Metagenome / Metatranscriptome Family F054299

Basic Information
Family ID	F054299
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	74 residues
Representative Sequence	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV
Number of Associated Samples	108
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	63.57 %
% of genes near scaffold ends (potentially truncated)	32.86 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (65.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (23.571 % of family members)
Environment Ontology (ENVO)	Unclassified (35.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.86% β-sheet: 16.22% Coil/Unstructured: 68.92%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00892	EamA	7.19
PF07883	Cupin_2	6.47
PF00999	Na_H_Exchanger	5.76
PF13360	PQQ_2	2.88
PF13302	Acetyltransf_3	2.16
PF13191	AAA_16	1.44
PF01345	DUF11	1.44
PF01568	Molydop_binding	1.44
PF08281	Sigma70_r4_2	0.72
PF13570	PQQ_3	0.72
PF02666	PS_Dcarbxylase	0.72
PF00589	Phage_integrase	0.72
PF00005	ABC_tran	0.72
PF01011	PQQ	0.72
PF01904	DUF72	0.72
PF12840	HTH_20	0.72
PF02738	MoCoBD_1	0.72
PF00361	Proton_antipo_M	0.72
PF08530	PepX_C	0.72
PF03734	YkuD	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	5.76
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	5.76
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	5.76
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	5.76
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	5.76
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.72
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.72
COG2936	Predicted acyl esterase	General function prediction only [R]	0.72
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
All Organisms	root	All Organisms	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
cellular organisms	root	All Organisms → cellular organisms	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15.00 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.71 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.71 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.14 %
Erwiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae	0.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.14 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Erwiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10989818	Not Available	533	Open in IMG/M
3300002568\|C688J35102_118833540	Not Available	602	Open in IMG/M
3300002568\|C688J35102_120714973	Not Available	1406	Open in IMG/M
3300002568\|C688J35102_120967063	All Organisms → cellular organisms → Bacteria	3512	Open in IMG/M
3300004081\|Ga0063454_101968109	Not Available	516	Open in IMG/M
3300004114\|Ga0062593_100415207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1210	Open in IMG/M
3300004156\|Ga0062589_102778330	Not Available	510	Open in IMG/M
3300005103\|Ga0066813_1003085	Not Available	763	Open in IMG/M
3300005164\|Ga0066815_10087795	Not Available	569	Open in IMG/M
3300005331\|Ga0070670_100225948	Not Available	1629	Open in IMG/M
3300005336\|Ga0070680_101976239	Not Available	505	Open in IMG/M
3300005340\|Ga0070689_100787256	Not Available	836	Open in IMG/M
3300005356\|Ga0070674_100936278	Not Available	757	Open in IMG/M
3300005365\|Ga0070688_101669044	Not Available	521	Open in IMG/M
3300005434\|Ga0070709_10394559	Not Available	1032	Open in IMG/M
3300005434\|Ga0070709_10760469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	758	Open in IMG/M
3300005434\|Ga0070709_11438400	Not Available	559	Open in IMG/M
3300005434\|Ga0070709_11678615	Not Available	518	Open in IMG/M
3300005435\|Ga0070714_100151598	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300005435\|Ga0070714_100570162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300005436\|Ga0070713_100449729	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005436\|Ga0070713_100646573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1007	Open in IMG/M
3300005437\|Ga0070710_11278451	Not Available	545	Open in IMG/M
3300005439\|Ga0070711_100080350	All Organisms → cellular organisms → Bacteria → Proteobacteria	2321	Open in IMG/M
3300005439\|Ga0070711_100082238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2298	Open in IMG/M
3300005439\|Ga0070711_100675987	Not Available	867	Open in IMG/M
3300005439\|Ga0070711_101007456	Not Available	715	Open in IMG/M
3300005439\|Ga0070711_101567315	Not Available	575	Open in IMG/M
3300005454\|Ga0066687_10853799	Not Available	542	Open in IMG/M
3300005456\|Ga0070678_102309098	Not Available	511	Open in IMG/M
3300005458\|Ga0070681_10055791	All Organisms → cellular organisms → Bacteria	3933	Open in IMG/M
3300005467\|Ga0070706_100798147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300005543\|Ga0070672_101281465	Not Available	654	Open in IMG/M
3300005544\|Ga0070686_101222756	Not Available	625	Open in IMG/M
3300005546\|Ga0070696_100775072	Not Available	788	Open in IMG/M
3300005563\|Ga0068855_100252043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1969	Open in IMG/M
3300005617\|Ga0068859_102937773	Not Available	522	Open in IMG/M
3300005719\|Ga0068861_100451549	Not Available	1152	Open in IMG/M
3300005764\|Ga0066903_101586676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300005841\|Ga0068863_100340640	Not Available	1459	Open in IMG/M
3300006173\|Ga0070716_100127643	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300006173\|Ga0070716_101465757	Not Available	557	Open in IMG/M
3300006175\|Ga0070712_100063071	All Organisms → cellular organisms → Bacteria	2622	Open in IMG/M
3300006175\|Ga0070712_101176530	Not Available	667	Open in IMG/M
3300006175\|Ga0070712_101649816	Not Available	561	Open in IMG/M
3300006175\|Ga0070712_102059364	Not Available	500	Open in IMG/M
3300006573\|Ga0074055_10011319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300006573\|Ga0074055_11526985	Not Available	520	Open in IMG/M
3300006574\|Ga0074056_11669427	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300006578\|Ga0074059_10952302	Not Available	598	Open in IMG/M
3300006603\|Ga0074064_11724354	Not Available	555	Open in IMG/M
3300006605\|Ga0074057_12010661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	903	Open in IMG/M
3300006605\|Ga0074057_12036601	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300006953\|Ga0074063_10089989	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300009101\|Ga0105247_11754678	Not Available	515	Open in IMG/M
3300009545\|Ga0105237_10048288	All Organisms → cellular organisms → Bacteria	4278	Open in IMG/M
3300010044\|Ga0126310_10682916	Not Available	776	Open in IMG/M
3300010371\|Ga0134125_12666145	Not Available	543	Open in IMG/M
3300010373\|Ga0134128_10176259	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300011106\|Ga0151489_1120172	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300011119\|Ga0105246_12594741	Not Available	500	Open in IMG/M
3300012915\|Ga0157302_10015746	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300012951\|Ga0164300_10137371	Not Available	1128	Open in IMG/M
3300012955\|Ga0164298_10753532	Not Available	690	Open in IMG/M
3300012957\|Ga0164303_10506712	Not Available	774	Open in IMG/M
3300012958\|Ga0164299_10092592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1549	Open in IMG/M
3300012958\|Ga0164299_10449987	Not Available	842	Open in IMG/M
3300012961\|Ga0164302_10013474	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300012961\|Ga0164302_10431051	Not Available	910	Open in IMG/M
3300012984\|Ga0164309_10562065	Not Available	884	Open in IMG/M
3300012985\|Ga0164308_10040289	All Organisms → cellular organisms → Bacteria	2937	Open in IMG/M
3300012986\|Ga0164304_10054617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2192	Open in IMG/M
3300012986\|Ga0164304_10698022	Not Available	770	Open in IMG/M
3300012987\|Ga0164307_10153170	Not Available	1520	Open in IMG/M
3300012987\|Ga0164307_10446968	Not Available	964	Open in IMG/M
3300012987\|Ga0164307_11465242	Not Available	576	Open in IMG/M
3300012988\|Ga0164306_10216550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300012989\|Ga0164305_10335363	Not Available	1132	Open in IMG/M
3300013296\|Ga0157374_10046559	All Organisms → cellular organisms → Bacteria	4017	Open in IMG/M
3300013296\|Ga0157374_11620406	Not Available	671	Open in IMG/M
3300013297\|Ga0157378_11616946	Not Available	694	Open in IMG/M
3300013307\|Ga0157372_10577062	Not Available	1311	Open in IMG/M
3300015371\|Ga0132258_11286368	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300015373\|Ga0132257_102111094	Not Available	728	Open in IMG/M
3300015374\|Ga0132255_101102333	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300017927\|Ga0187824_10357336	Not Available	528	Open in IMG/M
3300019361\|Ga0173482_10605140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300025315\|Ga0207697_10535774	Not Available	515	Open in IMG/M
3300025321\|Ga0207656_10539123	Not Available	594	Open in IMG/M
3300025898\|Ga0207692_10874183	Not Available	590	Open in IMG/M
3300025899\|Ga0207642_10846666	Not Available	584	Open in IMG/M
3300025906\|Ga0207699_10165541	Not Available	1475	Open in IMG/M
3300025911\|Ga0207654_10438763	Not Available	914	Open in IMG/M
3300025911\|Ga0207654_10527376	Not Available	837	Open in IMG/M
3300025913\|Ga0207695_10710744	Not Available	885	Open in IMG/M
3300025914\|Ga0207671_10349733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300025915\|Ga0207693_10066677	Not Available	2818	Open in IMG/M
3300025915\|Ga0207693_10074637	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2656	Open in IMG/M
3300025915\|Ga0207693_10145685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1862	Open in IMG/M
3300025915\|Ga0207693_10708342	Not Available	779	Open in IMG/M
3300025915\|Ga0207693_10708342	Not Available	779	Open in IMG/M
3300025916\|Ga0207663_10140446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1682	Open in IMG/M
3300025916\|Ga0207663_11202649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300025916\|Ga0207663_11654058	Not Available	515	Open in IMG/M
3300025917\|Ga0207660_10420183	Not Available	1078	Open in IMG/M
3300025920\|Ga0207649_11283598	Not Available	579	Open in IMG/M
3300025924\|Ga0207694_10990657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae	711	Open in IMG/M
3300025927\|Ga0207687_11538124	Not Available	571	Open in IMG/M
3300025928\|Ga0207700_10696903	Not Available	906	Open in IMG/M
3300025929\|Ga0207664_10270378	Not Available	1489	Open in IMG/M
3300025929\|Ga0207664_10993884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
3300025934\|Ga0207686_11575401	Not Available	542	Open in IMG/M
3300025935\|Ga0207709_10969212	Not Available	694	Open in IMG/M
3300025937\|Ga0207669_10614919	Not Available	885	Open in IMG/M
3300025939\|Ga0207665_10087628	All Organisms → cellular organisms → Bacteria	2152	Open in IMG/M
3300025939\|Ga0207665_10220254	Not Available	1390	Open in IMG/M
3300025940\|Ga0207691_10703671	All Organisms → cellular organisms → Bacteria → Terrabacteria group	852	Open in IMG/M
3300026035\|Ga0207703_10424725	Not Available	1237	Open in IMG/M
3300026116\|Ga0207674_11746900	Not Available	590	Open in IMG/M
3300026118\|Ga0207675_100354408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1438	Open in IMG/M
3300026121\|Ga0207683_11498745	Not Available	623	Open in IMG/M
3300027401\|Ga0208637_1046281	Not Available	513	Open in IMG/M
3300027775\|Ga0209177_10007721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2301	Open in IMG/M
3300028379\|Ga0268266_10707400	Not Available	971	Open in IMG/M
3300028768\|Ga0307280_10121246	Not Available	885	Open in IMG/M
3300028784\|Ga0307282_10120599	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300028828\|Ga0307312_11200180	Not Available	502	Open in IMG/M
3300028884\|Ga0307308_10210814	Not Available	931	Open in IMG/M
3300031170\|Ga0307498_10153295	Not Available	767	Open in IMG/M
3300031366\|Ga0307506_10007810	Not Available	2225	Open in IMG/M
3300031640\|Ga0318555_10703768	Not Available	546	Open in IMG/M
3300031740\|Ga0307468_100740152	Not Available	829	Open in IMG/M
3300031771\|Ga0318546_10198709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1369	Open in IMG/M
3300031782\|Ga0318552_10665179	Not Available	531	Open in IMG/M
3300031894\|Ga0318522_10235521	Not Available	694	Open in IMG/M
3300031938\|Ga0308175_100760839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1057	Open in IMG/M
3300031996\|Ga0308176_11155321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300032074\|Ga0308173_10311651	Not Available	1357	Open in IMG/M
3300032094\|Ga0318540_10498574	Not Available	588	Open in IMG/M
3300032174\|Ga0307470_10280920	Not Available	1118	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.57%
Host-Associated	Host-Associated	26.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.86%
Plants	Host-Associated → Plants	26.43%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.71%
Freshwater	Environmental → Aquatic → Freshwater	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.86%
Loam	Environmental → Terrestrial → Soil → Loam	35.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.14%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	30.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	23.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.14%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.14%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.14%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.71%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_109898182	3300001686	Soil	MHGLKNRLTWYRLRDPGHPERIYGDDIDDAEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGAPVDPGPTAPVG*
C688J35102_1188335402	3300002568	Soil	MSELEKHLTWYRLRDPGRPDYVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIG*
C688J35102_1207149731	3300002568	Soil	MYVLKNRLTWYRLRDPGHHECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVG*
C688J35102_1209670635	3300002568	Soil	MHGLKNRLTWYRLRDPGHPECIYGDDIDDAEHAFRRAAKLAGFYQRPVEVCHVVGGRLVRPVGAPVDPGPTAPVG*
Ga0063454_1019681092	3300004081	Soil	MKELKKHLTWYRLRDPGRPDHVYGDEIADEQLAFRRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0062593_1004152072	3300004114	Soil	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0062589_1027783302	3300004156	Soil	RLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0066813_10030852	3300005103	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIVDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVG*
Ga0066815_100877952	3300005164	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIDDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPV
Ga0070670_1002259481	3300005331	Switchgrass Rhizosphere	MKEFKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0070680_1019762391	3300005336	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG*
Ga0070689_1007872564	3300005340	Switchgrass Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0070674_1009362781	3300005356	Miscanthus Rhizosphere	RDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG*
Ga0070688_1016690442	3300005365	Switchgrass Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKIARPVGIPVEPGPTAPIS*
Ga0070709_103945591	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLKNRLTWYRLRDPGRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPT
Ga0070709_107604692	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRAPGHPDNVYGDEIADERLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0070709_114384002	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIS*
Ga0070709_116786152	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PSHRFPTWLMHSPAMNVLRRRLTWYRLRDPLNQDEVYGDEIDDKWTAFQRAAKLADFYQHPIEVCEVVGGRFVRPVAAPVVPGPTAPTEG*
Ga0070714_1001515982	3300005435	Agricultural Soil	MHGFKNRFTWYRLRDPGQPDCIYGDDIDDEDDAFRRAEKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVS*
Ga0070714_1005701622	3300005435	Agricultural Soil	MHGLKNRLTWYRLRDPGHPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0070713_1004497292	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MHGFKNRLTWYRLRDPGQPDCIYGDDIDDEDDAFRRAEKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVS*
Ga0070713_1006465732	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGHPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0070710_112784512	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHGFKNRLTWYRLRDPGQPDCIYGDDIDDEDDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVS*
Ga0070711_1000803504	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPARPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPI*
Ga0070711_1000822382	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLKNRLTWYRLRDPGQPGCIYGDDIDDEQDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVEPGPTAPVG*
Ga0070711_1006759872	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLKKHLTWYRLRDPSRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIS*
Ga0070711_1010074561	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MHGFKNRLTWYRLRDPGQPDCIYGDDIDDEDDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPG
Ga0070711_1015673152	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRAPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGKIARPVGIPVEPGPTAPIR*
Ga0066687_108537991	3300005454	Soil	DPGRPDNVYGDEIADEQLAFERAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIR*
Ga0070678_1023090981	3300005456	Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIR*
Ga0070681_100557913	3300005458	Corn Rhizosphere	MHGLKNRLTWYRLRDPGRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG*
Ga0070706_1007981473	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLKKHLTWYRLRDPSRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0070672_1012814651	3300005543	Miscanthus Rhizosphere	LTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0070686_1012227562	3300005544	Switchgrass Rhizosphere	RVMHGLKNRLTWYRLRDPGRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV*
Ga0070696_1007750724	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRAPGHPDNVYGDEIADERLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPT
Ga0068855_1002520433	3300005563	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPERIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV*
Ga0068859_1029377732	3300005617	Switchgrass Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGAPV
Ga0068861_1004515491	3300005719	Switchgrass Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVR*
Ga0066903_1015866764	3300005764	Tropical Forest Soil	MTVSSEPRSALRRRLTWYRLRDPARPDQVFGDEIDDQRAALQRAARLADFYQHPIEVCEVVGGRLVRPVAAPVAPGPTAPVG*
Ga0068863_1003406402	3300005841	Switchgrass Rhizosphere	MKEFKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIS*
Ga0070716_1001276432	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLKNRLTWYRLRDPGRPGCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG*
Ga0070716_1014657572	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRAPGHPDNVYGDEIADERLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVGPGPTAPIR*
Ga0070712_1000630712	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPARPDNVYGDGIADEQLAFQRAAKLAGFYQQPIEVCRVVGGRLARPVGIPVQPGPTAPTG*
Ga0070712_1011765302	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLKNRLTWYRLRDPGRPGCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGAPVDPGPTAPVG*
Ga0070712_1016498161	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LKNRLTWYRLRDPGHPECIYGDEIDDEEVAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPLG*
Ga0070712_1020593641	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLKNRLTWYRLRDPRHPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVG*
Ga0074055_100113191	3300006573	Soil	TWYRLRDPDRPDNVYGDEIPDEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0074055_115269852	3300006573	Soil	MHGLKNRLTWYRLRDPGHHECIYGDDIDDEQDAFRRAEKLAGFYQRPVEVCHVIGGGLVRPVGIPVDPGPTAPVG*
Ga0074056_116694272	3300006574	Soil	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0074059_109523021	3300006578	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIVDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVG
Ga0074064_117243542	3300006603	Soil	MHRLKNRLTWYRLRDPGRPECIFGDDIDDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVG*
Ga0074057_120106611	3300006605	Soil	LTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0074057_120366011	3300006605	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIVDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPV
Ga0074063_100899893	3300006953	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIVDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTA
Ga0105247_117546781	3300009101	Switchgrass Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKIARPVG
Ga0105237_100482886	3300009545	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTSVDPGPTAPVG*
Ga0126310_106829162	3300010044	Serpentine Soil	MHRLKNRLTWYRLRDPGQPDCIYGDDIDGQEDAFRRAAKLAGFYQRPVEVCHVIGGRLVRPVGTPVDPGPTAPVG*
Ga0134125_126661451	3300010371	Terrestrial Soil	EGSRVMHGLKNRLTWYRLRDPGQPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0134128_101762596	3300010373	Terrestrial Soil	DPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0151489_11201722	3300011106	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIDDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVG*
Ga0105246_125947412	3300011119	Miscanthus Rhizosphere	TWYRLRDPGHPERIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV*
Ga0157302_100157463	3300012915	Soil	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAMLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0164300_101373712	3300012951	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIDDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVS*
Ga0164298_107535321	3300012955	Soil	MKELKKHLTWYRLRDPARPDNVYGDGIADEQLAFQRAAKLAGFYQQPIEVCRVVGGRLARPVGIP
Ga0164303_105067122	3300012957	Soil	MHRLKNRLTWYRLRDPRRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVG*
Ga0164299_100925922	3300012958	Soil	TWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0164299_104499872	3300012958	Soil	MHGLKNLLTWYRLRDPGRPECIFGDDIDDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVS*
Ga0164302_100134742	3300012961	Soil	MKELTKHLTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0164302_104310511	3300012961	Soil	MKELKKHLTWYRLRDPDRPDNVYGDEIPDEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVQPGPTAPTG*
Ga0164309_105620652	3300012984	Soil	MHVFKNRLTWYRLRDPGQPDCIYGDVIDDEDDAFRRAEKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVS*
Ga0164308_100402894	3300012985	Soil	EGSRVMHGLKNRLTWYRLRDPGRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG*
Ga0164304_100546171	3300012986	Soil	MKELKKHLTWYRLRAPGHPDNVYGDEIANERLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0164304_106980222	3300012986	Soil	MHRLKNRLTWYRLRDPRRPECIYGDDIDDEQDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVG*
Ga0164307_101531702	3300012987	Soil	MHVFKNRLTWYRLRDPGQPDCIYGDDIDDEDDAFRRAEKLAGFYQRPVEVCHVIGGGLVRPVGAPVDPGPTAPVG*
Ga0164307_104469682	3300012987	Soil	MHRLKNRLTWYRLRDPRRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPVPTAPVG*
Ga0164307_114652422	3300012987	Soil	MHGLKNRLTWYRLRDPGRPECIFGDDIVDEEDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVS*
Ga0164306_102165501	3300012988	Soil	MHRLKNRLTWYRLRDPRRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPT
Ga0164305_103353632	3300012989	Soil	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPIGIPVEPGPTAPIR*
Ga0157374_100465591	3300013296	Miscanthus Rhizosphere	MKEFKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPREVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0157374_116204061	3300013296	Miscanthus Rhizosphere	TWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG*
Ga0157378_116169462	3300013297	Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIS*
Ga0157372_105770624	3300013307	Corn Rhizosphere	MKEFKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGSLARPFGIPVEPGPTAPIR*
Ga0132258_112863682	3300015371	Arabidopsis Rhizosphere	MHGLKNRLTWYRLRDPGRPECIYGDDIDDERDAFRRATKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVG*
Ga0132257_1021110942	3300015373	Arabidopsis Rhizosphere	MKELKKHLTWYRLRAPGSPDSVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR*
Ga0132255_1011023332	3300015374	Arabidopsis Rhizosphere	MKELKKHLTWYRLRAPGHPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRIARPVGIPVEPGPTAPIR*
Ga0187824_103573362	3300017927	Freshwater Sediment	LMHSQAMNVLRRRLTWYRLRDPLNRDEVYGDEIDDKWTAFQRAAKLADFYQHPIEVCEVVGGRFVRPVAAPVVPGPTAPIEG
Ga0173482_106051401	3300019361	Soil	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTP
Ga0207697_105357742	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKEFKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0207656_105391232	3300025321	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG
Ga0207692_108741832	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MHGFKNRLTWYRLRDPGQPDCIYGDDIDDEDDAFRRAAKLAGFYQRPVEVCRVIGGGLVRPVGTPVDPGPTAPVS
Ga0207642_108466662	3300025899	Miscanthus Rhizosphere	KKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIS
Ga0207699_101655411	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLKNRLTWYRLRDPGRPGCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGAPVDPGPNAPVG
Ga0207654_104387631	3300025911	Corn Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPV
Ga0207654_105273761	3300025911	Corn Rhizosphere	VMHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG
Ga0207695_107107441	3300025913	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPERIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVG
Ga0207671_103497331	3300025914	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV
Ga0207693_100666775	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPARPDNVYGDGIADEQLAFQRAAKLAGFYQQPIEVCRVVGGRLARPVGIPVQPGPTAPTG
Ga0207693_100746373	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLKNRLTWYRLRDPRHPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVG
Ga0207693_101456852	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKIARPVGIPVEPGPTAPIR
Ga0207693_107083421	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNVLTNRLTWYRLRDPWHHDRVYGDGIDDEQVAFRRAAKLAGFYQRPVEVCRIAGDRPAHPVGTLVEP
Ga0207693_107083422	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLKNRLTWYRLRDPGHPECIYGDEIDDEEVAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPLG
Ga0207663_101404462	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MHGLKNRLTWYRLRDPGHPERIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV
Ga0207663_112026492	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGHPDNVYGDEIADEQMAFERAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0207663_116540581	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLKKHLTWYRLRDPSRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0207660_104201832	3300025917	Corn Rhizosphere	MHGLKNRLTWYRLRDPGRPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG
Ga0207649_112835982	3300025920	Corn Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIR
Ga0207694_109906571	3300025924	Corn Rhizosphere	MKDLKKHLTWYRLRDPSRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEP
Ga0207687_115381243	3300025927	Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0207700_106969031	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HRLKNRLTWYRLRDPRHPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVS
Ga0207664_102703782	3300025929	Agricultural Soil	MHGFKNRLTWYRLRDPGQPDCIYGDDIDDEDDAFRRAEKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVS
Ga0207664_109938842	3300025929	Agricultural Soil	MHGLKNRLTWYRLRDPGHPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGAPVDPGPTAP
Ga0207686_115754012	3300025934	Miscanthus Rhizosphere	RLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG
Ga0207709_109692123	3300025935	Miscanthus Rhizosphere	DPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPV
Ga0207669_106149192	3300025937	Miscanthus Rhizosphere	MKELKKHLTWYRLRAPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIS
Ga0207665_100876283	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGHPDNVYGDEIADEQVAFERAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0207665_102202542	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGKIARPVGIPVEPGPTAPIR
Ga0207691_107036712	3300025940	Miscanthus Rhizosphere	KELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0207703_104247251	3300026035	Switchgrass Rhizosphere	LMKELKKHLTWYRLRDPGRPDNVYGDEIADEQVAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIS
Ga0207674_117469001	3300026116	Corn Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLERPVGTPVDPGPTAPVG
Ga0207675_1003544082	3300026118	Switchgrass Rhizosphere	MHGLKNRLTWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVR
Ga0207683_114987452	3300026121	Miscanthus Rhizosphere	MKELKKHLTWYRLRDPGRPDNVYGDEIADERLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0208637_10462812	3300027401	Soil	VCAMKELKKHLTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0209177_100077211	3300027775	Agricultural Soil	TWYRLRDPGHPDCIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPVG
Ga0268266_107074002	3300028379	Switchgrass Rhizosphere	MKDLKKHLTWYRLRDPSRPDNVYGDEIADEQLAFQRAAKLAGFYQQPIEVCKVVGGKLARPVGIPVEPGPTAPIS
Ga0307280_101212462	3300028768	Soil	ELKKHLTWYRLRDPDRPDNVYGDEIPDEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0307282_101205992	3300028784	Soil	MKELKKHLTWYRLRDPDRPDNVYGDEIPDEQVAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0307312_112001801	3300028828	Soil	VHGLKNRLTWYRLPDPGHHECIYGDDIDDEQDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPVG
Ga0307308_102108142	3300028884	Soil	MKELKKHLTWYRLRDPDRPDNVYGDEIPDEQLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGIPVEPGPTAPIR
Ga0307498_101532952	3300031170	Soil	MKELKKHLTWYRLRDPGRPDNVYGDEIADEQLAFQRAAKLAGFYQRPIEVCKVVGGRLARPVGVPVEPGPTAPIR
Ga0307506_100078103	3300031366	Soil	MKELKKHLTWYRLRDPARPDNVYGDGIADEQLAFQRAAKLAGFYQQPIEVCRVVGGRLARPVGIPVEPGPTAPTG
Ga0318555_107037682	3300031640	Soil	MNVLLRRLTWYRLRDPERHDQVYGDEIDDEWAARRRAARLADFYQRPIEVCEVVGGRLARPIAAPIAPG
Ga0307468_1007401521	3300031740	Hardwood Forest Soil	MHGLKNRLTWYQLRDPGHPERIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGTPVDPGPTAPV
Ga0318546_101987091	3300031771	Soil	MNVLLRRLTWYRLRDPERHDQVYGDEIDDEWAARRRAARLADFYQRPIEVCEVVGGRLARPIAAPIAPGPR
Ga0318552_106651791	3300031782	Soil	EAMNVLLRRLTWYRLRDPERHDQVYGDEIDDEWAARRRAARLADFYQRPIEVCEVVGGRLARPIAAPIAPGPRAPVDR
Ga0318522_102355212	3300031894	Soil	MNVLLRRLTWYRLRDPERHDQVYGDEIDDEWAARRRAARLADFYQRPIEVCEVVGGRLARPIAAPIAPGPRAPVDR
Ga0308175_1007608392	3300031938	Soil	MHRLKNRLTWYRLRDPGQPDCIYGDDIDGQEDAFRRAAKLAGFYQRPVEVCHVIGGRLVRPVGTPVDPGPTAPVG
Ga0308176_111553212	3300031996	Soil	MKELKKHLTWYRLRDPGRPDNVYGDEIADERLAFQRAAKLAGFYQQPIEVCKVVGGRLARPVGMPVEPGPTAPIR
Ga0308173_103116512	3300032074	Soil	MHGLKNRLTWYRLRDPGHPERIYGDDIDDAEDAFRRAAKLAGFYQRPVEVCHVIGGGLVRPVGAPVDPGPTAPVG
Ga0318540_104985742	3300032094	Soil	MNVLLRRLTWYRLRDPERHDQVYGDEIDDEWAARRRAARLADFYQRPIEVCEVVGGRLARPI
Ga0307470_102809201	3300032174	Hardwood Forest Soil	MHGLKNRLTWYRLRDPGHPECIYGDDIDDEEDAFRRAAKLAGFYQRPVEVCYVIGGGLVRPVGTPVDPGPTAPV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054299

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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