NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F053682

Metagenome Family F053682

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F053682
Family Type Metagenome
Number of Sequences 140
Average Sequence Length 54 residues
Representative Sequence MSLLAEVLLVAEVETVLVVSELLVKKGTIPHESVTLEEEEEALLSSNVLLVT
Number of Associated Samples 3
Number of Associated Scaffolds 140

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 3
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Root
(97.857 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(100.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.00%    β-sheet: 0.00%    Coil/Unstructured: 55.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 140 Family Scaffolds
PF10536PMD 31.43
PF00665rve 7.14
PF13456RVT_3 2.14
PF00078RVT_1 2.14
PF00075RNase_H 0.71
PF00098zf-CCHC 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 140 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 7.14
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 7.14
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 7.14
COG4584TransposaseMobilome: prophages, transposons [X] 7.14

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RootHost-Associated → Plants → Roots → Unclassified → Unclassified → Root97.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.14%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300014486Endophyte microbial communities from Sorghum bicolor roots, Mead, Nebraska, USA - 072115-40_1 MetaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0182004_1000095543300014486RootVAGVEMALAVSELLAKKEMIPHESTTLEEEEEAMLSFGVLLVTWYSWGLFS*
Ga0182004_10002607193300014486RootVSLLAEVLVVAEVETVLVVSESLVKKGTIPHESVTLEEEEEEEALLSSDVLLVN*
Ga0182004_1000292453300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGTTPHESVTLEEVEEEELLSSNALLLT*
Ga0182004_10006152113300014486RootMSLLAEVLLAAEVGMVLDVSELLAKKGTIPHESVTLEEEEEALLSSDTLLVT*
Ga0182004_1000841083300014486RootMSLLAEVLLVVEVEMVLVVSELLVKKGMIPHESVILEEEGKALLSSDVLLVT*
Ga0182004_10008630103300014486RootVLLAVEVETVLAVSRLLVKKGTIPHESVTLEEEEEAMLSSDALLVT*
Ga0182004_1001128463300014486RootLISLLAEVLLAAEVEMVLVVSELLAKKEMIPHESVTLEEEEEAMLSSDALLVT*
Ga0182004_1001275163300014486RootVLLAAEVETVLAVSELLVKKGTIPHESVTLEEEEEVLLSSGVLLVTWCF*
Ga0182004_1001278953300014486RootMSLLAEVLLMAEVEMVLVVSEPLVKKKTIPHESVTLEEEEALLFSDALLVT*
Ga0182004_10013520103300014486RootMSLLAEVLLAAEVEMVLAVFELLVKKGTIPHESVTLEEGEEGLLSSGASLVTWYSWGLFS
Ga0182004_1001432853300014486RootVVEVEMVLVVSELLVKKGMIPRDSVTLEEGEEVMLSFDALLVTWYSWDPFS*
Ga0182004_1001450163300014486RootFAQAHWLMFLVAEVLLVVEAETVLAVSELLVKKGMILCESATLEEEKKVVLSSDALLVTWCS*
Ga0182004_1001595633300014486RootMSLLDEVLLATKVETVLAASELLVKKGTIPHESVTPEEEEEELLSSGVLPVIWCFWGLFS
Ga0182004_1001624243300014486RootVAEVEMALAVSGLLAKKETIPRESATLEGEEEAMLSSGVLLVT*
Ga0182004_1001713533300014486RootMSLLAEALLVAEVETVLAVSELLVKKGTIPHESVILEEEWKALLSSDVLLVT*
Ga0182004_1001786633300014486RootMFLLAEVLLVAEVETVLVVSELLVKKGTIPHESVILEEEGKAPLSSDVFLLT*
Ga0182004_1001789963300014486RootDRQSAHVHQLMSLLAEVLLAAEVETVLAVSELLAKKGTNPHESVTLEEEEEALLSSDALLVT*
Ga0182004_1001800353300014486RootMFLLAEVLLAAEVETVLDVSERPVKKGTIPHESVILEEEALLSSGVLLLTWCFWGLFS*
Ga0182004_1001827253300014486RootMSLLAEVLLVAEVETVLVVSKLLVKKETIPHESVTLEEEEALLSSNVLLVT*
Ga0182004_1001835433300014486RootVLLEAEVLPMVEVKMVLVVSGLLVKKGTIPRESVTLEEERKVVLSSGVLLVTWCS*
Ga0182004_1001849813300014486RootLAEVLLVVEVEMALAMSELLAKKETIPHESATLEEEEEAMVSSSILLVTWCSWGLFS*
Ga0182004_1001926523300014486RootMSLLAEVLLVAEVETVLVVSEPLVKKGTIPHESVTLEEEEEEALLFSDALLVT*
Ga0182004_1001935383300014486RootMSLLAAVLLAAEVEMVLAISELLVMKGTIPHESVTLEEEEEALLSSGVFLVTWCFWGLFSLPC*
Ga0182004_1001940053300014486RootMSLLADVLLAAEVETVLAMFELLVKKGTIPRESVTLEEEVEALLSFGVLLVTWCFWGLFS
Ga0182004_1001960543300014486RootVLLAAEVETVLAVSEHLAKKETIPHESVTLEEEEEAMLSSGVLLVTWCFWGLFS*
Ga0182004_1001999123300014486RootMSLVAEVLLVAEVETVLALSGPLVRKGTIPHESATLGEEKEVVLSFDALLVTWCS*
Ga0182004_1002076063300014486RootMAEVEMALAVSELLAKKETIPHETAILEEEEEAMLSSSVLLVTWYSWGLFS*
Ga0182004_1002143033300014486RootMSLLAEVLLAAEVETVLAVSELLAKKRTIPHESVTLEEEEEALLSSDASLMT*
Ga0182004_1002196643300014486RootMSLLTEVLLAAEVETVLAVSELLVQKATIPHESVTLEVEEEALLSSDASLVT*
Ga0182004_1002201583300014486RootMSLLAEVLLVAEVEMVLVVSELLVKKGTIPHELVILEEEGKALLSSDVLLVT*
Ga0182004_10022378113300014486RootMSLLAEVLLVAEVETVLVVSELLVKKETIPHESVTLEEEEEALLSSNVLLVT*
Ga0182004_1002285933300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGTIPHESVTLEEEEEALLSYGVLLVTWCFWGLFS
Ga0182004_1002384743300014486RootMFPLTEVLLVSRVEMVLAVSELLEKWGTILQGSVTLEEEEEALLFSDALPMTWYS*
Ga0182004_1002386153300014486RootVAGVEMMLVVSKLLAKKETIPHESVILEEEERALLFSGVSLVTWCFWSLFS*
Ga0182004_1002422033300014486RootMALAVSELLAKKETIPHESATLEEEEGVMLSSGVLAASWCS*
Ga0182004_1002495243300014486RootMSLLAEVLLAAEVETVFAVSELLVKKGTIPHESVTLEEALLSSSILLVTWCFWGLFS*
Ga0182004_1002507043300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGMIPHESVILEEGKALLSFDILLVT*
Ga0182004_1002556563300014486RootSLLAEVLLVAEVEMVLVVSELLVKKGTIPHESVILEEEGKALLSSDVLLVT*
Ga0182004_1002562043300014486RootVAEVEMVFVVAELLVKKGTIPHESVTLEEEEEALLSSGVLLLT*
Ga0182004_1002648263300014486RootMSLLAEVLLASEVETVLAVSELLVKKGMIPHESVTQEEEEEALLSSDALLVT*
Ga0182004_1002772843300014486RootVFLVAEVETVLAVSELLAKKEMIPHESVILKEEEEAMLSSGILLVTWCFWGLFS*
Ga0182004_1002819343300014486RootVAEVEMVLVVSQLLVKKRTIPDESVTLEEEEEALLFSHALLVT*
Ga0182004_1002835163300014486RootMSLLAEVLLAAEVETTLAVSELLVKIGMIPHESVTLEEEEEEALLSSGVLLVTWCFWGLFS*
Ga0182004_1002871223300014486RootVSLLAEVLLVAEVEMVLVVSEPLVKKGTIPHESVTLEEEEEALLSSDVLLVT*
Ga0182004_1002873363300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGMIPLESVTLVEEGEVMLSSDALLVTWYSWDPFS
Ga0182004_1002974733300014486RootVLLVAEVEMVFVVSELLVKKGTIPHESVTLEEEEEEALLSSGVLLVI*
Ga0182004_1003100943300014486RootMSLLAEVLLVAEVETVLVVFELLVKKGSIPHESVIVEEGKALLSSDVLLVT*
Ga0182004_1003199953300014486RootMSLLAEVLLVVEVETMLVVSELLVKEGMIPHESVILEEEGKALLSSDVLLVT*
Ga0182004_1003231853300014486RootMSLLAEVPLNAEVEMVLVVSELLVKKETIPHESVTLEEEEEALLSFDVLLVT*
Ga0182004_1003233643300014486RootMSLLAEVLLAAEVETVLDVSECLVKKGTIPHESATLEEGEEALLSSGILLVTWCF*
Ga0182004_1003242643300014486RootVLLVVELEMVLVVSELLVKKGTIPHESVILEEEEKALLSSDVLLVT*
Ga0182004_1003294363300014486RootVAEVEMVLSTSGFLEKKGMIPLESVTLGEEEALLFSDALLVTWYS*
Ga0182004_1003364963300014486RootVAEVEMVFVVAELQVKKGTIPHESVTLEEEEEEALLSSGVLLVT*
Ga0182004_1003370843300014486RootMSLLTEVLLVAEVEMILVVSELLVKKGTIPHESVTLDKGEEVLLFSDTLPVT*
Ga0182004_1003523823300014486RootLAEVLLAAEVEMVLVVSELLVKREMIPHESETLEEEEEAMLSSGVLLVTWCSWGLFF*
Ga0182004_1003613443300014486RootMSLLAGVLLVAEVETVLVVSEFLVKKGTIPHESVTLEEEEEVMLSSGVLLVTWCFWGLFS
Ga0182004_1003736243300014486RootMSLVAEVLLVAKVLLVTEVETVLAVSGSLVKKGTIPHESTTLEEEKKVVLSSDVLLVAWCSWSLFS*
Ga0182004_1003767613300014486RootVAEVEMVFVVAELLVKKGTIPHESVTLEEEEEALLSSSVLLVT*
Ga0182004_1003843143300014486RootMFLVAEVLLVVEAETVLAVSELLVKKGTILGESTTLEEEKRVVLSSNTLLVTWCS*
Ga0182004_1003857423300014486RootMFLVAELLLVVEVETVLAESGLLVKKGTIPHESVTLGEEEKALLSSDVLLETWCS*
Ga0182004_1003921743300014486RootMFLVAEVLLVVEAETVLAVSELLVKKGTILHESVTLEEEKRVVLSSDALLVTWCT*
Ga0182004_1003941913300014486RootMSLLAEVLLAAEVETALAVSEPLVKKGTIPHEPVTLEEGEKVLLSSGVLLVTWYFWGLSS
Ga0182004_1003981543300014486RootMSLLVEVLLVAEVETVLVVSELLVKKGTIPHESVTLEEEEEALLSSGVLLVT*
Ga0182004_1004051953300014486RootMSLLAEVLLVAEVETVLAVSELLVKKGTIPHESLTLEEEEVLLSSDVLLAT*
Ga0182004_1004153833300014486RootMSLLAEVLLVAEVETMLVVSESLVKKGTIPHESVTLEEEEEALLSSEVLLVT*
Ga0182004_1004223653300014486RootVLLAAEVEMVLAVSELLVKKETIPHESVTLEEEEEAMLSSGILLVIWCFWDLFS*
Ga0182004_1004230033300014486RootVSLLAEVLLVAEVETVLVVSESLVKKGTIPHESVTLEEEEEALLSSHVLLVT*
Ga0182004_1004233123300014486RootMSFLAEVLLVDEVETVLVVSELLVKKGTIPHESVTLEEEEEALLSSDVLLVT*
Ga0182004_1004295343300014486RootVAEVKMALPVSELLVKKETIPRGSATLEEEEVMQSSGVSLVTWYSWGLFS*
Ga0182004_1004320723300014486RootMSLLAEVLLAEVLLAAEVETVLAVSELLVKKGTIPHESVTLEEEEEALLSSDALLVT*
Ga0182004_1004391353300014486RootMSLLAEVLLVAEVETMLLVSELLVKKGTIPHESVILEEEGKALLSSDVLLVT*
Ga0182004_1004429923300014486RootMFLLAEELLVAEVEIMLDVSERSVKKGTIPHESVTLEEEALLSSGVFLVTWCFWGLFS*
Ga0182004_1004459143300014486RootMSLLAEVLLVAEVEMVLVVSESLAKKGTIPHESVTLEEEEEALLSSDVLFVT*
Ga0182004_1004463223300014486RootMSLLVKVLLVAEVETMLVVSELLVKKGTIPHESVTLEEEEALLFSDALLVT*
Ga0182004_1004558633300014486RootMSLLAEVLLAAEVETVLAVSKLLVKKGTIPHEPVTLEEEVLLSSGILLVTWCFWGLSS*
Ga0182004_1004574543300014486RootMSLLVEVLLVAEVEMVLVVSGSLVRNGTIPHESVIPEEEKKVVLSSDVLLVTWCFWGLFS
Ga0182004_1004642113300014486RootLIEVLLVAEVEIVFVAAELLVKKGTIPHESVTLEEGEEALLSSGVLLVI*
Ga0182004_1004912823300014486RootMSPVAEVLLVAEVEMVLVVSELLAKKGTIPHESVTLDEEEAMLPSCVLLVTWCFWGLFS*
Ga0182004_1005037923300014486RootVVEVEMALVVSELLAKKETIPHESAILEEEEAMLSSGILLVTWYSWGLFS*
Ga0182004_1005066443300014486RootVAEVEMALAVSELLAKKETIPHESATLEEEEEVMLSSGVLLMTWYSWGLSS*
Ga0182004_1005191133300014486RootVLLAAEVETVLAVSELLVKRETIPHESAILEEEKKVVLSSGVWLAT*
Ga0182004_1005217123300014486RootLSLLAEVLLVTEVETVLVVSELLVKKGTIPHESVTLEEEEALLSSDVLLVI*
Ga0182004_1005227323300014486RootVSLLEDVLLVAEVKTVLVVSESLVEKGTIPHESVTLGEKEEALLFSDALLVT*
Ga0182004_1005289673300014486RootVLHGAEVLLVVEVEMVLAVFGLLVKKGTIPHESATLEEEKKVVLSSDILLVTWCSWGLFS
Ga0182004_1005299133300014486RootMSLVAEVLLVAEVEMVLAVSELLVKKGTILHESAILGEEKKVVLSSDVLLVGWCFWGLFS
Ga0182004_1005330623300014486RootMSLLAEVLLAVEAETVLVVSELLVKKGTIPHESVTLEEEEEALLSFDVVLVI*
Ga0182004_1005375523300014486RootMSLLVVVLLVAEVETVLVVSEPLVKKGTIPHESVTLEEEEALLSSGILLVA*
Ga0182004_1005398123300014486RootMFLLAEALLVAKVETVLVVSEPLVKKGTIPHESVILEEEEGASLFSDALLVT*
Ga0182004_1005577133300014486RootMSLLAEVLLAAEVETMLDVSERLVNKGTTPHESVTLDEEEEALLSFGVLLMTWCFWGLFS
Ga0182004_1005629813300014486RootVAEVEIVFVVAELLVKKGTIPHESLTLEEEEGARLVSGVLLVI*
Ga0182004_1005653343300014486RootMFLVAEVLLVVEVAMVLAESGLLVKKGTIPHESVTLDVEEKALLSSNALLVTWCS*
Ga0182004_1005665153300014486RootMSLLAEVLLAAEVEMVLVVSELLVKKGAIPHESVTLEEEEEALLPSCILLVTWCFWGLFS
Ga0182004_1005731823300014486RootMSLLAEVLLVAEVETMLVVSELLVKKGTIPHESVTLEEEEEALLSSDVLLVT*
Ga0182004_1005759133300014486RootVLLEAEVLPIVEVKMVLAVSGLLVKKGTIPLESRTLEEERKVVLSSGVLLVTWCSWGLFS
Ga0182004_1006032833300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGTIPRESVTLDEEEEALLSSDVLLVT*
Ga0182004_1006113033300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGTIPHESVILDEEGKALLSSNVLLLT*
Ga0182004_1006160933300014486RootMSLLAEVLLAAEVETVFAVSGLLVKKETIPHESVTQEEEQETLLSSGVLLVTWCFWGLSS
Ga0182004_1006221833300014486RootMSLLAEVLLVAEVGTVLVVSESLVKKGTIPHESATLEEEEEEALLFSDALLVT*
Ga0182004_1006410223300014486RootLISLLAEVLLAAEVETVLAVSGLLVKKGTIPHESVTLEEEEAMLSSGVLLVAWCFWGLFS
Ga0182004_1006602843300014486RootVVELETALAESGPLVKKGTIPHESVTLDEEEKVLLSSDIFLVTWCS*
Ga0182004_1006882423300014486RootMSLLAEVLLAAEVEMVLVVCELLVKKGTIPHESVTLEEEEALLSSGVLLVTWCFWSLFS*
Ga0182004_1006916533300014486RootMSLLVEVLLVAEVETVFAVSELLVKKETIPHESVTLEEEEALLSFDALLVT*
Ga0182004_1007000543300014486RootMFLLAEVLLVAEVETVLAVSELLVKKGTIPHESVTLDEEEEVMLSSGVLLVTWCFWGLFS
Ga0182004_1007260933300014486RootMSLLAEVLLLAKVETVLVVSESLVKKETIPHESVTLEEEEEVLLSSNVFLVT*
Ga0182004_1007301113300014486RootVLLEVEEFPVVEVKMVLAVSGLLAKKGMIPHESVTLEEERKVVLSSGVLLVTWYSWGLFS
Ga0182004_1007650123300014486RootMSLLDEVLLAVEVETVLAVSGLLVKKGTIPNESVTLEEEEAMLSSSVLLVTWCFWGLFS*
Ga0182004_1008123933300014486RootMSLLAEVLLVAEVETVLVVSKLLVKKGTIPHESVILEEEGKVLLSSDILLVT*
Ga0182004_1008250423300014486RootMSLLAEVLLVAEVETVVVVPESLVKKGTIPHESVTLEEEEEALLSSDVLLVT*
Ga0182004_1008427113300014486RootMSLVAEVLLVAEVEMVLVVSESLVKKETIPHESVTLEEEEEALLSSNILLVT*
Ga0182004_1008813233300014486RootMSLLAEVLLVAEVEMVLVVSESLVKKGTIPHESVTLEEEEEALLSSGVLLVT*
Ga0182004_1009266823300014486RootMSLLAEVLLVAEVEMVLVVSESLVKKGMIPHESVTLEEGEKALLSSGVLLVTWCFLGLFF
Ga0182004_1009732013300014486RootMSLLAAVLLVTEVETVLAVSELLAKKGTIPHESVTLDEEEEETMLSSGVLLVTWCFWGLFS*
Ga0182004_1009857533300014486RootMSLLAEVEMVLVVSEPLAKKGTIPHESVTLEEEEVLLFSDALLVT*
Ga0182004_1009895713300014486RootVFLLAEVLLVAGVETVLVVSESLVKKETIPHESVTLEEEEEEALLSSDVLLVT*
Ga0182004_1010108223300014486RootMSLLTEVLLAVEVVMALAVSELLAKKEMIPHESAILEGEEEVMLSSGVSLVI*
Ga0182004_1010584233300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGTIPQESVTLEEEEEALLSSDVLLVT*
Ga0182004_1010840033300014486RootMSLLAEVLLAAEVEMVLVVSELLAKKGTIPHESVTLEEEEVLLSFDALLVT*
Ga0182004_1011029613300014486RootVAEVEMALAVSELLAKKETIPHESVTLEEEEEAMLSSGVLLVTWYSWGLFS*
Ga0182004_1011312223300014486RootVAEVKMALAASKLLEKETIPHESVTLEEEEEAMLSSGVLLVTWYSWGLFS*
Ga0182004_1011705123300014486RootVELEMVLAESELLVKKGTILRESVILGEEKKVVPFSGILPVTWCSWGPFS*
Ga0182004_1011892323300014486RootMSLLAEVLLAVEVETVLAVSELLAKKETIPHDLVFLEEEEEAILSSGALLVTWCFWGLFS
Ga0182004_1012049523300014486RootMSLLAEVGTVLVVSEPLVKKGTIPHESVTLEEEGEVMLSSDVLLVTWYSWDPFS*
Ga0182004_1012309723300014486RootMSLLAGVLLVGKVETVLVVSEFLVKKGTIPHESVTLEEEDEALLSSGVLLVTWCFWGLFS
Ga0182004_1012691213300014486RootMFLLAEVLVVAEVEMVLVVSESLVKKGMIPHESVTLEEEEVLLSSGLLLVT*
Ga0182004_1014084723300014486RootVAEVEMVLVVSESIEKKGMIPLESVTLEEEEEEALLFSDALLVT*
Ga0182004_1014229723300014486RootMFLVAEVLLVVEVEMVLAESGLLVKKGTIPHESVTLDEEEKALLSSDALLMTWCS*
Ga0182004_1015046613300014486RootMSLLAEVLLVDEVETMLVVSELLVKKGTIPHESVTLEEEEEEVLLYSDILLVT*
Ga0182004_1015065313300014486RootVLLEAEVEMVLAVSELLAKKETIPHESVTLEEEEEAMLSSIVLLVTWCF*
Ga0182004_1015392223300014486RootMSLLAAVLLVAEVETVLVVSELLVEKGTIPCESVILEEGKALLSSDVLLVT*
Ga0182004_1018101113300014486RootMSLLAEVLLVAEVEMVLVVSESLVKKGTIPHESVTLEEEEEVLLSSGVLLVT*
Ga0182004_1018429613300014486RootMSLLAEVLLVAEVETVLVVSEPLVKKGMIPHESVTLEEEEEALLFSDALLVT*
Ga0182004_1020714213300014486RootMSLLAEVLLAVEVEMVLDVSECLVKKGTIPHESATLEEEEEALLSSSVLLVIWCF*
Ga0182004_1022407013300014486RootMSLLAEALLVAEVEAVLVVSEPLVKKGMIPHESVTLEEGGASLFSDALLVT*
Ga0182004_1023285923300014486RootMSLLVEVLLVAEVEMVLVLSELLVKKGTIPHESVTLEDEEEVLLSSDALHVT*
Ga0182004_1023881213300014486RootMSLLAEVLLVAEVETVLVVSELLVKKGTIPHESVTLEEEEEALLSSNVLLVT*
Ga0182004_1024277323300014486RootVLLAAEVATVLAVSGLLVKKGTIPHESVTLEEEEAMLSSGVLLVTWCFWGLFSSPG*
Ga0182004_1026949713300014486RootMALAVSGLLVKKETIPHESATLEEEEEAMLSSGVLLVTWYSWGLFS*
Ga0182007_1036008913300015262RhizosphereLISPLSEVLLAVEVKMVLAESGLLVKKGTISHESVTLEEEEEASLFSGALCL*
Ga0182005_116626723300015265RhizosphereVLLAVEVEMVLAVSELLVKKETIPHESVTLEEEEAMLSSGVLLVTWCFWGLSS*
Ga0182005_125725813300015265RhizosphereVAEVETVLVVSKLLVKKETIPHESVTLEEEEEAMLSSIILLVTWCF*

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.