NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F054310

Metagenome / Metatranscriptome Family F054310

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054310
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 46 residues
Representative Sequence MNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAA
Number of Associated Samples 115
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 90.71 %
% of genes near scaffold ends (potentially truncated) 99.29 %
% of genes from short scaffolds (< 2000 bps) 87.86 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.286 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.571 % of family members)
Environment Ontology (ENVO) Unclassified
(30.714 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 47.95%    β-sheet: 0.00%    Coil/Unstructured: 52.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF04085MreC 84.29
PF06723MreB_Mbl 12.14
PF13624SurA_N_3 0.71
PF04093MreD 0.71
PF04773FecR 0.71
PF01738DLH 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG1792Cell shape-determining protein MreCCell cycle control, cell division, chromosome partitioning [D] 84.29
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 12.14
COG2891Cell shape-determining protein MreDCell wall/membrane/envelope biogenesis [M] 0.71

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.29 %
UnclassifiedrootN/A0.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000580|AF_2010_repII_A01DRAFT_1064992All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis556Open in IMG/M
3300001356|JGI12269J14319_10328240All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300001867|JGI12627J18819_10314259All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300002245|JGIcombinedJ26739_101350654All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae605Open in IMG/M
3300002911|JGI25390J43892_10068741All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia818Open in IMG/M
3300004092|Ga0062389_101528683All Organisms → cellular organisms → Bacteria → Acidobacteria851Open in IMG/M
3300004099|Ga0058900_1223732All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300005172|Ga0066683_10403415All Organisms → cellular organisms → Bacteria → Acidobacteria844Open in IMG/M
3300005174|Ga0066680_10049843All Organisms → cellular organisms → Bacteria → Acidobacteria2456Open in IMG/M
3300005180|Ga0066685_10039137All Organisms → cellular organisms → Bacteria → Acidobacteria2993Open in IMG/M
3300005187|Ga0066675_11171144All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300005332|Ga0066388_108765417All Organisms → cellular organisms → Bacteria → Acidobacteria502Open in IMG/M
3300005541|Ga0070733_10653309All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300005555|Ga0066692_10349676All Organisms → cellular organisms → Bacteria → Acidobacteria938Open in IMG/M
3300005602|Ga0070762_10592840All Organisms → cellular organisms → Bacteria → Acidobacteria735Open in IMG/M
3300005764|Ga0066903_104993227All Organisms → cellular organisms → Bacteria → Acidobacteria704Open in IMG/M
3300006032|Ga0066696_10018171All Organisms → cellular organisms → Bacteria → Acidobacteria3555Open in IMG/M
3300006046|Ga0066652_100055016All Organisms → cellular organisms → Bacteria3019Open in IMG/M
3300006047|Ga0075024_100509275All Organisms → cellular organisms → Bacteria → Acidobacteria632Open in IMG/M
3300006162|Ga0075030_100037063All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4133Open in IMG/M
3300006172|Ga0075018_10585848All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300006755|Ga0079222_10901109All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300006797|Ga0066659_10542417All Organisms → cellular organisms → Bacteria → Acidobacteria938Open in IMG/M
3300006797|Ga0066659_10848912All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae760Open in IMG/M
3300006800|Ga0066660_11324929All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300006804|Ga0079221_10097580All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1436Open in IMG/M
3300007076|Ga0075435_101408145All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300007255|Ga0099791_10162042All Organisms → cellular organisms → Bacteria → Acidobacteria1048Open in IMG/M
3300007258|Ga0099793_10352339All Organisms → cellular organisms → Bacteria → Acidobacteria720Open in IMG/M
3300009088|Ga0099830_10265329All Organisms → cellular organisms → Bacteria → Acidobacteria1362Open in IMG/M
3300009088|Ga0099830_10610643All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300009088|Ga0099830_11140439All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300009088|Ga0099830_11759601All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300009089|Ga0099828_10468784All Organisms → cellular organisms → Bacteria → Acidobacteria1136Open in IMG/M
3300009090|Ga0099827_11126744All Organisms → cellular organisms → Bacteria → Acidobacteria681Open in IMG/M
3300009792|Ga0126374_10605415All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300010043|Ga0126380_11359241All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300010322|Ga0134084_10423725All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300010337|Ga0134062_10051153All Organisms → cellular organisms → Bacteria → Acidobacteria1682Open in IMG/M
3300010343|Ga0074044_10465881All Organisms → cellular organisms → Bacteria → Acidobacteria826Open in IMG/M
3300010343|Ga0074044_10855465All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300010359|Ga0126376_13268022All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300010361|Ga0126378_10224487All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1963Open in IMG/M
3300010361|Ga0126378_10445500All Organisms → cellular organisms → Bacteria → Acidobacteria1409Open in IMG/M
3300010376|Ga0126381_101946461All Organisms → cellular organisms → Bacteria → Acidobacteria847Open in IMG/M
3300011086|Ga0138564_1106895All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300011120|Ga0150983_11271308All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300011269|Ga0137392_10314220All Organisms → cellular organisms → Bacteria → Acidobacteria1296Open in IMG/M
3300011269|Ga0137392_10399002All Organisms → cellular organisms → Bacteria → Acidobacteria1141Open in IMG/M
3300011270|Ga0137391_11382430All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300012200|Ga0137382_11139824All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300012207|Ga0137381_11431412All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300012210|Ga0137378_10386739All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1298Open in IMG/M
3300012357|Ga0137384_10682082All Organisms → cellular organisms → Bacteria → Acidobacteria835Open in IMG/M
3300012359|Ga0137385_10258921All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1505Open in IMG/M
3300012407|Ga0134050_1137595All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300012918|Ga0137396_10241997All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1330Open in IMG/M
3300012918|Ga0137396_10439911All Organisms → cellular organisms → Bacteria → Acidobacteria967Open in IMG/M
3300012922|Ga0137394_10512365All Organisms → cellular organisms → Bacteria → Acidobacteria1018Open in IMG/M
3300012924|Ga0137413_11437271All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300012927|Ga0137416_10735856All Organisms → cellular organisms → Bacteria → Acidobacteria869Open in IMG/M
3300012929|Ga0137404_10369832All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1259Open in IMG/M
3300012930|Ga0137407_11788270All Organisms → cellular organisms → Bacteria → Acidobacteria586Open in IMG/M
3300012944|Ga0137410_10011818All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5922Open in IMG/M
3300012971|Ga0126369_10753572All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300014154|Ga0134075_10010509All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3563Open in IMG/M
3300014154|Ga0134075_10367248Not Available632Open in IMG/M
3300014166|Ga0134079_10515849All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300014166|Ga0134079_10672021All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300015054|Ga0137420_1168243All Organisms → cellular organisms → Bacteria → Acidobacteria1010Open in IMG/M
3300015241|Ga0137418_10846214All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300015245|Ga0137409_11271038All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300015357|Ga0134072_10036647All Organisms → cellular organisms → Bacteria → Acidobacteria1308Open in IMG/M
3300015357|Ga0134072_10075491All Organisms → cellular organisms → Bacteria → Acidobacteria990Open in IMG/M
3300017656|Ga0134112_10073181All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1265Open in IMG/M
3300017966|Ga0187776_10144605All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1457Open in IMG/M
3300017995|Ga0187816_10031221All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2160Open in IMG/M
3300020022|Ga0193733_1051890All Organisms → cellular organisms → Bacteria → Acidobacteria1158Open in IMG/M
3300020579|Ga0210407_10854733All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300020580|Ga0210403_10612853All Organisms → cellular organisms → Bacteria → Acidobacteria878Open in IMG/M
3300020580|Ga0210403_11376402All Organisms → cellular organisms → Bacteria → Acidobacteria536Open in IMG/M
3300020581|Ga0210399_11028257All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M
3300021046|Ga0215015_10117855All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300021086|Ga0179596_10080843All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1435Open in IMG/M
3300021086|Ga0179596_10184529All Organisms → cellular organisms → Bacteria → Acidobacteria1009Open in IMG/M
3300021086|Ga0179596_10322722All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300021168|Ga0210406_10015485All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7265Open in IMG/M
3300021170|Ga0210400_10180896All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1709Open in IMG/M
3300021170|Ga0210400_11475096All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300021180|Ga0210396_10245145All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1594Open in IMG/M
3300021307|Ga0179585_1167081All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300021478|Ga0210402_11690467All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300021559|Ga0210409_10038917All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4520Open in IMG/M
3300021559|Ga0210409_10636616All Organisms → cellular organisms → Bacteria → Acidobacteria936Open in IMG/M
3300022531|Ga0242660_1175108All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300024317|Ga0247660_1084759All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300026277|Ga0209350_1041695All Organisms → cellular organisms → Bacteria → Acidobacteria1344Open in IMG/M
3300026308|Ga0209265_1053645All Organisms → cellular organisms → Bacteria → Acidobacteria1238Open in IMG/M
3300026314|Ga0209268_1006070All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5252Open in IMG/M
3300026328|Ga0209802_1207904All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300026359|Ga0257163_1056066All Organisms → cellular organisms → Bacteria → Acidobacteria630Open in IMG/M
3300026537|Ga0209157_1304717All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300026551|Ga0209648_10678045All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300026551|Ga0209648_10825957All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300026555|Ga0179593_1007693All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3129Open in IMG/M
3300027034|Ga0209730_1030154All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300027565|Ga0209219_1057646All Organisms → cellular organisms → Bacteria → Acidobacteria969Open in IMG/M
3300027651|Ga0209217_1216507All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300027655|Ga0209388_1136519All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300027787|Ga0209074_10205051All Organisms → cellular organisms → Bacteria → Acidobacteria743Open in IMG/M
3300027846|Ga0209180_10623412All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300027853|Ga0209274_10025605All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2707Open in IMG/M
3300027862|Ga0209701_10190618All Organisms → cellular organisms → Bacteria → Acidobacteria1228Open in IMG/M
3300027862|Ga0209701_10530751All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300027862|Ga0209701_10557210All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300027862|Ga0209701_10693321All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300027867|Ga0209167_10815772All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300027875|Ga0209283_10012342All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5093Open in IMG/M
3300027875|Ga0209283_10239898All Organisms → cellular organisms → Bacteria → Acidobacteria1203Open in IMG/M
3300027884|Ga0209275_10209380All Organisms → cellular organisms → Bacteria → Acidobacteria1057Open in IMG/M
3300027884|Ga0209275_10345512All Organisms → cellular organisms → Bacteria → Acidobacteria833Open in IMG/M
3300027910|Ga0209583_10343855All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia692Open in IMG/M
3300028673|Ga0257175_1013335All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1283Open in IMG/M
3300028784|Ga0307282_10517576All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300031018|Ga0265773_1020441All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M
3300031057|Ga0170834_102424150All Organisms → cellular organisms → Bacteria → Acidobacteria1350Open in IMG/M
3300031446|Ga0170820_12292756All Organisms → cellular organisms → Bacteria → Acidobacteria516Open in IMG/M
3300031718|Ga0307474_10237106All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1395Open in IMG/M
3300031753|Ga0307477_10606523All Organisms → cellular organisms → Bacteria → Acidobacteria738Open in IMG/M
3300031754|Ga0307475_10524557All Organisms → cellular organisms → Bacteria → Acidobacteria950Open in IMG/M
3300031823|Ga0307478_10347213All Organisms → cellular organisms → Bacteria → Acidobacteria1222Open in IMG/M
3300031945|Ga0310913_10347776All Organisms → cellular organisms → Bacteria → Acidobacteria1049Open in IMG/M
3300031962|Ga0307479_10050493All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3997Open in IMG/M
3300031962|Ga0307479_10575694All Organisms → cellular organisms → Bacteria → Acidobacteria1108Open in IMG/M
3300032064|Ga0318510_10465916All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300032180|Ga0307471_100581575All Organisms → cellular organisms → Bacteria → Acidobacteria1277Open in IMG/M
3300032180|Ga0307471_101525166All Organisms → cellular organisms → Bacteria → Acidobacteria826Open in IMG/M
3300032955|Ga0335076_10086139All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3078Open in IMG/M
3300033412|Ga0310810_10073892All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4114Open in IMG/M
3300033412|Ga0310810_10718814All Organisms → cellular organisms → Bacteria → Acidobacteria924Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.14%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.00%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.29%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.14%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.14%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.43%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.43%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.43%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.43%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.71%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.71%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004099Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011086Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021307Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024317Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026314Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026359Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-AEnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027034Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028673Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-BEnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300031018Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A01DRAFT_106499213300000580Forest SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPLHFTRAALLDLPLLVVIY
JGI12269J14319_1032824023300001356Peatlands SoilMNDTFDIRGGELHIEVHKFRAGSIILATAFALVLQAFLPIYFPKAAILDLP
JGI12627J18819_1031425923300001867Forest SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQ
JGIcombinedJ26739_10135065413300002245Forest SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQAAFPVHFSKAAILDLPLLVT
JGI25390J43892_1006874123300002911Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFARAAVLDFPLLVTIYFGL
Ga0062389_10152868313300004092Bog Forest SoilMNDTFDIRGGELHIEVHKFRAGSIILATGFALVLQAFLPIYFPKAAI
Ga0058900_122373223300004099Forest SoilMNDAFDLRMGESHIEVHKFRTGAIIVATLLALVIQSWAPIHFAK
Ga0066683_1040341523300005172SoilMIDTFEIRGGGSHIEVHKFRAGAIIIATLLALVIQASFPVHFAR
Ga0066680_1004984343300005174SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFARAAVLDFP
Ga0066685_1003913713300005180SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAA
Ga0066675_1117114413300005187SoilMNSAFDLRIGESHIEVHKFRSGAILISALLALIIQAWLPLH
Ga0066388_10876541713300005332Tropical Forest SoilMNDTFDLRMGESHIEVHKFRTGAILIATLLALVIQAWFPLRFARAA
Ga0070733_1065330923300005541Surface SoilMNDTFDIRSSELHIEVHKFRAGAIILATAFALVLQAFLPIYFPKAAIL
Ga0066692_1034967613300005555SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPVHFARAAVLDFPLLVT
Ga0070762_1059284013300005602SoilMNDTFDIRGSELHIEVHKFRAGAIIFATAFALVLQAFLPIYFPKAAILD
Ga0066903_10499322713300005764Tropical Forest SoilMNDTFDLRMGESHIEVHKFRAGTIVISMLLMLVIQA
Ga0066696_1001817143300006032SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPLHFTRAALLDLPLLVV
Ga0066652_10005501643300006046SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQAAFPVHFSKAAILDLPLLV
Ga0075024_10050927523300006047WatershedsMNDAFDIRGESHIEVHKFRTGAIIIATLLALLVQSSFPIHFAKA
Ga0075030_10003706363300006162WatershedsMNDAFDLRIGESHIEVHKFRTGAIIIATLLALVIQSWTPIHF
Ga0075018_1058584823300006172WatershedsMNDAFDFRGAETHIEVHKFRTGAIIVTTALALLIQTAFPVYFSKA
Ga0079222_1090110913300006755Agricultural SoilMNDAFDLRIGESHIEVHKFRTGAILVATLLALLIQAWFPRHFESV
Ga0066659_1054241713300006797SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVIQSSFPIHFAKAA
Ga0066659_1084891213300006797SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAELDFPLLVTIYF
Ga0066660_1132492923300006800SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPLHFT
Ga0079221_1009758033300006804Agricultural SoilMNSAFDLRMGESHIEVHKFRTGAILIATLLALVFQA
Ga0075435_10140814513300007076Populus RhizosphereMNSAFDLRMGESHIEVHKFRTGAILIATLLALVIQAWFP
Ga0099791_1016204223300007255Vadose Zone SoilMNGTFDIRSESHIEVHKFRAGAIIIATLLALVIQASFPIHFARAAILDL
Ga0099793_1035233913300007258Vadose Zone SoilMNDAFDFRNESHIEVHKFRAGAIVIATLLALVIQASFPIHFAKAAL
Ga0099830_1026532913300009088Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPVHFARAAVLDFPLLVTIYF
Ga0099830_1061064313300009088Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVFQSSFPIHFAKAAV
Ga0099830_1114043913300009088Vadose Zone SoilMNDAFDLRIGESHIEVHKFRTGAILFATLFALVIQAWFPLRFARAT
Ga0099830_1175960113300009088Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVFQSSFPIH
Ga0099828_1046878413300009089Vadose Zone SoilMNDAFDLRLGEAHIEVHKFRGGAIVIATLLALVIQAWVPIHLPRAA
Ga0099827_1112674423300009090Vadose Zone SoilMNSAFDIRGESHIEVHKFRAGAIVIATLLALVIQSSSPVHFSKAAILDLPLLV
Ga0126374_1060541523300009792Tropical Forest SoilMNDTYDLRMGESHIEVHKFRTGAILLATLLALVIQAWFPMRIAR
Ga0126380_1135924123300010043Tropical Forest SoilMNDTFDLRSGETHIEVHKFRGGTILFATLLALFVQAFHPV
Ga0134084_1042372513300010322Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQAS
Ga0134062_1005115343300010337Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQAAFPVHF*
Ga0074044_1046588123300010343Bog Forest SoilMNDTFDIRGGELHIEVHKFRAGSIILATAFALVLQAFLPIYFPKA
Ga0074044_1085546523300010343Bog Forest SoilMNDTYDIRSSELHIEVHKFRAGAVILTAAFALVLQAFLP
Ga0126376_1326802223300010359Tropical Forest SoilMNRAFDLRISESHIEVHKFRTGAIVISMLMMLVIQAWLPLRFTRAALLDLPLLGVT
Ga0126378_1022448713300010361Tropical Forest SoilMNGAFDLRIGESHIEVHKFRTGAILISALLALVIQAWFPLHFTRASLLD
Ga0126378_1044550033300010361Tropical Forest SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPLHFTRA
Ga0126381_10194646113300010376Tropical Forest SoilMNRAFDLRISESHIEVHKFRTGAIVISMLMMLVIQAWLPLRFTRAALLDLPLLG
Ga0138564_110689513300011086Peatlands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQSSFPIHFAKAV
Ga0150983_1127130813300011120Forest SoilMNDTYDIRGSELHIEVHKFRAGAIILATAFALVLQAFLPIYFPKTSI
Ga0137392_1031422013300011269Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPVHFARAALLDFPLLVTIYFG
Ga0137392_1039900223300011269Vadose Zone SoilMIDTFEIRGGGSHIEVHKFRAGAIIIATLLALVIQASFPVHFARAAILDLP
Ga0137391_1138243013300011270Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVFQSSFPIHFAKA
Ga0137382_1113982423300012200Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAVLDFPLLVTIYFG
Ga0137381_1143141223300012207Vadose Zone SoilMNSAFDLRIGESHIEVHKFRTGAILIATLLALVIQAWFPLHFARA
Ga0137378_1038673933300012210Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQA
Ga0137384_1068208213300012357Vadose Zone SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPLHFTRAALLD
Ga0137385_1025892113300012359Vadose Zone SoilMNSAFDLRMGELHIEVHKFRTGAILISTLLALVIQAWFPLHFARMALLDLP
Ga0134050_113759513300012407Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFARAAVLDF
Ga0137396_1024199713300012918Vadose Zone SoilMNDAFDLRGESHIEVHKFRVGAIIIATLLALVIQASFPIHFAKAAILDFP
Ga0137396_1043991113300012918Vadose Zone SoilMNGAFEIRGESHIEVHKFRAGAIIVATLLALVIQSSFPIH
Ga0137394_1051236523300012922Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPLHFARAAVLDF
Ga0137413_1143727113300012924Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIAATLLALVFQSSFPIHFAKAAVLDLPLL
Ga0137416_1073585623300012927Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVFQSSFPIHFAK
Ga0137404_1036983213300012929Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAVLDFPL
Ga0137407_1178827013300012930Vadose Zone SoilMKDAFDIRGESHIEVHKFRVGVIIIATLLALVIQASFPIH
Ga0137410_1001181813300012944Vadose Zone SoilMNDAFDLRIGESHIEVHKFRGGTILFATALALFVQA
Ga0126369_1075357213300012971Tropical Forest SoilMNDTFDLRIGESHIEVHKFRTGAILISMLLMLVIQAWLPLGFTRAALLDFPFLGVTYFGL
Ga0134075_1001050953300014154Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFP
Ga0134075_1036724813300014154Grasslands SoilMNEAFDTRGESHIEVHKFRAGAITIVTLLTLVIQASFPIHFAKTAVLDFPLLVTIY
Ga0134079_1051584923300014166Grasslands SoilMNGAFDLRMGESHIEVHKFRTGAILIATLLALVIQAWFPLHFAR
Ga0134079_1067202113300014166Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAVLDFPLLVTIY
Ga0137420_116824323300015054Vadose Zone SoilMNEAFDIRGESHIEVHKFRAGAIIIATLLALVIQAAFPVH
Ga0137418_1084621413300015241Vadose Zone SoilMNDAFDMRGESHIEVHKFRAGAIIIATLLALVIQASFPIHF
Ga0137409_1127103813300015245Vadose Zone SoilMNDTFDIRSSELHIEVHKFRAGAIIFATVFALVLQAFLPI
Ga0134072_1003664713300015357Grasslands SoilMNGAFDLRMGESHIEVHKFRTGAILIATLLALVIQAWFPLHFARMALLDLPLL
Ga0134072_1007549113300015357Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAV
Ga0134112_1007318113300017656Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVIQSSFPIHFAKAAVLDLP
Ga0187776_1014460513300017966Tropical PeatlandMNDAFDLRISESHIEVHKFRAGAIIIATLLALVIQA
Ga0187816_1003122113300017995Freshwater SedimentMIDTYDIRGGESHIEVHKFRAGAIIIATLLALVIQTWTPVHLSKAALLD
Ga0193733_105189013300020022SoilMNEAFDIRGESHIEVHKFRTGAIIVATLLALVIQA
Ga0210407_1085473313300020579SoilMNGAFDIRGESHIEVHKFRAGAIIIATLLALLIQSSFPVHFSKAAILDL
Ga0210403_1061285323300020580SoilMNDTYDIRSSDMHIEVHKFRAGAIVLAAAFALVLQAFLPIYFSKA
Ga0210403_1137640223300020580SoilVNDAFDFRAAETHIEVHKFRTGAIIVTTVLALLIQTAFPVYFSKAAI
Ga0210399_1102825723300020581SoilMNDAFDIRGGELHIEVHKFRAGAIILATAFALVLQAFLPIYFSKA
Ga0215015_1011785513300021046SoilMNGAFDIRGGETHIEVHKFRGGAIVIATLLALVFQASFPVSYTH
Ga0179596_1008084313300021086Vadose Zone SoilMKDAFDIRGESHIEVHKFRVGAIIIATLLALVIQASFPIHFAKAAVLDFP
Ga0179596_1018452923300021086Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVFQSSFPIHFAKAAVLDLP
Ga0179596_1032272213300021086Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQSSFPIHFAKAAVL
Ga0210406_1001548513300021168SoilMNDAFDIRGSELHIEVHKFRAGAIILATAFALVLQAFLP
Ga0210400_1018089633300021170SoilMMNDAFDLRLAETHIEVHKFRAGAIVGATFLALML
Ga0210400_1147509613300021170SoilMNDAFDIRGESHIEVHKFRTGAIIIATLLALLIQSSFPIHFAKAAVLDFPLLVTI
Ga0210396_1024514513300021180SoilMNDTYDIRGSELHIEVHKFRAGAIILATAFALVLQAFLPIYFPK
Ga0179585_116708123300021307Vadose Zone SoilMNDAFDMRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFTKAAI
Ga0210402_1169046723300021478SoilMNDTYDIRGSELHIEVHKFRAGAIILATAFALVLQAFLPIYFPKASILDL
Ga0210409_1003891713300021559SoilMNDTFDIRGSELHIEVHKFRAGAIIFATAFALVLQAFLPIYIPKAA
Ga0210409_1063661613300021559SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASF
Ga0242660_117510823300022531SoilMNGAFDIRGESHIEVHKFRVGAIIIATLMALVIQTWTP
Ga0247660_108475913300024317SoilMNDTYDIRISDMHIEVHKFRAGAIVLAAAFALVLQAFLPIYFSK
Ga0209350_104169533300026277Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFARA
Ga0209265_105364533300026308SoilMNGAFDLRMGESHIEVHKFRTGAILIATLLALVIQAWFPLHFARMA
Ga0209268_100607013300026314SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPLHFTRAALLDLPLLVVI
Ga0209802_120790423300026328SoilMNDAFDLRLGEAHIEVHKFRGGAIVIATLLALVIQAW
Ga0257163_105606623300026359SoilMNEAFDIRGESHIEVHKFRAGAIIIATLLALVIQAAFP
Ga0209157_130471723300026537SoilMNDAFDIRGESHIEVHKFRAGAIIVATLLALVIQSSFPIHFAKAAVLD
Ga0209648_1067804513300026551Grasslands SoilMNGTFDIRSESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAILDLPLLVTI
Ga0209648_1082595723300026551Grasslands SoilMNDAFDIRGESHIEVHKFRAGAIVIATLLALVIQSSSPVHFS
Ga0179593_100769353300026555Vadose Zone SoilMNGAFDIRGESHIEVHKFRLGTIIIATLMALVIQTWT
Ga0209730_103015423300027034Forest SoilMNDAFDLRIGETHIEVHKFRAGAILIVTLLALVMQAWVPL
Ga0209219_105764623300027565Forest SoilMNDTYDIRGSELHIEVHKFRAGAIVVATALALVLQAF
Ga0209217_121650723300027651Forest SoilMNGTFDIRSESHIEVHKFRTGAIIIATLLALVIQAS
Ga0209388_113651913300027655Vadose Zone SoilMNDAFDMRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFSK
Ga0209074_1020505123300027787Agricultural SoilMSSAFDLRMGESHIEVHKFRTGAILIATLLALVIQAWFPLHFARLALLDLP
Ga0209180_1062341223300027846Vadose Zone SoilMNDAFDLRLGEAHIEVHKFRGGAIVIATLLALVIQ
Ga0209274_1002560543300027853SoilMNDAFDIRGSELHIEVHKFRAGAIILATAFALVLQAFLPIYFSKAAILDL
Ga0209701_1019061833300027862Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAILIATLLALVIQAAFPVHFSKAAILDLPL
Ga0209701_1053075123300027862Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLMALVIQTWTPVHFSKAALLDLPLL
Ga0209701_1055721013300027862Vadose Zone SoilMNDAFDIRGESHIEVHKFRVGAIIIATLMALVIQTWTPVHFSKAALLDLPLL
Ga0209701_1069332123300027862Vadose Zone SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQASFPIHFAKAAVLDLPLLV
Ga0209167_1081577213300027867Surface SoilMNDTFDIRSSELHIEVHKFRAGAIILATAFALVLQAFLPIYFPKAAILDLP
Ga0209283_1001234213300027875Vadose Zone SoilMNDAFDLRIGESHIEVHKFRTGAILIATLFALVIQAWFPL
Ga0209283_1023989823300027875Vadose Zone SoilMNDAFDLRLGEAHIEVHKFRGGAIVIATLLALVIQAWVPIHLPRAAILDLPL
Ga0209275_1020938013300027884SoilMNDTYDIRSSELHIEVHKFRAGAIIFATAFALVLQAFL
Ga0209275_1034551213300027884SoilMNDTFDIRGSELHIEVHKFRAGAIIFATAFALVLQAFLPIYFP
Ga0209583_1034385523300027910WatershedsMMNDTFDLAGAESHIEVHKFRGGAIVVATCFALLVQALIPIYFPKA
Ga0257175_101333533300028673SoilMINDAFDLRSTELHIEVHKFRTGAVAAATIFALVVQA
Ga0307282_1051757623300028784SoilMNDAFDIRGESHIEVHKFRAGAILIATLLALVIQAAFP
Ga0265773_102044113300031018SoilMNDTYDIRGSELHIEVHKFRAGAIILATAFALVLQAFLPIYFPKASILDLPL
Ga0170834_10242415013300031057Forest SoilMNDAFDIRGSELHIEVHKFRAGAIILATAFALVLQAFLPIYIPKAAILDLP
Ga0170820_1229275613300031446Forest SoilMNDAFDIRGESHIEVHKFRTGAIIIATLLALLIQSSFPIHFAKAAVLDFPLLVTIYF
Ga0307474_1023710633300031718Hardwood Forest SoilMNDAFDLRIGESHIEVHKFRTGAILIATLLALVVQTWTPVHFSKAALLDLPLLVTI
Ga0307477_1060652323300031753Hardwood Forest SoilMNDTFDIRSSELHIEVHKFRAGSIILATAFALVLQAFLPIYFPKA
Ga0307475_1052455713300031754Hardwood Forest SoilMMNDTFDLAGAESHIEVHKFRGGAIVLATGFALLVQAL
Ga0307478_1034721313300031823Hardwood Forest SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALVIQSSFPIHFAKAAVLDLPL
Ga0310913_1034777613300031945SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPMHFTRAALLDLPLLVVIYL
Ga0307479_1005049343300031962Hardwood Forest SoilMNDAFDIRGESHIEVHKFRGGAIIVATLLALVIQAALPVHFSKA
Ga0307479_1057569413300031962Hardwood Forest SoilMNDAFDIRGESHIEVHKFRAGAIIIATLLALLIQS
Ga0318510_1046591613300032064SoilMNRAFDLRMGESHIEVYKFRTGAIPIATLLALVIQAWLPMHFTRAALLDLP
Ga0307471_10058157523300032180Hardwood Forest SoilMNDAFDLRIGESHIEVHKFRGGTILFATALALFVQAFLPVYF
Ga0307471_10152516623300032180Hardwood Forest SoilMMNDAFDLRLAETHIEVHKFRAGAIVGATFLALMLQA
Ga0335076_1008613913300032955SoilMNINDTFDIRVGETHIEVHKFRTGAVFLAAGLALVLQAFLPVYFPKAAI
Ga0310810_1007389253300033412SoilMNDAYDIRSSELHIEVHKFRAGAIVLATAFALVLQAFVPV
Ga0310810_1071881413300033412SoilMNDTYDIRSSELHIEVHKFRAGAIVLATVFALVLQAFVPVYFPRAGILDLPLL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.