NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F053920

Metagenome / Metatranscriptome Family F053920

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053920
Family Type Metagenome / Metatranscriptome
Number of Sequences 140
Average Sequence Length 45 residues
Representative Sequence ALRCPEEGAYNMLAFLERAGGVRAYLAQIGLSPQEIERLRARLRD
Number of Associated Samples 114
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.71 %
% of genes near scaffold ends (potentially truncated) 98.57 %
% of genes from short scaffolds (< 2000 bps) 82.14 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.286 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(30.714 % of family members)
Environment Ontology (ENVO) Unclassified
(26.429 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.571 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.21%    β-sheet: 0.00%    Coil/Unstructured: 54.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF04828GFA 44.29
PF11941DUF3459 11.43
PF13348Obsolete Pfam Family 7.14
PF04820Trp_halogenase 3.57
PF16925TetR_C_13 2.86
PF03807F420_oxidored 2.86
PF00128Alpha-amylase 2.14
PF05345He_PIG 1.43
PF00106adh_short 0.71
PF11964SpoIIAA-like 0.71
PF00593TonB_dep_Rec 0.71
PF02634FdhD-NarQ 0.71
PF13520AA_permease_2 0.71
PF13473Cupredoxin_1 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG3791Uncharacterized conserved proteinFunction unknown [S] 44.29
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 2.14
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 2.14
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 2.14
COG3280Maltooligosyltrehalose synthaseCarbohydrate transport and metabolism [G] 2.14
COG1526Formate dehydrogenase assembly factor FdhD, a sulfurtransferaseEnergy production and conversion [C] 0.71

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.29 %
UnclassifiedrootN/A5.71 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001166|JGI12694J13545_1012370Not Available893Open in IMG/M
3300002909|JGI25388J43891_1058442All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium579Open in IMG/M
3300005171|Ga0066677_10227595Not Available1052Open in IMG/M
3300005175|Ga0066673_10068798All Organisms → cellular organisms → Bacteria1833Open in IMG/M
3300005175|Ga0066673_10116402All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1453Open in IMG/M
3300005176|Ga0066679_10021201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3446Open in IMG/M
3300005187|Ga0066675_10285133All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1190Open in IMG/M
3300005332|Ga0066388_103506136All Organisms → cellular organisms → Bacteria → Proteobacteria801Open in IMG/M
3300005435|Ga0070714_100002342All Organisms → cellular organisms → Bacteria → Proteobacteria13933Open in IMG/M
3300005436|Ga0070713_100204537All Organisms → cellular organisms → Bacteria → Proteobacteria1785Open in IMG/M
3300005446|Ga0066686_10154416All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae1519Open in IMG/M
3300005533|Ga0070734_10507866All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005542|Ga0070732_10866414All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005554|Ga0066661_10006208All Organisms → cellular organisms → Bacteria → Proteobacteria5645Open in IMG/M
3300005569|Ga0066705_10021699All Organisms → cellular organisms → Bacteria → Proteobacteria3325Open in IMG/M
3300005575|Ga0066702_10804541All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium559Open in IMG/M
3300005576|Ga0066708_10989943All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria522Open in IMG/M
3300005586|Ga0066691_10183750Not Available1213Open in IMG/M
3300005591|Ga0070761_10951408All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300005610|Ga0070763_10657788All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium611Open in IMG/M
3300006797|Ga0066659_10082355All Organisms → cellular organisms → Bacteria → Proteobacteria2139Open in IMG/M
3300006800|Ga0066660_10027788All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3428Open in IMG/M
3300006871|Ga0075434_100207294All Organisms → cellular organisms → Bacteria → Proteobacteria1981Open in IMG/M
3300009826|Ga0123355_11892133All Organisms → cellular organisms → Bacteria → Proteobacteria558Open in IMG/M
3300010048|Ga0126373_11291120All Organisms → cellular organisms → Bacteria → Proteobacteria796Open in IMG/M
3300010303|Ga0134082_10165236All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300010321|Ga0134067_10088530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1046Open in IMG/M
3300010322|Ga0134084_10124607All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300010326|Ga0134065_10061863Not Available1176Open in IMG/M
3300010335|Ga0134063_10027805All Organisms → cellular organisms → Bacteria2383Open in IMG/M
3300010358|Ga0126370_11133786All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300010358|Ga0126370_12429240All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria521Open in IMG/M
3300010359|Ga0126376_10429989All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300010360|Ga0126372_12311404All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria587Open in IMG/M
3300010376|Ga0126381_101825986All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300012199|Ga0137383_10063816All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2647Open in IMG/M
3300012203|Ga0137399_10044125All Organisms → cellular organisms → Bacteria → Proteobacteria3190Open in IMG/M
3300012203|Ga0137399_11419166All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300012205|Ga0137362_10027516All Organisms → cellular organisms → Bacteria → Proteobacteria4466Open in IMG/M
3300012205|Ga0137362_11586197All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium541Open in IMG/M
3300012207|Ga0137381_10848052All Organisms → cellular organisms → Bacteria → Proteobacteria791Open in IMG/M
3300012285|Ga0137370_10174571All Organisms → cellular organisms → Bacteria → Proteobacteria1252Open in IMG/M
3300012683|Ga0137398_10037027All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium2812Open in IMG/M
3300012917|Ga0137395_10558248All Organisms → cellular organisms → Bacteria → Proteobacteria826Open in IMG/M
3300012930|Ga0137407_10497209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1138Open in IMG/M
3300012975|Ga0134110_10035131All Organisms → cellular organisms → Bacteria1964Open in IMG/M
3300012975|Ga0134110_10160996All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300012977|Ga0134087_10528641All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium598Open in IMG/M
3300014157|Ga0134078_10589912All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium530Open in IMG/M
3300014200|Ga0181526_10262100All Organisms → cellular organisms → Bacteria → Proteobacteria1102Open in IMG/M
3300015241|Ga0137418_10009275Not Available9051Open in IMG/M
3300015241|Ga0137418_10062416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3408Open in IMG/M
3300016294|Ga0182041_10062463All Organisms → cellular organisms → Bacteria2578Open in IMG/M
3300016341|Ga0182035_10781305All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria837Open in IMG/M
3300016341|Ga0182035_11915806Not Available538Open in IMG/M
3300017970|Ga0187783_10893325All Organisms → cellular organisms → Bacteria → Proteobacteria640Open in IMG/M
3300017972|Ga0187781_10563550All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300017974|Ga0187777_10963584All Organisms → cellular organisms → Bacteria → Proteobacteria616Open in IMG/M
3300018032|Ga0187788_10031292All Organisms → cellular organisms → Bacteria1744Open in IMG/M
3300018058|Ga0187766_10393940All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300018058|Ga0187766_11326895All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium525Open in IMG/M
3300018062|Ga0187784_10223138All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300018085|Ga0187772_10292720All Organisms → cellular organisms → Bacteria → Proteobacteria1114Open in IMG/M
3300018431|Ga0066655_10167143All Organisms → cellular organisms → Bacteria → Proteobacteria1325Open in IMG/M
3300020581|Ga0210399_11020270All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300021088|Ga0210404_10324138All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300021088|Ga0210404_10904517All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium505Open in IMG/M
3300021171|Ga0210405_10443342All Organisms → cellular organisms → Bacteria → Proteobacteria1021Open in IMG/M
3300021181|Ga0210388_11459813All Organisms → cellular organisms → Bacteria → Proteobacteria572Open in IMG/M
3300021474|Ga0210390_10874331All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300021477|Ga0210398_11460156All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300021559|Ga0210409_10795308All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300021559|Ga0210409_10934193All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300021559|Ga0210409_10936871All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300021560|Ga0126371_11162005All Organisms → cellular organisms → Bacteria → Proteobacteria909Open in IMG/M
3300021560|Ga0126371_12905151All Organisms → cellular organisms → Bacteria → Proteobacteria581Open in IMG/M
3300021560|Ga0126371_13260073All Organisms → cellular organisms → Bacteria → Proteobacteria549Open in IMG/M
3300022531|Ga0242660_1240628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium512Open in IMG/M
3300025924|Ga0207694_10977805All Organisms → cellular organisms → Bacteria → Proteobacteria716Open in IMG/M
3300025927|Ga0207687_11590662All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Devosiaceae561Open in IMG/M
3300025929|Ga0207664_11764958All Organisms → cellular organisms → Bacteria → Proteobacteria541Open in IMG/M
3300026318|Ga0209471_1281253All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1555Open in IMG/M
3300026527|Ga0209059_1000504All Organisms → cellular organisms → Bacteria → Proteobacteria17929Open in IMG/M
3300026527|Ga0209059_1261243All Organisms → cellular organisms → Bacteria → Proteobacteria582Open in IMG/M
3300026550|Ga0209474_10031680All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3953Open in IMG/M
3300026552|Ga0209577_10003127All Organisms → cellular organisms → Bacteria → Proteobacteria15626Open in IMG/M
3300027061|Ga0209729_1054282All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300027676|Ga0209333_1151496All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300027684|Ga0209626_1005439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2846Open in IMG/M
3300027684|Ga0209626_1143141All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300027826|Ga0209060_10251309All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300027842|Ga0209580_10617594All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria537Open in IMG/M
3300027911|Ga0209698_11258170All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium543Open in IMG/M
3300028536|Ga0137415_10676216All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300031544|Ga0318534_10055621All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2222Open in IMG/M
3300031549|Ga0318571_10375632Not Available550Open in IMG/M
3300031708|Ga0310686_110915510All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300031720|Ga0307469_10703898All Organisms → cellular organisms → Bacteria → Proteobacteria916Open in IMG/M
3300031723|Ga0318493_10174822All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1123Open in IMG/M
3300031724|Ga0318500_10004905All Organisms → cellular organisms → Bacteria → Proteobacteria4215Open in IMG/M
3300031724|Ga0318500_10392534All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300031736|Ga0318501_10487675All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300031740|Ga0307468_100088579All Organisms → cellular organisms → Bacteria → Proteobacteria1795Open in IMG/M
3300031744|Ga0306918_10205009All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300031753|Ga0307477_10060593All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2607Open in IMG/M
3300031753|Ga0307477_10974841All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria557Open in IMG/M
3300031764|Ga0318535_10370534All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria640Open in IMG/M
3300031771|Ga0318546_10273129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1166Open in IMG/M
3300031777|Ga0318543_10370115All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300031779|Ga0318566_10527448All Organisms → cellular organisms → Bacteria → Proteobacteria577Open in IMG/M
3300031781|Ga0318547_10024397All Organisms → cellular organisms → Bacteria3029Open in IMG/M
3300031781|Ga0318547_10414804All Organisms → cellular organisms → Bacteria827Open in IMG/M
3300031794|Ga0318503_10178152All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300031797|Ga0318550_10106857All Organisms → cellular organisms → Bacteria → Proteobacteria1324Open in IMG/M
3300031797|Ga0318550_10207018All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria950Open in IMG/M
3300031798|Ga0318523_10374983All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300031819|Ga0318568_10427555All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300031832|Ga0318499_10200547All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria778Open in IMG/M
3300031845|Ga0318511_10125712All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1108Open in IMG/M
3300031890|Ga0306925_11397644All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300031897|Ga0318520_10163808All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300031897|Ga0318520_10822509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium583Open in IMG/M
3300031897|Ga0318520_11033695All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria519Open in IMG/M
3300031946|Ga0310910_10766767All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria761Open in IMG/M
3300031947|Ga0310909_10497667All Organisms → cellular organisms → Bacteria → Proteobacteria1022Open in IMG/M
3300031962|Ga0307479_10013445All Organisms → cellular organisms → Bacteria → Proteobacteria7664Open in IMG/M
3300031962|Ga0307479_10153531All Organisms → cellular organisms → Bacteria → Proteobacteria2259Open in IMG/M
3300032010|Ga0318569_10261625All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300032041|Ga0318549_10041016All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1876Open in IMG/M
3300032063|Ga0318504_10477449All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria597Open in IMG/M
3300032066|Ga0318514_10079119All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1639Open in IMG/M
3300032066|Ga0318514_10584818All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300032067|Ga0318524_10282405All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300032067|Ga0318524_10285289All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300032067|Ga0318524_10662258Not Available550Open in IMG/M
3300032180|Ga0307471_103343897All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium568Open in IMG/M
3300032892|Ga0335081_10325396All Organisms → cellular organisms → Bacteria → Proteobacteria2019Open in IMG/M
3300032892|Ga0335081_10840946All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1091Open in IMG/M
3300033134|Ga0335073_10702319All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1105Open in IMG/M
3300033805|Ga0314864_0117506All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria659Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil30.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.29%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.43%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.43%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.71%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.57%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.57%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.14%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.14%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.43%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.43%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.43%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.71%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.71%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.71%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.71%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.71%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001166Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2EnvironmentalOpen in IMG/M
3300002909Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031777Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12694J13545_101237023300001166Forest SoilPEGAYNMLEFLDRAGGVRPYLAQIGLAAAIIERLRARLRD*
JGI25388J43891_105844223300002909Grasslands SoilRYPDSDPERILEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0066677_1022759523300005171SoilEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0066673_1006879843300005175SoilPQRIVEALRCPEEGAYNMLQFLADAGGVRAYLAQIGLKEHVIERLRGRLRS*
Ga0066673_1011640223300005175SoilPQRIVEALRCPEEGAYNMLQFLADAGGVRAYLAQIGLKEPEIERLRGRLRSRAPRRA*
Ga0066679_1002120133300005176SoilEALRCPEEGAYNMLQFLAAAGGVRAYLAHIGLQEGEIERLRGRLR*
Ga0066675_1028513323300005187SoilPQRIVEALRCPEEGAYNMLQFLADAGGVRAYLAQIGLKEPEIERLRGRLRS*
Ga0066388_10350613623300005332Tropical Forest SoilRIIEALRCPEIGAYNMLRFLEHSGGVRAYLSELGLSAAQIDALRARLRG*
Ga0070714_100002342163300005435Agricultural SoilILEALRCPEEGAYNMLAFLERAGGVRAYLTKIGLSAHEIAQLRARLRD*
Ga0070713_10020453713300005436Corn, Switchgrass And Miscanthus RhizosphereLRCPEEGAYNMLAFLERAGGVRGYLAQIGVSPPEIARLRARLRD*
Ga0066686_1015441633300005446SoilSDPERILEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0070734_1050786613300005533Surface SoilNMLKFLAHAGGVRAYLGEIGLSRAEIAALRARLRE*
Ga0070732_1086641413300005542Surface SoilERERILEALRCPVEGAYNMLAFLERVGGVRAYLAQIGLSADEIARLRARLRD*
Ga0066661_1000620883300005554SoilNMLKFLADAGGVRAYLAQIGLKEHVVERLRGRLRS*
Ga0066705_1002169913300005569SoilLRCPEEGAYNMLQFLADAGGVRAYLAQIGLKEHVIERLRGRLRS*
Ga0066702_1080454113300005575SoilALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRD*
Ga0066708_1098994313300005576SoilAYNMLQFLADAGGVRAYLAQIGLKEHVIERLRGRLRS*
Ga0066691_1018375023300005586SoilERILEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0070761_1095140813300005591SoilAHNMLKFLENAGGVRVYLREIGLSEAQIRALRARLRS*
Ga0070763_1065778813300005610SoilPERILEALRCPEAGAYNMLKFLEDAGGIRAYLRDIGLTEAQIAALRARLRS*
Ga0066659_1008235513300006797SoilPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0066660_1002778813300006800SoilEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRD*
Ga0075434_10020729433300006871Populus RhizosphereLRCPEQGAYNMLAFLERAGGVRAYLAKIGLSAAEIARLRARLRD*
Ga0123355_1189213313300009826Termite GutLRCPEEGAHNMLAFLERAGGVRAYLAQIGLTPEEVVRLRSRLRD*
Ga0126373_1129112023300010048Tropical Forest SoilMLKFLSDAGGVRAYLGEIGLASEEITALRARLRE*
Ga0134082_1016523613300010303Grasslands SoilEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0134067_1008853013300010321Grasslands SoilMLQFLADAGGVRAYLEQIGLKEPEIERLRGRLRS*
Ga0134084_1012460723300010322Grasslands SoilYNMLQFLADAGGVRAYLAQIGLKEDEIERLRRRLRG*
Ga0134065_1006186313300010326Grasslands SoilHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0134063_1002780543300010335Grasslands SoilLEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0126370_1113378613300010358Tropical Forest SoilERIIEALRCPESGAYNMLEFLGRAGGVRAYLAELGLSARQIAALRARLRDSA*
Ga0126370_1242924013300010358Tropical Forest SoilRCPEEGAYNMLAFLERAGGVRGYLAQIGVSPPEIARLRARLRD*
Ga0126376_1042998913300010359Tropical Forest SoilQGAHNMLNFLARAGGVRAYLRQIGLSEDEVSQLRARLRG*
Ga0126372_1231140413300010360Tropical Forest SoilERARILEALRCPEEGAYNMLAFLERGGGVRAYLAQIGLTPYEIARLRERLRD*
Ga0126381_10182598613300010376Tropical Forest SoilTRNEILAVLHCPEEGAYNMLKFLAHAGGVRAYLREIGLTRGEIATLRARLRD*
Ga0137383_1006381633300012199Vadose Zone SoilLEALHCPEEGAYNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0137399_1004412563300012203Vadose Zone SoilNMLKFLADTGGVRAYLAQIGLREDEIERLRARLRS*
Ga0137399_1141916623300012203Vadose Zone SoilLRCPEEGAHNMLKFLTDSGGVRAYLAQIGLEELDIERLRARLRT*
Ga0137362_1002751613300012205Vadose Zone SoilEADPQRILEALRCPEEGAYNMLQFLAAAGGVRAYLAHIGLQKDEVERLRGRLRD*
Ga0137362_1158619713300012205Vadose Zone SoilEADPQRILEALRCPEEGAYNMLQFLAAAGGVRAYLAHIGLQEDEIERLRGRLR*
Ga0137381_1084805213300012207Vadose Zone SoilGAYNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0137370_1017457113300012285Vadose Zone SoilEALRCPEEGVHNMLQFLADAGGVRAYLAQIGLKENQIERLRARLRA*
Ga0137398_1003702743300012683Vadose Zone SoilEGAYNMLQFLAAAGGVRAYLAHIGLQEDEIERLRARLRD*
Ga0137395_1055824813300012917Vadose Zone SoilMLQFLAAAGGVRAYLAHIGLQEDEIERLRARLRG*
Ga0137407_1049720913300012930Vadose Zone SoilALRCPEEGAYNMLQFLAAAGGVRAYLAHIGLQEDEIERLRGRLR*
Ga0134110_1003513113300012975Grasslands SoilILEALHCPEDGAYNMLQFLADAGGVRAYLAQIGLKEDEIERLRRRLRG*
Ga0134110_1016099613300012975Grasslands SoilILEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG*
Ga0134087_1052864123300012977Grasslands SoilEADPQRILEALHCPEDGAYNMLQFLADAGGVRAYLAQIGLKEDEIERLRRRLRG*
Ga0134078_1058991223300014157Grasslands SoilRILEALHCPEDGAYNMLQFLADAGGVRAYLAQIGLKEDEIERLRRRLRG*
Ga0181526_1026210013300014200BogALRCPEEGAHNMLKFLENAGGIRAYLREIGLSETQIRALRGRLRS*
Ga0137418_1000927513300015241Vadose Zone SoilGAYNMLQFLAAAGGVRAYLAHIGLQQDEIERLRGRLR*
Ga0137418_1006241613300015241Vadose Zone SoilGAYNMLQFLAAAGGVRAYLAHIGLQEDEIERLRGRLR*
Ga0182041_1006246313300016294SoilTERERILEALRCPEEGAYNMLAFLERAGGVRTYLAQIGLTSQEIAQLRARLRD
Ga0182035_1078130513300016341SoilERILDALRCPEEGAYNMLAFLERAGGVRAYLREIGLATEEIARLRARLRD
Ga0182035_1191580613300016341SoilEGTYNMLAFLESSGGVRAYLGEIGLSADEITRLRARLRD
Ga0187783_1089332523300017970Tropical PeatlandEEGAYRMLEFLELAGGVRAYLEQIGLSADEIARLRARLRS
Ga0187781_1056355023300017972Tropical PeatlandRILDALRCPKQGAHNMLRFLESTGGVRAYLAQIGLTAAEIGRLRARLRD
Ga0187777_1096358423300017974Tropical PeatlandAYNMLKFLAHAGGVRAYLKEIGLASAEIAALRARLRE
Ga0187788_1003129243300018032Tropical PeatlandYNMLKFLAHAGGVRAYLREIGLAGDEIAALRARLRE
Ga0187766_1039394023300018058Tropical PeatlandYAHLDPERILAALYCPEEGAYNMLKFLAHAGGVRAYLREIGLGGDEIAALRARLRE
Ga0187766_1132689523300018058Tropical PeatlandHLDPERILAALHCPEEGAYNMLKFLAHAGGVRAYLREIGLSREEIAVLRARLRE
Ga0187784_1022313833300018062Tropical PeatlandILAALHCPEEGAYNMLKFLAHAGGVRAYLREIGLRSDEIAALRARLRE
Ga0187772_1029272033300018085Tropical PeatlandALHCPEEGAHNMLKFLAHAGGVRAYLQEIGLTVTEIARLRGRLRD
Ga0066655_1016714333300018431Grasslands SoilSDPERILEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG
Ga0210399_1102027023300020581SoilRILEALRCPEEGAHNMLKFLENAGGVRAYLREIGLSEAQIRALRMRLRS
Ga0210404_1032413813300021088SoilDPDEILRALHCPEEGAYNMLKFLTHAGGVRAYLREIGLTRGEIATLHARLRE
Ga0210404_1090451713300021088SoilDPQRILEALRCPEEGAHNMLKFLADAGGVRAYLVQIGLNEDEIERLRARLRT
Ga0210405_1044334213300021171SoilEEGAHNMLKFLENAGGVRVYLHEIGLSEAQIRALRARLRS
Ga0210388_1145981313300021181SoilNMLKFLENAGGVRAYLHEIGLSEAQIRALRMRLRS
Ga0210390_1087433113300021474SoilAHNTLKFLENAGGVRAYLHEIGLSEAQIRALRMRLRS
Ga0210398_1146015623300021477SoilEGAHNMLQFLAEAGGVRAYLAQIGLTPAQIERLRARLRG
Ga0210409_1079530823300021559SoilRILEALRCPEEGAHNMLKFLENAGGVRAYLHEIGLSEAQIRALRMRLRS
Ga0210409_1093419313300021559SoilADADPQRILEALRCPEEGAHNMLKFLADAGGVRAYLGQIGLKEDEIERLRARLRT
Ga0210409_1093687123300021559SoilLRCPEEGAHNMLKFLADAGGVRAYLVQIGLNEDEIERLRARLRT
Ga0126371_1116200533300021560Tropical Forest SoilRIIEALRCPEIGAHNMLRFLEHSGGVRAYLSQLGLTAPQIDALRARLRA
Ga0126371_1290515123300021560Tropical Forest SoilEALRCPEAGAHNMLNFLKRAGGVRTYLRQIGLSEAEVSQLRARLRG
Ga0126371_1326007323300021560Tropical Forest SoilALNMLSFLERAGGVQAYLAQIGLTAEEIARLRARLRS
Ga0242660_124062813300022531SoilAYNMLKFLTHAGGVRAYLREIGLTRGEIATLHARLRE
Ga0207694_1097780513300025924Corn RhizosphereRCPEEGAYNMLKFLDDAGGVRAYLRQIGLTETQISALRSRLR
Ga0207687_1159066213300025927Miscanthus RhizosphereETVRCPEAGVHNMLRYLESHGGIRAYLGQIGLNEMEIVRLRARLRD
Ga0207664_1176495823300025929Agricultural SoilEGAHNMLSFLERAGGVRAYLTQIGLTETETLQLRARLRD
Ga0209471_128125313300026318SoilLEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRTRLRG
Ga0209059_100050413300026527SoilGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRTRLRG
Ga0209059_126124323300026527SoilGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRD
Ga0209474_1003168033300026550SoilILEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG
Ga0209577_1000312713300026552SoilLEALHCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRD
Ga0209729_105428213300027061Forest SoilEEGAYNMLKFLTHAGGVRAYLREIGLTRGEIATLHARLRE
Ga0209333_115149623300027676Forest SoilLRCPEQGAHNLLRFLKNEGGVGAYLRQIGLTRDEIARLRSRLRD
Ga0209626_100543933300027684Forest SoilGAHNMLKFLADAGGVRAYLAQIGLREDEIERLRARLRT
Ga0209626_114314113300027684Forest SoilGAHNMLKFLADAGGVRAYLAQIGLREDEIERLRARLRS
Ga0209060_1025130913300027826Surface SoilLHCPEEGAYNMLKFLAHAGGVRAYLGEIGLSRAEIAALRARLRE
Ga0209580_1061759423300027842Surface SoilLRCPVEGAYNMLAFLERVGGVRAYLAQIGLSADEIARLRARLRD
Ga0209698_1125817013300027911WatershedsNMLRFLEAAGGVRGYLRQIGLTAGEIGGLRARLRG
Ga0137415_1067621613300028536Vadose Zone SoilGAYNMLQFLAAAGGVRAYLAHIGLQQDEIERLRGRLR
Ga0318534_1005562123300031544SoilERERILDALRCPEEGAYNMLAFLERAGGVRAYLREIGLATEEIARLRARLRD
Ga0318571_1037563213300031549SoilAYNMLAFLERAGGVRAYLREIGLATEEIARLRARLRD
Ga0310686_11091551013300031708SoilPEEGAYNMLEFLSAAGGVRGYLERLGLLPEEIAALRARLRD
Ga0307469_1070389813300031720Hardwood Forest SoilAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRD
Ga0318493_1017482213300031723SoilLDALRCPEEGAYNMLAFLERAGGVRAYLREIGLATEEIARLRARLRD
Ga0318500_1000490563300031724SoilALRCPEEGAYNMLAFLERAGGVRAYLAQIGLTPYEIARLRERLRD
Ga0318500_1039253413300031724SoilYNMLAFLERAGGVRAYLAQIGLTPDQIALLRARLRD
Ga0318501_1048767513300031736SoilYNMLAFLERAGGVRAYLAQIGLTPYEIARLRERLRD
Ga0307468_10008857913300031740Hardwood Forest SoilPEEGAHNMLRFLARAGGVRAYLRQIGLTDAEIAQLRARLRG
Ga0306918_1020500913300031744SoilALRCPEEGAYNMLAFLERAGGVRTYLAQIGLSSQEIAQLRARLRD
Ga0307477_1006059343300031753Hardwood Forest SoilYSDSDPERILEALRCPEEGAHNMLRFLADAGGVRAYLGQIGLTEREIGRLRARLRG
Ga0307477_1097484123300031753Hardwood Forest SoilRERILEALRCPVEGAYNMLAFLERVGGVRAYLAQIGLSADDIARLRARLRD
Ga0318535_1037053413300031764SoilALRCPEQGAYNMLAFLERAGGVRAYLREIGLAAGEIARLRARLRD
Ga0318546_1027312933300031771SoilPEEGAYNMLAFLERAGGVRTYLAQIGLTSQEIAQLRARLRD
Ga0318543_1037011513300031777SoilAYNMLEFLERAGGVRTYLAQIGVSAEEIARLRARLRD
Ga0318566_1052744813300031779SoilRCPEQGAHNMLSFLERAGGVRSYLQQIGLTAEQIARLRARLRG
Ga0318547_1002439713300031781SoilLEALRCPEEGAYNMLAFLESAGGVRRYLAQIGLSSQEIAQLRARLRD
Ga0318547_1041480413300031781SoilALRCPEEGAYNMLAFLERAGGVRAYLAQIGLSPQEIERLRARLRD
Ga0318503_1017815213300031794SoilEALRCPEEGAYNMLTFLERAGGVRGYLTQIGLSSQQIAQLRARLRD
Ga0318550_1010685713300031797SoilLEALRCPAEGAYNMLAFLEGVGGVRGYLTQIGLSAAEIARLRARLRE
Ga0318550_1020701813300031797SoilERILDALRCPEEGAYNMLAFLERAGGVRAYLREIGLAAGEIARLRARLRD
Ga0318523_1037498313300031798SoilAHNMLRFLERAGGVRTYLAQIGLTPREIARLRARLRS
Ga0318568_1042755513300031819SoilERILEALRCPAEGAYNMLAFLEGVGGVRGYLTQIGLSAAEIARLRARLRE
Ga0318499_1020054713300031832SoilILEALRCPEEGAYNMLAFLERAGGVRGYLAQIGVSPPEIARLRARLRD
Ga0318511_1012571213300031845SoilRILEALRCPEEGAYNMLAFLERAGGVRAYLAQIGLTPYEIARLRERLRD
Ga0306925_1139764423300031890SoilDALRCPEEGAYNMLEFLERAGGVRTYLAQIGVSAEEIARLRARLRD
Ga0318520_1016380813300031897SoilRCPEEGAYNMLAFLERAGGVRTYLAQIGLTSQEIAQLRARLRD
Ga0318520_1082250913300031897SoilPEEGAYNMLAFLERAGGVRAYLAQIGLTPYETARLRERLRD
Ga0318520_1103369513300031897SoilRCPEEGAYNMLAFLERAGGVRAYLREIGLAAGEIARLRARLRD
Ga0310910_1076676713300031946SoilERERILDALRCPEEGAYNMLAFLERAGGVRGYLAQIGVSPPEIARLRARLRD
Ga0310909_1049766713300031947SoilILEALRCPAEGAYNMLAFLEGVGGVRGYLTQIGLSAAEIARLRARLRE
Ga0307479_1001344553300031962Hardwood Forest SoilLEALRCPEEGAYNMLQFLAAAGGVRAYLAHIGLQEDEIERLRGRLR
Ga0307479_1015353133300031962Hardwood Forest SoilLEALRCPEEGAHNMLRFLEGTGGVRAYLAQIGLSSQEIERLRARLRR
Ga0318569_1026162523300032010SoilILEALRCPEEGAYNMLAFLERAGGVRTYLAQIGLTSQEIAQLRARLRD
Ga0318549_1004101633300032041SoilARILEALRCPEEGAYNMLAFLERAGGVRGYLAQIGVSPPEIARLRARLRD
Ga0318504_1047744913300032063SoilPEEGAYNMLAFLERAGGVRAYLREIGLATEEIARLRARLRD
Ga0318514_1007911923300032066SoilALRCPEEGAYNMLAFLERAGGVRAYLREIGLATEEIARLRARLRD
Ga0318514_1058481813300032066SoilLEALRCPEEGAYNMLAFLERAGGVRAYLAQIGLSPQEIERLRARLRD
Ga0318524_1028240523300032067SoilHRALVLEALRCPEEGAYNMLAFLERAGGVRAYLAQIGLSPQEIERLRARLRD
Ga0318524_1028528913300032067SoilNMLAFLERAGGVRAYLAQIGLTPYETARLRERLRD
Ga0318524_1066225813300032067SoilPDEGAYNMLAFLERAGGVRAYLREIGLAAGEIARLRARLRD
Ga0307471_10334389723300032180Hardwood Forest SoilYSEADPQRVLEALRCPEEGAYNMLQFLAAAGGVRAYLAHIGLQHDEIERLRGRLR
Ga0335081_1032539623300032892SoilMPAARYAAVEPARILAALHCPEEGAHNMLKFLAQAGGARGDLRDIARTAAEIARLRARLR
Ga0335081_1084094613300032892SoilSANPARVLEALRCPQEGAYNMLKFLENAGGVREYLGQIGLSAPELEALRARLRDR
Ga0335073_1070231933300033134SoilDAEPARILAALRCPEEGVYNMLKFLAHAGGVRTYLRDIGLSAGEIGALRARLRE
Ga0314864_0117506_1_1713300033805PeatlandYADAEPARILDALRCPQEGAHNMLRFLESAGGVRSYLAQIGLTAAEIGRLRARLRD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.