Metagenome / Metatranscriptome Family F054192

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054192
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	54 residues
Representative Sequence	ILVTSRPSEDLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Number of Associated Samples	126
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	91.43 %
% of genes from short scaffolds (< 2000 bps)	90.71 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.857 % of family members)
Environment Ontology (ENVO)	Unclassified (37.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 17.86% Coil/Unstructured: 82.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00903	Glyoxalase	2.14
PF07978	NIPSNAP	2.14
PF07238	PilZ	2.14
PF04335	VirB8	1.43
PF00893	Multi_Drug_Res	1.43
PF12681	Glyoxalase_2	1.43
PF00069	Pkinase	1.43
PF00883	Peptidase_M17	1.43
PF00582	Usp	0.71
PF13432	TPR_16	0.71
PF00078	RVT_1	0.71
PF00080	Sod_Cu	0.71
PF13565	HTH_32	0.71
PF13701	DDE_Tnp_1_4	0.71
PF17137	DUF5110	0.71
PF13466	STAS_2	0.71
PF14384	BrnA_antitoxin	0.71
PF13361	UvrD_C	0.71
PF00664	ABC_membrane	0.71
PF10049	DUF2283	0.71
PF04610	TrbL	0.71
PF09365	DUF2461	0.71
PF02452	PemK_toxin	0.71
PF03352	Adenine_glyco	0.71
PF09723	Zn-ribbon_8	0.71
PF13683	rve_3	0.71
PF08240	ADH_N	0.71
PF14667	Polysacc_synt_C	0.71
PF01545	Cation_efflux	0.71
PF01797	Y1_Tnp	0.71
PF00817	IMS	0.71
PF00926	DHBP_synthase	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.71
COG0260	Leucyl aminopeptidase	Amino acid transport and metabolism [E]	1.43
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	1.43
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	1.43
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.71
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	0.71
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.71
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.71
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.71
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	0.71
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.71
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.71
COG3704	Type IV secretory pathway, VirB6 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.71
COG3846	Type IV secretory pathway, TrbL components	Intracellular trafficking, secretion, and vesicular transport [U]	0.71
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.29 %
Unclassified	root	N/A	5.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.43 %
Unclassified	root	N/A	5.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.43 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.29 %
Unclassified	root	N/A	5.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.29 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.29 %
Unclassified	root	N/A	5.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.57 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.71 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.71 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.71 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.71 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.29 %
Unclassified	root	N/A	5.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.71 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.29 %
Unclassified	root	N/A	5.71 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.71 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.71 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.71 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.29 %
Unclassified	root	N/A	5.71 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.71 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	0.71 %
Acidobacterium capsulatum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	0.71 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.71 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02GGPU8	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104887587	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300001661\|JGI12053J15887_10064883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium capsulatum	2025	Open in IMG/M
3300003368\|JGI26340J50214_10194730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300004091\|Ga0062387_101405789	Not Available	556	Open in IMG/M
3300004120\|Ga0058901_1418825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300004479\|Ga0062595_101726318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300004609\|Ga0068958_1346587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005332\|Ga0066388_100048078	All Organisms → cellular organisms → Bacteria	4335	Open in IMG/M
3300005337\|Ga0070682_100842357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300005345\|Ga0070692_10928570	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005355\|Ga0070671_100439297	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005437\|Ga0070710_11166893	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005459\|Ga0068867_100340411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300005534\|Ga0070735_10920859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005536\|Ga0070697_100736560	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300005542\|Ga0070732_10397496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300005545\|Ga0070695_101209047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300005574\|Ga0066694_10407438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005614\|Ga0068856_102346812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300005921\|Ga0070766_10460940	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005995\|Ga0066790_10423914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300006028\|Ga0070717_11100477	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300006059\|Ga0075017_100511528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300006176\|Ga0070765_100979227	Not Available	799	Open in IMG/M
3300006642\|Ga0075521_10022495	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300006795\|Ga0075520_1292954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300009012\|Ga0066710_101785034	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300009088\|Ga0099830_11054789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300009089\|Ga0099828_11726634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300009090\|Ga0099827_11428442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300009143\|Ga0099792_10466263	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300009148\|Ga0105243_10717500	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300009521\|Ga0116222_1025110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	2669	Open in IMG/M
3300009545\|Ga0105237_10436461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300009792\|Ga0126374_11170995	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010046\|Ga0126384_11704607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300010360\|Ga0126372_10264131	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300010366\|Ga0126379_11542937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300010373\|Ga0134128_11906248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300010376\|Ga0126381_104309650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300011269\|Ga0137392_11279025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300011270\|Ga0137391_10589582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300011270\|Ga0137391_11322914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300011271\|Ga0137393_11616517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300011444\|Ga0137463_1042464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1686	Open in IMG/M
3300012096\|Ga0137389_10527545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300012189\|Ga0137388_10345326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1371	Open in IMG/M
3300012189\|Ga0137388_10794798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	877	Open in IMG/M
3300012189\|Ga0137388_11275115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300012202\|Ga0137363_10425429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300012202\|Ga0137363_10522512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300012202\|Ga0137363_10766724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300012203\|Ga0137399_11085207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012205\|Ga0137362_10452247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1112	Open in IMG/M
3300012357\|Ga0137384_10207433	All Organisms → cellular organisms → Bacteria → Acidobacteria	1639	Open in IMG/M
3300012361\|Ga0137360_10184116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1680	Open in IMG/M
3300012362\|Ga0137361_11100667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300012363\|Ga0137390_10899752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300012923\|Ga0137359_11180795	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300012925\|Ga0137419_10798097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300012927\|Ga0137416_10703153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300012930\|Ga0137407_11892163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012930\|Ga0137407_11912227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300012944\|Ga0137410_10865776	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012960\|Ga0164301_10291104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300012987\|Ga0164307_11342681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300013306\|Ga0163162_10671719	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	1159	Open in IMG/M
3300013307\|Ga0157372_10882979	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300014164\|Ga0181532_10616061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300015053\|Ga0137405_1313857	All Organisms → cellular organisms → Bacteria	5390	Open in IMG/M
3300016341\|Ga0182035_10123909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1938	Open in IMG/M
3300016357\|Ga0182032_11127020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300016357\|Ga0182032_11344074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300016422\|Ga0182039_10278233	All Organisms → cellular organisms → Bacteria → Acidobacteria	1376	Open in IMG/M
3300017924\|Ga0187820_1307700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300017947\|Ga0187785_10441295	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300017955\|Ga0187817_10585594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300017974\|Ga0187777_10429395	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300017994\|Ga0187822_10412493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300018001\|Ga0187815_10029541	All Organisms → cellular organisms → Bacteria → Acidobacteria	2325	Open in IMG/M
3300018007\|Ga0187805_10094509	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300018034\|Ga0187863_10132473	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300018034\|Ga0187863_10704366	Not Available	570	Open in IMG/M
3300018035\|Ga0187875_10688511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300018037\|Ga0187883_10075373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1770	Open in IMG/M
3300019789\|Ga0137408_1354543	All Organisms → cellular organisms → Bacteria → Proteobacteria	2458	Open in IMG/M
3300019885\|Ga0193747_1014491	All Organisms → cellular organisms → Bacteria → Acidobacteria	1919	Open in IMG/M
3300020001\|Ga0193731_1020691	All Organisms → cellular organisms → Bacteria → Acidobacteria	1720	Open in IMG/M
3300020015\|Ga0193734_1055419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300020579\|Ga0210407_10206673	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1526	Open in IMG/M
3300020582\|Ga0210395_10228961	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1395	Open in IMG/M
3300020583\|Ga0210401_11185389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300021180\|Ga0210396_11563263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021404\|Ga0210389_11009204	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300021404\|Ga0210389_11099858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021405\|Ga0210387_10280241	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300021407\|Ga0210383_11012292	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300021407\|Ga0210383_11130424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300021474\|Ga0210390_11344965	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300021560\|Ga0126371_10629037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1222	Open in IMG/M
3300022508\|Ga0222728_1099057	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300022524\|Ga0224534_1055382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300022722\|Ga0242657_1117019	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300024288\|Ga0179589_10229922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300024330\|Ga0137417_1158238	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300025878\|Ga0209584_10110915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300025906\|Ga0207699_10244866	All Organisms → cellular organisms → Bacteria → Acidobacteria	1233	Open in IMG/M
3300025931\|Ga0207644_10441561	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300025934\|Ga0207686_10792087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300026041\|Ga0207639_10084297	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300026331\|Ga0209267_1019477	All Organisms → cellular organisms → Bacteria → Acidobacteria	3436	Open in IMG/M
3300026981\|Ga0207822_1034465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	541	Open in IMG/M
3300027591\|Ga0209733_1090959	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	776	Open in IMG/M
3300027635\|Ga0209625_1140521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300027825\|Ga0209039_10128126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300027825\|Ga0209039_10282450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300027889\|Ga0209380_10667490	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300027902\|Ga0209048_10452855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300027915\|Ga0209069_10241484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300028784\|Ga0307282_10493488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300031090\|Ga0265760_10058015	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300031090\|Ga0265760_10303436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300031469\|Ga0170819_10554701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300031708\|Ga0310686_111167888	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031708\|Ga0310686_117320797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1189	Open in IMG/M
3300031740\|Ga0307468_100229537	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M
3300031910\|Ga0306923_11389882	Not Available	740	Open in IMG/M
3300031912\|Ga0306921_10018714	All Organisms → cellular organisms → Bacteria	7561	Open in IMG/M
3300032076\|Ga0306924_10903724	Not Available	976	Open in IMG/M
3300032076\|Ga0306924_12399143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032091\|Ga0318577_10540428	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300032094\|Ga0318540_10283996	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300032180\|Ga0307471_100445482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1433	Open in IMG/M
3300032770\|Ga0335085_10991828	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300032783\|Ga0335079_11829188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300032892\|Ga0335081_11644492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.14%
Host-Associated	Host-Associated	7.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.29%
Aquatic	Environmental → Aquatic	12.86%
Plants	Host-Associated → Plants	7.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.57%
Freshwater	Environmental → Aquatic → Freshwater	10.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Sediment	Environmental → Aquatic → Sediment	2.14%
Peat	Environmental → Terrestrial → Peat	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.14%
Loam	Environmental → Terrestrial → Soil → Loam	12.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.43%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.14%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.14%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.43%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.43%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.43%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004609	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_08182900	2170459005	Grass Soil	LVTSRPSEDLMAVYDGQQVPIGNFLWRVMGRDGLQYGETPLVTQFEKGFESVQQHK
INPhiseqgaiiFebDRAFT_1048875871	3300000364	Soil	DLLAVYDARPWPGGNFLWRVMGRDGLQAGETPLVLQFEKGFESVQRHSN*
JGI12053J15887_100648831	3300001661	Forest Soil	SEDLLAVYDAHQGPTSNFLWRVMEQGGLESGETPLVTQFTKGFESVRKHQ*
JGI26340J50214_101947301	3300003368	Bog Forest Soil	PSDADIIILLTSRPSEDVMAVYDAHPSGNFLWRVMGRNGLQSGETPLVTQFEKGFESVQQHK*
Ga0062387_1014057892	3300004091	Bog Forest Soil	PSEDLMAVYDAGQSGSFLWRVMGRGGLQFGETPLVTQFEQGFESVQKHH*
Ga0058901_14188252	3300004120	Forest Soil	VTSRPSEDLMAVYDAHPWSSGSYLWRVMGRNGLQSGETPLVTQFEKGFESVQQHNAH*
Ga0062595_1017263183	3300004479	Soil	SRPSEDLMAVYDGHQEPIGNFLWRVMGRDGLEYGETPLVTQFEKGFESVQKHK*
Ga0068958_13465871	3300004609	Peatlands Soil	ADIIILVTSRPSEDLLAVYDAHMHGNFLWRVMGRGGLQAGETPLVTQFEKGFESVQHNVR
Ga0066388_1000480781	3300005332	Tropical Forest Soil	MSRPSEDLLAVYDAHQGPNGNFLWRVMQQGGLEPGETPLVTQFEKGFESVQKRR*
Ga0070682_1008423572	3300005337	Corn Rhizosphere	MAVYDGHGGPRGNYLWRVMGRDGLASGETPLVTQFEQGFESVQTHK*
Ga0070692_109285702	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RPSEDLMAVYDGHQEPIGNFLWRVMGRDGLEYGETPLVTQFEKGFESVQKHK*
Ga0070671_1004392971	3300005355	Switchgrass Rhizosphere	DLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0070714_1003428081	3300005435	Agricultural Soil	PSEDVLAVYERGMSGGQYLWRAMGRGGLQTGETPLVTEFEKGFDSVQTKSGK*
Ga0070710_111668932	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DLMAVYDAHQGPSGNYLWRVMGRDGLQSGETPLVTQFEKGFEGVQKHK*
Ga0068867_1003404113	3300005459	Miscanthus Rhizosphere	DVMAVYDGHQGPNGNYLWRVMGRNGLQSGETPLVTQFEKAFDSVQTHK*
Ga0070735_109208591	3300005534	Surface Soil	SQADIIILVTSRPSEDLMAVYDAHMQGNFLWRVMGRNGLQPGETPLVTQFEKGFEGLSQNKTP*
Ga0070697_1007365601	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSSRPSEDLLAVYDAHVWPSGTFLWRVMRRDGLQADETPLVTQFEKGFESVQKRK*
Ga0070732_103974962	3300005542	Surface Soil	DIIILVTSRPSEDLMAVYDAHVHGNFLWRVMGRNGLQPGETPLVTQFEKGFEGLSQHKTP
Ga0070695_1012090471	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IILVTSRPSEDLLAVYDGHGPRGNYLWRVMGRNGLASGETPLVTQFEQGFESVQTHK*
Ga0066694_104074381	3300005574	Soil	TILVTSRPSEDLLAVYDTHQGSGNFLWRVMGRDGLESDETPLVTQFEKGFESVQKHK*
Ga0068857_1007058283	3300005577	Corn Rhizosphere	AVYDGHQEPIGNFLWRVMGRDGLEYGETPLVTQFEKGFESVQKHK*
Ga0068856_1023468121	3300005614	Corn Rhizosphere	LDVYDGHQFPSGNYLWRVTATGGLQAGETPLVTQFEKAFENLPKK*
Ga0070766_104609402	3300005921	Soil	LVTSRPSEDLMAVYDAHMPSTFLWRVMGRDGLQSGETPLVTQFEQGFESVSQHNAR*
Ga0066790_104239143	3300005995	Soil	ADIIILVTSRPSEDVLAVHDAHQGSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0070717_111004771	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TSRPSEDLMAVYDGHQEPIGNFLWRVMGRDGLEYGETPLVTQFEKGFESVQKHK*
Ga0075017_1005115283	3300006059	Watersheds	MAVYDGHQRTGGNYLWRVMGRDGLQSGETLLVTQFEKGFDSVQKHK*
Ga0070765_1009792271	3300006176	Soil	RPPEDVMAVYDMPPSGSFLWHVMAHDGLQSGETPLVTEFEQGFESVQKHN*
Ga0075521_100224951	3300006642	Arctic Peat Soil	YQPSDADIIILATSRPSEDVIAVYDAGPTGSFLWRVMGRNGLQSGETPLVAQFEQGFESVQTHK*
Ga0075520_12929542	3300006795	Arctic Peat Soil	AVYDAPPSGSFLWRVMGRDGLQSGETPLVTEFEQGFESVQRHN*
Ga0066710_1017850342	3300009012	Grasslands Soil	LVTSRPSEDLLAVYDARQAPSGNFLWRVMGRDALQSGETPLVTQFEKGFESVQKHK
Ga0099830_110547892	3300009088	Vadose Zone Soil	RRPSEDVMAVYDAHQGWSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0099828_117266341	3300009089	Vadose Zone Soil	SEADIIILVTSRPSEDLLAVYDAHQGPSGNFLWRVTGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0099827_114284421	3300009090	Vadose Zone Soil	EDVMAVYDGHQGASGNYLWRVMGRDGLASGETPLVTQFEKGFESVQKHK*
Ga0099792_104662632	3300009143	Vadose Zone Soil	VTSRPSEDLLAVYDAHQGPTSNFLWRVMEQGGLQSGETPLVTQFIKGFESVRKHQ*
Ga0105243_107175002	3300009148	Miscanthus Rhizosphere	VTSRPSEDVMAVYDGHGGPKGNYLWRVMGRDGLASGETPLVTQFEQGFESVQTHK*
Ga0116222_10251103	3300009521	Peatlands Soil	PSEDVMAVYDAHEHANFLWRVMQRDGLQSGETPLVTQFEKGFETVSEHSGN*
Ga0105237_104364613	3300009545	Corn Rhizosphere	LVTSRPSEDVMAVYDGHGGPRGNYLWRVMGRDGLASGETPLVTQFEQGFESVQTHK*
Ga0126374_111709951	3300009792	Tropical Forest Soil	SEDLLAVYDARTPSAQYLWRAMGRDGLQVGETPLATEFEKGFEAVHVKPGK*
Ga0126384_117046072	3300010046	Tropical Forest Soil	VTSRPSEDLLAVYDARPWPGGNFLWRVMGRNGLQSGETPLVMEFEKGFESVQRHSK*
Ga0126372_102641311	3300010360	Tropical Forest Soil	LVTSRPSEDLLAVYDAHQSPNGNYLWRVMGRDGLEPGETPLVTQFEKAFENVQQHE*
Ga0126379_115429371	3300010366	Tropical Forest Soil	TSRPSEDLMAVYDAHTGPSGNFLWRVMGREGLQSGETPLVTQFEKGFESVQNHK*
Ga0134128_119062482	3300010373	Terrestrial Soil	YQPYEADIIILVTSRASEDVLAVYDGHQRASGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0126381_1043096501	3300010376	Tropical Forest Soil	LAVYDARPWPAGNFLWRVMGHGGLQSGETPLVTEFEQGFESVQKHN*
Ga0137392_112790251	3300011269	Vadose Zone Soil	ILVTSRPSEDVMAVYDAHGLRGNYLWRVMGRDGLASGETPLVTQFEKGFESVQKHK*
Ga0137391_105895821	3300011270	Vadose Zone Soil	RPSEADIIILVTSRPSEDLMAVYDGHQGTRGNYLWRVMGRDGLASGETPLVTQFEKGFESVQKHK*
Ga0137391_113229141	3300011270	Vadose Zone Soil	SRPSEDLLAVYDAHGSKGNYLWRVMGRDGLQTGETPLVTQFEKGFDSVQTHK*
Ga0137393_116165172	3300011271	Vadose Zone Soil	PSQADIIILVTSRPSEDVMAVYDAHQGSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0137463_10424641	3300011444	Soil	TSRPSEDLMAVYDAHQGPSGNFLWRVMGQGGFQSGETPLVTQFEKGFESVQKHK*
Ga0137389_105275451	3300012096	Vadose Zone Soil	RPSEDVMAVYDGQQGPSGNFLWRIMGRDGVAAGETPLVTQFEKGFDSVQKHK*
Ga0137388_103453261	3300012189	Vadose Zone Soil	SRPSEDLLAVYDGHQGASGNYLWRVMGRDGLASGETALVTQFEKGFDSVQKHK*
Ga0137388_107947982	3300012189	Vadose Zone Soil	LVTSRPSEDVMAVYDGHQGTGGNYLWRVMGRDGLASGETPLVTQFEKGFESVEKHK*
Ga0137388_112751152	3300012189	Vadose Zone Soil	RPSEDVLAVYDAHQGASGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQRHK*
Ga0137363_104254292	3300012202	Vadose Zone Soil	MAVYDAHQSSDNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0137363_105225122	3300012202	Vadose Zone Soil	MAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0137363_107667241	3300012202	Vadose Zone Soil	ILVTSRPSEDLLAVYDAHVWPSGTFLWRVMRRDGLQADETPLVTQFEKGFESVQKHK*
Ga0137399_110852073	3300012203	Vadose Zone Soil	ADIIILVTSRPTEDLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0137362_104522472	3300012205	Vadose Zone Soil	MAVYDGHQGPNGNYLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK*
Ga0137384_102074331	3300012357	Vadose Zone Soil	DVMAVYDGHQGTGGNYLWRVMGRDGLASGETPLVTQFEKGFDSVQKHK*
Ga0137360_101841161	3300012361	Vadose Zone Soil	IIILVTSRPSEDVMAVYDGHQGTRGNFLWRVMGRDGLASGETPLVTQFEKGFESVQKHK*
Ga0137361_111006671	3300012362	Vadose Zone Soil	RPSEDVMAVYDAHPWPSGNVLWRVMGRDGLQSGETPLVTQFEKGFESVQKHNYNSSPISKP*
Ga0137390_108997522	3300012363	Vadose Zone Soil	VTSRPSEDLMAVYDAHNWPSGNFLWRVMGRDGLQAGETPLVTQFEKGFESVQQHK*
Ga0137398_105826731	3300012683	Vadose Zone Soil	VYDGHRGPNGNYLWRVMGREGLESGETPLVTQFEKGFDSVQKHK*
Ga0137359_111807951	3300012923	Vadose Zone Soil	SEADIIILVTSRPSEDLLAVYDAHQGPTSNFLWRVMEQGGLQSGETPLVTQFIKGFESVRKHQ*
Ga0137419_107980972	3300012925	Vadose Zone Soil	VTSRPSEDVMAVYDGHGSRGNYLWRVMGRDGLASGETPLVTQFEKGFESVQKHK*
Ga0137416_107031531	3300012927	Vadose Zone Soil	PSEDLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKRK*
Ga0137407_118921631	3300012930	Vadose Zone Soil	PSEDLMAVYDGHGSRGNYLWRVMGRDGLASGETPLVTQFEKGFDSVQKHK*
Ga0137407_119122271	3300012930	Vadose Zone Soil	SEADIIILVTSRPSEDLMAVYDGHGSRGNYLWRVMGRDGLASGETPLVTQFEKGFDSVQKHK*
Ga0137410_108657761	3300012944	Vadose Zone Soil	HHLVTSRPSEDLLAVYDAHQGPTGNFLWRVMGQGGLQSGETPLVTQFTKGFERLQKHK*
Ga0164301_102911041	3300012960	Soil	DVMAVYDWHGPRGNVLWRVMGRDGLASGETPLVTQFEKGFDSVQTHK*
Ga0164307_113426811	3300012987	Soil	RPSEDVLAVYDAHGLRGNYLWRVMGRGGLDSGETPLVTQFEKGFDSVQKHK*
Ga0163162_106717191	3300013306	Switchgrass Rhizosphere	RPSEADIIILVTSRPSEDVMAVYDGHGGPRGNYLWRVMGRNGLQSGETPLVTQFEKAFDSVQTHK*
Ga0157372_108829791	3300013307	Corn Rhizosphere	LVTSRPSEDLLAVYDGHQEPIGNFLWRVMGRDGLEYGETPLVTQFEKGFESVQKHK*
Ga0181532_106160611	3300014164	Bog	ILVTSRPSEDVMAVYDAHTPSSFLWRVMGRDGLQSGETPLVTQFEKGFEGVQRNVN*
Ga0137405_13138574	3300015053	Vadose Zone Soil	MAVYDGHQETDRQFSLARHGRDGLQYGETPLVTQFEKGFESVQQHK*
Ga0182035_101239091	3300016341	Soil	DIIILVTSRPSEDLLAVYDGHRPSGNFLWRVMGRDGLLSGETPLVTQFEKGFESVQKHK
Ga0182032_111270201	3300016357	Soil	EADIIVLVMSRPSEDVMAVYDARPWPSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKEK
Ga0182032_113440741	3300016357	Soil	LPSEGLLAVYDSRPWPSGNFLWRVMGRDGLQAGETPLVTQFEKGFESVQKHR
Ga0182039_102782331	3300016422	Soil	DLLAVYDARPWPSGSFLWRVMGRDGLQALETPLVTQFEKGFESVQQHR
Ga0187820_13077002	3300017924	Freshwater Sediment	IVILVTSRPSEDLMAVYDAHVWPRGNFLWRVMERDGLQSGETPLVTQFEKGFESVQEHR
Ga0187785_104412952	3300017947	Tropical Peatland	SEDVLAVYDAHGWPGNNYLWRVMGQAGLQRGETPLVTQFEKGFEGVQKTK
Ga0187817_105855941	3300017955	Freshwater Sediment	LVTSRPSEDLMAVYDAGPTSNFLWRVMGRGGLQSGETPLVTQFEKGFESVQKHK
Ga0187777_104293951	3300017974	Tropical Peatland	SRPSEDLLAVYDARMFPSGLYLWRVMGRSGLQSGETPLVTQFEKGFEGVQKKK
Ga0187822_104124931	3300017994	Freshwater Sediment	ADIIILVTSRPSEDLVAVYDAHLWPRGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKH
Ga0187815_100295413	3300018001	Freshwater Sediment	EDLVAVYDAHLWPRGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKNK
Ga0187805_100945091	3300018007	Freshwater Sediment	ILVTSRPSEDLMAVYDAHVWPRGNFLWRVMERDGLQSGETPLVTQFEKGFESVQEHR
Ga0187863_101324731	3300018034	Peatland	EDVMAVYDAHTPSSFLWRVMGRDGLQSGETPLVTQFEKGFESVQRNVN
Ga0187863_107043662	3300018034	Peatland	EDVMAVYDAHTPSSFLWRVMGRDGLQSGETPLVTQFEKGFEGVQRNVN
Ga0187875_106885112	3300018035	Peatland	RPSEDVMAVYDAHPPSSFLWRVMGRDGLQSGETPPVTQFEKGFEGVQRNVN
Ga0187883_100753733	3300018037	Peatland	SEDVMAVYDAHTPSSFLWRVMGRDGLQSGETPLVTQFEKGFESVQRNVN
Ga0137408_13545431	3300019789	Vadose Zone Soil	PSQADISILVTSRPSEDVMAVYDGHRGPNGNYLWRVMGRDGLESGETPLVTQFEKGFDSVQKHK
Ga0193747_10144911	3300019885	Soil	DLMAVYDAHHSSGTFLWRVMGRDGLQYGETPLVTQFEKGFESVQKHK
Ga0193731_10206912	3300020001	Soil	ILVTSRPSEDLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0193734_10554191	3300020015	Soil	MRAMSIIILVTSRPSEDLMAVYDAHHSSGNFLWRVMGRDGLQYGETPLVTQFEKGFESVQKHK
Ga0210407_102066735	3300020579	Soil	PSEDLLAVYDAHEGPGGNFLWRVMGRAGLQSGETPLVTQFEKGFESVQKHK
Ga0210395_102289611	3300020582	Soil	IRVTSRPSEDLLAVYDAHEHSSFLWRVMGRDGLQSGETPLVTQFEKGFEGVQHNAR
Ga0210401_111853891	3300020583	Soil	TSRPSEDLMAVYDAHQPSTFLWRVMGRDGLQSGETPLVTQFEKAFEGVQHNGN
Ga0210396_115632631	3300021180	Soil	LVTSRPSEDVMAVYDMPPSSSFLWRVMGHGGLQSGETPLVTEFEQGFESVQKHN
Ga0210389_110092041	3300021404	Soil	EDVMAVYDMPPSSSFLWRVMGHGGLQSGETPLVTEFEQGFESVQKHN
Ga0210389_110998581	3300021404	Soil	DIMILVTSRPSEDVMAVYDMPPGGIFLWRVMAHGGLQTGETPLVTQFEQRFESTQKHN
Ga0210387_102802413	3300021405	Soil	ILVTSRPSEDLMAVYDAHQPSTFLWRVMGRDGLQSGETPLVTQFEKAFEGVQHNGN
Ga0210383_110122922	3300021407	Soil	EDVMAVYDMPPNGSFLWRVMGHSGLQSGETPLVTEFEQGFESVQKHN
Ga0210383_111304241	3300021407	Soil	YQPSQADIFILVTSRPSEDLMAVYDAHQPSSFLWRVMGRDGLQSGETPLVTQFEKGFESVQRNGN
Ga0210390_113449652	3300021474	Soil	ADIVILVTSRPSEDVLAVYDGHGWPSGTFLWRVMGPSGLQSGETPLVTQFEKGFESVQKH
Ga0126371_106290373	3300021560	Tropical Forest Soil	VILVTSRPSEDVMAVYDGHQWPRGNYLWRVMGRGGLQSGETPLVTQFEKGFESVQKTGTQ
Ga0222728_10990572	3300022508	Soil	AVYDVPMRGNFLWRVMGRGGLQASEAPLVAQFEKGFESISQDNGR
Ga0224534_10553822	3300022524	Soil	SQADIIILVTSRPSEDLMAVYEAPTSGSFLWRVMGRGGLQSGETPLVTEFEQGFESVQRH
Ga0242657_11170191	3300022722	Soil	SRPSEDVMAVYDMPPSGISLWRVMAHGGLQSGETPLVTEFEQGFESVQKHD
Ga0179589_102299221	3300024288	Vadose Zone Soil	DIIIRVLSRPSEDVMAVYDGHQGTGGNYLWRVMGRDGLASGETPLVTQFEKGFEGVQKHK
Ga0137417_11582381	3300024330	Vadose Zone Soil	PALRRRHYHPILVTSRPSEDLLAVYDAWPSGSYLWRVMGRNGLQSGETPLVTQFEKGFESVQKHE
Ga0209584_101109152	3300025878	Arctic Peat Soil	YQPSDADIIILATSRPSEDVIAVYDAGPTGSFLWRVMGRNGLQSGETPLVAQFEQGFESVQTHK
Ga0207699_102448662	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	EDLLAVYDARQAPSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0207644_104415613	3300025931	Switchgrass Rhizosphere	DLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0207686_107920871	3300025934	Miscanthus Rhizosphere	ADVIILVTSRPSEDLMAVYDAHQEPIGNFLWRVMGRDGLQYGETPLVTQFEKGFESVQKH
Ga0207639_100842975	3300026041	Corn Rhizosphere	LVTSRPSEDLMAVYDGHQEPIGNFLWRVMGRNGLEYGETPLVTQFEKGFESVQKHK
Ga0209267_10194773	3300026331	Soil	IIILVTSHPSEDLMAVYDAHHSSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0207822_10344651	3300026981	Tropical Forest Soil	SEDLLAVYDAYQWPSGNFLWRVMGRDGLQTGETPLVTQFEKGFEGVQKHK
Ga0209733_10909591	3300027591	Forest Soil	LAVYDAHLWPSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKQNAR
Ga0209625_11405212	3300027635	Forest Soil	MAVYDGHQEPIGNFLWRVMGRDGLEYGETPLVTQFEKGFESVQKHK
Ga0209039_101281261	3300027825	Bog Forest Soil	DIIILVTSRPSEDVMAVYDAGLRGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQNHK
Ga0209039_102824501	3300027825	Bog Forest Soil	RPSEADIIILVMSRPSEDVMAVYDSWPSTNFLWRVMGRGGLQSGETPLVTQFEKGFESVQKHK
Ga0209380_106674902	3300027889	Soil	ILLVQSRPTEDLLAVYDAHFAGGQYLWRVMGRDGLQKGETPLLTKFEKGFESIQPAASKT
Ga0209048_104528552	3300027902	Freshwater Lake Sediment	SEDVLAVYDASFWPSGNFLWRVMGRNGLQSGETPLVTQFEKGFESVQKHQ
Ga0209069_102414842	3300027915	Watersheds	AVYDGHQGTGGNYLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0307282_104934881	3300028784	Soil	TSRPSEDVMAVYDGHQGPNGNYLWRVMGRDGLVSGEAPLVTEFEKGFESVQKHK
Ga0265760_100580152	3300031090	Soil	FILVTSRPSEELMAVYDAHHPSSFLWRVMGHDGLQSGETPLVTQFEKGFESVQRNGN
Ga0265760_103034362	3300031090	Soil	VTSRPSEDVMAVYDMPPSGSFLWRVMSHSGLQSGETPLVTEFEQGFESVQKHN
Ga0170819_105547012	3300031469	Forest Soil	DADIIVLVQSRPSEDVMAVYDAHMSGGQYLWRTMGRDGLQTGETPMATQFEKGFESVQTK
Ga0310686_1111678882	3300031708	Soil	SEDLLAVYDARTHGNFLWRVMGRDGLQAGETPLVTQFEKGFESVSQRNVR
Ga0310686_1173207972	3300031708	Soil	RPSEDLMAVYDAHQPSSFLWRVMGRDGLQSGETPLVTQFEKGFESVQRNGN
Ga0307468_1002295372	3300031740	Hardwood Forest Soil	DVMAVYDGHGLRGNYLWRVMGRDGLASGETPLVTQFEKAFDSVQKHK
Ga0306923_113898822	3300031910	Soil	ADIIILVTSRPSEDLLAVYDARPWPAGNFLWRVMGRNGLQSGETPLVTQFEKGFESVQSH
Ga0306921_100187141	3300031912	Soil	SRPSEDLLAVYDARPWPAGNFLWRVMGRNGLQAGETPLVTQFEKGFESVQSHK
Ga0306924_109037242	3300032076	Soil	SEDLLAVYDARPWPSGNFLWRVMGRDGLQAGETPLVTQFEKGFESVQKHPK
Ga0306924_123991431	3300032076	Soil	LAVYDARPSPAGNFLWRVMGRNGLQSGETRLVTQFEKGFESVQSHK
Ga0318577_105404281	3300032091	Soil	AADLLALYDARPWPSGNCFWRVTRRDGLQADETRLVTQFEKGILDVQRHR
Ga0318540_102839962	3300032094	Soil	EADIIILVTSRPSEDLLAVYDAYQWPSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0307471_1004454821	3300032180	Hardwood Forest Soil	SRPSEDLMAVYDAHQSSGNFLWRVMGRDGLQSGETPLATQFEKGFESVQKHK
Ga0335085_109918282	3300032770	Soil	SEDVMAVYDAYPSGNFLWRVMGRDGLQSGETPLVTQFEKGFESVQKHK
Ga0335079_118291881	3300032783	Soil	LVSSRPTEDVLAVYDAHRPGGNFLWRAMAYKGLQAGETPLATEFETAFESVQHR
Ga0335081_116444921	3300032892	Soil	LVSSRPTEDVLAVYDAHRPGGNFLWRAMAYKGLQAGETPLATQFETAFESVQHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054192

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences