Metagenome / Metatranscriptome Family F054123

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054123
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	109 residues
Representative Sequence	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPAAAGDNTPNTINN
Number of Associated Samples	101
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.29 %
% of genes near scaffold ends (potentially truncated)	22.86 %
% of genes from short scaffolds (< 2000 bps)	65.00 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.143 % of family members)
Environment Ontology (ENVO)	Unclassified (42.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.56% β-sheet: 19.12% Coil/Unstructured: 71.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00072	Response_reg	17.39
PF00158	Sigma54_activat	11.59
PF01618	MotA_ExbB	6.52
PF02954	HTH_8	4.35
PF00581	Rhodanese	2.17
PF07715	Plug	2.17
PF00583	Acetyltransf_1	1.45
PF02472	ExbD	1.45
PF04945	YHS	1.45
PF01479	S4	1.45
PF02774	Semialdhyde_dhC	1.45
PF03734	YkuD	1.45
PF00106	adh_short	0.72
PF00364	Biotin_lipoyl	0.72
PF07484	Collar	0.72
PF13637	Ank_4	0.72
PF13432	TPR_16	0.72
PF01979	Amidohydro_1	0.72
PF03437	BtpA	0.72
PF01954	AF2212-like	0.72
PF15919	HicB_lk_antitox	0.72
PF01416	PseudoU_synth_1	0.72
PF12770	CHAT	0.72
PF00266	Aminotran_5	0.72
PF00378	ECH_1	0.72
PF06971	Put_DNA-bind_N	0.72
PF01148	CTP_transf_1	0.72
PF13147	Obsolete Pfam Family	0.72
PF04116	FA_hydroxylase	0.72
PF01584	CheW	0.72
PF01039	Carboxyl_trans	0.72
PF12833	HTH_18	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	1.45
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	1.45
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	1.45
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.45
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.45
COG0101	tRNA U38,U39,U40 pseudouridine synthase TruA	Translation, ribosomal structure and biogenesis [J]	0.72
COG0434	Membrane biogenesis protein, BtpA/SgcQ family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.72
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.72
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.72
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	34.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.14 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	32.86 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.86 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.71 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.71 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.86 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	32.86 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.71 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_144766_len_27802_cov_17_254585	All Organisms → cellular organisms → Bacteria	27852	Open in IMG/M
2088090008\|P3_DRAFT_NODE_7150_len_8492_cov_16_529087	All Organisms → cellular organisms → Bacteria	8542	Open in IMG/M
3300000896\|JGI11815J12869_101150	Not Available	500	Open in IMG/M
3300002568\|C688J35102_120827173	Not Available	1714	Open in IMG/M
3300004479\|Ga0062595_100214296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300005167\|Ga0066672_10098065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1783	Open in IMG/M
3300005179\|Ga0066684_10303315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300005327\|Ga0070658_10054684	All Organisms → cellular organisms → Bacteria	3241	Open in IMG/M
3300005329\|Ga0070683_100000156	All Organisms → cellular organisms → Bacteria	44469	Open in IMG/M
3300005329\|Ga0070683_100459371	Not Available	1215	Open in IMG/M
3300005331\|Ga0070670_100000166	All Organisms → cellular organisms → Bacteria	59815	Open in IMG/M
3300005331\|Ga0070670_100460607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300005334\|Ga0068869_100048011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3085	Open in IMG/M
3300005337\|Ga0070682_100187959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1448	Open in IMG/M
3300005337\|Ga0070682_100775549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300005345\|Ga0070692_11377976	Not Available	508	Open in IMG/M
3300005438\|Ga0070701_11132019	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300005450\|Ga0066682_10387261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300005458\|Ga0070681_10199540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1919	Open in IMG/M
3300005466\|Ga0070685_10478721	Not Available	877	Open in IMG/M
3300005535\|Ga0070684_100414012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300005539\|Ga0068853_100482700	Not Available	1168	Open in IMG/M
3300005554\|Ga0066661_10554895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300005560\|Ga0066670_10548312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300005561\|Ga0066699_10669917	Not Available	742	Open in IMG/M
3300005575\|Ga0066702_10142946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1410	Open in IMG/M
3300005575\|Ga0066702_10241828	Not Available	1100	Open in IMG/M
3300005578\|Ga0068854_100015404	All Organisms → cellular organisms → Bacteria	5064	Open in IMG/M
3300005578\|Ga0068854_100397984	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005587\|Ga0066654_10408521	Not Available	741	Open in IMG/M
3300006028\|Ga0070717_11953067	Not Available	529	Open in IMG/M
3300006032\|Ga0066696_10145747	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300006237\|Ga0097621_100268427	Not Available	1499	Open in IMG/M
3300006237\|Ga0097621_101113042	Not Available	742	Open in IMG/M
3300006237\|Ga0097621_101830170	Not Available	579	Open in IMG/M
3300006358\|Ga0068871_100987592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300006624\|Ga0101567_10674584	Not Available	573	Open in IMG/M
3300006642\|Ga0075521_10249334	Not Available	849	Open in IMG/M
3300006642\|Ga0075521_10596217	Not Available	544	Open in IMG/M
3300009029\|Ga0066793_10313327	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	906	Open in IMG/M
3300009098\|Ga0105245_10000003	All Organisms → cellular organisms → Bacteria	488207	Open in IMG/M
3300009098\|Ga0105245_12075672	Not Available	622	Open in IMG/M
3300009098\|Ga0105245_12397304	Not Available	581	Open in IMG/M
3300009177\|Ga0105248_12788443	Not Available	557	Open in IMG/M
3300010401\|Ga0134121_10122933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2193	Open in IMG/M
3300011269\|Ga0137392_10086179	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300011269\|Ga0137392_10676345	Not Available	855	Open in IMG/M
3300011269\|Ga0137392_11480418	Not Available	538	Open in IMG/M
3300011271\|Ga0137393_11244413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300012208\|Ga0137376_10337740	Not Available	1308	Open in IMG/M
3300012924\|Ga0137413_11323899	Not Available	579	Open in IMG/M
3300012925\|Ga0137419_10609356	Not Available	878	Open in IMG/M
3300012929\|Ga0137404_10223266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1606	Open in IMG/M
3300012929\|Ga0137404_10239572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1553	Open in IMG/M
3300012944\|Ga0137410_11270724	Not Available	636	Open in IMG/M
3300012944\|Ga0137410_11663892	Not Available	560	Open in IMG/M
3300012958\|Ga0164299_11442089	Not Available	534	Open in IMG/M
3300013105\|Ga0157369_10000123	All Organisms → cellular organisms → Bacteria	110823	Open in IMG/M
3300013296\|Ga0157374_10000005	All Organisms → cellular organisms → Bacteria	646767	Open in IMG/M
3300013296\|Ga0157374_10000019	All Organisms → cellular organisms → Bacteria	280543	Open in IMG/M
3300013296\|Ga0157374_11230853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300013297\|Ga0157378_10007649	All Organisms → cellular organisms → Bacteria	9431	Open in IMG/M
3300013297\|Ga0157378_10227436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1776	Open in IMG/M
3300013308\|Ga0157375_10000031	All Organisms → cellular organisms → Bacteria	195209	Open in IMG/M
3300013308\|Ga0157375_10000638	All Organisms → cellular organisms → Bacteria	31092	Open in IMG/M
3300013308\|Ga0157375_10336745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1674	Open in IMG/M
3300014325\|Ga0163163_12682128	Not Available	555	Open in IMG/M
3300014969\|Ga0157376_10000021	All Organisms → cellular organisms → Bacteria	240083	Open in IMG/M
3300015068\|Ga0167645_108974	Not Available	1048	Open in IMG/M
3300015158\|Ga0167622_1000987	All Organisms → cellular organisms → Bacteria	12102	Open in IMG/M
3300015162\|Ga0167653_1005525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2724	Open in IMG/M
3300015167\|Ga0167661_1011257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1593	Open in IMG/M
3300015168\|Ga0167631_1061720	Not Available	615	Open in IMG/M
3300015171\|Ga0167648_1004397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3608	Open in IMG/M
3300015199\|Ga0167647_1045265	Not Available	1238	Open in IMG/M
3300015241\|Ga0137418_10342515	All Organisms → cellular organisms → Bacteria → Acidobacteria	1236	Open in IMG/M
3300015264\|Ga0137403_10448814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300017993\|Ga0187823_10162282	Not Available	712	Open in IMG/M
3300018431\|Ga0066655_10078808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1788	Open in IMG/M
3300018468\|Ga0066662_12068309	Not Available	597	Open in IMG/M
3300018468\|Ga0066662_12195636	Not Available	579	Open in IMG/M
3300019999\|Ga0193718_1071818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300020581\|Ga0210399_10143476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1972	Open in IMG/M
3300020581\|Ga0210399_10344561	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300021358\|Ga0213873_10003318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2885	Open in IMG/M
3300021362\|Ga0213882_10025792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2253	Open in IMG/M
3300021420\|Ga0210394_10000094	All Organisms → cellular organisms → Bacteria	217133	Open in IMG/M
3300021420\|Ga0210394_10000094	All Organisms → cellular organisms → Bacteria	217133	Open in IMG/M
3300021478\|Ga0210402_10000006	All Organisms → cellular organisms → Bacteria	173990	Open in IMG/M
3300021478\|Ga0210402_10007754	All Organisms → cellular organisms → Bacteria	9393	Open in IMG/M
3300022530\|Ga0242658_1036554	Not Available	978	Open in IMG/M
3300023021\|Ga0233354_103499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1058	Open in IMG/M
3300023046\|Ga0233356_1000039	All Organisms → cellular organisms → Bacteria	48976	Open in IMG/M
3300023046\|Ga0233356_1000039	All Organisms → cellular organisms → Bacteria	48976	Open in IMG/M
3300024178\|Ga0247694_1000985	All Organisms → cellular organisms → Bacteria	5297	Open in IMG/M
3300024182\|Ga0247669_1020660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300024224\|Ga0247673_1011328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300024232\|Ga0247664_1105848	Not Available	653	Open in IMG/M
3300024245\|Ga0247677_1005550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1702	Open in IMG/M
3300024245\|Ga0247677_1006310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1617	Open in IMG/M
3300024245\|Ga0247677_1016057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300024246\|Ga0247680_1000751	All Organisms → cellular organisms → Bacteria	7738	Open in IMG/M
3300024251\|Ga0247679_1003621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2697	Open in IMG/M
3300024251\|Ga0247679_1004661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2381	Open in IMG/M
3300024323\|Ga0247666_1011221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1965	Open in IMG/M
3300024323\|Ga0247666_1054338	Not Available	808	Open in IMG/M
3300025878\|Ga0209584_10158221	Not Available	855	Open in IMG/M
3300025909\|Ga0207705_10514556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300025911\|Ga0207654_11263310	Not Available	538	Open in IMG/M
3300025924\|Ga0207694_10000001	All Organisms → cellular organisms → Bacteria	4078485	Open in IMG/M
3300025925\|Ga0207650_10000989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	21368	Open in IMG/M
3300025925\|Ga0207650_10052895	All Organisms → cellular organisms → Bacteria	3009	Open in IMG/M
3300025927\|Ga0207687_10000002	All Organisms → cellular organisms → Bacteria	975489	Open in IMG/M
3300025942\|Ga0207689_10006699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10162	Open in IMG/M
3300025944\|Ga0207661_10000013	All Organisms → cellular organisms → Bacteria	348811	Open in IMG/M
3300025944\|Ga0207661_10423006	Not Available	1210	Open in IMG/M
3300025945\|Ga0207679_11399208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300025981\|Ga0207640_10022123	All Organisms → cellular organisms → Bacteria	3800	Open in IMG/M
3300025981\|Ga0207640_10668026	Not Available	887	Open in IMG/M
3300026023\|Ga0207677_10000065	All Organisms → cellular organisms → Bacteria	88193	Open in IMG/M
3300026041\|Ga0207639_10060852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2914	Open in IMG/M
3300026317\|Ga0209154_1248545	Not Available	619	Open in IMG/M
3300026320\|Ga0209131_1068345	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1949	Open in IMG/M
3300026527\|Ga0209059_1076332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1428	Open in IMG/M
3300026550\|Ga0209474_10154590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1491	Open in IMG/M
3300027164\|Ga0208994_1010202	Not Available	1225	Open in IMG/M
3300027164\|Ga0208994_1012954	Not Available	1123	Open in IMG/M
3300027164\|Ga0208994_1022827	Not Available	894	Open in IMG/M
3300028145\|Ga0247663_1017563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300030521\|Ga0307511_10002351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	19773	Open in IMG/M
3300030521\|Ga0307511_10008711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10142	Open in IMG/M
3300031720\|Ga0307469_11557181	Not Available	634	Open in IMG/M
3300031754\|Ga0307475_11172050	Not Available	599	Open in IMG/M
3300032174\|Ga0307470_10000005	All Organisms → cellular organisms → Bacteria	164640	Open in IMG/M
3300032174\|Ga0307470_10000040	All Organisms → cellular organisms → Bacteria	92634	Open in IMG/M
3300032174\|Ga0307470_10000050	All Organisms → cellular organisms → Bacteria	85618	Open in IMG/M
3300032174\|Ga0307470_10003490	All Organisms → cellular organisms → Bacteria	6019	Open in IMG/M
3300032180\|Ga0307471_100023254	All Organisms → cellular organisms → Bacteria	4599	Open in IMG/M
3300032180\|Ga0307471_101086130	Not Available	966	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.71%
Host-Associated	Host-Associated	29.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.00%
Plants	Host-Associated → Plants	29.29%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.43%
Roots	Host-Associated → Plants → Roots	5.00%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.86%
Loam	Environmental → Terrestrial → Soil → Loam	12.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.00%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.57%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.57%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.71%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	5.00%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.14%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.43%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300000896	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006624	Soil microbial communities from the Leymus chinensis steppe, China - after adding 1.75 g N m- 2, yr-1	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015158	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1A, Ice margin)	Environmental	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015167	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11b, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023021	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-Q76	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300030521	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01123940	2088090008	Soil	MNILHAITLAALLHQSPAAVPVCQTGTISYKFIGTPGATFTYSGARYSIPASGWIEILSSEKVYLAANGRALPLDVWPIDAFGTRTVPLQAVTDSGPTTSIATLKSFN
P3_DRAFT_00556580	2088090008	Soil	MVPALEYVQAMNILHAITLAALLHHSPVAAPVCHSGTVSYKFVGTPGAMFTYAGERYSIPARGSIELLTSEKVYLAANGRTLPLDVWPIDAFGTRTVPVQATSDSPEQTAPVNPLNTINN
JGI11815J12869_1011501	3300000896	Forest Soil	MNILHAITLAALLHGSPAPVVTCHTGTVSYKFVGAPGATFAYGGTKYSVPASGWIELLSERDGKGYLAANGKTLPLDVWPIDAFGTRTVPLQPTPSISGGGDAISTINN*
C688J35102_1208271731	3300002568	Soil	MNILHAITLAALLHHGPVAPTVTCHTGTVSYKFVGTPGATFTYAGAKYAVPPSGWIELLGDGGKVYLAANGRTLPLDVWPIDAFGTRTVPVQPPATSTDNSTPNTINN*
Ga0062595_1002142963	3300004479	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPTTQNDSSPIGTINN*
Ga0066672_100980652	3300005167	Soil	MNILHAITLAALLHHAPTAPTVTCHTGTVSYRFVGTPGATFSYAGARYSVPGSGWIELLSDGGNKAYLAANGRTLPLDVWPIDAFGTRTVPVQPAAASSDNIIPNTINN*
Ga0066684_103033152	3300005179	Soil	MNILHAITLAALLHHAPAAPKVTCHTGTVSYRFVGTPGATFTYAGASYSVPASGWIELLSDEKVYLAANGRTLPLDVWPIDAFGTRTVP
Ga0070658_100546842	3300005327	Corn Rhizosphere	VVPALDYVPAMNILHAITLAAILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRSLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTINN*
Ga0070683_10000015643	3300005329	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSLPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPATAGDNTPNTINN*
Ga0070683_1004593712	3300005329	Corn Rhizosphere	MNILHAITLAALLHRAPAAPAVTCHSGTVSYRFVGTPGSTFTYGGTRYSVPRSGSIELLSEGKVYLAANGRTLPLDVWPIDGFGTRAVPLQTTESAPPASDSAPISTINN*
Ga0070670_10000016613	3300005331	Switchgrass Rhizosphere	MNILHAITLAALLHHSPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPTAAGDNTPNTINN*
Ga0070670_1004606071	3300005331	Switchgrass Rhizosphere	MNILHAITLAALLHRAPAAPAVTCHSGTVSYRFMGTPGSTFTYGGTQYSVPRSGSIELLSEGGNKVYLAANGRTLPLDVWPIDAFGTRAVPLQT
Ga0068869_1000480112	3300005334	Miscanthus Rhizosphere	MNILHAITLAALLHGSPASPAVTCHKGTISYKFVGSPGSTFTYAGAKYSVPNSGWIELLSESTDKGYLAASGRTLPLDVWPIDAFGTRTVPLQETSLPQTHSDTEPIRTINN*
Ga0070682_1001879592	3300005337	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPAAAGDNTPNTINN*
Ga0070682_1007755491	3300005337	Corn Rhizosphere	MVPALDYVPAMNILHAITLAALLHGSPASPAVTCHKGTVSYKFVGTPGSTFTYAGAKYSVPRSGWVELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQETAAPQTHIDTEPIRTINN*
Ga0070692_113779761	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGAPGATFTYAGAKYSIPPSGWIELIDGGKVYLAASGRTLPLDVWPIDAFGTRTVPVQQAETATDNSTPSTINN*
Ga0070701_111320192	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPQSGWIELLADGGKVYLAANGRSLP
Ga0066682_103872612	3300005450	Soil	MNILHAITLAALLHRSPAAPVPVCHTGTVSYRFTGAPGSTFTYGGTQYSVPRSGSIELLSEGADKAYLAANGRTLPLDVWPIDAFGTRTVPLQTTQSAPAASD
Ga0070681_101995404	3300005458	Corn Rhizosphere	VVPALEYVPAMNILHAITLAALLHGSPASPAVTCHKGTISYKFVGSPGSTFTYAGAKYSVPNSGWIELLSESTDKGYLAASGRTLPLDVWPIDAFGTRTVPLQETSLPQTHSDTEPIRTINN*
Ga0070685_104787212	3300005466	Switchgrass Rhizosphere	MNILHAITLAALLHHAPAAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPQSGWIELLADGGKVYLAANGRSLPLEVWPIDAFGTRTVPVQAPSTANDNITPNTINN*
Ga0070684_1004140122	3300005535	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGEKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQTPATAGDNIPNTINN*
Ga0068853_1004827001	3300005539	Corn Rhizosphere	VVPALDYVPAMNILHAITLAAILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTINN*
Ga0066661_105548951	3300005554	Soil	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGAPGATFTYAGAKYSVPQSGWIELIGDGGKVYLAANGRTLPLDVWPIDAFGTRTVPVQPPATASD
Ga0066670_105483122	3300005560	Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYRFVGTPGATFSYAGARYSVPGSGWIELLSDGGNKAYLAANGRTLPLDVWPID
Ga0066699_106699171	3300005561	Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYRFVGTPGATFSYAGARYSVPPSGWIELLSDGGNKAYLAANGRTLPLDVWPIDAFGTRTVPVQPAAASSDNIIPNTINN*
Ga0066702_101429462	3300005575	Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYRFVGTPGATFTYAGARYSVPQSGWIELLGEGGKVYLAANGRTLPLDVWPIDVFGTRTVPVQPAATTSDNSTPNTINN*
Ga0066702_102418281	3300005575	Soil	MNILHAITLAALLHHAPVAPKVTCHTGTVSYRFVGTPGATFSYAGAKYSVPSSGWIELLSDRSDTAYLAANGRTLPLEVWPIDAFGTRTVPVQPPATATDSTTPNTINN*
Ga0068854_1000154047	3300005578	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPPTAGDNTPNTINN*
Ga0068854_1003979841	3300005578	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYRFTGTPGSTFTYGGTRYAVPSSGSIELLSEGAGKEYLAANGRTLPLDVWPIDAFGTRTVPLQTTQSAPAAAGDSAPIS
Ga0066654_104085212	3300005587	Soil	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGATYAIPRSGWIELLGDGGKVYLAANGRTLPLDVWPMDAFGTRTVPVQPPAAPATDNTTPNTINN*
Ga0070717_119530672	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HAITLAALLHHAPAAPVVTCHTGTVSYRFNGTPGAIFAYAGTNYSVPAAGWIEILADDKTDKTYLAANGRKLPLDVWPIDAFGTRHVPLEATPPSAGSGTDSSR*
Ga0066696_101457474	3300006032	Soil	MNILHAITLAALLHHAPAAPKVTCHTGTVSYRFVGTPGATFTYAGASYSVPASGWIELLSDDKVYLAANGRTLPLDVWPIDAFGTRTVPVQPPAIASDSITPNTINN*
Ga0097621_1002684274	3300006237	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGTPGATFTYAGARYSVPPSGSIELIADGGKAYLAANGRSLPLDVWPIDAFGTRTVPVQVPATATDNITPNTINN*
Ga0097621_1011130423	3300006237	Miscanthus Rhizosphere	PAMNILHAITLAALLHGSPASPAVTCHKGTVSYKFVGTPGSSFTYAGAKYSVPRSGWVELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQETAAPQTHIDTEPIRTINN*
Ga0097621_1018301702	3300006237	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSIPPSGSIELLSDSGSKAYLAANGRSLPLDVWPIDAFGTRTVPLQAPAPAGDNTPNTINN*
Ga0068871_1009875921	3300006358	Miscanthus Rhizosphere	VVPALEYVPAMNILHAITLAALLHGSPASPAVTCHKGTISYKFVGSPGSTFTYAGAKYSVPNSGWIELLSESTDKGYLAASGRTLPLDVWPI
Ga0101567_106745841	3300006624	Soil	MNILHAITLAAILHGTPASPAVTCHKGTVSYKFVGTPGSTFSYAGAKYSVPKSGWIELLAEREDKGYLAATGRTLPLDVWPIDAFGTRTVPLQDTAAPQTHVDTEPIRTINN*
Ga0075521_102493341	3300006642	Arctic Peat Soil	VQCMNILHAITLAALLHHAPMAAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRSLPLDVWPIDAFGTRTVPVQAAPADAMAEQVAPVNPLNTISTINN*
Ga0075521_105962171	3300006642	Arctic Peat Soil	MNILHAITLAALLHHAPMTAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRSLPLDVWPIDAFGTRTVPVQTDSSAEQVAPVNPLNLVAEE*
Ga0066793_103133272	3300009029	Prmafrost Soil	MNILHAITLAALLHGSPAPAPVCHIGTVSYRFVGTPGATFVYSGTRYAIPSTGWVELLGGETIYLAANGRTLPLDVWPVDAFGTRTVPVQVAADSGQSAPINTLNTIN*
Ga0105245_10000003359	3300009098	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYRFTGTPGATFTYGGTQYSVPQSGSIELLSEGGDKVYLAASGRTLPLDVWPIDAFGTRTVPLQTTQSTPSSSDSAPIATINN*
Ga0105245_120756722	3300009098	Miscanthus Rhizosphere	MNILHAITLAAILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTINN*
Ga0105245_123973041	3300009098	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPTVTCHSGTVSYRFTGTPGSTFTYGGTRYAVPSSGSIELLSEGAGKEYLAANGRSLPLDVWPIDAFGTRTVPLQTTQSAPAASGDSAPISTINN*
Ga0105248_127884431	3300009177	Switchgrass Rhizosphere	MVPALDYVPAMNILHAITLAALLHGSPASPAVTCHKGTVSYKFVGTPGSTFTYAGAKYSVPRSGWVELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTINN*
Ga0134121_101229332	3300010401	Terrestrial Soil	MNILHAITLAALLQHAPAVPVVTCHTGTVSYKFVGTPGATFSYAGATYSVPSSGSIELLAVGGKAYLAANGRSLPLDASPLDAFGTRTVPLQAPAAAGDTIPNTINN*
Ga0137392_100861791	3300011269	Vadose Zone Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGARYVVPQSGWIELVANGGQRAYLAANGRTLPLDVWPIDAFGTRTVPLQTPATASDAGAIATINN
Ga0137392_106763452	3300011269	Vadose Zone Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGARYVVPQSGWIELVANGGQRAYLAANGRTLPLDVWPIDAFGTRTVPLQAVSSGPVEGGSGPISMINN*
Ga0137392_114804182	3300011269	Vadose Zone Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGTRYVVPQSGWIELVANGGQRAYLAANGRTLPLDVWPIDAFGTRTV
Ga0137393_112444132	3300011271	Vadose Zone Soil	AMNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGARYVVPQSGWIELVANGGQRAYLAANGRTLPLDVWPIDAFGTRTVPLQAASSGPAQIESGTISTINN*
Ga0137376_103377404	3300012208	Vadose Zone Soil	VLLHHSPAAPVVVCHSGTVSYKFVGAPASTFTYGGTPYSVPRSGSIELLSEGADKAYLAANGRTLPLDVWPIDAFGTRTVPLQTTQSAPASDSAPISTINN*
Ga0137413_113238991	3300012924	Vadose Zone Soil	MNILHAITLAAILHGSPASPAVTCHKGTVSYKFVGTPGSTFTYAGVKYSVPNSGWIELLSEREDKGYLAASGRTLPLDVWPIDAFGTRTVPLQDTATPQTHTDTEPIRTINN*
Ga0137419_106093563	3300012925	Vadose Zone Soil	VVPALEYVPAMNILHAITLAAILHSSPAAPAVTCHKGTVSYKFVGTPGSTFTYAGAKYSVPNSGWIELLSEKQDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDTAAPQTHTDTEPIRTINN*
Ga0137404_102232663	3300012929	Vadose Zone Soil	MNILHAITLAALLHHSPAPIPVCHSGTVSYKFVGTPGMTFTYSGARYSVPARGWVEILSEDKVYLAANGRTLPLDVWPIDAFGTRTVPLSPTTDAGPSAPVNTLNALNTVD*
Ga0137404_102395722	3300012929	Vadose Zone Soil	MVPALDYVPAMNILHAITLAALLHHTPVAAPVCHSGTVSYKFVGTPGSTFTYAGERYSIPARGSIELLTSEKVYLAANGRTLPLDVWPIDAFGTRTVPVQAVSDSPEQTAPVNTLNTVNN
Ga0137410_112707242	3300012944	Vadose Zone Soil	MNILHAITLAALLHHAPMTAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRTLPLDVWPIDAFGTRTVPVQAAQADSSAGQVAPANPLNTVNK*
Ga0137410_116638921	3300012944	Vadose Zone Soil	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGTPGATFTYAGAKYSVPQSGWIELTADSGKVYLAANGRTLPLDVWPIDAFGTRTVPVQEPTTANENIAPTTINN*
Ga0164299_114420892	3300012958	Soil	MNILHAITLTALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGWIELLADGGKVYLAANGRSLPLEVWPIDAFGTRTVPVQPPATANDNITPNTINN*
Ga0157369_10000123117	3300013105	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSLPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPAAAGDNTPNTINN*
Ga0157374_10000005356	3300013296	Miscanthus Rhizosphere	MNILHAITIAALLHHAPAVPAVTCHTGTVSYKFVGTPGATFTYAGATYSIPRSGWIELLSDNGNKVYFAANGRSLPLDVWPIDAFGTRTVPVQQPAAASDNITPNTINN*
Ga0157374_1000001994	3300013296	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGAPGATFTYAGAKYSIPPSGWIELIDGGKVYLAANGRTLPLDVWPIDAFGTRTVPVQQAETATDNSTPSTINN*
Ga0157374_112308532	3300013296	Miscanthus Rhizosphere	MNILHAITLAAILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRSLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTINN*
Ga0157378_100076497	3300013297	Miscanthus Rhizosphere	LDYVPAMNILHAITLAAVLHSTPAPAVVCHKGTVSYKFVGTPGSTFSYAGAKYSVPKSGWIELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQEAAAPQTHVDTEPIRTINN*
Ga0157378_102274362	3300013297	Miscanthus Rhizosphere	MNILHAITLAALLHGSPASPAVTCHKGTISYKFVGSPGSTFTYAGAKYSVPNSGWIELLSESTDKGYLAASGRTLPLDVWPIDAFGTRTGPLQETSLPQTHSDTEPIRTINN*
Ga0157375_1000003147	3300013308	Miscanthus Rhizosphere	MNILHAITLATILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRSLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTINN*
Ga0157375_1000063820	3300013308	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPQSGWIELLADGGKVYLAANGRSLPLEVWPIDAFGTRTVPVQPPATANDNITPNTINN*
Ga0157375_103367452	3300013308	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYRFTGTPGSTFTYGGTRYAVPSSGSIELLSEGAGKEYLAANGRTLPLDVWPIDAFGTRTVPLQTTQSAPAAAGDSAPISTINN*
Ga0163163_126821282	3300014325	Switchgrass Rhizosphere	MNILHAITLAALLHHAPAAPMVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPAAAGDNIPNTINN*
Ga0157376_1000002144	3300014969	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPATAGDNVPNTINN*
Ga0167645_1089742	3300015068	Glacier Forefield Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGAAFVYEGARYVVPNSGSIELVADSGSKVYLAANGRTLPLDVWPIDAFGTRTVPLQAPSSVPAQGGDSTQISTINN*
Ga0167622_10009876	3300015158	Glacier Forefield Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYKFVGTPGATFTYGGARYAVPRSGWIELLGDGGKVYLAANGRTLPLDVWPMDAFGTRTVPVQAPATASDDITPNTINN*
Ga0167653_10055252	3300015162	Glacier Forefield Soil	MNLLHAITLAALLHHAPATPAVTCHTGTVSYKFVGAPGATFTYAGAKYSVPASGWIELIDSGKVYLAANGRTLPLDVWPIDAFGTRTVPVQQAETATDNSTPSTINN*
Ga0167661_10112572	3300015167	Glacier Forefield Soil	MNILHAITLAALLHHTPTAAVVCHTGTVSYKFVGAPGATFTYAGAKYSVPKNGSIELLSEREDHAYLAANGRRLPLDVWPIDAFGTRTVPLQDATAVPTSQNDSAPISTINN*
Ga0167631_10617201	3300015168	Glacier Forefield Soil	LLHHAPATPAVTCHTGTVSYKFVGAPGATFTYAGAKYSVPASGWIELIDSGKVYLAANGRTLPLDVWPIDAFGTRTVPVQPDTTPAGDNTPVTINN*
Ga0167648_10043977	3300015171	Glacier Forefield Soil	LDYDPAMNILHAITLAALLHHAPAPAPVCHTGTVSYKFIGTPGSTFTYMGTRYAVPASGWIELLGEGTNRAYLAANGKTLPLDVWPIDAFGTRSVPLQAETQTSGGDNAGINTINN*
Ga0167647_10452654	3300015199	Glacier Forefield Soil	MNILHAITLAALLHGSPAPAPVCHIGTVSYRFVGTPGATFVYSGTRYAIPASGWVELLGGETIYLAANGRSLPLDVWPLDAFGTRTVPVHVAADAGQNAPINTLNTIN*
Ga0137418_103425153	3300015241	Vadose Zone Soil	MVMVSALEYVQGMNILHAITLAAILHSSPAAPAVTCHKGTVSYKFVGTPGSTFTYAGAKYSVPNSGWIELLSEKQDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDTAAPQTHTDTEPIRTINN*
Ga0137403_104488142	3300015264	Vadose Zone Soil	MNILHAITLAALLHHTPVAAPVCHSGTVSYKFVGTPGSTFTYAGERYSIPARGSIELLTSEKVYLAANGRTLPLDVWPIDAFGTRTVPVQAVSDSPEQTAPVNTLNTVNN*
Ga0187823_101622823	3300017993	Freshwater Sediment	MNILHAITLAAFLHHAPAPTVVCHSGTVSYKFVGAPGATFTYAGARYSVPKSGWIELISERDDKAYLAANGKTLPLDVWPIDAFGTRTVPLQDASVVPPAQNDSGPIRTINN
Ga0066655_100788082	3300018431	Grasslands Soil	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGATYAIPRSGWIELLGDGGKVYLAANGRTLPLDVWPMDAFGTRTVPVQPPAAPATDNTTPNTINN
Ga0066662_120683091	3300018468	Grasslands Soil	MNILHAITLAALLHHAPAAPTVTCHIGTVSYRFVGTPGATFTYAGARYSVPQSGWIELLGDGGNTVYLAANGRTLPLDVWPIDVFGTRTVPVQPAATTSDNSTPNTINN
Ga0066662_121956361	3300018468	Grasslands Soil	MNILHAITLAALLHHAPAAPMVTCHTGTVSYRFVGMPGATFSYAGARYSVPASGWIELLGDGGNTVYLAANGRTLPLEVWPIDAFGTRTVPVQPPAAASDSSTPTTINN
Ga0193718_10718181	3300019999	Soil	MVSTFQYVAAMNILHAITLAAFLHHSPVPMPVCHSGTVSYKFVGTPGATFVYAGDRYSIPASGWVELLSTDKIYLAANGRTLPLDVWPIDAFGTRTVPLQAV
Ga0210399_101434762	3300020581	Soil	MNILHAITLAALLHSTPAPAVVCHSGTVSYKFVGAPGATFVYAGTRYSVPKSGSIELLSGRDDKAYLAANGRSLPLDVWPIDAFGTRTVPLQDASAVPTTPNDSGPISTINN
Ga0210399_103445612	3300020581	Soil	MNILHAITLAALLHSTPAPAVVCHSGTVSYKFVGAPGATFVYAGTRYSVPKSGWIELLSGRDDRAYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPTNQNDSGPISTINN
Ga0213873_100033185	3300021358	Rhizosphere	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGAPGATFTYAGAKYSIPASGWIELISDNGGKVYLAANGRTLPLDVWPIDAFGTRTVPVQPPATADN
Ga0213882_100257923	3300021362	Exposed Rock	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGAPGATFTYAGAKYSIPASGWIELISDNGGKVYLAANGRTLPLDVWPIDAFGTRTVPVQPPATADNTTPTLNN
Ga0210394_10000094134	3300021420	Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGETFAYEGASYTVPKSGSIELVADHGVRVYLAANGRTLPLEVWPIDAFGTRTVPLQAASSAPVQGDSAPISTINN
Ga0210394_10000094143	3300021420	Soil	MNILHAITLAALLHRSPAPIPVCHTGAVSYRFVGTPGATFVYEGARYVVPNSGSIELVADGGIRVYLAANGRTLPLDVWPIDAFGTRTVPLQAVSSSPAQGDSGPISTINN
Ga0210402_1000000681	3300021478	Soil	MNILHAITLAALLHSTPAPAVVCHSGTVSYKFVGAPGATFVYAGTRYSVPKSGWIELLSGRDDKAYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPTTPNDSGPISTINN
Ga0210402_100077548	3300021478	Soil	MNILHAITLAALLHSTPAPAVVCHSGTVSYKFVGTPGATFVYAGARYSVPKSGWIELLSGHDDKAYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPAPSDTAPISTINN
Ga0242658_10365541	3300022530	Soil	LVALLHHAPTAPAVVCHTGTVSYKFVGAPGATFTYAGATYSLPKSGWIELLSERSDKGYLAANGKTLPLDVWPIDAFGTRTVPLQDASAVPTTQNDSGSISTINN
Ga0233354_1034991	3300023021	Soil	LHSAPAPTVVCHSGTVSYKFVGAPGATFTYAGAKYSLPKSGWIELLSGHDDKAYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPATQNDSGPISTINN
Ga0233356_100003944	3300023046	Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYKFVGTPGATFTYAGARYSVPQSGWIELLGDGGKVYLAANGRTLPLDVWPIDAFGTRTVPVQAPTTAGDNSTPNTINN
Ga0233356_100003947	3300023046	Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYKFVGTPGATFTYAGARYSVPQSGWIELLGDSGKVYLAANGRTLPLDVWPIDAFGTRTVPVQQPETAATDNTPNTINN
Ga0247694_10009853	3300024178	Soil	MNILHAITLAALLHHAPAPIPVCHAGAVSYRFVGTVGATFSYEGASYTVPASGWIELVANGGGRVYLAANGRTLPLDVWPIDAFGTRTVPLQVASSAPAQSEGGTISTINN
Ga0247669_10206602	3300024182	Soil	MVSTLEYVAAMNILHAITLAAFLHHSPAPIPVCHSGTVSYKFVGTPGATFVYAGDRYSIPASGWVELLSSEKVYLAANGRTLPLDVWPIDAFGTRTVPLQAVPETSPNASANPTITQVTTVASNAIN
Ga0247673_10113282	3300024224	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRT
Ga0247664_11058481	3300024232	Soil	LHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPTTQNESSPIGTINN
Ga0247677_10055501	3300024245	Soil	MNILHAITLAALLHHAPMTAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRSLPLDVWPIDAFGARTVPVQAAPADSSAGQVAPVNPLNAVNN
Ga0247677_10063102	3300024245	Soil	MVSTLEYVAAMNILHAITLAAFLHHSPAPIPVCHSGTVSYKFVGTPGATFVYAGDRYSIPASGWVELLSSEKVYLAANGRTLPLDVWPIDAFGTRTVPLQAVPDTSPNSPANSVTTVASNTIN
Ga0247677_10160571	3300024245	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDA
Ga0247680_100075112	3300024246	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRKLPLDVWPIDAFGTRTVPLQDASAVPTTQNDSSPISTINN
Ga0247679_10036211	3300024251	Soil	MNILHAITLAALLHHAPMTAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRSLPLDVWPIDAFGTRTVPVQAAPADSSAGQVAPVNPLNTVNN
Ga0247679_10046611	3300024251	Soil	SKRFQSNGLMVSTLEYVAAMNILHAITLAAFLHHSPAPIPVCHSGTVSYKFVGTPGATFVYAGDRYSIHASGWVELLSSEKIYLAANGRTLPLDVWPIDAFGTRTVPLQAVPETSPNSPANSVTTVASNTIN
Ga0247692_10240552	3300024279	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRT
Ga0247666_10112212	3300024323	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPTTQNDSSPISTINN
Ga0247666_10543381	3300024323	Soil	PAPIPVCHSGTVSYKFVGTPGATFVYAGDRYSIPASGWVELLSSEKVYLAANGRTLPLDVWPIDAFGTRTVPLQAVPDTSPNSPANSVTTVASNTIN
Ga0209584_101582212	3300025878	Arctic Peat Soil	MNILHAITLAALLHHAPMTAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRSLPLDVWPIDAFGTRTVPVQTDSSAEQVAPVNPLNLVAEE
Ga0207705_105145562	3300025909	Corn Rhizosphere	VVPALDYVPAMNILHAITLAAILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRSLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTIN
Ga0207654_112633101	3300025911	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDA
Ga0207694_10000001940	3300025924	Corn Rhizosphere	MNILHAITLAALLHHAPAAPAVTCHTGTVSYKFVGAPGATFTYAGAKYSIPPSGWIELIDGGKVYLAASGRTLPLDVWPIDAFGTRTVPVQQAETATDNSTPSTINN
Ga0207650_1000098913	3300025925	Switchgrass Rhizosphere	MNILHAITLAALLHHSPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPTAAGDNTPNTINN
Ga0207650_100528955	3300025925	Switchgrass Rhizosphere	MNILHAITLAALLHRAPAAPAVTCHSGTVSYRFMGTPGSTFTYGGTQYAVPRSGSIELLSEAGDKVYLAANGRTLPLDVWPIDAFGTRAVPLQTTESTPATSDSAPVTTINN
Ga0207687_10000002354	3300025927	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYRFTGTPGATFTYGGTQYSVPQSGSIELLSEGGDKVYLAASGRTLPLDVWPIDAFGTRTVPLQTTQSTPSSSDSAPIATINN
Ga0207689_100066995	3300025942	Miscanthus Rhizosphere	MNILHAITLAALLHGSPASPAVTCHKGTISYKFVGSPGSTFTYAGAKYSVPNSGWIELLSESTDKGYLAASGRTLPLDVWPIDAFGTRTVPLQETSLPQTHSDTEPIRTINN
Ga0207661_10000013299	3300025944	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSLPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPATAGDNTPNTINN
Ga0207661_104230062	3300025944	Corn Rhizosphere	MNILHAITLAALLHRAPAAPAVTCHSGTVSYRFVGTPGSTFTYGGTRYSVPRSGSIELLSEGKVYLAANGRTLPLDVWPIDGFGTRAVPLQTTESAPPASDSAPISTINN
Ga0207679_113992082	3300025945	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSLPPSGSIELLSDSGSKAYLAANGRTLT
Ga0207640_100221232	3300025981	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPPTAGDNTPNTINN
Ga0207640_106680261	3300025981	Corn Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYRFTGTPGSTFTYGGTRYAVPSSGSIELLSEGAGKEYLAANGRTLPLDVWPIDAFGTRTVPLQTTQSAPAAAGDSAPISTINN
Ga0207677_1000006569	3300026023	Miscanthus Rhizosphere	MNILHAITLAALLHHAPAAPVVTCHTGTVSYKFVGTPGATFTYAGAKYSVPPSGSIELLSDSGSKAYLAANGRTLPLDVWPIDAFGTRTVPLQAPAAAGDNTPNTINN
Ga0207639_100608526	3300026041	Corn Rhizosphere	VVPALDYVPAMNILHAITLAAILHSAPAPAVVCHKGTVSYKFVGPVGSTFTYAGAKYSVPRSGWIELLAEREDKGYLAANGRTLPLDVWPIDAFGTRTVPLQETAAPQTHVDTEPIRTIN
Ga0209154_12485452	3300026317	Soil	MNILHAITLAALLHHAPTAPTVTCHTGTVSYRFVGTPGATFSYAGARYSVPGSGWIELLSDGGNKAYLAANGRTLPLDVWPIDAFGTRTVPVQPAAASSDNIIPNTINN
Ga0209131_10683454	3300026320	Grasslands Soil	MNILHAITLAALLHHAPAPTVVCHSGTVSYKFVGAPGATFTYAGAKYSVPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRTVPLQDASAVPTTQNDSSPISTINN
Ga0209059_10763323	3300026527	Soil	MNILHAITLAALLHHAPAAPTVTCHTGTVSYRFVGTPGATFTYAGARYSVPQSGWIELLGEGGKVYLAANGRTLPLDVWPIDVFGTRTVPVQPAATTSDNSTPNTINN
Ga0209474_101545904	3300026550	Soil	MNILHAITLAALLHHAPAAPKVTCHTGTVSYRFVGTPGATFTYAGASYSVPASGWIELLSDEKVYLAANGRTLPLDVWPIDAFGTRTVPVQPPAIASDSITPNTINN
Ga0208994_10102021	3300027164	Forest Soil	MNILHAITLAALLHGSPAPVVTCHTGTVSYKFVGAPGATFAYGGTKYSVPASGWIELLSERDGKGYLAANGKTLPLDVWPIDAFGTRTVPLQPTPSISGGGDAISTINN
Ga0208994_10129543	3300027164	Forest Soil	MNILHAITLAALLHHSPAPTPVCHSGTVSYKFVGTPGATFVYEGAQYSVPRSGWIELLAGNGPKAYLAANGRTLPLEVWPIDAFGTRTVPLQEVSSTPDSSAPPQISTINN
Ga0208994_10228272	3300027164	Forest Soil	MVLPLDHERGMNILLAITLAALLHRAPAPVVMCHPGTVSYRFLGPPGTRFTYEGTTYSLPPSGWIELIREGEESVYLAADGRKLPLDCWPIDAFGTRTVPVQEVSGMK
Ga0247663_10175631	3300028145	Soil	MNILHAITLAALLHHAPAPAVVCHTGTVSYKFVGTPGATFTYAGAKYSLPRSGWIELLSERDDKGYLAANGRTLPLDVWPIDAFGTRTVP
Ga0307511_1000235116	3300030521	Ectomycorrhiza	MNILHAITLAALLHGSPAPAVHCQKGTVSYKFVGSPGTTFTYGGTKYSVPASGWIELLSERDGKGYLAASGRTLPVDVWPIDTFGTRTVPLQPEPAAPAGDSSAISTINN
Ga0307511_100087113	3300030521	Ectomycorrhiza	MNILHAITLAALLHGTPAPTVTCHTGTVSYKFVGAPGATFTYGGTKYSVPASGWVELLSERNDKNYLAANGRTLPLDVWPIDAFGTRTVPLQATTPPTTGGGDTTISTINN
Ga0307469_115571812	3300031720	Hardwood Forest Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGTRYVVPPSGSIELVADSGTRVYLAANGRTLPLEVWPIDAFGTRTVPLQAVSSEPVEGGSGSISTINN
Ga0307475_111720501	3300031754	Hardwood Forest Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGARYVVPPSGSIELVADSGIRVYLAANGRTLPLEVWPIDAF
Ga0307470_10000005112	3300032174	Hardwood Forest Soil	MVPALDYGSAMNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGARYVVPPSGSIELVADSGIRVYLAANGRTRPLDVWPIDAFGTRTVPLQDASSAPVQGDSGSISTIN
Ga0307470_1000004044	3300032174	Hardwood Forest Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGTRYVVPPSGSIELVADSGTRVYLAANGRTLPLEVWPIDAFGTRTVPLQDPTAAGDAGTIATLNN
Ga0307470_1000005047	3300032174	Hardwood Forest Soil	MNILHAITLAALLHHAPMTAPVCHKGTVSYKFVGTPGATFVYAGDRYSIPANGSIELLTSDTVYLAANGRSLPLDVWPIDAFGTRTVPVQAAPADSSAEQVAPVNPLNTVNN
Ga0307470_100034907	3300032174	Hardwood Forest Soil	MVPTLEYVAAMNILHAITLAAFLHHSPAPMPVCHSGTVSYKFVGTPGATFVYAGDRYSIPASGWVELLSSEKVYLAANGRTLPLDVWPIDAFGTRTVPLQAAPETSPNPPANPTSTPVTTVASNTIN
Ga0307471_1000232543	3300032180	Hardwood Forest Soil	MVPALDYGSAMNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGARYVVPPSGSIELVADSGIRVYLAANGRTRPLDVWPIDAFGTRTVPLQAASSAPAQSESGTISTIN
Ga0307471_1010861303	3300032180	Hardwood Forest Soil	MNILHAITLAALLHHAPAPIPVCHSGAVSYRFVGTPGATFAYEGTRYVVPQSGWIELVANGGQRAYLAANGRTLPLDVWPIDAFGTRTVPLQAPNTAGDAGPIATLNN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054123

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences