Metagenome / Metatranscriptome Family F053894

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053894
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	92 residues
Representative Sequence	MKIRNRHERIITAPPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFELELAQGATVLRH
Number of Associated Samples	116
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.56 %
% of genes near scaffold ends (potentially truncated)	95.71 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	114
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.429 % of family members)
Environment Ontology (ENVO)	Unclassified (47.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (43.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.92% β-sheet: 29.41% Coil/Unstructured: 59.66%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.129.3.6: oligoketide cyclase/dehydrase-like	d3tvqa_	3tvq	0.68002
d.129.3.6: oligoketide cyclase/dehydrase-like	d2d4ra1	2d4r	0.67847
d.129.3.6: oligoketide cyclase/dehydrase-like	d1t17a_	1t17	0.64813
d.129.3.8: Atu1531-like	d3f08a_	3f08	0.64764
d.129.3.0: automated matches	d2le1a1	2le1	0.64726

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00440	TetR_N	25.00
PF12680	SnoaL_2	7.86
PF00392	GntR	5.00
PF07366	SnoaL	2.14
PF10825	DUF2752	2.14
PF00106	adh_short	1.43
PF12697	Abhydrolase_6	1.43
PF02627	CMD	0.71
PF07690	MFS_1	0.71
PF00227	Proteasome	0.71
PF02538	Hydantoinase_B	0.71
PF04264	YceI	0.71
PF03009	GDPD	0.71
PF08327	AHSA1	0.71
PF04185	Phosphoesterase	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.43
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	0.71
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.71
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.71
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.71
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.71
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.71 %
Unclassified	root	N/A	35.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.00 %
Unclassified	root	N/A	35.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.00 %
Unclassified	root	N/A	35.00 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.86 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.29 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	4.29 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.14 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4.29 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.29 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.43 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.71 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.14 %
Iamia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia	0.71 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.71 %
Kibdelosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium	0.71 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.71 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	3.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.71 %
unclassified Iamia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia	0.71 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.71 %
Nonomuraea candida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	0.71 %
Streptosporangium canum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium canum	0.71 %
Streptomyces novaecaesareae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces novaecaesareae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	3.57 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.86 %
Iamia sp. SCSIO 61187	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	0.71 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.71 %
Kibdelosporangium aridum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	0.71 %
Nonomuraea candida	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	0.71 %
Streptosporangium canum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium canum	0.71 %
Streptomyces novaecaesareae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces novaecaesareae	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12297867	Not Available	511	Open in IMG/M
3300000956\|JGI10216J12902_117023376	Not Available	555	Open in IMG/M
3300002917\|JGI25616J43925_10065185	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300004082\|Ga0062384_100846208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300004152\|Ga0062386_100062279	All Organisms → cellular organisms → Bacteria	2824	Open in IMG/M
3300005167\|Ga0066672_10329511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300005435\|Ga0070714_101819759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300005445\|Ga0070708_100134292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2291	Open in IMG/M
3300005518\|Ga0070699_100390801	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300005553\|Ga0066695_10797829	Not Available	545	Open in IMG/M
3300005713\|Ga0066905_102339305	Not Available	500	Open in IMG/M
3300006804\|Ga0079221_10509958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	783	Open in IMG/M
3300009088\|Ga0099830_11427369	Not Available	576	Open in IMG/M
3300009089\|Ga0099828_10961736	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300009143\|Ga0099792_10365640	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300010043\|Ga0126380_10863618	Not Available	747	Open in IMG/M
3300010048\|Ga0126373_11718745	Not Available	691	Open in IMG/M
3300010048\|Ga0126373_12685014	Not Available	556	Open in IMG/M
3300010358\|Ga0126370_12088587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300010359\|Ga0126376_12478871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300010359\|Ga0126376_13269210	Not Available	501	Open in IMG/M
3300010360\|Ga0126372_10888374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	892	Open in IMG/M
3300010360\|Ga0126372_12857382	Not Available	535	Open in IMG/M
3300010361\|Ga0126378_11702744	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300010361\|Ga0126378_11904299	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300010361\|Ga0126378_12751650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Iamia → unclassified Iamia → Iamia sp. SCSIO 61187	562	Open in IMG/M
3300010366\|Ga0126379_12956835	Not Available	569	Open in IMG/M
3300010366\|Ga0126379_13480529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300010371\|Ga0134125_12699047	Not Available	540	Open in IMG/M
3300010376\|Ga0126381_101744882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	899	Open in IMG/M
3300010376\|Ga0126381_102609837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300010876\|Ga0126361_10451958	Not Available	681	Open in IMG/M
3300012202\|Ga0137363_10599869	Not Available	929	Open in IMG/M
3300012204\|Ga0137374_10050215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4305	Open in IMG/M
3300012210\|Ga0137378_10382914	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300012353\|Ga0137367_10591063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300016270\|Ga0182036_10119878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1824	Open in IMG/M
3300016294\|Ga0182041_12011539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300016294\|Ga0182041_12170669	Not Available	519	Open in IMG/M
3300016341\|Ga0182035_11955792	Not Available	532	Open in IMG/M
3300016357\|Ga0182032_11409276	Not Available	603	Open in IMG/M
3300016371\|Ga0182034_10589855	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300016371\|Ga0182034_11801413	Not Available	539	Open in IMG/M
3300017823\|Ga0187818_10479427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300017937\|Ga0187809_10075122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1110	Open in IMG/M
3300017993\|Ga0187823_10389923	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300017994\|Ga0187822_10203311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300017995\|Ga0187816_10095965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1270	Open in IMG/M
3300018001\|Ga0187815_10337015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300018090\|Ga0187770_10614669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	864	Open in IMG/M
3300020580\|Ga0210403_10529640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300020581\|Ga0210399_10016515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5822	Open in IMG/M
3300020583\|Ga0210401_10266460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1572	Open in IMG/M
3300020583\|Ga0210401_10510155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1065	Open in IMG/M
3300021088\|Ga0210404_10481561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	700	Open in IMG/M
3300021170\|Ga0210400_10206607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1598	Open in IMG/M
3300021432\|Ga0210384_11147553	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300021478\|Ga0210402_10818260	Not Available	857	Open in IMG/M
3300021479\|Ga0210410_10466106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300021560\|Ga0126371_12980607	Not Available	573	Open in IMG/M
3300025885\|Ga0207653_10144009	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300025905\|Ga0207685_10139920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300025928\|Ga0207700_10542980	Not Available	1031	Open in IMG/M
3300025928\|Ga0207700_10817881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	833	Open in IMG/M
3300026374\|Ga0257146_1071763	Not Available	563	Open in IMG/M
3300026475\|Ga0257147_1059664	Not Available	576	Open in IMG/M
3300027110\|Ga0208488_1034895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea candida	916	Open in IMG/M
3300027824\|Ga0209040_10011054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6261	Open in IMG/M
3300027853\|Ga0209274_10053664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1917	Open in IMG/M
3300027862\|Ga0209701_10533366	Not Available	633	Open in IMG/M
3300027867\|Ga0209167_10692310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300027884\|Ga0209275_10541615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300030618\|Ga0311354_11522363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kibdelosporangium → Kibdelosporangium aridum	591	Open in IMG/M
3300030814\|Ga0265741_117023	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031543\|Ga0318516_10019849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3417	Open in IMG/M
3300031543\|Ga0318516_10351827	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300031572\|Ga0318515_10360076	Not Available	780	Open in IMG/M
3300031573\|Ga0310915_10317475	Not Available	1102	Open in IMG/M
3300031640\|Ga0318555_10716104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	541	Open in IMG/M
3300031682\|Ga0318560_10222870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1010	Open in IMG/M
3300031715\|Ga0307476_10537621	Not Available	866	Open in IMG/M
3300031723\|Ga0318493_10614390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300031724\|Ga0318500_10219253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	916	Open in IMG/M
3300031736\|Ga0318501_10493239	Not Available	667	Open in IMG/M
3300031747\|Ga0318502_10805675	Not Available	569	Open in IMG/M
3300031748\|Ga0318492_10520450	Not Available	632	Open in IMG/M
3300031751\|Ga0318494_10424623	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031764\|Ga0318535_10067139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1528	Open in IMG/M
3300031765\|Ga0318554_10473506	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300031768\|Ga0318509_10840805	Not Available	507	Open in IMG/M
3300031769\|Ga0318526_10343900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces novaecaesareae	610	Open in IMG/M
3300031771\|Ga0318546_11164150	Not Available	542	Open in IMG/M
3300031777\|Ga0318543_10518072	Not Available	534	Open in IMG/M
3300031781\|Ga0318547_10652642	Not Available	653	Open in IMG/M
3300031782\|Ga0318552_10345171	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031782\|Ga0318552_10603387	Not Available	560	Open in IMG/M
3300031793\|Ga0318548_10248109	Not Available	875	Open in IMG/M
3300031793\|Ga0318548_10426153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300031805\|Ga0318497_10249508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300031819\|Ga0318568_10195828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300031819\|Ga0318568_10536843	Not Available	729	Open in IMG/M
3300031821\|Ga0318567_10053639	All Organisms → cellular organisms → Bacteria	2090	Open in IMG/M
3300031835\|Ga0318517_10197883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	905	Open in IMG/M
3300031846\|Ga0318512_10068995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1613	Open in IMG/M
3300031880\|Ga0318544_10426288	Not Available	516	Open in IMG/M
3300031894\|Ga0318522_10407505	Not Available	515	Open in IMG/M
3300031896\|Ga0318551_10697271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300031896\|Ga0318551_10710684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300031910\|Ga0306923_10323167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1761	Open in IMG/M
3300031912\|Ga0306921_10273211	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300031912\|Ga0306921_12554801	Not Available	529	Open in IMG/M
3300031942\|Ga0310916_11264263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	608	Open in IMG/M
3300031947\|Ga0310909_11139194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300031959\|Ga0318530_10276640	Not Available	693	Open in IMG/M
3300031996\|Ga0308176_12335783	Not Available	571	Open in IMG/M
3300032001\|Ga0306922_12094452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium canum	548	Open in IMG/M
3300032001\|Ga0306922_12301723	Not Available	517	Open in IMG/M
3300032009\|Ga0318563_10774570	Not Available	514	Open in IMG/M
3300032010\|Ga0318569_10273357	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300032035\|Ga0310911_10715779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300032043\|Ga0318556_10382502	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300032044\|Ga0318558_10299784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300032052\|Ga0318506_10067851	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1476	Open in IMG/M
3300032052\|Ga0318506_10129203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1097	Open in IMG/M
3300032054\|Ga0318570_10423933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	607	Open in IMG/M
3300032055\|Ga0318575_10332629	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300032059\|Ga0318533_10487697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300032059\|Ga0318533_10600151	Not Available	808	Open in IMG/M
3300032060\|Ga0318505_10360029	Not Available	687	Open in IMG/M
3300032066\|Ga0318514_10129551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1298	Open in IMG/M
3300032066\|Ga0318514_10223567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300032068\|Ga0318553_10421027	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300032091\|Ga0318577_10135241	Not Available	1169	Open in IMG/M
3300032091\|Ga0318577_10469902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300032898\|Ga0335072_10223004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2202	Open in IMG/M
3300032898\|Ga0335072_11240973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	658	Open in IMG/M
3300033158\|Ga0335077_10134390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2859	Open in IMG/M
3300033290\|Ga0318519_10700630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300034124\|Ga0370483_0061579	Not Available	1197	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.57%
Aquatic	Environmental → Aquatic	6.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Freshwater	Environmental → Aquatic → Freshwater	6.43%
Peat	Environmental → Terrestrial → Peat	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.43%
Loam	Environmental → Terrestrial → Soil → Loam	7.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.71%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_122978671	3300000789	Soil	MKIRNCHERIVAAPPERIAALIADFDRIWPTQIAPAPRLHGHRLYDAGPMLWEEFDRPGAARAFRVVRPDGLQGEHWFELELAEGATILRHTIEGSASGKYEAIW
JGI10216J12902_1170233762	3300000956	Soil	MKIRNRHERIVAAPPARIAALIADFDRVWPTKLAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRMVRPDGLQGEHWFELE
JGI25616J43925_100651854	3300002917	Grasslands Soil	MKISNRHERIVAATPEGVAAIVADFDGIWPTQIAPAPRGQEGRLYDTGLMVWEEFDRPGAARAFRVVSPEWLQVEHWFELERVDGGTLLRHRLEGQVLG
Ga0062384_1008462081	3300004082	Bog Forest Soil	MKIMNRHERILMAPPERIAPLIADFDRIWPTEFQPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRTIRPDELRVEHWFEVESAAGATVLRHT
Ga0062386_1000622793	3300004152	Bog Forest Soil	MIKNRHERIIAAAPERIAALIWDFDRIWPTQIAPAPRRHGDHLYDAGLMLWKEYDRPGAARAFRVAKPDELQGEHWFELRAAPGGTVVRHTLRGCAAGKY*
Ga0066672_103295112	3300005167	Soil	MKIRNRHERIVAAPPERIATLIADFDRIWPTQIAPAPRLHGHRLYDAGPMLWEEFDRPDAARAFRVIRPDGLQGEHWFELGSAEGATVLRHTLKGR
Ga0070714_1018197591	3300005435	Agricultural Soil	MKITNRHERILMAPPERIAPLIADFGRIWPTEIGPPPRLVEGRLYEAGRMLWEEIDRPGALRAFRVIRPDELRLEHWFEAEPAAGGTVLRHTVEGYADG
Ga0070708_1001342921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKIKNRHERVVAAPPERIAALIADFDRIWPTQIAPAPRRHGHRLYDARPMLWEEFDRPGAARAFRVVRPDELHGEHWFELELGEDATVVRHTLEGGRAVRGDLA*
Ga0070699_1003908014	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKITNRHERIVAAPPEQIAALIADFGRVWPTQIAPAPLRQGHRLYDVGLMLWEQFDRPGAARAFRVVRPAELQAEHWFELELAEG
Ga0066695_107978291	3300005553	Soil	MKIRNCHERIVAAPPERIATLIADFGRIWPTQIAPAPRLHGHRLYDAGPMLWEEFDRPDAARAFRVIRPDGLQGEHWFELGSAEGATVLRHTL
Ga0066905_1023393052	3300005713	Tropical Forest Soil	MEISNHHERFVAATPERVAAAIADFDAIWPTQIAPAPRQLKRCLYDAGPMLWEEVDRPGAARAFRVIWPEWLQGEHWFELESV
Ga0079221_105099582	3300006804	Agricultural Soil	MKITNCHERILMAPPERIAPLIADFDRIWPTEIGPAPRLVDDRLYEAGRMLWEEFDRPGALRAFRVVRPDELRLEHWFEAESAAGGTVLRHTVDG
Ga0099830_114273692	3300009088	Vadose Zone Soil	MKIRKCHERIIAAPPERIAALIADFDRVWPTEIAPAPRLQGHRLYDAGPMLWEEFDRPGTARAFRVVRPDELQLEHWFELELAEGATVV
Ga0099828_109617361	3300009089	Vadose Zone Soil	MKIKNRHERVVAAPPERIAALIADFDRVWPTQIAPAPRRHGHRLYDAGPMLWEEFDRPGAERAFRVVRPDELHGEHWFELEPAEDATVVRHT
Ga0099792_103656403	3300009143	Vadose Zone Soil	MKIKNRHERVVAAPPERIADLIADFDRVWPTQIAPAPRRHGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELHGEHWFELEPAEEATVVRHTLEGRA
Ga0126380_108636181	3300010043	Tropical Forest Soil	VKIRNRHERIVAAPPERIAALIADFDRVWPAEIAPAPRRQGQRWYDAGLMLWEQFDRPGAARAFRVVRPDELRAEHWFELEPTDGATVLRHTIEGSA
Ga0126373_115301932	3300010048	Tropical Forest Soil	MKISNRHERIVPATPERVAAIVADFDRIWPTQIAPAPRGQGRRLYDTGRMLWEESNRPGATRAFRVISPEGLQVEHWFELERVDGGTLLRHTVEGQALG
Ga0126373_117187451	3300010048	Tropical Forest Soil	MKIRNRHERIVTAPPERIAALIADLDRIWPRQIAPAPRLRGHRLYDAGLMVWEEFDRPGAARAFRVVRPEGLHGEHWFELESAQGVTVLRHTIEGYATGTYEAIWR
Ga0126373_126850141	3300010048	Tropical Forest Soil	MEISNHHERFVAATPERVAAAIADFDAIWPTQIAPEPRQLKRCLYDAGPMLWEEVDRPGAARAFRVIWPGWLQGENWFELELVDGG
Ga0126370_120885871	3300010358	Tropical Forest Soil	MKIRNHHQRTVAAPPEQIAALIADFGRVWPTQIAPAPQLQGHRLYDAGLMFWEEFDRPGAARAFRVVRPDELQGEHWFELEPAQGATVLRHTIEAS
Ga0126376_124788711	3300010359	Tropical Forest Soil	MKIKNHHERTVPAPPEQIAALIADFDRIWPTQIAPAPRPQGHHLYDAGLMLWEEVDRPGTARAFRVVRPAELQGEQWFELERADDATVLRHTVAHLVPRDWPHLLAGFVEH
Ga0126376_132692101	3300010359	Tropical Forest Soil	MKIRNRHERIVAALPERVAAFIADFDHIWPRQIAPVPRLCGHRLYDAGLMLWEEFDRPGAVRAFRVVRPDELQGEHWFELGFAEGATILRHTLEGCAAGKYE
Ga0126372_108883742	3300010360	Tropical Forest Soil	MKIRNRHERIVAAPPERIAALIADFDRVWPTEVAPAPRRQGPRLYDAGLMAWEEFDRPAAARAFRVVRPDELQAEHWFELELADGGTVLRHTVEGSAAGRYEA
Ga0126372_128573822	3300010360	Tropical Forest Soil	MKIRNCHERIVAGEEERIVALIADFDRIWPTEIAPAPRLQGPRLYDAGLMLWEECDRPGAARAFRVVKPDALQAEHWFELEPANGATLVRHTVEGC
Ga0126378_117027441	3300010361	Tropical Forest Soil	MKIKNHHERTVPAPPEQIAALIADFGRIWPAQIAPAPRPQGHRLYDAGLMLWEEVDRPGTARAFRVVRPTELQGEQWFELE
Ga0126378_119042991	3300010361	Tropical Forest Soil	MKIRNHHQRTVTAPPEQIAALIADFGRVWPTQIAPAPQLQGHRLYDAGLMFWEEFDRPGAARAFRVVRPDELQGEHWFELEPAQGATVLRHTIE
Ga0126378_127516501	3300010361	Tropical Forest Soil	MKIRKLHERIVAAPPVRIAALIADFDRIWPTEVAPAPLPHGHRLFDAGLMLWEEFDQPGAARAFRVFRPDELQGEHWFELELTEGATVVRHT
Ga0126379_129568351	3300010366	Tropical Forest Soil	MKIRNRHERIVTAPPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMRWEEFDRPGAARAFRVVRPDELQGEHWFELELAQGVT
Ga0126379_134805292	3300010366	Tropical Forest Soil	MKIRNRHERIIAAPPEQITDLVADFDRIWPTQIAPAPRRLGHRFYDAAPMLWEEFDRPGAVRAFRVIRPDELQGEHWFELELAESATVLH
Ga0134125_126990471	3300010371	Terrestrial Soil	MKIRKCHERIIAAPPERIVPLIADFDRVWPTEIAPAPRPQGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELQLEHWFELELAEGATVV
Ga0126381_1017448821	3300010376	Tropical Forest Soil	MKIRNRHERTVAAPAERIAALIADFGLIWPVQIAPAPRRQGQSLYDAGLMTWEEFDRPGAARAFRVVRPDELRAEHWFELEPAGSATVLRHT
Ga0126381_1026098371	3300010376	Tropical Forest Soil	VSLMQVTNRHERVLKAPPEVVAPLIADFDRIWPTEMGPAPRLVGDRLYEAGRMLWREFDRPGAMRAFRVVKPDELRLEHWFEAESAAGGTLLRHTVQGDAVG
Ga0126361_104519581	3300010876	Boreal Forest Soil	VKILNRHERMIAAPPERIAALVADFGLIWPAQIAPMPRRQGDRRYDTGLMLWRETERPGAVRAFLVLSPDELQAGHWFE
Ga0137363_105998691	3300012202	Vadose Zone Soil	MKIKNRHERVVAAPPERIAALIADFDRVWPTQIAPAPRRHGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELHGEHWFELEPGEDASCSPYARGPRGRAVRGDLA*
Ga0137374_100502154	3300012204	Vadose Zone Soil	MRIRNRHERIIAAPPERITALIADFDRVWPTEIAPAPRRQGHRLYDAGLMLWEEFDRPGAARAFRVVRPDGLQGEHWFELELAGDTTVLRYT
Ga0137378_103829143	3300012210	Vadose Zone Soil	MKITNRHERIVAAPPEQIAALIADFGRVWPTEIAPAPLRQGHRLYDVGLMLWEELFDRPGAARVFRVVRPAELQAEHWFELELAEGSTVVRHVIKGCTAGKY
Ga0137367_105910632	3300012353	Vadose Zone Soil	MKIRNRHERIVAAPPERIATLIADFDRIWPTQIAPAPRLHGHRLYDAGPMLWEEFDRPDAARAFRVIRPDGLRGEHWFELGVAEGATVLRHTLEG
Ga0182036_101198784	3300016270	Soil	MWVRMMIRNRHERTVAASPEEAAALIADFDLVWPTQFGPAPRRQGQRLYEAGLFLWEEFDRPGAARAFRVVRPDEMQAEHWFETERA
Ga0182041_120115392	3300016294	Soil	MKVRQLHERIVAAPPARIAALIADFDRIWPTEIAPAPRPQGHRLFDAGLMLWEEFDRPGAARAFRVVSPPELQGENWFELEHARGHLAVLLPGPGARR
Ga0182041_121706692	3300016294	Soil	MEIRNHHERLVAAPPGQIAALIADFDRVWPAQITPAPRWLRHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELE
Ga0182035_119557921	3300016341	Soil	MKIRNHHQRIVAALPGQIAALIADFGRVWPTQIAPAPRWLGHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATVLHHTL
Ga0182032_114092761	3300016357	Soil	MEIRNHHERLVAAPPGQIAALIADFDRVWPAQITPAPRWLRHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELERAESATVLHHTLEGCAAGKYEAI
Ga0182034_105898551	3300016371	Soil	MKIRNHHQRIVAALPGQIAALIADFGRVWPTQIAPAPRWLGHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATVLHHT
Ga0182034_118014132	3300016371	Soil	MKIRKRHERSIAAPPERIAALIADFDRVWPAQVAPAPRRQGHRYDAGLMLWEEFDRPGAVRAFRVVSPDELQGEHWFELEPAE
Ga0187818_104794272	3300017823	Freshwater Sediment	MAPPERIAPLIADFDRIWPAEIEPAPRLVGDRLYEAGWMLWEEFDRPGALRAFRVIRPDELRVEHWFEVESAAGATVLRHTVEGYADGRYEALWR
Ga0187809_100751223	3300017937	Freshwater Sediment	MKIVNRHERVIPAGTERIAPLIADFDRTWPTEIAPAPRLVGDRRYEAGRMLWEEVDRPGALRAFRVLSPAELRLEHWFE
Ga0187823_103899232	3300017993	Freshwater Sediment	MKITNCHERILMAPPERIAPLIADFDRIWPTEIGPPPRLVEDRLYEAGRMLWEEFDRPGALRAFRVVRPDELRLEHWFEAEPAAGG
Ga0187822_102033111	3300017994	Freshwater Sediment	MKITNCHERILMAPPERIAPLIADFDRIWPTDIGPAPRRVEDRLYEAGRMLWEEFDRPGALRAFRVVRPDELRLEHWFEAESAAGGTVLR
Ga0187816_100959651	3300017995	Freshwater Sediment	MKITNRHERILMAPPERIAPLIADFDRIWPAEIEPAPRLVGDRLYEAGWMLWEEFDRPGALRAFRVIRPDELRVEHWFE
Ga0187815_103370152	3300018001	Freshwater Sediment	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRVIRPDELRVEHWFEVESAAGATVLRHTVDG
Ga0187770_106146692	3300018090	Tropical Peatland	MQIRNRHQRTIAAPPERIAELIADFDRVWPNDITSAPSKQGHRIYDAWPMRWEEVERPGAARAFRVIAPDEIQAEHWFELEPAHGATVLRHVIEGN
Ga0210403_105296401	3300020580	Soil	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPPPRLVEDRLYEAGRMLWQEFDRPGALRAFRVIRPDEMRLDHWFEAEPAAGGTVL
Ga0210399_100165151	3300020581	Soil	MKIMNRHERILMAPPERIAPLIADFDRIWPTEFQPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRTIRPDELRVEHWFEVESAAGATVLRHTVEGYAVGRYEA
Ga0210401_102664603	3300020583	Soil	MKIMNRHERILMAPPERIAPLIADFDRIWPTEFQPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRTVKPDELRVEHWFEVESAA
Ga0210401_105101551	3300020583	Soil	MKITNCHERILMAPPERIAPLIADFDRIWPTEIGPAPRLVEDRLYEAGRMLWEEFDRPGAMRAFRVVRPDELRLEHWF
Ga0210404_104815612	3300021088	Soil	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPPPRLVEDRLYEAGRMLWQEFDRPGALRAFRVVRPDELRLEHWFEAEPA
Ga0210400_102066071	3300021170	Soil	MKIMNRHERILMAPPERIAPLIADFDRIWPTEFQPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRTIRPDELRVEHWFEVESAVGATVLRH
Ga0210384_111475531	3300021432	Soil	MKVKNVHERTVAAPPGRIAALIADFGRIWPTQFGPAPRPRGNRTYQAGFMIWEEFDRPGATRAFRVLEPAGLRLEHWFELEPA
Ga0210402_108182601	3300021478	Soil	MKIRKCHERIIAAPPERIVPLIADFDRVWPTEIAPAPRLQGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELQLEHWFELELVEGGTVLRHTLEGCAVGKYEAI
Ga0210410_104661063	3300021479	Soil	MKIMNRHERILMAPPERIARLIADFDRIWPTEFEPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRVIRPGELRVEHWFEVESAAGATVLRHTVEGCAAGRYEA
Ga0126371_129806072	3300021560	Tropical Forest Soil	MKISNRHERTIAAAPQRIAALIADFDRVWPTQIAPAPVRQGHRLYDAEPMLWEEFDRPGAARAFRVVRPDELQLEHWFELELADGATVLRH
Ga0207653_101440091	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MKITNRHERIVAAPPEQIAALIADFGRVWPTQIAPAPLRQGHRLYDVGLMLWEQFDRPGAARAFRVVRPAELQAEHWFELELAEGSTVVRHVIEG
Ga0207685_101399203	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKITNCHERILMAPPERIAPLIADFDRIWPTEIGPAPRLVEDRLYEAGRMLWEEFDRLGALRAFRVVRPDELRLEHWFEAES
Ga0207700_105429801	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRKCHERIIAAPPERIVPLIADFDRVWPTEIAPAPRLQGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELQLEHWFELELAEGGTVLFTSTE
Ga0207700_108178811	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MEIRNRHERIVAAPPERIAALIADFDRIWPTQIAPAPRLHGHRLYDAGPMLWEEFDRPDAARAFRVIRPDGLRVEHWFELGV
Ga0257146_10717632	3300026374	Soil	MKIKNRHERVVAAPPERIAALIADFDRVWPTQIAPAPRRHGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELHGEHWFELELGEDVTV
Ga0257147_10596641	3300026475	Soil	MKIKNRHERVVAAPPERIAALIADFDRVWPTQIAPAPRRHGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELHGEHWFELEPGEDATVVR
Ga0208488_10348951	3300027110	Forest Soil	MKIRNLHERAVGAPPGRIAPLIADFDCIWPTQIASAPRRQDDGTYKAGLMTWEEFDRPGATRAFRVVEPGEIQLEHWFELEPAAGATLVRHTVEGRVLGQYEAI
Ga0209040_100110544	3300027824	Bog Forest Soil	MMIKNRHERIIAAAPERIAALIWDFDRIWPTQIAPAPRRHGDHLYDAGLMLWKEYDRPGAARAFRVAKPDELQGEHWFELRAAPGGTVVRHTLRGCAAGKY
Ga0209274_100536643	3300027853	Soil	MKIMNRHERILMAPPERIAPLIADFDRIWPTEFQPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRTIKPDELRVEHWFEVESAAGATVLRHTVEGYAVGRYETLWR
Ga0209701_105333661	3300027862	Vadose Zone Soil	MKIRKCHERIIAAPPERIAALIADFDRVWPTEIAPAPRLQGHRLYDAGPMLWEEFDRPGAARAFRVVRPDELQAEHWFELEFAEGATILRHTIQGSAV
Ga0209167_106923101	3300027867	Surface Soil	MRIRNEHERTVAAPPERIAELIADFGRIWPTHITPAPRRQEDGLYHAGLMLWEEIDRPGAARAFRVVAPDEIRAEHWFEVAPADDGAVL
Ga0209275_105416152	3300027884	Soil	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPPPRLVEDRLYEAGRMLWQEFDRPGALRAFRVIRPDEMRLEHWFEAEPAVGGT
Ga0311354_115223631	3300030618	Palsa	MQIRHQHERIVAAAPERISELIADFDRIWPTQIAPAPRALGPGTYDAGIMVWEEFDRPGAARAFRVTRPDELRAKHWFELRPADGAVLVRH
Ga0265741_1170231	3300030814	Soil	MKITNRHERILMAPPERIAPLIADFDRTWPTEIGPPPRLVEDRLYEAGRMLWQEFDRPGALRAFRVIRPDEMRLEHWFEAEPAAGGTVLRHTVEGYAD
Ga0318516_100198491	3300031543	Soil	VQIRNRHERIVAAAPERVAALIADFDRVWPTEIAPAPRRRGPRLYDVGLMLWEEFDRPAAMRAFRVVRPDELRAEHWFELELADGGTVLRHTIEGSATGRYEAIWR
Ga0318516_103518272	3300031543	Soil	MKIRNHHQRTVAAPPERIAALLADFGRVWPTQIAPAPQRQGHRLYDAGLMFWEEFDRPGAARAFRVVRPDELQGEHWFELE
Ga0318515_103600761	3300031572	Soil	MKIRNRHERIVTAPPERIAAFIADLDRIWPRQIAPPPRLHGHRLYDAGLMLWEEFDRPGAARAFRVIRPEGLQGEHWFELELAHGATLLRHTIEGYATGTYEA
Ga0310915_103174752	3300031573	Soil	MKIKNRHQRTVAAPPERITALIADFDRVWPTQIAPAPRLRGHRLYDAGPMLWEEFDRPGAARAFRLVRPDELHGEHWFELELAEHAT
Ga0318555_107161041	3300031640	Soil	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPSPRLVEGGLYEAGRMLWKEYDRPGALRAFRVIRPDELRLEHWFEAEPAAGGTVLRH
Ga0318560_102228703	3300031682	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVRDHVYQAGWMLWEEFDRPGALRAFRVIKPDELQVEHWF
Ga0307476_105376211	3300031715	Hardwood Forest Soil	VGEWLLKISNRHERTFTAPPEQIAGVIADFGRVWPTQLAAAPRVQGHRLYDAELMLWKEFDRPDATRAFRVVKPDELKAEHWFELEPAAGATVLR
Ga0318493_106143902	3300031723	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVGDRLYEAGWMLWEEFDRPGSLRAFRVVKPDELRVEHWFEVESAPGATVLRHTVEG
Ga0318500_102192532	3300031724	Soil	VQIRDRHERIVAAAPERVAALIADFDRVWPTEIAPAPRRRGPRLYDVGLMLWEEFDRPAAMRAFRVVRPDELRAEHWFELELADGETVL
Ga0318501_104932391	3300031736	Soil	MKIRNRHERIVTAPPERIAALIADFDRIWPRQIAPTPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELEGEHWFELE
Ga0318502_108056751	3300031747	Soil	MKIRNRHERIITASPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFELELAQG
Ga0318492_105204501	3300031748	Soil	MKIRNRHERIIVAPPERVAALIADFDRIWPRQIAPAPRRHGHRSYEAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFEVGLADGATVLRHT
Ga0318494_104246231	3300031751	Soil	MKIRNHHQRIVAAPPGQIAALVADFGRVWPTQIAPAPRRLGHRLYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATV
Ga0318535_100671393	3300031764	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVGDRLYEAGWMLWEEFDRPGSLRAFRVVKPDELRVEHWFEVESAPGATVLRHTVEGYAVGRYE
Ga0318554_104735063	3300031765	Soil	MKIRERHERSIAAPPERIAALIADFDRVWPAQVAPAPRRQGHRYDAGLMLWEEFDRPGAVRAFRVVSPDELQGEHWFELEPAEGATVLRH
Ga0318509_108408051	3300031768	Soil	MKIRNHHERIVAAPPGQIAALIADFDRVWPTQIAPAPRRLGHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATVLH
Ga0318526_103439001	3300031769	Soil	MKIRNRHERIITAPPERIAALIADFDRIWPRQIAPAPRPHGHRLYDAGLMGWEEFDRPGAARAFRVVRPEGLQGEHWFELEPAQGATVLRHTIEGDAT
Ga0318546_111641501	3300031771	Soil	MKIRNHHERIVAAPPGQIAALIADFDRVWPTQIAPAPRRLGHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATVLHHTLEGCAAGKYEAIWCE
Ga0318543_105180722	3300031777	Soil	MKIRNRHERIVTAPPERIAAFIADLDRIWPRQIAPPPRLHGHRLYDAGLMLWEEFDRPGAARAFRVIRPEGLQGEHWFELELAHGATLLRHTIEG
Ga0318547_106526421	3300031781	Soil	MKIRNRHERIVTAPPERIAALIADFDRIWPRQIAPVPRLHGHRLYDAGLMRWEEFDRPGAARAFRVVRPEELQGEHWFELELTQG
Ga0318552_103451711	3300031782	Soil	MKIRNHHERIVAAPPGQIAALIADFGRIWPTQIAPAPRRLGHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATVLHHTLEG
Ga0318552_106033871	3300031782	Soil	MKIRNRHERIVTAPPERIAAFIADLDRIWPRQIAPPPRLHGHRLYDAGLMLWEEFDRPGAARAFRVIRPEGLQGEHWFELELAH
Ga0318548_102481092	3300031793	Soil	MKIRNRHERIITASPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFELELA
Ga0318548_104261532	3300031793	Soil	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPPPRRVEDGLYEAGRMLWKEYDRPGALRAFRVIRPDELRLEHWFEAEPAAGGTVLRHTVEG
Ga0318497_102495081	3300031805	Soil	MKIRNRHERIITAPPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFELELAQGATVLRH
Ga0318568_101958281	3300031819	Soil	MKITNRHERILTAPAERIAPLIADFDCIWPTEIGPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRVVKPDELQVEHWFE
Ga0318568_105368431	3300031819	Soil	MKIRNRHERIIVAPPERVAALIADFDRIWPRQIAPAPRRHGHRSYEAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFEVEFA
Ga0318567_100536391	3300031821	Soil	MEIRNHHERLVAAPPGQIAALIADFDRVWPAQITPAPRWLRHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELERAESATVLHHTLEGCAAGKYEAIWC
Ga0318517_101978831	3300031835	Soil	VQIRDRHERIVAAAPERVAALIADFDRVWPTEIAPAPRRRGPRLYDVGLMLWEEFDRPAAMRAFRVVRPDELRAEHWFELEPAVGATILRHTIEGCAAGKYEAI
Ga0318512_100689954	3300031846	Soil	MWVRMMIRNRHERTVAASPEEAAALIADFDLVWPTQFGPAPRRQGQRLYEAGLFLWEEFDRPGAARAFRVVRPDEMQAEHWFETERAGGTTVLRHTVEGRA
Ga0318544_104262881	3300031880	Soil	MKITNRHERIIAATPERIAALVADFDRIWPTQITPAPRLHGHRLYDAGLMLWEEYDRPGAARAFRVTRPAELQGEHWFELGVAQGRTILR
Ga0318522_104075052	3300031894	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVRDHVYQAGWMLWEEFDRPGALRAFRVIKPDELQVEHWFEVESAAGATVLRHTVEGYAVGRYEV
Ga0318551_106972711	3300031896	Soil	MKITNRHERILMAPPERIAPLIADFDRIWPTEIGPPPRRVEDGLYEAGRMLWKEYDRPGALRAFRVIRPDELRLEHWFEAESA
Ga0318551_107106841	3300031896	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVRDHVYQAGWMLWEEFDRPGALRAFRVIKPDELQVEHWFEVESAAGATVLRHTVEGYAVGRYEVL
Ga0306923_103231674	3300031910	Soil	MWVRMMIRNRHERTVAASPEETAALIADFDLVWPTQFGPAPRRQGQRLYEAGLFLWEEFDRPGAARAFRVVRPDEMQAEHWFETERAGGTTVLRHTVEG
Ga0306921_102732111	3300031912	Soil	MKIRNRHERIVTAPPERIAALIADFDRIWPRQIAPTPRLHGHRLYDAGLMLWEEFDRPGAARAFRVIRPEGLQGEHWFELELAHGATLLRHTIEGYATGTY
Ga0306921_125548011	3300031912	Soil	MKIRNRHERIVTAPPERIAALIADLDRIWPRQIAPAPRLHGYRLYDAGLMTWEEFDRPGAARAFRVVRPEGLQGEHWFELESAQGATVLRHTIEGYA
Ga0310916_112642632	3300031942	Soil	VQIRNRHERIVAAAPERVAALIADFDRVWPTEIAPAPRRRGPRLYDVGLMLWEEFDRPAAMRAFRVVRPDELRAEHWFELELAD
Ga0310909_111391942	3300031947	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVGDRLYEAGWMLWEEFDRPGAVRAFRVVRPDELQGEHWFELERAESATVLHH
Ga0318530_102766401	3300031959	Soil	MKIRNRHERIVTAPPERIAALIADFDRIWPRQIAPVPRLHGHRLYDAGLMRWEEFDRPGAARAFRVVRPEELQGEHWFELEL
Ga0308176_123357832	3300031996	Soil	VRIRNHHERVVAAPPERIAALIADLGRVWPTELAPAPRPRGQRLFDSGLMLWEEFDRPDAVRAFRVRRPAELRAEHWFDLEHAGDATLVRHTVEGHAAGEFAAVW
Ga0306922_120944522	3300032001	Soil	VQIRNRHERIVAAAPERVAALIADFDRVWPTEIAPAPRRRGPRLYDVGLMLWEEFDRPAAMRAFRVVRPDELRAEHWFELEL
Ga0306922_123017231	3300032001	Soil	MKIRNRHERIVTAPPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFELELAHGATVLRHTIEGYATGRYEA
Ga0318563_107745702	3300032009	Soil	MKIRNRHERIVTAPPERIAAFIADLDRIWPRQIAPPPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPEGLQGEHWFELELAHGATLLRHTIEGYA
Ga0318569_102733572	3300032010	Soil	MKIRNHHQRTVAAPPEQIAALIADFSRVWPTQIAPAPQLQGHRLYDAGLMSWEEFDRPGAARAFRVVRPHELQGEHWFELEPAQGATVLRHTIEASASG
Ga0310911_107157791	3300032035	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVGDRLYEAGWMLWEEFDRPGALRAFRVIKPDELQVEHW
Ga0318556_103825021	3300032043	Soil	MEIRNHHERLVAAPPGQIAALIADFDRVWPAQITPAPRWLRHRFYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELER
Ga0318558_102997841	3300032044	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVRDHVYQAGWMLWEEFDRPGALRAFRVIKPDELQVEHWFEVESAAGATVLRH
Ga0318506_100678511	3300032052	Soil	MKIRNRHERIVTAPPERIAALIADFDRIWPRQIAPVPRLHGHRLYDAGLMRWEEFDRPGAARAFRVVRPEELQGEHWFELELTQGATVLRHTI
Ga0318506_101292033	3300032052	Soil	MKITNRHERILTAPPERIAPLIADFDRIWPTEIEPAPRLVRDHVYQAGWMLWEEFDRPGALRAFRVIKPDELQVEHWFEVESAAGA
Ga0318570_104239331	3300032054	Soil	VQIRDRHERIVAAAPERVAALIADFDRVWPTEIAPAPRRRGPRLYDVGLMLWEEFDRPAAMRAFRVVRPDELRAEHWFELELADGGTVLRH
Ga0318575_103326291	3300032055	Soil	MKIRNHHQRIVAAPPGQIAALVADFGRVWPTQIAPAPRRLGHRLYDAGPMLWEEFDRPGAVRAFRVVRPDELQGEHWFELELAESATVLHHTLEGCAAGKY
Ga0318533_104876972	3300032059	Soil	MKVRKLHERIVAAPPARIAALIADFDRIWPTEIAPAPRPQGHRLFDAGLMLWEEFDRPGAARAFRVVSPPELQGENWFELERTEGATVVRHTLEGCAAGKTRRSGASGSSRFTTG
Ga0318533_106001511	3300032059	Soil	MKIRNRHERIVTAPPERIAAFIADLDRIWPRQIAPPPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELEGEHWFELELGQGATV
Ga0318505_103600291	3300032060	Soil	MKIRNRHERIITASPERIAALIADLDRIWPRQIAPAPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELQGEHWFELELAQGATV
Ga0318514_101295513	3300032066	Soil	MWVRMMIRNRHERTVAASPEETAALIADFDLVWPTQFGPAPRRQGQRLYEAGLFLWEEFDRPGAARAFRVVRPDEMQAEHWFETERAGGTTVLRHTVEGRATAE
Ga0318514_102235672	3300032066	Soil	MKITNRHERILTAPAERIAPLIADFDCIWPTEIGPAPRLVGDRLYEAGRMLWEEFDRPGALRAFRVVKPDELQVEHWFEVESAPGATVLRHTVEGYAAGRYEA
Ga0318553_104210271	3300032068	Soil	MKIRKRHERSIAAPPERIAALIADFDRVWPAQVAPAPRRQGHRYDAGLMLWEEFDRPGAVRAFRVVSPDELQGEHWFELE
Ga0318577_101352412	3300032091	Soil	MKIRNRHERIVTAPPERIAALIADFDRIWPRQIAPTPRLHGHRLYDAGLMLWEEFDRPGAARAFRVVRPDELEGEHWFELELGQGATVLR
Ga0318577_104699021	3300032091	Soil	MWVRMMIRNRHERTVAASPEETAALIADFDLVWPTQFGPAPRRQGQRLYEAGLFLWEEFDRPGAARAFRVVRPDEMQAEHWFETERAGGTTVL
Ga0335072_102230041	3300032898	Soil	MKITNRHERIVMAPPEAIAPLIADFDRIWPTEIGPPPRQVEDHLYEAGLMLWEEFDRPGALRAFRVIRPDEMRLEHWFEAEPAGGATILRH
Ga0335072_112409731	3300032898	Soil	MKITNCHERMLMASPERIAPLIADFDRIWPTEIGPAPRLVDDRLYEAGRMLWEEFDRPGALRAFRVVRPDELRLEHWFEAESAA
Ga0335077_101343901	3300033158	Soil	MKITNRHERILMAPAERIAPLIADFDRIWPTELGPAPRLVEDGLYEAGRMLWEEFDRPGALRAFRVVRPDELRLEHWFEAESAAGG
Ga0318519_107006302	3300033290	Soil	MKIRKRHERSIAAPPERIAALIADFDRVWPAQVAPAPRRQGHRYDAGLMLWEEFDRPGAVRAFRVVSPDELQGEHWFELEPAEGATVLRHTIEG
Ga0370483_0061579_1_243	3300034124	Untreated Peat Soil	MVAAPPERIVGLIADFDRVWPTEIGPAPRRQGHRLYDAGLMLWEEVDRPGAARAFRVVRPDEIQAEHWFELEPAGGATVLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053894

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences