NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F054318

Metagenome / Metatranscriptome Family F054318

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F054318
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 48 residues
Representative Sequence VERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAA
Number of Associated Samples 131
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.29 %
% of genes from short scaffolds (< 2000 bps) 94.29 %
Associated GOLD sequencing projects 130
AlphaFold2 3D model prediction Yes
3D model pTM-score0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(32.143 % of family members)
Environment Ontology (ENVO) Unclassified
(31.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(37.857 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF01957NfeD 57.14
PF01145Band_7 15.71
PF01040UbiA 0.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.00 %
UnclassifiedrootN/A25.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573002|GZIGXIF02HPQCJNot Available523Open in IMG/M
3300001867|JGI12627J18819_10050181All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1741Open in IMG/M
3300002245|JGIcombinedJ26739_100597700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales980Open in IMG/M
3300003219|JGI26341J46601_10140907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria678Open in IMG/M
3300003659|JGI25404J52841_10008688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2169Open in IMG/M
3300005181|Ga0066678_11044065Not Available528Open in IMG/M
3300005435|Ga0070714_100235711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1687Open in IMG/M
3300005439|Ga0070711_100613886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia908Open in IMG/M
3300005446|Ga0066686_10939923Not Available565Open in IMG/M
3300005537|Ga0070730_10801075Not Available594Open in IMG/M
3300006172|Ga0075018_10299609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia793Open in IMG/M
3300006358|Ga0068871_100625396All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300006806|Ga0079220_11610539Not Available563Open in IMG/M
3300006893|Ga0073928_10917142Not Available600Open in IMG/M
3300006953|Ga0074063_14251622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia809Open in IMG/M
3300007265|Ga0099794_10299708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia832Open in IMG/M
3300009101|Ga0105247_10156021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1508Open in IMG/M
3300009143|Ga0099792_11268199Not Available502Open in IMG/M
3300009148|Ga0105243_10492103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1160Open in IMG/M
3300009162|Ga0075423_12836844Not Available531Open in IMG/M
3300010043|Ga0126380_10380075All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300010047|Ga0126382_11357150Not Available646Open in IMG/M
3300010323|Ga0134086_10320453Not Available606Open in IMG/M
3300010333|Ga0134080_10256421All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia773Open in IMG/M
3300010335|Ga0134063_10746706Not Available509Open in IMG/M
3300010341|Ga0074045_10904288Not Available557Open in IMG/M
3300010359|Ga0126376_11850062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria642Open in IMG/M
3300010361|Ga0126378_10904937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria989Open in IMG/M
3300010937|Ga0137776_1534676Not Available653Open in IMG/M
3300011269|Ga0137392_10808315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia774Open in IMG/M
3300012203|Ga0137399_10291674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1346Open in IMG/M
3300012207|Ga0137381_11240252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300012349|Ga0137387_10509694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia873Open in IMG/M
3300012351|Ga0137386_10591568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria799Open in IMG/M
3300012354|Ga0137366_10173000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1621Open in IMG/M
3300012487|Ga0157321_1004910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia859Open in IMG/M
3300012685|Ga0137397_10293671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1211Open in IMG/M
3300012951|Ga0164300_10193286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria991Open in IMG/M
3300012989|Ga0164305_11087394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia686Open in IMG/M
3300013296|Ga0157374_11258271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria762Open in IMG/M
3300013297|Ga0157378_10374043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1397Open in IMG/M
3300014157|Ga0134078_10248628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia745Open in IMG/M
3300014200|Ga0181526_10261341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1104Open in IMG/M
3300014487|Ga0182000_10193191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia774Open in IMG/M
3300016341|Ga0182035_10525335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1014Open in IMG/M
3300016371|Ga0182034_10491921All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1022Open in IMG/M
3300016422|Ga0182039_10462577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1089Open in IMG/M
3300017654|Ga0134069_1260012Not Available606Open in IMG/M
3300017943|Ga0187819_10249759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1038Open in IMG/M
3300017947|Ga0187785_10652985Not Available547Open in IMG/M
3300017959|Ga0187779_10562167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria760Open in IMG/M
3300017966|Ga0187776_11141464Not Available581Open in IMG/M
3300017994|Ga0187822_10163653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria722Open in IMG/M
3300018060|Ga0187765_10470049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria790Open in IMG/M
3300018482|Ga0066669_10568342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria990Open in IMG/M
3300020022|Ga0193733_1115950All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria743Open in IMG/M
3300020199|Ga0179592_10392025Not Available607Open in IMG/M
3300020581|Ga0210399_10222738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1571Open in IMG/M
3300021088|Ga0210404_10323228All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia852Open in IMG/M
3300021403|Ga0210397_10440602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia979Open in IMG/M
3300021407|Ga0210383_10279057All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1435Open in IMG/M
3300021475|Ga0210392_10859324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria678Open in IMG/M
3300021479|Ga0210410_10817396All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia817Open in IMG/M
3300021560|Ga0126371_13349781Not Available541Open in IMG/M
3300024288|Ga0179589_10096779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1199Open in IMG/M
3300024325|Ga0247678_1015584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1135Open in IMG/M
3300025900|Ga0207710_10486340Not Available640Open in IMG/M
3300025905|Ga0207685_10143101All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1074Open in IMG/M
3300025905|Ga0207685_10377720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300025913|Ga0207695_11665819Not Available519Open in IMG/M
3300025914|Ga0207671_11207171Not Available592Open in IMG/M
3300025931|Ga0207644_11649674Not Available537Open in IMG/M
3300025938|Ga0207704_11039393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria694Open in IMG/M
3300026322|Ga0209687_1208628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia603Open in IMG/M
3300026374|Ga0257146_1026796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300026538|Ga0209056_10706641Not Available510Open in IMG/M
3300026547|Ga0209156_10345595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria647Open in IMG/M
3300026551|Ga0209648_10073390All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2874Open in IMG/M
3300027050|Ga0209325_1043020Not Available546Open in IMG/M
3300027119|Ga0209522_1006558All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1169Open in IMG/M
3300027161|Ga0208368_103816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria758Open in IMG/M
3300027371|Ga0209418_1100764Not Available518Open in IMG/M
3300027523|Ga0208890_1027586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia844Open in IMG/M
3300027905|Ga0209415_10374594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1168Open in IMG/M
3300028875|Ga0307289_10140810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria991Open in IMG/M
3300030940|Ga0265740_1030102Not Available599Open in IMG/M
3300031090|Ga0265760_10027457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1668Open in IMG/M
3300031544|Ga0318534_10133622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1428Open in IMG/M
3300031544|Ga0318534_10289860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia943Open in IMG/M
3300031546|Ga0318538_10254019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria944Open in IMG/M
3300031546|Ga0318538_10398043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia745Open in IMG/M
3300031564|Ga0318573_10075196All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1696Open in IMG/M
3300031564|Ga0318573_10244501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia956Open in IMG/M
3300031572|Ga0318515_10157103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1213Open in IMG/M
3300031573|Ga0310915_10212550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1355Open in IMG/M
3300031680|Ga0318574_10156438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1296Open in IMG/M
3300031682|Ga0318560_10072731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1738Open in IMG/M
3300031713|Ga0318496_10054409All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2078Open in IMG/M
3300031713|Ga0318496_10718764Not Available551Open in IMG/M
3300031736|Ga0318501_10481713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria675Open in IMG/M
3300031747|Ga0318502_10284836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria969Open in IMG/M
3300031747|Ga0318502_10422163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia794Open in IMG/M
3300031753|Ga0307477_10253176All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1220Open in IMG/M
3300031754|Ga0307475_11548106Not Available508Open in IMG/M
3300031763|Ga0318537_10368727Not Available530Open in IMG/M
3300031778|Ga0318498_10057071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1739Open in IMG/M
3300031779|Ga0318566_10066661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1734Open in IMG/M
3300031781|Ga0318547_10163416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1316Open in IMG/M
3300031792|Ga0318529_10129063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1155Open in IMG/M
3300031794|Ga0318503_10082384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1010Open in IMG/M
3300031796|Ga0318576_10376887Not Available670Open in IMG/M
3300031797|Ga0318550_10056337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1778Open in IMG/M
3300031799|Ga0318565_10033175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2342Open in IMG/M
3300031805|Ga0318497_10280729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia926Open in IMG/M
3300031821|Ga0318567_10293459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia916Open in IMG/M
3300031831|Ga0318564_10094529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1325Open in IMG/M
3300031832|Ga0318499_10079517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1255Open in IMG/M
3300031845|Ga0318511_10037252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1894Open in IMG/M
3300031860|Ga0318495_10064981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1623Open in IMG/M
3300031910|Ga0306923_11261883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria786Open in IMG/M
3300031912|Ga0306921_10632025All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1235Open in IMG/M
3300031912|Ga0306921_12282576Not Available568Open in IMG/M
3300031942|Ga0310916_11590724Not Available531Open in IMG/M
3300031954|Ga0306926_12680985Not Available542Open in IMG/M
3300031959|Ga0318530_10039491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1735Open in IMG/M
3300032035|Ga0310911_10383462All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia813Open in IMG/M
3300032043|Ga0318556_10078130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1648Open in IMG/M
3300032052|Ga0318506_10100136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1237Open in IMG/M
3300032052|Ga0318506_10518312Not Available528Open in IMG/M
3300032054|Ga0318570_10060653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1591Open in IMG/M
3300032174|Ga0307470_10535040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia862Open in IMG/M
3300032770|Ga0335085_11181493All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia814Open in IMG/M
3300032782|Ga0335082_10790951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia811Open in IMG/M
3300032783|Ga0335079_10067197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4083Open in IMG/M
3300032805|Ga0335078_10787137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1162Open in IMG/M
3300032897|Ga0335071_10137175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2398Open in IMG/M
3300032954|Ga0335083_10611625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia896Open in IMG/M
3300032955|Ga0335076_10163058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2141Open in IMG/M
3300033158|Ga0335077_10062623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4472Open in IMG/M
3300033158|Ga0335077_11993481Not Available539Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil32.14%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.29%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.29%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.57%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.14%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.14%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.14%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.43%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.43%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.43%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.43%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.43%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.71%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.71%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.71%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.71%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.71%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.71%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.71%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.71%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.71%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.71%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.71%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573002Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012487Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510Host-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024325Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027050Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027119Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027161Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes)EnvironmentalOpen in IMG/M
3300027371Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027523Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031821Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FE1_093741602189573002Grass SoilVEPGDTGLGRDAYGPPKHERDRHGYGPEPYPSDDGYPVEDDDAAGPGRRAEDEDDFGQLL
JGI12627J18819_1005018133300001867Forest SoilVERRDTGLGRDAYGPSRRKRDRRGYGPGPYPQDEGYPAEEDD
JGIcombinedJ26739_10059770013300002245Forest SoilVERGDTGLGRDAYGLPRHERDRRGYGPEGPRPQPSDDGYPAPSEYEEDDAAGPGRPLDEE
JGI26341J46601_1014090723300003219Bog Forest SoilVERGDTGLGRDAYGPPRRERDRRGYGPGSYPPDDGYPDSAEE
JGI25404J52841_1000868813300003659Tabebuia Heterophylla RhizosphereVERGDTGLGRDAYGPPRHERDRRGHGPAPYPSDDGYPAEDDDAAGPGRRVEDEDDFGQ
Ga0066678_1104406513300005181SoilVERGDTGLGRDAYGPPRHERDRRGYGLGPYPSDDGYPAEEGDAAGSGRRPEAE
Ga0070714_10023571113300005435Agricultural SoilVERGDTGLGRDAYGLPRRERDRRGNGPRPYPSDDGFPAPAE
Ga0070711_10061388623300005439Corn, Switchgrass And Miscanthus RhizosphereVERGDTGLGRDAYGLPRRERDRQGYGPRPYPSDDGFPAPAEDDDAAGSGRPVDVDEDDY
Ga0066686_1093992313300005446SoilVERGDTGLGRDAYGPPRHERDRRGYDLGPYPSDDGYPAEEDDAAESGRRVEAEDDDYR
Ga0070730_1080107513300005537Surface SoilVERSDTGLGRDAYGLPRRERDRRGNGSRPDPADEGYP
Ga0075018_1029960913300006172WatershedsVERGDTGLGRDAYGPPKHERDRRGYGLGPYPSDDGYPAEEDDAARSARTA
Ga0068871_10062539633300006358Miscanthus RhizosphereVERGDTGLGRDAYGLPRRERDRRGYGPRPYPSDDGFPAPAEDDDAAGSGRPVDVDEDDYG
Ga0079220_1161053913300006806Agricultural SoilVERRDTGLGRDAYGPSRRKRDRRGYGPGPYPQDEGYP
Ga0073928_1091714213300006893Iron-Sulfur Acid SpringVERGDTGHGRDAYGPPGHERLRHAYGPDAFLSSDDGYLAPFP
Ga0074063_1425162213300006953SoilVERGDTGLGRDAYGPSRHERDRRGYGPGPYPSDDGYPAEDDDA
Ga0099794_1029970813300007265Vadose Zone SoilVEPGDSGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEEDDSA
Ga0105247_1015602113300009101Switchgrass RhizosphereVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDEGYPVEDDDAAGPGRRAEDEDDFGQLL
Ga0099792_1126819923300009143Vadose Zone SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAA
Ga0105243_1049210313300009148Miscanthus RhizosphereVERGDTGLGRDAYGPPRHERDRHGHGPEPYPSDDGYPVEDDDAAGPGRRAQDEDDFGQLL
Ga0075423_1283684423300009162Populus RhizosphereVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPEDDDAAGPGRRAEDEDDFGQLLR
Ga0126380_1038007533300010043Tropical Forest SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPPDEGYPAEEEDAAAPGRRPEA
Ga0126382_1135715023300010047Tropical Forest SoilVERGDTSLGRDAYGPPRRERDRRGYDPGPHPPDEGYPAEEDDAA
Ga0134086_1032045323300010323Grasslands SoilVERGDTGLGRDAYGPPRHERDRRGYGHGRYPSDDGYPAEEDDAAGSGRRPEAEDDEFAH
Ga0134080_1025642113300010333Grasslands SoilVERGDTGLGRDAYGPPRHERDRRGYGHGPYPSDDRYPAEEDDAAGSGRRPEAEDDEFAHR
Ga0134063_1074670623300010335Grasslands SoilVERGDTGLGRDAYGPPRHERDRRGYGPYPSDDGYPAE
Ga0074045_1090428813300010341Bog Forest SoilVERGDTGLGRDAYGLPRREQDRRDYGPGSYPPDDGYPDSAEEDDAAGPGRPVDVEEDDYG
Ga0126376_1185006223300010359Tropical Forest SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGFPAEEDDAA
Ga0126378_1090493713300010361Tropical Forest SoilVERGDTGLGRDAYGPSRRKRDRRGYGPGPYPQNEEYPAE
Ga0137776_153467613300010937SedimentVERGDTGLGRDAYGSPRREREHRGYDPGPYPPDERYPAEEDDAAGPGRWLE
Ga0137392_1080831513300011269Vadose Zone SoilVERGDTGLGRDAYGSPRRERDRRGYGPGPYPSDDGYPDAGEDDAAGPG
Ga0137399_1029167433300012203Vadose Zone SoilVERGDTGLGRDAYGPPRHERDRRGYGLGLYPSDDGYPAEEDDAAGSGRRPEAEDD
Ga0137381_1124025223300012207Vadose Zone SoilVERGDTGLGRDAYGLPRREQDRRGYGPRPHPADDGFPAPAEEDDA
Ga0137387_1050969413300012349Vadose Zone SoilVERGDTGLGRDAYGPPRHERVRRGYGPGPYPSDDGYPAEDDDAAGPGHQ
Ga0137386_1059156823300012351Vadose Zone SoilVERGDNGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAAGPG
Ga0137366_1017300033300012354Vadose Zone SoilVERGDTGLGRDAYGSPRRERDRRGYGPGPYPSDDGYPAPAEEDDAAGSGR
Ga0157321_100491023300012487Arabidopsis RhizosphereVERGDIGLGRDAYGPPRHERDRHRYVPEPYPADDGYPVDDEDAAG
Ga0137397_1029367123300012685Vadose Zone SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAAGPGRQAEDD*
Ga0164300_1019328613300012951SoilVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDDGYPVEDDEAAGPGR
Ga0164305_1108739423300012989SoilVERGDTGLGRDAYGPPRHERDRRGYGLGPYPSDDGYPAEE
Ga0157374_1125827113300013296Miscanthus RhizosphereVERGDTGLGRDAYGLPRRERDRRGYGPRPYPSDDGFPAPA
Ga0157378_1037404313300013297Miscanthus RhizosphereVERGDTGLGRDAYGPPRHKRDRRGYGPGPYPSDDGYPAEDDDAAGPGRQAEDDEFGQLL
Ga0134078_1024862823300014157Grasslands SoilVERGDTGLGRDAYGPPRHERDRRGYDLGPYPSDDGYPAEEDDA
Ga0181526_1026134113300014200BogVERGDTGLGRDAYGIPRRERDRRGYGPGPYPSDDGYPASAEEDDAAGSGRPVDAEEDDY
Ga0182000_1019319123300014487SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAAGPGRRTEDE
Ga0182035_1052533533300016341SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDD
Ga0182034_1049192113300016371SoilVQRGDTGHGRDAYGPPRHERDRRGHGPGPYPPDEGYPAGEDGAAG
Ga0182039_1046257713300016422SoilVERGDTGLGRDAYGPPRRERDRRGYAAGPYPADEGYPPEEDHAAG
Ga0134069_126001213300017654Grasslands SoilVERGDTGLGRDAYGPPRHERDRRGYDLGPYPSDDGYPAEEDDAAESGRRVEA
Ga0187819_1024975933300017943Freshwater SedimentVERGDTGLGRDAYGLPRRERDRRGPGPYPSDDGYPASAEEDDAAGSGRPVDAEEDDY
Ga0187785_1065298523300017947Tropical PeatlandVERGDTGLGRDASGPPRRERDRRGYGPGPYPPDEGRLVEEDDAAGPG
Ga0187779_1056216723300017959Tropical PeatlandVERGDTGLGRDAYGPPRRERDRRGYGRGPYPADDGY
Ga0187776_1114146423300017966Tropical PeatlandVERGDTGLGRDAYGLPRRERDRRGYGPGPYPADDGYPTSADYEED
Ga0187822_1016365313300017994Freshwater SedimentVERGDTGLGRDAYGSPRRERDHRGYGPGPYPQDEGYPGEEDDAA
Ga0187765_1047004923300018060Tropical PeatlandVERGDTGLGRDAYDLPGRERDRRGYGPGPYPSEHAYPPSSEYKDDTPGSGRPVEVE
Ga0066669_1056834213300018482Grasslands SoilVERGDTGLGRDAYGPSRHERDRHGYGAGAYPSDDGYPAEDDDAAGPG
Ga0193733_111595023300020022SoilVERGDTGLGRDTYGPPRHERDRRGYGPGPYPSYDEYPAEGDDAGGP
Ga0179592_1039202523300020199Vadose Zone SoilVEPGDSGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEEDDSAGSGRRTEAED
Ga0210399_1022273833300020581SoilVERGDAGLGRDAYGSPRRERDRRGYGPGPHPSVDGSPPSEYEEDDAVASGRPVGVEEDD
Ga0210404_1032322813300021088SoilVERGDTGLGRDAYGPPKHERDRRGYGLGPYPSDDGYPAE
Ga0210397_1044060233300021403SoilVERGDAGLGRDAYGSPRRERDRRGYGPGPHPSVDGSPPAEYEEDDA
Ga0210383_1027905733300021407SoilVERGDAGLGRDAYGSPRRERDRRSYGPGPHPSVDGSAPSEYEEDDAV
Ga0210392_1085932423300021475SoilVERGDTGLGRDAYGPPRRERDRRGHGPGPYPPDEGYPAE
Ga0210410_1081739613300021479SoilVERGDTGLGRDAYGPPRHERDRRGYDPGPYPADDGYPAEED
Ga0126371_1334978113300021560Tropical Forest SoilVERGDTGLGRDAYGPSRRKRDRRGYGPGPYPQDEGYTAEEDDTAGSGRRPEAED
Ga0179589_1009677933300024288Vadose Zone SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDR
Ga0247678_101558433300024325SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDATGPG
Ga0207710_1048634023300025900Switchgrass RhizosphereVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDEGYPVEDDDA
Ga0207685_1014310133300025905Corn, Switchgrass And Miscanthus RhizosphereVERGDTGLGRDAYGPPRRERDRRGHGPGPYPPDEGYPAEEDDAAGSGRRPETEDDDYGQ
Ga0207685_1037772023300025905Corn, Switchgrass And Miscanthus RhizosphereVERGDTGLGRDAYGPPRHERDRRGHGLGPYPSDDGYPAEEDDTARSARRAEAEDDEFGQL
Ga0207695_1166581923300025913Corn RhizosphereVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDEGYP
Ga0207671_1120717113300025914Corn RhizosphereVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDDGYPVEDDE
Ga0207644_1164967413300025931Switchgrass RhizosphereVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDDGYPVED
Ga0207704_1103939313300025938Miscanthus RhizosphereVERGDTGLGRDAYGPPRHERDRHGYGPEPYPSDEGYPVED
Ga0209687_120862813300026322SoilVERGDTGLGRDAYGPPRHERDRRGYDLGPYPSDDG
Ga0257146_102679613300026374SoilVERGDTGLGRDAYGPPRHERDRRGYGLGPYPSDDG
Ga0209056_1070664113300026538SoilVEPGDSGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEKDDSAGSGRRPEAEDDD
Ga0209156_1034559513300026547SoilVERGDTGLGRDAYGPPRHERDRRGYDLGPYPSDDGY
Ga0209648_1007339013300026551Grasslands SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYPSDDGYPDAGEDD
Ga0209325_104302013300027050Forest SoilVERRDTGLGRDAYGPSRRKRDRRGYGPGPYPQDEGYPAEEDDAAGSGRRP
Ga0209522_100655833300027119Forest SoilVERRDTGLGRDAYGPSRRKRDRRGYGPGPYPQDEGYPAEEDDGAGSGRRPEAEDG
Ga0208368_10381623300027161Forest SoilVERGDTGLGRDAYGPPRHERDRRGYDPGPYPADDGYPAEEDDAAGSGRRPEAADDDYGQFDY
Ga0209418_110076413300027371Forest SoilVERGDTGLGRDAYGPPRRERDRRGHDPGPYSPDGGYPAEDDDAA
Ga0208890_102758613300027523SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAGGPGR
Ga0209415_1037459413300027905Peatlands SoilVERGDTGLGRDAYGLPRRERDRRGYGPGPHPSDDGYPASAEEDDAAGSGRPVDAEED
Ga0307289_1014081013300028875SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDEGYPAEDDDAAGPGRRTEDED
Ga0265740_103010223300030940SoilVERGDTGLGRDAYGLPRRERDRLGYGPEPYPSDDGYPAAAEEDDAAGPGRAVDA
Ga0265760_1002745713300031090SoilVERGDTGLGRDAYGLPRRERDRLGYGPESYPSDDGYPAAAEEDDAAGPGRAVDAEEDDYG
Ga0318534_1013362213300031544SoilVERGDTGLGRDAYGPPRRERDRRASDPGLYPPDEGYQAEEDDAAGPGRRPEAEDGD
Ga0318534_1028986013300031544SoilVERGDTGLGRDAYGPPRRERDRRGYAAGPYPADEGYPPEEDDAAGSGRRPEAE
Ga0318538_1025401913300031546SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYP
Ga0318538_1039804323300031546SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYPPDEGHLVEEDDAAGPG
Ga0318573_1007519633300031564SoilVERGDTGLGRDAYGPSRRERDHRGYDPGPYLPDEDYPAEE
Ga0318573_1024450113300031564SoilVERGDTGLGRDAYGLPGRERDRRGYVPEPYPPDDGHAAPSEYGEDDAARSG
Ga0318515_1015710333300031572SoilVERGDTGLGRDAYGPSRRERDHRGYDPGPYLPDEDYPAEEDDPAWSGR
Ga0310915_1021255013300031573SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYPPDEGHLVEEDDAAGPGRWPEDEA
Ga0318574_1015643813300031680SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYPPDEGQLVEEDDAAGSGRR
Ga0318560_1007273133300031682SoilVERGDTGLGRDAYGPSRRERDHRGYDPGPYLPDEDYPAEEDDPARSGRRAEAEDPDYGQLLR
Ga0318496_1005440943300031713SoilVERGDTGLGRDAYGPSRRERDHRGYDPGPYLPDED
Ga0318496_1071876423300031713SoilVERGDTGLGRDAYGLPGRERDRRGYDPEPYPIDDGYAVPSGYGEDDAAGSGR
Ga0318501_1048171323300031736SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDDAAGAG
Ga0318502_1028483613300031747SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPA
Ga0318502_1042216323300031747SoilVERGDTGLGRDAYGPSRRERDRRGYDPGPYPPDEDYPAEEDDPTRSGRWAEAEDLDYG
Ga0307477_1025317613300031753Hardwood Forest SoilVERGDTGLGRDAYGPPRHERDRRGHGLGPYPSDDG
Ga0307475_1154810623300031754Hardwood Forest SoilVERGDTGLGRDAYGPPRHERDRHGYAPGAYPSDDGYPVEDDDAVGPGRR
Ga0318537_1036872723300031763SoilVERGDTGLGRDAYGPPRRERGRRGYSPGSYPVDDGYPDPAE
Ga0318498_1005707133300031778SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDDAAGAGRRPEAEDGDYGQLLR
Ga0318566_1006666133300031779SoilVERGDTGLGRDAYGPPRRERDRRASDPGLYPPDEGYQAEEDDAAG
Ga0318547_1016341613300031781SoilVERGDTGLGRDAYGPSRRERDHRGYDPGPYLPDEDYPAEEDDPA
Ga0318529_1012906313300031792SoilVERGDTGLGRDAYGPSRRERDRRGYDPGPYPPDEDYPAEEDDPTR
Ga0318503_1008238413300031794SoilVERGDTGLGRDAYGPSRRERDHRGYDPGPYLPDEDYPAEEDDPAWSGRR
Ga0318576_1037688713300031796SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDDAAGAGRRPEAEDGDYGQ
Ga0318550_1005633733300031797SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEG
Ga0318565_1003317543300031799SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDDAAGAGRRPEAEDGD
Ga0318497_1028072923300031805SoilVERGDTGLGRDAYGSPRRERDHRGYGPYPLDEGYLAEEDDAAGSGRQPEAEDDDYGQLKR
Ga0318567_1029345913300031821SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYPPDEGQLVEEDDAAGSGRRAEGEADDY
Ga0318564_1009452913300031831SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYPPDEGQLVEEDDAAGPG
Ga0318499_1007951733300031832SoilVERGDTGLGRDAYGPSRRERDRRGYDPGPYPPDEDYPAEEDDPARSGRWAEAEDLD
Ga0318511_1003725233300031845SoilVERGDTGLGRDAYGPPRRERDRRASDPGLYPPDEGYQAEEDDADGPGRR
Ga0318495_1006498133300031860SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDDAAGAGRRPEAEDGDYGQL
Ga0306923_1126188313300031910SoilVERGDTGLGRDAYGLPGRERDRRGYDPEPYPIDDGYAVPSGYGEDDAAGSGRPVDIEDD
Ga0306921_1063202533300031912SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGY
Ga0306921_1228257613300031912SoilVERGDTGLGRDAYGQPRHQRDRRGYDPGPYPSDDGY
Ga0310916_1159072423300031942SoilVERGDTGLGRDAYGQPRHQRDRRGYDPGPYPSDDGYPASAEYEEDDAARPGRPVDVEEDD
Ga0306926_1268098523300031954SoilVERGDTGLGRDAYGPPRRERGRRGYSPGSYPVDDGYPDPAEEDDAAG
Ga0318530_1003949133300031959SoilVERGDTGLGRDAYGPSRRERDRRGYDPGPYPPDEDYPAEEDDPTRSGRWAEAEDLDYGQLLR
Ga0310911_1038346223300032035SoilVERGDTGLGRDAYGQPSHQRDRRGYDPGPYPSDDGYP
Ga0318556_1007813013300032043SoilVERGDTGLGRDAYGPSRRERDRRGYDPGPYPPDEDYPAEEDDPTRSG
Ga0318506_1010013613300032052SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEEDDAAGSGR
Ga0318506_1051831223300032052SoilVERGDTGLGRDAYGPPRRERDRRASDPGLYPPDEGYQ
Ga0318570_1006065313300032054SoilVERGDTGLGRDAYGPSRRERDRRGYGPGPYPQDEGYPAEE
Ga0307470_1053504023300032174Hardwood Forest SoilVERGDTGLGRDAYGPPRHERDRRGYGLGPYPSDDGHPP
Ga0335085_1118149323300032770SoilVERGDTGLGRDAYGPPRRERDHRGYDPGPYPPDEGYPA
Ga0335082_1079095123300032782SoilVERGDTGLGRDAYGPPRRQQDRRGYGPGPYPSDDGYPASAEYEEDDAAGPGRPVDVEDDYGQ
Ga0335079_1006719713300032783SoilVEPGDAGLGRDAYGLPRRQRDRRDYGPGPYPAGDGYPASEYEED
Ga0335078_1078713713300032805SoilVERGDTGLGRDAYGSPRRERDHRGYGPGPYPPDEGYPAEEDDAAGSG
Ga0335071_1013717543300032897SoilVERGDTGLGRDAYGPPRRERDRRGYGPGPYLPDEGYPAEEDDTAGPGRRLEAEDDD
Ga0335083_1061162513300032954SoilVERGDTGPGRDAYGPPRRQRDRGGYGPGPYRSDDGYSASAEYEEDDTAGPGRPVDVE
Ga0335076_1016305833300032955SoilVERGDTGLGRDAYGPSRRKRDRRGYGPGPYPQDEGYPAEEDDAAGSGRRPETED
Ga0335077_1006262313300033158SoilVERGDTGLGRDAYGPPRHERDRRGYGPGPYPSDDGYPAEDDDAAGPGRQAE
Ga0335077_1199348123300033158SoilVERGDAGLGRDAYGLPRRQRDRRDYGPGPYPAGDGYPASEYEEDDAAGSGRPVDAEEDD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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