Metagenome / Metatranscriptome Family F053855

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053855
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	46 residues
Representative Sequence	AIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Number of Associated Samples	99
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.43 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.857 % of family members)
Environment Ontology (ENVO)	Unclassified (41.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.49% β-sheet: 0.00% Coil/Unstructured: 63.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00436	SSB	2.14
PF07883	Cupin_2	2.14
PF00583	Acetyltransf_1	1.43
PF13469	Sulfotransfer_3	1.43
PF07690	MFS_1	1.43
PF13148	DUF3987	1.43
PF00072	Response_reg	0.71
PF00106	adh_short	0.71
PF00120	Gln-synt_C	0.71
PF05119	Terminase_4	0.71
PF14294	DUF4372	0.71
PF13561	adh_short_C2	0.71
PF00496	SBP_bac_5	0.71
PF04392	ABC_sub_bind	0.71
PF01564	Spermine_synth	0.71
PF00534	Glycos_transf_1	0.71
PF00383	dCMP_cyt_deam_1	0.71
PF13602	ADH_zinc_N_2	0.71
PF04542	Sigma70_r2	0.71
PF07681	DoxX	0.71
PF06707	DUF1194	0.71
PF13586	DDE_Tnp_1_2	0.71
PF02705	K_trans	0.71
PF13701	DDE_Tnp_1_4	0.71
PF07075	DUF1343	0.71
PF11149	DUF2924	0.71
PF04773	FecR	0.71
PF05199	GMC_oxred_C	0.71
PF01909	NTP_transf_2	0.71
PF13401	AAA_22	0.71
PF00589	Phage_integrase	0.71
PF13419	HAD_2	0.71
PF13400	Tad	0.71
PF02190	LON_substr_bdg	0.71
PF12587	DUF3761	0.71
PF04909	Amidohydro_2	0.71
PF12762	DDE_Tnp_IS1595	0.71
PF13683	rve_3	0.71
PF01613	Flavin_Reduct	0.71
PF13649	Methyltransf_25	0.71
PF02518	HATPase_c	0.71
PF08241	Methyltransf_11	0.71
PF01070	FMN_dh	0.71
PF13733	Glyco_transf_7N	0.71
PF13440	Polysacc_synt_3	0.71
PF05860	TPS	0.71
PF08443	RimK	0.71
PF10979	DUF2786	0.71
PF00587	tRNA-synt_2b	0.71
PF02515	CoA_transf_3	0.71
PF13495	Phage_int_SAM_4	0.71
PF13817	DDE_Tnp_IS66_C	0.71
PF00561	Abhydrolase_1	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	2.14
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	2.14
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.71
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.71
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.71
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.71
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.71
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.71
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.71
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.71
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.71
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.71
COG3210	Large exoprotein involved in heme utilization or adhesion	Intracellular trafficking, secretion, and vesicular transport [U]	0.71
COG3747	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.71
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.71
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.71
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.86 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.86 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.86 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.43 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	7.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.57 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.86 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.14 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.43 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.43 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.71 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.71 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
unclassified Nitrospirales	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.14 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.43 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.71 %
Aliidongia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia	0.71 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.71 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.71 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.71 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.71 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.14 %
Burkholderia cepacia complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex	1.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.43 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.71 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.71 %
Paraburkholderia bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	0.71 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.71 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.71 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.71 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.14 %
Burkholderia ubonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ubonensis	1.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.43 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.71 %
Mesorhizobium sp. 131-2-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-5	0.71 %
Aliidongia dinghuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	0.71 %
Paraburkholderia bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	0.71 %
Rhodospirillales bacterium 20-64-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	0.71 %
Nitrospirales bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	0.71 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.71 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102ICK6U	Not Available	510	Open in IMG/M
3300002245\|JGIcombinedJ26739_100286972	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300004633\|Ga0066395_10550712	All Organisms → cellular organisms → Bacteria → Terrabacteria group	671	Open in IMG/M
3300005440\|Ga0070705_100980265	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005454\|Ga0066687_10387995	Not Available	805	Open in IMG/M
3300005541\|Ga0070733_10420371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300005552\|Ga0066701_10103836	Not Available	1664	Open in IMG/M
3300005764\|Ga0066903_103969871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	793	Open in IMG/M
3300005764\|Ga0066903_105360165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300005921\|Ga0070766_10025850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3154	Open in IMG/M
3300006059\|Ga0075017_101221721	Not Available	589	Open in IMG/M
3300006854\|Ga0075425_101594586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	736	Open in IMG/M
3300007258\|Ga0099793_10491500	Not Available	609	Open in IMG/M
3300009089\|Ga0099828_11196117	Not Available	674	Open in IMG/M
3300009137\|Ga0066709_103581211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	563	Open in IMG/M
3300009143\|Ga0099792_10284312	Not Available	976	Open in IMG/M
3300009147\|Ga0114129_10585270	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300009147\|Ga0114129_10734969	Not Available	1265	Open in IMG/M
3300009792\|Ga0126374_11574867	Not Available	542	Open in IMG/M
3300010043\|Ga0126380_10276687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300010046\|Ga0126384_10510948	Not Available	1037	Open in IMG/M
3300010047\|Ga0126382_11080174	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300010048\|Ga0126373_10282879	Not Available	1647	Open in IMG/M
3300010159\|Ga0099796_10474011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300010359\|Ga0126376_10041609	Not Available	3196	Open in IMG/M
3300010359\|Ga0126376_10205218	Not Available	1637	Open in IMG/M
3300010359\|Ga0126376_10316894	Not Available	1365	Open in IMG/M
3300010360\|Ga0126372_10674071	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300010361\|Ga0126378_10505909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1323	Open in IMG/M
3300010361\|Ga0126378_11525910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300010361\|Ga0126378_13127505	Not Available	527	Open in IMG/M
3300010362\|Ga0126377_10472451	Not Available	1280	Open in IMG/M
3300010362\|Ga0126377_11661080	Not Available	714	Open in IMG/M
3300010366\|Ga0126379_12126116	Not Available	663	Open in IMG/M
3300010376\|Ga0126381_100408897	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	1892	Open in IMG/M
3300010376\|Ga0126381_100653870	Not Available	1500	Open in IMG/M
3300010376\|Ga0126381_101825965	Not Available	877	Open in IMG/M
3300010376\|Ga0126381_102020729	Not Available	831	Open in IMG/M
3300010376\|Ga0126381_102094966	Not Available	814	Open in IMG/M
3300010376\|Ga0126381_104455814	Not Available	541	Open in IMG/M
3300010398\|Ga0126383_10178940	Not Available	2013	Open in IMG/M
3300010398\|Ga0126383_10326444	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300010398\|Ga0126383_11594731	Not Available	742	Open in IMG/M
3300011271\|Ga0137393_11717190	Not Available	516	Open in IMG/M
3300012202\|Ga0137363_10258596	Not Available	1417	Open in IMG/M
3300012202\|Ga0137363_11720358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300012203\|Ga0137399_11375589	Not Available	592	Open in IMG/M
3300012210\|Ga0137378_11550137	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300012211\|Ga0137377_10780123	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300012362\|Ga0137361_11431128	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300012363\|Ga0137390_10753767	Not Available	933	Open in IMG/M
3300012685\|Ga0137397_11091740	Not Available	582	Open in IMG/M
3300012925\|Ga0137419_10414044	Not Available	1055	Open in IMG/M
3300012927\|Ga0137416_10334106	Not Available	1266	Open in IMG/M
3300012929\|Ga0137404_10542078	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300012929\|Ga0137404_11844166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_67_14b	563	Open in IMG/M
3300012929\|Ga0137404_12235142	Not Available	512	Open in IMG/M
3300012948\|Ga0126375_10029735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2688	Open in IMG/M
3300012948\|Ga0126375_10376333	Not Available	1017	Open in IMG/M
3300012987\|Ga0164307_11847182	Not Available	512	Open in IMG/M
3300016270\|Ga0182036_11103801	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300016294\|Ga0182041_10091873	All Organisms → cellular organisms → Bacteria → Proteobacteria	2203	Open in IMG/M
3300016294\|Ga0182041_10093166	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300016294\|Ga0182041_10274929	Not Available	1383	Open in IMG/M
3300016294\|Ga0182041_10624634	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300016319\|Ga0182033_10052581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2770	Open in IMG/M
3300016341\|Ga0182035_10033455	All Organisms → cellular organisms → Bacteria → Proteobacteria	3346	Open in IMG/M
3300016357\|Ga0182032_10788865	Not Available	802	Open in IMG/M
3300016357\|Ga0182032_11310410	Not Available	625	Open in IMG/M
3300016357\|Ga0182032_11432968	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → unclassified Nitrospirales → Nitrospirales bacterium	599	Open in IMG/M
3300016371\|Ga0182034_10103735	All Organisms → cellular organisms → Bacteria	2044	Open in IMG/M
3300016371\|Ga0182034_10492188	Not Available	1021	Open in IMG/M
3300016371\|Ga0182034_10583056	Not Available	942	Open in IMG/M
3300016371\|Ga0182034_11838244	Not Available	534	Open in IMG/M
3300016387\|Ga0182040_10279950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1267	Open in IMG/M
3300016445\|Ga0182038_10574406	Not Available	970	Open in IMG/M
3300016445\|Ga0182038_10608443	Not Available	944	Open in IMG/M
3300017943\|Ga0187819_10617034	Not Available	614	Open in IMG/M
3300018085\|Ga0187772_11340207	Not Available	530	Open in IMG/M
3300020580\|Ga0210403_10810819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300020581\|Ga0210399_10790357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300020581\|Ga0210399_11425073	Not Available	540	Open in IMG/M
3300021168\|Ga0210406_10105104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2397	Open in IMG/M
3300021178\|Ga0210408_10040439	All Organisms → cellular organisms → Bacteria	3662	Open in IMG/M
3300021178\|Ga0210408_10252318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1405	Open in IMG/M
3300021401\|Ga0210393_10450041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1051	Open in IMG/M
3300021405\|Ga0210387_10088786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2566	Open in IMG/M
3300021406\|Ga0210386_11638351	Not Available	533	Open in IMG/M
3300021478\|Ga0210402_10239767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300021560\|Ga0126371_12245900	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300022720\|Ga0242672_1121717	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300025916\|Ga0207663_11139128	Not Available	627	Open in IMG/M
3300026369\|Ga0257152_1003996	All Organisms → cellular organisms → Bacteria → Proteobacteria	1519	Open in IMG/M
3300026490\|Ga0257153_1043272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300026508\|Ga0257161_1032572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300028906\|Ga0308309_11205612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia bryophila	652	Open in IMG/M
3300030737\|Ga0302310_10586673	Not Available	590	Open in IMG/M
3300031545\|Ga0318541_10597180	Not Available	617	Open in IMG/M
3300031573\|Ga0310915_10318579	Not Available	1100	Open in IMG/M
3300031573\|Ga0310915_10612386	Not Available	771	Open in IMG/M
3300031668\|Ga0318542_10542941	Not Available	605	Open in IMG/M
3300031724\|Ga0318500_10488116	Not Available	618	Open in IMG/M
3300031744\|Ga0306918_10689675	Not Available	799	Open in IMG/M
3300031747\|Ga0318502_10963912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300031751\|Ga0318494_10100612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. 131-2-5	1593	Open in IMG/M
3300031753\|Ga0307477_10152883	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300031765\|Ga0318554_10258220	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300031779\|Ga0318566_10624716	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300031781\|Ga0318547_10712559	Not Available	624	Open in IMG/M
3300031796\|Ga0318576_10169822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300031797\|Ga0318550_10258319	Not Available	845	Open in IMG/M
3300031833\|Ga0310917_10187224	Not Available	1380	Open in IMG/M
3300031846\|Ga0318512_10470967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031859\|Ga0318527_10263971	Not Available	732	Open in IMG/M
3300031879\|Ga0306919_10168265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1611	Open in IMG/M
3300031893\|Ga0318536_10015595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3357	Open in IMG/M
3300031894\|Ga0318522_10258402	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300031910\|Ga0306923_10045253	All Organisms → cellular organisms → Bacteria	4829	Open in IMG/M
3300031910\|Ga0306923_10731916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1098	Open in IMG/M
3300031912\|Ga0306921_10293343	Not Available	1904	Open in IMG/M
3300031912\|Ga0306921_10316097	Not Available	1827	Open in IMG/M
3300031912\|Ga0306921_10604962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1267	Open in IMG/M
3300031912\|Ga0306921_10998307	Not Available	944	Open in IMG/M
3300031962\|Ga0307479_11371698	Not Available	666	Open in IMG/M
3300032001\|Ga0306922_10364025	Not Available	1550	Open in IMG/M
3300032001\|Ga0306922_10507062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300032001\|Ga0306922_10833400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ubonensis	962	Open in IMG/M
3300032010\|Ga0318569_10197231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium 20-64-7	932	Open in IMG/M
3300032041\|Ga0318549_10048477	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300032055\|Ga0318575_10097409	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300032076\|Ga0306924_10631688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Aliidongia → Aliidongia dinghuensis	1209	Open in IMG/M
3300032076\|Ga0306924_10925855	Not Available	962	Open in IMG/M
3300032091\|Ga0318577_10463817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300032091\|Ga0318577_10469589	Not Available	600	Open in IMG/M
3300032094\|Ga0318540_10356521	Not Available	706	Open in IMG/M
3300032094\|Ga0318540_10574302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300032261\|Ga0306920_100485486	Not Available	1834	Open in IMG/M
3300032261\|Ga0306920_100745195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ubonensis	1441	Open in IMG/M
3300032261\|Ga0306920_103890719	Not Available	544	Open in IMG/M
3300033290\|Ga0318519_10502352	Not Available	730	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.86%
Host-Associated	Host-Associated	2.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Plants	Host-Associated → Plants	2.14%
Aquatic	Environmental → Aquatic	1.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.14%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Sediment	Environmental → Aquatic → Sediment	0.71%
Peat	Environmental → Terrestrial → Peat	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.29%
Loam	Environmental → Terrestrial → Soil → Loam	5.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.43%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.14%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026369	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_07414410	2170459002	Grass Soil	ALLASNKATQNPSLAAAQPLHPARGTHNPKPIDAHYQAIQVAMQGVFHELGLAA
JGIcombinedJ26739_1002869721	3300002245	Forest Soil	AIKPLLAAAQPLRPKRGAHNRKPIDLHYDAIQVAMKGVFHELGLAA*
Ga0066395_105507121	3300004633	Tropical Forest Soil	VLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRVIQVAMHGLFHELGLAA*
Ga0070705_1009802651	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	DKAIKPLLAAAQPLRPTRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0066687_103879951	3300005454	Soil	AAQPLHPARGAHNPKPIDAHYHAIEVAMKGVFHELGLAA*
Ga0070733_104203711	3300005541	Surface Soil	PLLAAAQPLRPPRGAHNPTTLDTHYATIRVAMQGVFQELGLAA*
Ga0066701_101038364	3300005552	Soil	RPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0066903_1039698712	3300005764	Tropical Forest Soil	PLLAATRPLHPTHGGPNPKPIDAHYHALRFAMNGVFHELGIAA*
Ga0066903_1053601652	3300005764	Tropical Forest Soil	VVLRNKAIKPLLAAAQPLRPTGGPHNPRPIDTHYRAIQVAMHGVFHELGLAA*
Ga0070766_100258505	3300005921	Soil	LAAAQPLRPKRGAHNPKPIDLHYDAIQVAMKDVSMKDVFHELGLAA*
Ga0075017_1012217212	3300006059	Watersheds	VLRPLLAAAQSLEPSRGAQNPTPIDHHYQVIRIGMQGVFHELGIGA*
Ga0075425_1015945861	3300006854	Populus Rhizosphere	AAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAA*
Ga0099793_104915001	3300007258	Vadose Zone Soil	LRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0099828_111961171	3300009089	Vadose Zone Soil	PLLAAAQPLRPTRGAHNPKPIDLHYHAIQAAMQGVFHELGIAA*
Ga0066709_1035812111	3300009137	Grasslands Soil	KAIKPLLAAATAPTTAHNPQPIDLHYHTINVAMQGVFHELGLAA*
Ga0099792_102843121	3300009143	Vadose Zone Soil	AAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0114129_105852702	3300009147	Populus Rhizosphere	LAAAQQLRPARGAQNPKALDTHYDAIRVAMQGVFHELGLAA*
Ga0114129_107349691	3300009147	Populus Rhizosphere	KPLLAATQPLHPARGAHNPKPIDAHYQAIRVAMKGVFHEL*
Ga0126374_115748671	3300009792	Tropical Forest Soil	KAIKPLLAAAQPHRPTGGAHNPRPIDTHYRVIQVAMHGVFHELGLAA*
Ga0126380_102766873	3300010043	Tropical Forest Soil	VLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRVIQVAMHGLLHELGLAA*
Ga0126384_105109482	3300010046	Tropical Forest Soil	RPARGAHNPKPIDLHYHTIAIAMQGVFHELGLAA*
Ga0126382_110801742	3300010047	Tropical Forest Soil	ALLVLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRVIQVAMHGLLHELGLAA*
Ga0126373_102828791	3300010048	Tropical Forest Soil	KAIKPLLAAALPLRPTRGAHNPRPIDTHYRTIQVAMQGVFHELGLAA*
Ga0099796_104740112	3300010159	Vadose Zone Soil	AAQPLRPTRGAHNPKPIDLHYDTIQTAMQGVFHELGIAA*
Ga0126376_100416091	3300010359	Tropical Forest Soil	RNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAA*
Ga0126376_102052182	3300010359	Tropical Forest Soil	KAIKPLLAAAQPLRPTGAAHNPRPIDTHYRAIQVAMHGVFHELGLAA*
Ga0126376_103168942	3300010359	Tropical Forest Soil	RNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLLHELGLAA*
Ga0126372_106740712	3300010360	Tropical Forest Soil	VNKAIKPLLAAARPLHPTRGALNPKPIDAHYHALRFAMQGVFHELGIAA*
Ga0126378_105059091	3300010361	Tropical Forest Soil	AIKPLLAAAQPLHPIRGSHNPKPIDHHYQTINLAMQGVFHELGLAA*
Ga0126378_115259102	3300010361	Tropical Forest Soil	AIKPLLAAAQPLHPIRGSHNPKPIDHHYQTINLAMQGVFHELGRAA*
Ga0126378_131275052	3300010361	Tropical Forest Soil	LLAAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAT*
Ga0126377_104724511	3300010362	Tropical Forest Soil	LRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAA*
Ga0126377_116610801	3300010362	Tropical Forest Soil	LLVLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRVIQVAMHGLLHELGLAA*
Ga0126379_121261161	3300010366	Tropical Forest Soil	VLRNKAIKPLLAAAQPLRPTGGPHNPRPIDTHYRAVQVAMHGVFHELGLAA*
Ga0126381_1004088971	3300010376	Tropical Forest Soil	AIKPLLAATQELHPSHGAQNPRSLDTHYQTIYSGMRGVFHELGIAP*
Ga0126381_1006538703	3300010376	Tropical Forest Soil	LRNKAIKPLLAAAQPLHPTGGPHNPGPIDTHYRAIQGAMHGVFHELGLAA*
Ga0126381_1018259651	3300010376	Tropical Forest Soil	QPLRPTRGPHNPKPIDRHYHTINVAMDGVFHELGLAA*
Ga0126381_1020207292	3300010376	Tropical Forest Soil	NKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAT*
Ga0126381_1020949662	3300010376	Tropical Forest Soil	LRNKAIKPLLAAAQPLRPTRGPHNPKPIDRHYHTINVPMHGVFHELGLAA*
Ga0126381_1044558142	3300010376	Tropical Forest Soil	AIKPLLAAARPLRPTRRASNPQPIDNHYRALQLAMQGVFHELGIAA*
Ga0126383_101789404	3300010398	Tropical Forest Soil	LVVLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAT*
Ga0126383_103264444	3300010398	Tropical Forest Soil	ALLVLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRVIQVAMHGLFHELGLAA*
Ga0126383_115947312	3300010398	Tropical Forest Soil	PLLAAAQPLHSTRGAHNPKPIDVHYQTIQVAMQGVFHELGLAA*
Ga0137393_117171901	3300011271	Vadose Zone Soil	PLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0137363_102585961	3300012202	Vadose Zone Soil	KAIKPLLAAAQPLHPTRGAQNPKPIDAHYRALQLAMQCVFHQLGIAA*
Ga0137363_117203581	3300012202	Vadose Zone Soil	KAIKPLLAAAQPLHPTRGAQNPKPIDAHYRALQLAMQCVFHELGIAA*
Ga0137399_113755891	3300012203	Vadose Zone Soil	IKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0137378_115501372	3300012210	Vadose Zone Soil	AAQELRPARGPQNPKALDTHYDAIRVAMQGVFHELGLAA*
Ga0137377_107801232	3300012211	Vadose Zone Soil	KPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0137361_114311281	3300012362	Vadose Zone Soil	ATQPLHSARGAHNPKPIDAHYQAIRVAMKGVFHELGLAA*
Ga0137390_107537671	3300012363	Vadose Zone Soil	AIKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA*
Ga0137397_110917401	3300012685	Vadose Zone Soil	KAIKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAIKGVFHELGLAA*
Ga0137419_104140442	3300012925	Vadose Zone Soil	VLRDKAIKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAIKGVFHELGLAA*
Ga0137416_103341061	3300012927	Vadose Zone Soil	PLLAAAQPLHPARGAHNPKPIDAHYHAIEVAMKGVFHELGLTA*
Ga0137404_105420781	3300012929	Vadose Zone Soil	GQSSTPDHNPKPIDLHYGAIQAAMKGVFHELGLAA*
Ga0137404_118441661	3300012929	Vadose Zone Soil	RNKAIKPLLAAAQELRPTRGAQNSRALDTHYDAIRVAMQGVFHELGIAA*
Ga0137404_122351422	3300012929	Vadose Zone Soil	KPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAIKGVFHELGLAA*
Ga0126375_100297351	3300012948	Tropical Forest Soil	LLVLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRVIQVAMHGLFHELGLAA*
Ga0126375_103763331	3300012948	Tropical Forest Soil	VLRNKAIKPLLAAAQPLRPTGGAHNPRPIDTHYRAIQVAMHGLFHELGLAA*
Ga0164307_118471822	3300012987	Soil	LAAAQARHPARAPHNPKPIDAHYKAIRVAMNGVFHELGLAA*
Ga0182036_111038011	3300016270	Soil	NKAIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGPAA
Ga0182041_100918733	3300016294	Soil	LRNKAIKPLLAAARPLRPIRRASNPQPINTHYRALQLAMHGVFHELGIAA
Ga0182041_100931663	3300016294	Soil	LLRNKAIKPLLAAARPLHPTRGALNPKPIDAHYNTLRFAMQGVFHELGIAA
Ga0182041_102749292	3300016294	Soil	LIVLRNKAIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0182041_106246342	3300016294	Soil	AAAQEFKRTRGAQNPRPVDTHYQTIRIAMQGVFHELGITA
Ga0182033_100525811	3300016319	Soil	AAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0182035_100334551	3300016341	Soil	LLAAARPLRPARGSHNPKPIDAHYQTIQGAMRGIFHELGLAA
Ga0182032_107888652	3300016357	Soil	MTELVVLRNKAIKPLLAAAQPLHSTRGAHNPKAVDLHYQTIYVAMQSVFHELGLAA
Ga0182032_113104102	3300016357	Soil	PLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0182032_114329682	3300016357	Soil	TNKAIKPLLAAAQPLRPTRTAQNPQAIDAHNHALRVAMRGLFDELGVAA
Ga0182034_101037351	3300016371	Soil	AAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHEFGLAA
Ga0182034_104921881	3300016371	Soil	NKAIKPLLAAAQPLHPTRGAHNPTPIDMHYQTIQVAMKGVFHELGLAA
Ga0182034_105830562	3300016371	Soil	LHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0182034_118382442	3300016371	Soil	PLLAAAVPLRPPRGAHNPKPIDAHYHALRFAMQGIFHELGIAA
Ga0182040_102799503	3300016387	Soil	LHPTHGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0182038_105744061	3300016445	Soil	LLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGIAA
Ga0182038_106084431	3300016445	Soil	PLRPIRRASNPQPIDTHYRALQLAMHGVFHELGTAA
Ga0187819_106170341	3300017943	Freshwater Sediment	NKAIKPLLAAAQRLRPTRGAHNPRAIDRHYDAMRLAMQGVFHELGLAA
Ga0187772_113402071	3300018085	Tropical Peatland	KPLLAAARPLHPSRGGLNPKPIDAHYHALRFAMQGVFHELGIAA
Ga0210403_108108192	3300020580	Soil	RDKAIKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0210399_107903572	3300020581	Soil	HTRRYEPLLTGLRAMTALLILRDKAFKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0210399_114250731	3300020581	Soil	LLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFQELGLAA
Ga0210406_101051046	3300021168	Soil	LRAMTALLILRDKAFKPLLAAAQPLQPKRGAHNPKPIDLHYDAIQATMKGAFHELGLAA
Ga0210408_100404397	3300021178	Soil	IKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0210408_102523181	3300021178	Soil	LQPKRGAHNPKPIDLYYDAIQAAMKGVFHELGLAA
Ga0210393_104500412	3300021401	Soil	RNKAIKPLLAAAQPLRPTRGAHNPKPIDLHYYQIQAAMRGVFHELGLAA
Ga0210387_100887864	3300021405	Soil	LLAAAQPLQPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0210386_116383511	3300021406	Soil	HQTLAPAAQPLRPTRGAHNPKPIDLHYDAIQAAMRGVFLELGLAA
Ga0210402_102397675	3300021478	Soil	GLRAMTALLILRDKAFKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0126371_122459001	3300021560	Tropical Forest Soil	PLRATRGAHNAKPIDAHYRTIRIAMNGVFHELALAA
Ga0242672_11217171	3300022720	Soil	AQPLQPKRGAHNPKPIDLHYDAIQAAMKGVFHELELAA
Ga0207663_111391281	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LRDKAIKPLLAAAQPLQPKRGAHNPKPIDLYYDAIQAAMKGVFHELGLAA
Ga0257152_10039961	3300026369	Soil	AAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0257153_10432721	3300026490	Soil	HFCSIIKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0257161_10325723	3300026508	Soil	LTAIKPLLAAAQPLRPKRGAHNPKPIDLHYDAIQVAMKGVFHELGLAA
Ga0308309_112056121	3300028906	Soil	AAQPLHPKRGAYNPTPIDLHYDAIQAAMKGVFHELGLAA
Ga0302310_105866732	3300030737	Palsa	TTASLFTHHRAIKPLLAAAQDISPTRGGQNPRPIDRHYQDLRAAMKGVFHELGIAA
Ga0318541_105971801	3300031545	Soil	PLLAAAQPLHPTGGPHNPRPIDTHYRAIQVAMHGVFHELGLAA
Ga0310915_103185791	3300031573	Soil	IKPLLAAARPLHPTRGALNPKPIDAHYNTLRFAMQGVFHELGIAA
Ga0310915_106123862	3300031573	Soil	TALIVLPNKAIKPFLAAAQPLHPTRGAHNPTPIDTHYQTIQGAMKGVFHELGLAA
Ga0318542_105429412	3300031668	Soil	LPNKAIKPFLAAAQPLHPTRGAHNPTPIDTHYQTIQGAMKGVFHELGLAA
Ga0318500_104881162	3300031724	Soil	IKPLLAAAQPLHPTRSAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0306918_106896751	3300031744	Soil	QGDDRADRPPKQSHQTLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0318502_109639121	3300031747	Soil	LIVLRNKAIKPLLAAAQPLHPTRGAHNRTPIDTHYQTIQVAMKGVVHELGLTA
Ga0318494_101006121	3300031751	Soil	LRPARGSHNPKPIDAHYQTIQGAMRGIFHELGLAA
Ga0307477_101528831	3300031753	Hardwood Forest Soil	LRPTRGAHNPKPIDAHYRTIQIAMNGVFHELGLAA
Ga0318554_102582201	3300031765	Soil	LAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0318566_106247162	3300031779	Soil	LSARTRAPHNPKPIDRHYHTINVAMKGVFHELRLAA
Ga0318547_107125592	3300031781	Soil	LLLRNKAIKPLLAAARPLHPTRGALNPKPIDPHYHALRFAMQGVFHELGIAA
Ga0318576_101698221	3300031796	Soil	RAMTALIVLRNKAIKPLLAAAQPLHPTRGAHNRTPIDTHYQTIQVAMKGVVHEFGLTA
Ga0318550_102583191	3300031797	Soil	LHPTRGAHNPPPIDTHYQTIQVAMKGVFHELGLAA
Ga0310917_101872241	3300031833	Soil	KAIKPLLAAAQPLHPTHGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0318512_104709672	3300031846	Soil	NNAIKPLLAAAQPLHPTRGAHNRTPIDTHYQTIQVAMKGVVHELGLTA
Ga0318527_102639711	3300031859	Soil	IKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQGAMKGVFHELGLAA
Ga0306919_101682653	3300031879	Soil	KAIKPLLAAARPIHPTRRASNPQPIDTHYRALQLAMQGVFNELGIAA
Ga0318536_100155955	3300031893	Soil	ALIVLPNKAIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0318522_102584021	3300031894	Soil	PLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELALAA
Ga0306923_100452531	3300031910	Soil	IKPLLAAARPLRPIRRASNPQPINTHYRALQLAMHGVFHELGIAA
Ga0306923_107319162	3300031910	Soil	PLLAAAQPLHPTRGAHNPPPIDTHYQTIQVAMKGVFHELGLAA
Ga0306921_102933433	3300031912	Soil	IVLRNKAIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0306921_103160971	3300031912	Soil	LLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0306921_106049621	3300031912	Soil	KAIKPLLAAARPTRPTRRTHNPQPIDTHYRALQLAMQGVFHELGIAA
Ga0306921_109983072	3300031912	Soil	RSPGDDRLLVLRNKAIKPLLAAAQPICPTRAPHNPKPIDRHYHTINVAIKGVFHELGLAA
Ga0307479_113716982	3300031962	Hardwood Forest Soil	LRPKRGAHNPKPIDLHYDAIQAAMKGVFHELGLAA
Ga0306922_103640252	3300032001	Soil	AAAQPLHPTRGAHNPPPIDTHYQTIQVAMKGVFHELGLAA
Ga0306922_105070624	3300032001	Soil	DRPPKQSHQTLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0306922_108334002	3300032001	Soil	LRNKAIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVPMKGVFHELGLAA
Ga0318569_101972312	3300032010	Soil	RNKAIKPLLAAAQPLHPTRGPHNPKPIDRHYHAINVAMHGVFQELGLAA
Ga0318549_100484774	3300032041	Soil	KAIKPFLAAAQPLHPTRGAHNPTPIDTHYQTIQGAMKGVFHELGLAA
Ga0318575_100974092	3300032055	Soil	MTALLVLRNKAIKPLLAAAQPLCPTRGPHNPKPIDRHYHTINVAMKGVFHELRARR
Ga0306924_106316881	3300032076	Soil	LRNKAIKPLLAAAQTRHPARGAHNPKPIDVHYDALRRAMHGVFHELGIPA
Ga0306924_109258552	3300032076	Soil	NKAIKPLLAAAQPLRPTRAALNQKPIDTYYQAIRAGMKGLFHELGIAA
Ga0318577_104638173	3300032091	Soil	AIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVAMKGVFHELGLAA
Ga0318577_104695891	3300032091	Soil	LCPTRAPHNPKPIDCHYHTINVAIKGVFHELGLAA
Ga0318540_103565211	3300032094	Soil	KPFLAAAQPLHPTRGAHNPTPIDTHYQTIQGAMKGVFHELGLAA
Ga0318540_105743022	3300032094	Soil	QPLHPTGGPHNPRPIDTHYRAIQVAMHGVFHELGLAA
Ga0306920_1004854861	3300032261	Soil	KAIKPLLAAARALHLIRGGLNPKPIDAHYHALRFAMQGIFHELGIAA
Ga0306920_1007451952	3300032261	Soil	NKAIKPLLAAAQPLHPTRGAHNPTPIDTHYQTIQVPMKGVFHELGLAA
Ga0306920_1038907192	3300032261	Soil	DKAIKPLLAAAQALRPRRGAHNPTLLDAHYDALRSAMRGVFHELGIAA
Ga0318519_105023521	3300033290	Soil	PFLAAAQPLHPTRGAHNPTPIDTHYQTIQGAMKGVFHELGLAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053855

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences