF
Ga0099791_100041363	3300007255	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR*
Ga0099791_104255102	3300007255	Vadose Zone Soil	MAVVAALLALGGAWAAMHGAGLVVRAVRQADDPASSLWIIRGLRGLVVAVGVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
Ga0099793_100285543	3300007258	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTGLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR*
Ga0099794_107702331	3300007265	Vadose Zone Soil	MTAALHVVAALLAAGGGWAAAHGAGLVVRAVRRADDPSSALRLVRGIRGLVVAVGVWALASGLVFEQTWLLVFGGVFLAEELYETGVLVLILRRG*
Ga0066710_1013738142	3300009012	Grasslands Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQRWLLVFGGVFLAEELYETGVVALILRRSSATS
Ga0066710_1041265962	3300009012	Grasslands Soil	VMEYGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAQELYETSVLLLVLTRADDATSGAR
Ga0066710_1045666111	3300009012	Grasslands Soil	VIVPIAAAALAVGGACTATHGARLILRALRGADEASSSLTLIRGIRGLVGGVAAWALAGGILFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS
Ga0066710_1047958841	3300009012	Grasslands Soil	MEYVVVALLAIGGGWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRM
Ga0066709_1013583222	3300009137	Grasslands Soil	VIVPIAAAALAVGGACTATHGARLILRALRGADEASSSLTLIRGIRGLVGGVAAWALAGGILFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0066709_1020064712	3300009137	Grasslands Soil	MTMLGIELREEDDMTAVTAGGVMEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0066709_1046762911	3300009137	Grasslands Soil	MSDALAVLLVLGGAWSGWRGGRLLVRSLGCADDPSASLWLIRGIRGVVVAVAAGALASGLHFEQTCLIVFGGV
Ga0114129_112051832	3300009147	Populus Rhizosphere	MIVPVAAATLAVGGAFAAAHGARRMIRALRRADEPTSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVVLILRRSPATS*
Ga0114944_14030742	3300009691	Thermal Springs	MLTSPVIDTRRPRGEDVAIGGTMMPLMVEPYAVAVLLVLGGAWAGVRGTRLVVRVLRHADDVAASVWLVRGIRGIVIAVAAGALAAGMLFEQTWLTVFGLVFLAEELYETGVVAL
Ga0126374_111339231	3300009792	Tropical Forest Soil	MVELVAGMLAIGGAAATVHGARLATRAMRYADDMASSLWLIRGIRGLVVAIAVWALAAGLLFAQTWLLVFGGVFLAEELYETGVVIA
Ga0126384_104430152	3300010046	Tropical Forest Soil	MVSHVLAVLLMVGGAWLGVRGGRLIARSLARADEPAASLWLIRGIRGVVVAVAAGALAGGLHFEQTWLLVFGGVFLAEEIYETGVVALILRAAPE*
Ga0126384_112413492	3300010046	Tropical Forest Soil	MVSHVFVVVLLLLGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGVLASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQE*
Ga0126382_101998732	3300010047	Tropical Forest Soil	MTSGVIATAFDLVHDASGGGVMVSHVFAVLLMLGGAWAGVRGGRLIVRALAHADEEAASLWLIRGIRGVVVAVAASALAGGLHFEQTWLLVFGGVFLAEELYETGVVALILRFAPE*
Ga0134082_101640641	3300010303	Grasslands Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETRVVALILRRSS
Ga0134064_101520812	3300010325	Grasslands Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETG
Ga0134111_101275842	3300010329	Grasslands Soil	VIVPVVSAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0134063_100661981	3300010335	Grasslands Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGILFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0134063_101073472	3300010335	Grasslands Soil	DDMNAVVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAAAVWALAGGLLFEQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA*
Ga0134071_103428582	3300010336	Grasslands Soil	MVSHVSVVLLVLGGAWAGSRGGRLIVRSLTRADEPSASLWLIRGLRGVVLAVAAGALAGGLQFEQTWLLVFGGVFLAEELYETGVVALILRFAPE*
Ga0134071_104860593	3300010336	Grasslands Soil	EDDREAPDVIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0126376_100207764	3300010359	Tropical Forest Soil	MVSHVFAVLLMLGGAWAGVRGGRLIVRALARADEEAASLWLIRGIRGVVVAVAASALAGGLHFEQTWLLVFGGVFLAEELYETGVVALILRLAPE*
Ga0126376_105170611	3300010359	Tropical Forest Soil	MVSHVFVVVLVLLGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVMGVAAGVLASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQ
Ga0126372_120696902	3300010360	Tropical Forest Soil	MVSHVFAVLLTLGGAWAGVRGGRLIVRALARADEGAASLWLVRGIRGVVVAVAAGALAGGLHFEQPWLLVFGSVFLAEELYETGVVALILRFAPE*
Ga0126377_112109102	3300010362	Tropical Forest Soil	MVSHVFAVLLMLGGAWAGVRGGRLIVRALAHADEEAASLWLIRGIRGVVVAVAASALAGGLHFEQTWLLVFGGVFLAEELYETGVVALILRFAPE*
Ga0137393_110663862	3300011271	Vadose Zone Soil	MEYVVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR*
Ga0137399_101924753	3300012203	Vadose Zone Soil	MAVVAALLALGGAWAAMHGAGLVVRAVRQADDPASSLWIIRGLRGLVVAVGVWALAGGWVFEQTWLLVFGAVFLAEELYETGVVVLL
Ga0137376_103443942	3300012208	Vadose Zone Soil	MTAATAGGVTEYVVVALLAIGGGWAAGHGAGLLVRAVRRADDPASSLRAVRGIRSLVIGVAAWALAAGLLLEQTWLFVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0137377_112945522	3300012211	Vadose Zone Soil	IAHGGRLMVRALRRADEASSSLPLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0137371_110356392	3300012356	Vadose Zone Soil	MNEVTTHVAAALLVAGGAWMATYGARLVVRAVRGPDDASSLSIIRGIRGLVVAIAAWSLAGGLLFAQTWLLVFGGIFLAEELYETGMVVLILRRSAAPS*
Ga0137385_100354096	3300012359	Vadose Zone Soil	VVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQG*
Ga0137360_106102753	3300012361	Vadose Zone Soil	VIEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRTVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR*
Ga0137397_100936394	3300012685	Vadose Zone Soil	VIEYVVAALLAGGGGWAAGHGARLLVRAVHRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR*
Ga0137397_103091772	3300012685	Vadose Zone Soil	MTSRVIDDASAPRHDALGIEPREEDDMAVVAALLALGGAWAAMHGAGLVVRAVRQADDPASSLWIIRGIRGLVVAVAVWALAGGLVFEQTWLLVFGAVFLAGELYETGVVVLLLSHMGGPDMAPHTPQRLCP*
Ga0137394_103207502	3300012922	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEKLYETGVLLLVLTMIDDATSGAR*
Ga0137394_114242771	3300012922	Vadose Zone Soil	VTEYVVAALLAVGGGWAGGHGARLLVRAVCRADDPASSLRAVRGIRGVVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLLL
Ga0137359_105866423	3300012923	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAGRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0137419_108423591	3300012925	Vadose Zone Soil	MAYVVAALLAVGGGWAAGHGARLLVRAVRRADDPASSLRAGRGIRGVVIGVAAWALAAGVLFEPTWLLVFGAVFLAEELYETGVL
Ga0137416_121131741	3300012927	Vadose Zone Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALIL
Ga0137404_100748522	3300012929	Vadose Zone Soil	MAVVAALLALGGAWAAMHGAGLVVRAVRQADDPASSLWIIRGIRGLVVAVGVWALAGGWVFEQTWLLVFGAVFLAEELYETGVVVLLLKTAGDASAR*
Ga0137407_100303425	3300012930	Vadose Zone Soil	MAVVAALLALGGAWAAMHGAGLVVRAVRQADDPASSLWIIRGLRGLVVAVGVWALAGGWVFEQTWLLVFGAVFLAEELYETGVVVLLLKTAGDASAR*
Ga0134077_100109603	3300012972	Grasslands Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGLVALILRAGQG*
Ga0134110_100571973	3300012975	Grasslands Soil	ACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0134076_100352633	3300012976	Grasslands Soil	GGVMVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQG*
Ga0134076_100396721	3300012976	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVL
Ga0134081_100423762	3300014150	Grasslands Soil	VIVPVVAAVLALGGACAIAHGVRLVVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQRWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0134081_101490461	3300014150	Grasslands Soil	MLGIELREDDMTAATAGGVMEYVVVALLAIGGGWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR*
Ga0137418_1001477310	3300015241	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLVLTMADDATSGAR*
Ga0134085_100322205	3300015359	Grasslands Soil	AVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS*
Ga0134069_13048271	3300017654	Grasslands Soil	VIVPVVSAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETG
Ga0134074_10930452	3300017657	Grasslands Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAG
Ga0134083_100029427	3300017659	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVLGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0134083_101004433	3300017659	Grasslands Soil	MRDALAVLLVLGGAWSGWRGGRLLVRSLGCADDPSASLWLIRGIRGVVVAVAAGALASGLHFEQTWLLVFGGVFLAEELYETGVVALILRVGRE
Ga0134083_101310232	3300017659	Grasslands Soil	MVSHVSVVLLVLGGAWAGSRGGRLIVRSLTRADEPSASLWLIRGIRGVVVAVAAGALAGGLQFEQTWLLVFGGVFLAEELYETGVVALILRFAPE
Ga0066655_100020116	3300018431	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIGGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0066655_100068055	3300018431	Grasslands Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQG
Ga0066655_106816103	3300018431	Grasslands Soil	CAIAHGVRLMIRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS
Ga0066662_100620904	3300018468	Grasslands Soil	MSDALAVLLVLGGAWSGWRGGRLLVRSLGCADDPSASLWLIRGIRGVVVAVAAGALASGLHFEQTWLLVFGGVFLAEELYETGVVALILRVGRE
Ga0066662_103027432	3300018468	Grasslands Soil	MEYGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAQELYETSVLLLVLTRADDATSGAR
Ga0066662_106289122	3300018468	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0066662_123877952	3300018468	Grasslands Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS
Ga0066669_100031491	3300018482	Grasslands Soil	MAPVVAALLALGGAWGAVHGAGLVVRAVRHADDPSSSLWIIGGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0066669_103534851	3300018482	Grasslands Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGLVVGVAAWALAGGMLFAQTWLLVFGGVFLAEELYETGVV
Ga0066669_108923133	3300018482	Grasslands Soil	AVGGACAATHGARLILRALRGADEASSSLTLIRGIRGLVVGVAAWALAGGILFAQTWLLVFGGVFLAEELYETGVVALILRRSSATS
Ga0137408_14057363	3300019789	Vadose Zone Soil	MAVVAALLALGGAWTAMHGAGLVVRAVRQADDPASSLWIIRGLRGLVVAVGVWALAGGWVFEQTWLLVFGAVFLAEELYETGVVVLLLKTAGDASAR
Ga0137408_14057373	3300019789	Vadose Zone Soil	MAVVAALLALGGAWTAMHGAGLVVRAVRQADDPASSLWIIRGLRGLVVAVGVWALAGGWVFEQTWLLVFGAVFLAEELYETGVVVLLLRTAGDASAH
Ga0212128_105416512	3300022563	Thermal Springs	MMPLMVEPYAVAVLLVLGGAWAGVRGTRLVVRVLRHADDVAASVWLVRGIRGIVIAVAAGALAAGMLFEQTWLTVFGLVFLAEELYETGVVALILRRA
Ga0209827_110942352	3300025149	Thermal Springs	MPLMVEPYAVAVLLVLGGAWAGVRGTRLVVRVLRHADDVAASVWLVRGIRGIVIAVAAGALAAGMLFEQTWLTVFGLVFLAEELYETGVV
Ga0207665_106550061	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLLVAAILVLGGVGAAVHGARLATRAVRDSDDVASSLWLIRGIRGLVVAVAAWALAGGLLFAQTWLLVFGGVFLAEELYETGVVIAILKWVGWQSHPRTG
Ga0209235_10068112	3300026296	Grasslands Soil	MNAVVVAALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0209237_10365651	3300026297	Grasslands Soil	MAPVVAALLALGGAWAAVHGAGLVIRAVRHADDPSSSLWIIRGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0209471_10200254	3300026318	Soil	MEYGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAQEPYETSVLLLVLTRADDATSGAR
Ga0209152_102627802	3300026325	Soil	ALLALGGAWAAVHGAGLVVRAVRHADDPSSSLWIIGGIRGLVVAVAVWALAGGWLFGQTWLLVFGVVFLAEELYETGVVVLLLRMAGSGGA
Ga0209057_10724093	3300026342	Soil	MTAVTAGGVMEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR
Ga0209690_10691373	3300026524	Soil	VMVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQG
Ga0209806_10166581	3300026529	Soil	YGVAALLAVGGGWAAGHGAGLLVRAVRRADDPASSRRAVRGIRGLVIGVAAWALAAGLLLEQTWLLVFGAVFLAQELYETSVLLLVLTRADDATSGAR
Ga0209156_100119886	3300026547	Soil	MEYVVVALLAIGGVWAAVHGARLLVRAVRRADDPASSLRAVRGIRGLVIGAAAWALAAGLLLEQTWLLVFGAVFLAEELYETGVLVLVLRMADDATSGAR
Ga0209156_100949912	3300026547	Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLVEELYETGVVALILRAGQG
Ga0179587_100377433	3300026557	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGARLLVRAVRRADDPASSLRAGRGIRGVVIGVAAWALAAGVLFEPTWLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR
Ga0209076_10019207	3300027643	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTGLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR
Ga0209388_10068242	3300027655	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTWLLVFGAVFLAEELYETGVLLLVLTMIDDATSGAR
Ga0209689_12449752	3300027748	Soil	VIVPVVAAVLALGGACAIAHGVRLMVRALRRADEASSSLTLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQG
Ga0209481_100392283	3300027880	Populus Rhizosphere	VTASILAVLFAAGGAWAAVRGARLVLRALRAADDDSSSLSLIRGIRGLVVAIAAWALAGGLILTQTWLLVFGGVFLAEELYETGVVALVLRRAARTAM
Ga0209382_104246842	3300027909	Populus Rhizosphere	MATLLVAALLGLGATWAAARGSRLLARGLGHADHPSASLWLVRGIRGAVVGAALGALAAGLLSGQAWLLVFGGVFLAEELYETGVIALALRRAPDPPADAR
Ga0137415_100258764	3300028536	Vadose Zone Soil	MEYLVAALLAVGGGWAAGHGAGLLVRAVRRADDPVSSLRAVRGIRGVVIGVATWALAAGLLFEQTGLLVFGAVFLAEELYETGVLVLVLTMADDATSGAR
Ga0137415_114604472	3300028536	Vadose Zone Soil	MVSHVFVVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLV
Ga0307469_107569302	3300031720	Hardwood Forest Soil	MVSHVFVVVLLVLGGAWAAWRGGGLVVRSLADADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQE
Ga0307473_100214452	3300031820	Hardwood Forest Soil	MVSHVFIVVLLALGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQE
Ga0307471_1009617292	3300032180	Hardwood Forest Soil	MVSHVFVVVLLVLGGAWAAWRGGGLVVRSLARADDPSASLWLIRGIRGVVVGVAAGALASGLLFEQTWLLVFGGIFLAEELYETGVVALILRAGQE
Ga0307471_1031520312	3300032180	Hardwood Forest Soil	MVSHVSVVLLVLGGAWAGLRGGRLNVRSLTRADEPSASLWLIRGIRGVVVAVAAGALAGGVQFEQTWLLVFGGVFLAEELYETGVVALILRFAPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054726

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences