Metagenome / Metatranscriptome Family F053605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053605
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	60 residues
Representative Sequence	VGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD
Number of Associated Samples	118
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.94 %
% of genes near scaffold ends (potentially truncated)	42.55 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.355 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.440 % of family members)
Environment Ontology (ENVO)	Unclassified (26.950 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.865 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.98% β-sheet: 0.00% Coil/Unstructured: 54.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00005	ABC_tran	7.09
PF13519	VWA_2	5.67
PF00072	Response_reg	2.84
PF03693	ParD_antitoxin	2.84
PF00578	AhpC-TSA	1.42
PF02604	PhdYeFM_antitox	0.71
PF00092	VWA	0.71
PF05016	ParE_toxin	0.71
PF08281	Sigma70_r4_2	0.71
PF12695	Abhydrolase_5	0.71
PF02055	Glyco_hydro_30	0.71
PF00156	Pribosyltran	0.71
PF03544	TonB_C	0.71
PF06289	FlbD	0.71
PF04264	YceI	0.71
PF06537	DHOR	0.71
PF05974	DUF892	0.71
PF08448	PAS_4	0.71
PF02517	Rce1-like	0.71
PF06940	DUF1287	0.71
PF00460	Flg_bb_rod	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	2.84
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1256	Flagellar hook-associated protein FlgK	Cell motility [N]	0.71
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1558	Flagellar basal body rod protein FlgC	Cell motility [N]	0.71
COG1582	Swarming motility protein SwrD	Cell motility [N]	0.71
COG1749	Flagellar hook protein FlgE	Cell motility [N]	0.71
COG1815	Flagellar basal body rod protein FlgB	Cell motility [N]	0.71
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.71
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.71
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.71
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.71
COG3738	Uncharacterized conserved protein YijF, DUF1287 family	Function unknown [S]	0.71
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.71
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.71
COG4786	Flagellar basal body rod protein FlgG	Cell motility [N]	0.71
COG4787	Flagellar basal body rod protein FlgF	Cell motility [N]	0.71
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.35 %
Unclassified	root	N/A	49.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.35 %
Unclassified	root	N/A	49.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.35 %
Unclassified	root	N/A	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.44 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.42 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	17.73 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	17.73 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	0.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.80 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.42 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.71 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.42 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.71 %
unclassified Sphingopyxis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → unclassified Sphingopyxis	0.71 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	0.71 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.42 %
Sphingopyxis sp. LC363	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → unclassified Sphingopyxis → Sphingopyxis sp. LC363	0.71 %
unclassified Syntrophus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria)	0.71 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.71 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.44 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.42 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1.42 %
Syntrophus sp. PtaB.Bin138	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin138	0.71 %
Sphingopyxis sp. LC363	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → unclassified Sphingopyxis → Sphingopyxis sp. LC363	0.71 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.71 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01CLRFR	Not Available	600	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105129991	Not Available	776	Open in IMG/M
3300001686\|C688J18823_11037385	Not Available	520	Open in IMG/M
3300002914\|JGI25617J43924_10082084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300003324\|soilH2_10031789	All Organisms → cellular organisms → Bacteria	7683	Open in IMG/M
3300004081\|Ga0063454_100962317	Not Available	682	Open in IMG/M
3300004152\|Ga0062386_100453323	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300004152\|Ga0062386_100473286	Not Available	1015	Open in IMG/M
3300004153\|Ga0063455_100503217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300004156\|Ga0062589_102415264	Not Available	542	Open in IMG/M
3300004479\|Ga0062595_100191813	Not Available	1251	Open in IMG/M
3300004479\|Ga0062595_100239736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300005175\|Ga0066673_10002815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6498	Open in IMG/M
3300005176\|Ga0066679_10047936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2446	Open in IMG/M
3300005178\|Ga0066688_10686338	Not Available	652	Open in IMG/M
3300005179\|Ga0066684_10386226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300005184\|Ga0066671_10727952	Not Available	639	Open in IMG/M
3300005332\|Ga0066388_100944711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1434	Open in IMG/M
3300005332\|Ga0066388_101915381	Not Available	1059	Open in IMG/M
3300005336\|Ga0070680_101278288	Not Available	635	Open in IMG/M
3300005434\|Ga0070709_10019198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3947	Open in IMG/M
3300005434\|Ga0070709_10027199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3399	Open in IMG/M
3300005435\|Ga0070714_100715631	All Organisms → cellular organisms → Bacteria → Acidobacteria	967	Open in IMG/M
3300005435\|Ga0070714_101771753	Not Available	603	Open in IMG/M
3300005439\|Ga0070711_100796743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300005445\|Ga0070708_100583282	Not Available	1054	Open in IMG/M
3300005458\|Ga0070681_10125343	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300005468\|Ga0070707_100314178	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300005529\|Ga0070741_10001254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	79505	Open in IMG/M
3300005529\|Ga0070741_10026882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8378	Open in IMG/M
3300005540\|Ga0066697_10312240	Not Available	922	Open in IMG/M
3300005541\|Ga0070733_10496383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	816	Open in IMG/M
3300005542\|Ga0070732_10000129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	68594	Open in IMG/M
3300005542\|Ga0070732_10974044	Not Available	518	Open in IMG/M
3300005552\|Ga0066701_10874767	Not Available	533	Open in IMG/M
3300005559\|Ga0066700_10121094	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1741	Open in IMG/M
3300005560\|Ga0066670_10318696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300005563\|Ga0068855_100463148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1382	Open in IMG/M
3300005564\|Ga0070664_101269411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300005566\|Ga0066693_10011855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2478	Open in IMG/M
3300005569\|Ga0066705_10697834	Not Available	612	Open in IMG/M
3300005574\|Ga0066694_10281628	Not Available	790	Open in IMG/M
3300005574\|Ga0066694_10440605	Not Available	610	Open in IMG/M
3300005576\|Ga0066708_10190202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300005586\|Ga0066691_10511939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300005587\|Ga0066654_10766685	Not Available	545	Open in IMG/M
3300005944\|Ga0066788_10010803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1920	Open in IMG/M
3300005993\|Ga0080027_10018817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2454	Open in IMG/M
3300005994\|Ga0066789_10000037	All Organisms → cellular organisms → Bacteria	34721	Open in IMG/M
3300006028\|Ga0070717_11835540	Not Available	548	Open in IMG/M
3300006032\|Ga0066696_10413276	Not Available	881	Open in IMG/M
3300006046\|Ga0066652_100276423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin138	1481	Open in IMG/M
3300006046\|Ga0066652_100845338	Not Available	875	Open in IMG/M
3300006163\|Ga0070715_10067043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1593	Open in IMG/M
3300006794\|Ga0066658_10765481	Not Available	540	Open in IMG/M
3300006794\|Ga0066658_10796106	Not Available	532	Open in IMG/M
3300006796\|Ga0066665_11622838	Not Available	510	Open in IMG/M
3300006797\|Ga0066659_11058900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300006800\|Ga0066660_11349156	Not Available	558	Open in IMG/M
3300006800\|Ga0066660_11620619	Not Available	513	Open in IMG/M
3300006804\|Ga0079221_10499843	Not Available	789	Open in IMG/M
3300006804\|Ga0079221_10924060	Not Available	644	Open in IMG/M
3300006806\|Ga0079220_11265357	Not Available	615	Open in IMG/M
3300006854\|Ga0075425_100000991	All Organisms → cellular organisms → Bacteria	27252	Open in IMG/M
3300006893\|Ga0073928_10010883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10708	Open in IMG/M
3300006893\|Ga0073928_10497799	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300006904\|Ga0075424_102381231	Not Available	556	Open in IMG/M
3300006914\|Ga0075436_101431511	Not Available	524	Open in IMG/M
3300009012\|Ga0066710_100775446	Not Available	1468	Open in IMG/M
3300009012\|Ga0066710_104155019	Not Available	541	Open in IMG/M
3300009089\|Ga0099828_11092360	Not Available	709	Open in IMG/M
3300009137\|Ga0066709_102501900	Not Available	696	Open in IMG/M
3300009137\|Ga0066709_103685265	Not Available	556	Open in IMG/M
3300009174\|Ga0105241_10008274	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	7657	Open in IMG/M
3300009174\|Ga0105241_10308831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1360	Open in IMG/M
3300010048\|Ga0126373_11250050	Not Available	809	Open in IMG/M
3300010048\|Ga0126373_13001224	Not Available	526	Open in IMG/M
3300010361\|Ga0126378_10331943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1628	Open in IMG/M
3300010373\|Ga0134128_10712213	Not Available	1114	Open in IMG/M
3300010376\|Ga0126381_103066631	Not Available	662	Open in IMG/M
3300010376\|Ga0126381_104390400	Not Available	545	Open in IMG/M
3300010937\|Ga0137776_1592254	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300011270\|Ga0137391_10035891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4184	Open in IMG/M
3300012019\|Ga0120139_1097091	Not Available	737	Open in IMG/M
3300012199\|Ga0137383_10022138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4408	Open in IMG/M
3300012200\|Ga0137382_10951876	Not Available	618	Open in IMG/M
3300012201\|Ga0137365_11104059	Not Available	571	Open in IMG/M
3300012205\|Ga0137362_11086749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300012208\|Ga0137376_10878752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300012210\|Ga0137378_11676169	Not Available	543	Open in IMG/M
3300012349\|Ga0137387_10185770	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300012357\|Ga0137384_10450921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300012363\|Ga0137390_11588060	Not Available	592	Open in IMG/M
3300012390\|Ga0134054_1172229	Not Available	649	Open in IMG/M
3300012469\|Ga0150984_123075046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012532\|Ga0137373_10443742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300012917\|Ga0137395_10212317	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1350	Open in IMG/M
3300012930\|Ga0137407_10676279	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300012948\|Ga0126375_11782863	Not Available	537	Open in IMG/M
3300012960\|Ga0164301_10559723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300012961\|Ga0164302_10173112	Not Available	1298	Open in IMG/M
3300012975\|Ga0134110_10243603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300012977\|Ga0134087_10568096	Not Available	582	Open in IMG/M
3300012986\|Ga0164304_11633108	Not Available	538	Open in IMG/M
3300013100\|Ga0157373_10349017	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300013297\|Ga0157378_12694327	Not Available	550	Open in IMG/M
3300013307\|Ga0157372_10144159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2747	Open in IMG/M
3300013307\|Ga0157372_11650210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300013764\|Ga0120111_1081224	Not Available	776	Open in IMG/M
3300013832\|Ga0120132_1008142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1697	Open in IMG/M
3300015262\|Ga0182007_10203546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → unclassified Sphingopyxis → Sphingopyxis sp. LC363	693	Open in IMG/M
3300015264\|Ga0137403_10615941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300015356\|Ga0134073_10146143	Not Available	743	Open in IMG/M
3300018468\|Ga0066662_10559631	Not Available	1059	Open in IMG/M
3300020001\|Ga0193731_1173608	Not Available	515	Open in IMG/M
3300020579\|Ga0210407_10000285	All Organisms → cellular organisms → Bacteria	61002	Open in IMG/M
3300020580\|Ga0210403_11063078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300020583\|Ga0210401_10317126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1420	Open in IMG/M
3300021344\|Ga0193719_10472563	Not Available	507	Open in IMG/M
3300021362\|Ga0213882_10283245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300021560\|Ga0126371_10796322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300022557\|Ga0212123_10733913	Not Available	603	Open in IMG/M
3300025916\|Ga0207663_10567026	Not Available	889	Open in IMG/M
3300025929\|Ga0207664_11482970	Not Available	600	Open in IMG/M
3300026291\|Ga0209890_10005234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5515	Open in IMG/M
3300026324\|Ga0209470_1111485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1220	Open in IMG/M
3300027773\|Ga0209810_1236696	Not Available	708	Open in IMG/M
3300027812\|Ga0209656_10396326	Not Available	619	Open in IMG/M
3300027842\|Ga0209580_10000010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	515850	Open in IMG/M
3300027862\|Ga0209701_10725057	Not Available	509	Open in IMG/M
3300027867\|Ga0209167_10128780	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300027867\|Ga0209167_10396743	Not Available	752	Open in IMG/M
3300027882\|Ga0209590_10819125	Not Available	590	Open in IMG/M
3300030969\|Ga0075394_11438596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1480	Open in IMG/M
3300031231\|Ga0170824_106843767	Not Available	580	Open in IMG/M
3300031231\|Ga0170824_118444747	All Organisms → cellular organisms → Bacteria	3325	Open in IMG/M
3300031446\|Ga0170820_12706574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300031446\|Ga0170820_15271876	Not Available	684	Open in IMG/M
3300031446\|Ga0170820_17612477	Not Available	510	Open in IMG/M
3300031474\|Ga0170818_103897311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300031754\|Ga0307475_10228331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.07%
Host-Associated	Host-Associated	9.22%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.11%
Plants	Host-Associated → Plants	9.22%
Aquatic	Environmental → Aquatic	4.96%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.51%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.84%
Freshwater	Environmental → Aquatic → Freshwater	2.13%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.09%
Loam	Environmental → Terrestrial → Soil → Loam	13.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.09%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.42%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.13%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.42%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.71%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.06%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.84%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.13%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.71%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_04146710	2170459016	Switchgrass, Maize And Mischanthus Litter	VGSLLAAFVITFTVAGSVTLGIALAYTSVLALLHAFARSARQPQPLVLLHSQSHAGGD
INPhiseqgaiiFebDRAFT_1051299912	3300000364	Soil	LGSLLVAFVVTFTVAGSLALGIALAYSGVIVLLHGFAYSSRKPAPRLVLVTSENHASGD*
C688J18823_110373851	3300001686	Soil	VGSLLVASVLTFTVAGSVALGITLAYTGVIALLHALADRAHKPRPALVLVHSQGHASGD*
JGI25617J43924_100820841	3300002914	Grasslands Soil	LIAFVVTFTVAGSLALGIALAYSSVLALLHAFAYSSRKPATRLVLVASENHASGD*
soilH2_100317898	3300003324	Sugarcane Root And Bulk Soil	LPQLDRRESGPNLGSLLVAFVISFTVAGSFVLGIAAAYTSVIALLHAFAQRNRKSSPSLVLMTTQTHVSGD*
Ga0063454_1009623171	3300004081	Soil	LGSLLVAFVVTFTVAGSVALGVTAAYASVIALLHAFASQSQKPRPAVIFAPSQQQVSGD*
Ga0062386_1004533232	3300004152	Bog Forest Soil	LGTLLVAFVVTFTVAGSFALGIILAYSSILALLHAFAHNSRKPQPTLVLVPTQNQVSGD*
Ga0062386_1004732862	3300004152	Bog Forest Soil	LGSLLVVFVVTFAVAGSLALGIALAYSSVILLLHAFAHGSRKPAPVLVLTPRPGNVSGD*
Ga0063455_1005032171	3300004153	Soil	LVAFVVTFTVAGSVALGVTAAYVSVIALLHAFASQSQKTRSAVIFVPTQSQVSGD*
Ga0062589_1024152642	3300004156	Soil	GNLLAAFVLTFTVAGSFALGIAAAYTSVLALLHAFAHSSRKPAPALVLVHSQGQVSGD*
Ga0062595_1001918132	3300004479	Soil	LGNLLAAFVLTFTVAGSFALGIAAAYTSVLALLHAFAHSSRKPAPALVLVHSQGQVSGD*
Ga0062595_1002397362	3300004479	Soil	LIAFVITFTVTGSVALGIALAYTSVLGLLHAFAQSTRKPQPAMVLAPSQTHLSGD*
Ga0066673_100028152	3300005175	Soil	LGSLLVASVLTFTVAGSVALGITLAYTSVLALLHAFAHRTQKPRPALVLVHSQSHASGD*
Ga0066679_100479362	3300005176	Soil	LGSLLIAFVISFTVAGSMALGIAATYTSVLGLLHAFAYSSRKPQPALVLVHTQSHASGD*
Ga0066688_106863382	3300005178	Soil	VAGSFVLGIAVAYTGVLALLHAFAHSTRKPAPSLVLVHSQIQSSGD*
Ga0066684_103862262	3300005179	Soil	LAAFVLTFTVVGSFVLGIAVAYTGVLALLHAFAHSSRKPTPALVLVHSQIQSSGD*
Ga0066671_107279521	3300005184	Soil	LIKPPGQRESGPIVGSLLVAFVVTFTVTGSVALGIGLAYTSVLGLLHAFAYNTRKPQRALVLATSQTQISGD*
Ga0066388_1009447111	3300005332	Tropical Forest Soil	QRESGPNLGNLLAAFVLTFTVAGSFVLGIAAAYTSVLALLHAFAYSSRKPAPPLVLVHSQSQASGD*
Ga0066388_1019153812	3300005332	Tropical Forest Soil	MRRESGPNLGSLLVAFVITFTVTGSVVLGIALAYTSVLGLLHAFAQRSRAPKPSLLLASTQTQASGD*
Ga0070680_1012782882	3300005336	Corn Rhizosphere	LQEKDRRESGPHVGSLLVAFVVTFTAAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD*
Ga0070709_100191985	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	TFTVAGSFAFGIAVAYSGVLALLHAFARSTRKPAPALILVHSQSQLSGD*
Ga0070709_100271993	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VGSLLIAFVITFTVTGSVALGIALAYTSVLGLLHAFAQSTRKPQPAMVLAPSQTHLSGD*
Ga0070714_1007156311	3300005435	Agricultural Soil	SEREGRPNLGSLLVAFVVTFTVAGSVALGVTAAYASVIALLHAFASQSQKPRPAVIFAPSHHQVSGD*
Ga0070714_1017717532	3300005435	Agricultural Soil	LGSLLVVFVITFTVAASFALGIAVAYTCFIGLLHAFAYSSRKPAPALVLARSQSQASGD*
Ga0070711_1007967432	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RESGPNVGSLLVAFVVTFTVAGSVALGISLAYTSVLALLHALAHRTQKQRPALVLVHSQGHASGD*
Ga0070708_1005832822	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LGNLLVAVVLSFTVAGSLALGIAAAYTMVIALLHAFAYSSRKPAPSLVLATSQTQISGD*
Ga0070681_101253432	3300005458	Corn Rhizosphere	VGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD*
Ga0070707_1003141782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LGSLLIAFVVTFTVAGSLALGIALAYSTVLALLHVFAYSSRKPATRLVLVASENHASGD*
Ga0070741_1000125449	3300005529	Surface Soil	LGSLLIAFVVTFTVAGSVALGVTAAYASVIALLHAFAHSSSRPKPSLVLVPTQNQISGD*
Ga0070741_100268826	3300005529	Surface Soil	LGSLLAAFIIAFTVAGSLALGITLAYSSVLALLHAFAHNSRKPEPALVLAPSQGHLGGD*
Ga0066697_103122402	3300005540	Soil	MVSKDPRESGPNLGSLLVASVLTFTVAGSVALGITLAYTSVLALLHAFADRTQKPRPALVLVHSQSHASGD*
Ga0070733_104963832	3300005541	Surface Soil	LESLLVAFVVTFTVAGSLALGIALAYFSTLALLHAFAYNSRKAAPSLVLVARGNHASGD*
Ga0070732_1000012957	3300005542	Surface Soil	VGQNVGSILIAFVITFTVTGSLVLGIALAYTSVLGLLHAFAYNTRKPRPALVLVPTQTQAGAD*
Ga0070732_109740441	3300005542	Surface Soil	LLIAFVITFTVTGSVALGIALAYTSVLGLLHAFAQSTRKPQPAPVLVFSQTHVSGD*
Ga0066701_108747672	3300005552	Soil	LGSLLVAFVVTFTVAGSVALGVTAAYAGVIALLHAFASQSQKPRPAVIFAPSQQQVSGD*
Ga0066700_101210943	3300005559	Soil	TVAGSFVLGIAVAYTGVLALLHAFAHSSRKPAPALVLVLSQIQSSGD*
Ga0066670_103186962	3300005560	Soil	RESGPIVGSLLVAFVVTFTVTGSVALGIGLAYTSVLGLLHAFAYNTRKPQRALVLATSQTQISGD*
Ga0068855_1004631482	3300005563	Corn Rhizosphere	LQEKDRRESGPHVGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD*
Ga0070664_1012694112	3300005564	Corn Rhizosphere	KDRRESGPHVGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD*
Ga0066693_100118552	3300005566	Soil	MVSKDPRESGPNLGSLLVASVLTFTVAGSVALGITLAYTSVLALLHAFAHRTQKPRPALVLVHSQSHASGD*
Ga0066705_106978342	3300005569	Soil	LGSLLIAFVISFTVAGSMALGIAAAYTSVLGLLHAFAYSSRKPQPALVLVHTQSHASGD*
Ga0066694_102816282	3300005574	Soil	LGSLLVASVLTFTVAGSVALGITLAYTSVLALLHAFADRTQKPRPALVLVHSQSHASGD*
Ga0066694_104406051	3300005574	Soil	LGSLLAAFVLTFTVAGSFVLGIAVAYTGVLALLHAFAHSTRKPAPSLVLVHSQIQSSGD*
Ga0066708_101902021	3300005576	Soil	IRSQSVGKSCWQRESGPNLGSLLAAFVLTFTVAGSFVLGIAVAYTGVLALLHAFAHSSRKPAPALVLVHSQIQSSGD*
Ga0066691_105119392	3300005586	Soil	FTVAGSVALGIALAYTSVLGLLHAFAYSSRRTQPALVLVPTQTHVSGD*
Ga0066654_107666852	3300005587	Soil	RESGPNVGSLLVAFVVSFTVAGSLALGISLAYTSVLALLHAFAHRTQKPRPALVLVHSQSVSGD*
Ga0066788_100108031	3300005944	Soil	DRQLYRRESGRNLGTLLVAFVVTFTVAGCFALGIVLAYSSILALLHAFASNSSKPQPALVLIPTQNQVSGD*
Ga0080027_100188172	3300005993	Prmafrost Soil	VTFTVAGCFALGIVLAYSSILALLHAFASNSSKPQPALVLIPTQNQVSGD*
Ga0066789_1000003727	3300005994	Soil	LVAFVVSFTVAGSLALGIALAYTAFLALLHAFAENSRKPQPTLVLVPTQNQVSGD*
Ga0070717_118355402	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	NPLGSRWQRESGPNLGNLLAAFVLTFTVAGSFAFGIAVAYSGVLALLHAFARSTRKPAPALILVHSQSQLSGD*
Ga0066696_104132761	3300006032	Soil	LGNLLAAFVLTFTVAGSFAFGIAVAYSGVLALLHAFARSARRPAPALVLVHSQSQLG
Ga0066652_1002764232	3300006046	Soil	VGSLLVASVLTFTVAGSVALGITLAYTSVLALLHAFADRTQKPRPALVLVHSQSHASGD*
Ga0066652_1008453381	3300006046	Soil	LGSLLVAFVVTFTVAGALAFGICAAYTCVLALLQAFAYSSRKPQPSLVLVASQNHSSGD*
Ga0070715_100670431	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQSVGRSYWARRESGRNVGSLLIAFVITFTVTGSVALGIALAYTSVLGLLHAFAQSTRKPQPAMVLAPSQTHLSGD*
Ga0066658_107654812	3300006794	Soil	MQPLIKPPGQRESGPIVGSLLVAFVVTFTVTGSVALGIALAYTSVLGLLHAFAQSTRKPQPAMVLAPSQTHLGGD*
Ga0066658_107961061	3300006794	Soil	EGRPNLGSLLVAFVVTFTVAGSVALGVTAAYVSVIALLHAFASQSQKPRPAVIFAQSQQQVSGD*
Ga0066665_116228382	3300006796	Soil	LVVFVITFTVAGSVAFGIALAYTSVLGLLHAFAYSSRRPQPALVLAATQTHVSGD*
Ga0066659_110589002	3300006797	Soil	GSLLVAFVVTFTVTGSVALGIGLAYTSVLGLLHAFAYNTRKPQRALVLATSQTQISGD*
Ga0066660_113491562	3300006800	Soil	LGSLLVAFVISFTVAGSMALGIAAAYTSVLGLLHAFGYSSRKPQPALVLVHTQSHASGD*
Ga0066660_116206191	3300006800	Soil	GQRESGPIVGSLLVAFVVTFTVTGSVALGIGLAYTSVLGLLHAFAYNTRKPQRALVLATSQTQISGD*
Ga0079221_104998432	3300006804	Agricultural Soil	VITFTVAGSVTLGIALAYMSVLALLQDFARSTRQPQPLVLMHSQSHAGGD*
Ga0079221_109240601	3300006804	Agricultural Soil	VGTLLAAAVLSLTVAGSVTLGITLAYSSVLALLHAFAHSTRKPESAPALVLVHSQSQAGAD*
Ga0079220_112653572	3300006806	Agricultural Soil	GRRESGPNVGSLFVAAVMILTVAGSVVLGISLAYTSVLALLHAFAARNRAPKPALVLVHSESHVGAD*
Ga0075425_10000099117	3300006854	Populus Rhizosphere	LGNLLAAFVLTFTVAGSFALGIAAAYTTVLALLHAFAHSSRKPAPALVLVHSQGQVSGD*
Ga0073928_100108832	3300006893	Iron-Sulfur Acid Spring	VTFTVAGSLALGIALAYSSVLALLHAFAYSSRKPATRLVLVASENHASGD*
Ga0073928_104977992	3300006893	Iron-Sulfur Acid Spring	LGTLLVAFVVTFTVAGCFALGIALAYSSILALLHAFAYNSSQPRSALVLVPTQNQASGD*
Ga0075424_1023812311	3300006904	Populus Rhizosphere	VGRGYSVQRESGRNVGSLLIAFVITFTVTGSVALGIALAYTSVLGLLHAFAQSTRKPQPAMVLAPSQTHLSGD*
Ga0075436_1014315113	3300006914	Populus Rhizosphere	GRPNLGSLLVAFVVTFTVAGSVALGVTAAYASVIALLHAFASQSQKPRPAVIFAPSHHQVSGD*
Ga0066710_1007754461	3300009012	Grasslands Soil	LGSLLVASVLTFTVAGSVALGITLAYTSVLALLLAFADRTQKPRPALVLVHSQSHASGD
Ga0066710_1041550192	3300009012	Grasslands Soil	LLVAFVITFTVAGSLALGIALAYTSVLGLLQAFAYSSRKPEPAMVLAATATHASGD
Ga0099828_110923602	3300009089	Vadose Zone Soil	LLIAFVVTFTVAGSLALGIALAYSSVLALLHAFAYSSRKPTPRLVLVASENHASGD*
Ga0066709_1025019002	3300009137	Grasslands Soil	LLVAFVITFTVAGSLALGIALAYTSVLGLLQAFAYSSRKREPAMVLAATATHASGD*
Ga0066709_1036852651	3300009137	Grasslands Soil	LLVAFVITFTVAGSLALGIALAYTSVLGLLQAFAYSSRKPEPAMVLAATATHASGD*
Ga0105241_100082746	3300009174	Corn Rhizosphere	LPAALQEKDRRESGPHVGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD*
Ga0105241_103088313	3300009174	Corn Rhizosphere	AGRRESGPNVGSLLTAVVMIFTVAGSVFLGITLAYTSVLALLHAFAARDLAPKPALVLVPTQSQVGGD*
Ga0126373_112500502	3300010048	Tropical Forest Soil	VSSLLVAFVVTFTVAGSLALGITLAYTSVLVLLHAVANRSRQPRPSLVLVHGQTQLSGD*
Ga0126373_130012242	3300010048	Tropical Forest Soil	NVSSLLVAFVVTFTVAGSLALGIALAYTSVLALLHAFADRNRQPRPSFVLVHTQSQLSGD
Ga0126378_103319433	3300010361	Tropical Forest Soil	LIAFVITFTVTGSMVLGIALAYTGVLGLLYAFRHSTRKPRPALVLLPTTQTECSGD*
Ga0134128_107122132	3300010373	Terrestrial Soil	VITFTVAGSVTLGIALAYTSVLALLHAFARSARQPQPLVLMHSQSHAGGD*
Ga0126381_1030666311	3300010376	Tropical Forest Soil	LPAADYEAFDRQESGPNVSSLLVAFVVTFTVAGSLALGIALAYTSVLALLHAFADRNHQPRPSLVLVHSQSPMSGD*
Ga0126381_1043904002	3300010376	Tropical Forest Soil	VSSLLVAFVVTFTVAGSLALGIALAYTSVLALLHAFADRNRQPRPSFVLVHTQSQLSGD*
Ga0137776_15922542	3300010937	Sediment	VSSLLVAFVVTFTVAGSLALGIALAYTGVLVLLHAFADRSHQPRPSLVLVHGQTQLSGD*
Ga0137391_100358912	3300011270	Vadose Zone Soil	MLLGRRESGPNLGSLLIAFVVTFTVAGSLALGIALAYSSVLALLHAFAYSSRKPATRLVLVASENHASGD*
Ga0120139_10970911	3300012019	Permafrost	AFVVTFTVAGSLALGIALAYSSVLALLHAFAYNSRKPATRLVLVASENHASGD*
Ga0137383_100221382	3300012199	Vadose Zone Soil	LGSLLIAFVISFTVAGSMALGIAAAYTSVLGLLHAFAYSSRKPQRALVLVHTQSHASGD*
Ga0137382_109518762	3300012200	Vadose Zone Soil	LGSLLVASVLTFTVAGSVALGITLAYTSVLALLLAFADRTQKPRPALVLVHSQSHASGD*
Ga0137365_111040592	3300012201	Vadose Zone Soil	FTVAGSFVLGIAVAYTGVLALLHAFAHSTRKPAPALVLVHSQIQSSGD*
Ga0137362_110867492	3300012205	Vadose Zone Soil	GSLLIAFVISFTVAGSMALGIAATYTSVLGLLHAFAYSSRKPQPALVLVHTQSHASGD*
Ga0137376_108787521	3300012208	Vadose Zone Soil	VASVLTFTVAGSVALGITLAYTSVLALLHAFAHRTQKPRPALVLVHSQSHASGD*
Ga0137378_116761692	3300012210	Vadose Zone Soil	WQRESGPNLGSLLAAFVLTFTVAGSFALGIAVAYTGVLALLHAFAHSTRKPAPALVLVHSQIQSSGD*
Ga0137387_101857703	3300012349	Vadose Zone Soil	LGSLLVAFVISFTVAGSMALGIAAAYTSVLGLLHAFAYSSRKPQPALVLVHTQSHASGD*
Ga0137384_104509212	3300012357	Vadose Zone Soil	TFTVAGSLALGIALAYTGVLGLLHAFAYHTRKPAPALVLVASQNHASGD*
Ga0137390_115880601	3300012363	Vadose Zone Soil	VAGSLALGIALAYTGVLGLLHAFAYRSRKPAPALVLVTSQNHASGD*
Ga0134054_11722292	3300012390	Grasslands Soil	LGSLLVAFVVTFTVAGSVALGVTAAYASVIALLHAFASQSQKPRPAVIFVPSQHQVSGD*
Ga0150984_1230750461	3300012469	Avena Fatua Rhizosphere	VAGSVALGVTAAYVSVIALLHAFASQSQKTRSAVIFVPTQHQVSGD*
Ga0137373_104437421	3300012532	Vadose Zone Soil	GRRESGPNVGSLLVAAVMTLTVAGSVALGITLAYTSVLALLHAFAARNHRTPAPALVLVHSQSQGD*
Ga0137395_102123173	3300012917	Vadose Zone Soil	VLSFTVAGSLALGIAAAYTMVIGLLHAFAYSSRKPSPALVLATSQPQISGD*
Ga0137407_106762791	3300012930	Vadose Zone Soil	AFVVTFTVAGSLALGIILAYSSVIVLLHAFAYSTRKPAPRLVLVASENHASGD*
Ga0126375_117828632	3300012948	Tropical Forest Soil	LLAAFVLTFTVAGSVVLGIAVAYTGVLALLHAFAHNNRKPAPPLVLIHSQSQASGD*
Ga0164301_105597231	3300012960	Soil	PNLGNLLAAFVLTFTVAGSFALGIAAAYTSVLALLHAFAHSSRKPAPALVLVHSQGQVSGD*
Ga0164302_101731122	3300012961	Soil	VQEKDRRESGPHVGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVRSQSHASGD*
Ga0134110_102436031	3300012975	Grasslands Soil	MVSKDPRESGPNLGSLLVASVLTFTVAGSVALGITLAYTSVLALLLAFADRTQKPRPALVLVHSQSHASGD*
Ga0134087_105680961	3300012977	Grasslands Soil	FVVSFTVAGSVALGVTTAYVSVIALLHAFANRSPKPQPAILFVPSQHQVSGD*
Ga0164304_116331081	3300012986	Soil	FTVAGSFALGIAAAYTSVLALLHAFAHSSRKPTPALVLVHSQGQVSGD*
Ga0157373_103490171	3300013100	Corn Rhizosphere	REGRPNLGSLLVAFVVTFTVAGSVALGVTAAYVSVLALLHAFASQSQKPRPAVIFAPTQPQVSGD*
Ga0157378_126943271	3300013297	Miscanthus Rhizosphere	IRWLPAALQEKDRRDSGPHVGSLLVAFVVNFNVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD*
Ga0157372_101441592	3300013307	Corn Rhizosphere	VITFTVAGSVTLGIALAYTSVLALLHAFARSARQPQPLVLLHSQSHAGGD*
Ga0157372_116502101	3300013307	Corn Rhizosphere	TFTVAGSVTLGFALAYTSVLALLHAFARSARQPQPLVLMHSQSHAGGD*
Ga0120111_10812242	3300013764	Permafrost	LLIAFVVTFTVAGSLALGIALAYSSVLALLHAFAYSSRKPATRLVLVASENHASGD*
Ga0120132_10081422	3300013832	Permafrost	LLVVFVITFTVAASFALGITVAYTCFIGLLHAFAYSSRKPAPALVLARSQSQASGD*
Ga0182007_102035462	3300015262	Rhizosphere	VISFTVAGSVALGIVLAYSSVLALLHAFAHSTRKPQPALILVHSQSSGD*
Ga0137403_106159411	3300015264	Vadose Zone Soil	NLGTLLAAFVLTFTVAGSFAFGIAVAYSGVLALLHAFAHTTRRSAPALVLVHSQSQASGD
Ga0134073_101461432	3300015356	Grasslands Soil	RPNLGSLLVAFVVTFTVAGSVALGVTAAYASVIALLHAFASQSQKPRPAVIFAPSQQQVSGD*
Ga0066662_105596312	3300018468	Grasslands Soil	LIKPPGQRESGPIVGSLLVAFVVTFTVTGSVALGIGLAYTSVLGLLHAFAYNTRKPQRALVLATSQTQISGD
Ga0193731_11736081	3300020001	Soil	NLGNLLVAFVVTFTVAGSLALGIAAAYTCVIGLLHAFAYSSRKSAPALVLATTQTHVSGD
Ga0210407_1000028552	3300020579	Soil	LLVAFVVTFTVAGCFALGIVLAYSSILALLHAFAYNSRRPQPALVLVPTQNQASGD
Ga0210403_110630781	3300020580	Soil	PNLGTLLVAFVVTFTVAGCFALGIVLAYSSILALLHAFAYNSRRPQPALVLVPTQNQASG
Ga0210401_103171263	3300020583	Soil	LLVAFVVTFTVAGCFALGIALAYSSILALLHAFAYNSRRSQPALVLVPTQNQASGD
Ga0193719_104725632	3300021344	Soil	LGLLDRRESGPNLGSLLVVFVITFTVAGSVALGIAVAYTSVIGLLHVFAYSSRKPSPALVLVHT
Ga0213882_102832452	3300021362	Exposed Rock	AFDRRKSGPNVSSLLVAFVLTFTVAGSLILGIALAYTGVLALLHAFADRRQPRPSLLLVHTQSQLSGD
Ga0126371_107963221	3300021560	Tropical Forest Soil	SLLIAFVITFTVTGSMILGIALAYTSVLGLLHAFGHSSRKPRPALVLVPTQTQAGGH
Ga0212123_107339131	3300022557	Iron-Sulfur Acid Spring	LGTLLVAFVVTFTVAGCFALGIALAYSSILALLHAFAYNSSQPRSALVLVPTQNQASGD
Ga0207663_105670261	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD
Ga0207664_114829702	3300025929	Agricultural Soil	HVGSLLVAFVVTFTVAGSVVLGITLAYTSVLALLHAFAHRAQKPRPALVLVHSQSHASGD
Ga0209890_100052342	3300026291	Soil	LLVAFVVSFTVAGSLALGIALAYTAFLALLHAFAENSRKPQPTLVLVPTQNQVSGD
Ga0209470_11114852	3300026324	Soil	LGSLLVAFVVTFTVAGSVALGVTAAYASVIALLHAFASQSQKPRPAVIFAPSQQQVSGD
Ga0209810_12366962	3300027773	Surface Soil	LIAFVVTFTVAGSVALGVTAAYASVIALLHAFAHSSSRPKPSLVLVPTQNQISGD
Ga0209656_103963261	3300027812	Bog Forest Soil	VTGCCAESIESDRRESGTNLGSLLVVFVVTFAVAGSLALGIALAYSSVILLLHAFAHGSRKPAPVLVLTPRPGNVSGD
Ga0209580_10000010103	3300027842	Surface Soil	LVVAAGSDGKVGQNVGSILIAFVITFTVTGSLVLGIALAYTSVLGLLHAFAYNTRKPRPALVLVPTQTQAGAD
Ga0209701_107250571	3300027862	Vadose Zone Soil	AGSLALGIALAYSSVLALLHAFAYSSRKPATRLVLVASENHASGD
Ga0209167_101287802	3300027867	Surface Soil	LESLLVAFVVTFTVAGSLALGIALAYFSTLALLHAFAYNSRKAAPSLVLVARGNHASGD
Ga0209167_103967431	3300027867	Surface Soil	LVAFVVTFTVAGSLALGIVLAYSSVLALLHAFAYSSRKPVPRLVLVASENHASGD
Ga0209590_108191251	3300027882	Vadose Zone Soil	RREGGPNLGSLLVVFVITFTVAGSVALGIALAYTSVLGLLHAFAYSSRKPQPALVLAPTQTHASGD
Ga0075394_114385964	3300030969	Soil	VAFVVSFTVAGSLALGIALAYTTFLALLHAFAHSSPKPAPRLVLVSSETHASGD
Ga0170824_1068437672	3300031231	Forest Soil	VVFVITFTVAASFALGITVAYTCFIGLLHAFAYSSRKPAPALVLARSHKQ
Ga0170824_1184447474	3300031231	Forest Soil	VGSLLVAFVVSFTVAGSVALGISLAYTSVLALLHAFAHRTPKPRPALVLVHSQGHASGD
Ga0170820_127065742	3300031446	Forest Soil	LVAFVVSFTVAGSVALGISLAYTSVLALLHAFAHRTPKPRPALVLVHSQGHASGD
Ga0170820_152718762	3300031446	Forest Soil	LGSLLVAFVVTFTVAGSLALGIALAYSSVIALLHAFAYSSRKSTPRLVLIASGNHASGD
Ga0170820_176124772	3300031446	Forest Soil	LVVFVITFTVAASFALGIAVAYTCFIGLLHAFAYSSRKPAPALVLARSQSQASGD
Ga0170818_1038973112	3300031474	Forest Soil	FTVAASFALGIAVAYTCFIGLLHAFAYSSRKPAPALVLARSQSQASGD
Ga0307475_102283313	3300031754	Hardwood Forest Soil	PDEHESGPNLGSLLIAFVVTFTVAGSLALGIALAYSSVIALLHAFAYSSRKPAPRLVLVASENHASGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053605

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences