Metagenome / Metatranscriptome Family F053504

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053504
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	71 residues
Representative Sequence	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Number of Associated Samples	124
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.84 %
% of genes near scaffold ends (potentially truncated)	25.53 %
% of genes from short scaffolds (< 2000 bps)	78.72 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.582 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (34.043 % of family members)
Environment Ontology (ENVO)	Unclassified (42.553 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (30.496 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.53% β-sheet: 0.00% Coil/Unstructured: 39.47%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF12833	HTH_18	12.77
PF10114	PocR	10.64
PF04041	Glyco_hydro_130	7.09
PF00011	HSP20	2.13
PF00118	Cpn60_TCP1	0.71
PF00486	Trans_reg_C	0.71
PF13520	AA_permease_2	0.71
PF13378	MR_MLE_C	0.71
PF01471	PG_binding_1	0.71
PF13439	Glyco_transf_4	0.71
PF07638	Sigma70_ECF	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	7.09
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.13
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.58 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	27.66 %
Unclassified	root	N/A	1.42 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26.95 %
Unclassified	root	N/A	1.42 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	14.18 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	8.51 %
Unclassified	root	N/A	1.42 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	14.18 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	8.51 %
Unclassified	root	N/A	1.42 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	14.18 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	8.51 %
Unclassified	root	N/A	1.42 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	14.18 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	4.26 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.42 %
Unclassified	root	N/A	1.42 %
Roseimicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	14.18 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4.26 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.42 %
Unclassified	root	N/A	1.42 %
Roseimicrobium gellanilyticum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → Roseimicrobium gellanilyticum	0.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16481720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3161	Open in IMG/M
2088090014\|GPIPI_17379477	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
2166559005\|cont_contig85938	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300000559\|F14TC_100224550	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300000881\|JGI10215J12807_1168941	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300000953\|JGI11615J12901_12456292	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300000955\|JGI1027J12803_100079482	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300000956\|JGI10216J12902_114861068	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300001139\|JGI10220J13317_10168177	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300002899\|JGIcombinedJ43975_10003958	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300002899\|JGIcombinedJ43975_10045531	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005093\|Ga0062594_101007943	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005171\|Ga0066677_10063966	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300005176\|Ga0066679_10148007	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300005289\|Ga0065704_10236250	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005290\|Ga0065712_10108624	All Organisms → cellular organisms → Bacteria	1871	Open in IMG/M
3300005290\|Ga0065712_10549743	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005294\|Ga0065705_10042015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1249	Open in IMG/M
3300005295\|Ga0065707_11154892	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005467\|Ga0070706_101177125	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005535\|Ga0070684_102041866	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005561\|Ga0066699_11233392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	513	Open in IMG/M
3300005564\|Ga0070664_101756409	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300005576\|Ga0066708_10694365	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005614\|Ga0068856_102439814	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006173\|Ga0070716_100426130	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300006844\|Ga0075428_101854027	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300009100\|Ga0075418_11826588	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300009137\|Ga0066709_100538880	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300010371\|Ga0134125_11026218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	904	Open in IMG/M
3300010373\|Ga0134128_12141587	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300010999\|Ga0138505_100042028	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300011003\|Ga0138514_100002666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2376	Open in IMG/M
3300012198\|Ga0137364_10183975	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300012199\|Ga0137383_10003720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	9608	Open in IMG/M
3300012200\|Ga0137382_10535225	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012201\|Ga0137365_10006444	All Organisms → cellular organisms → Bacteria	9376	Open in IMG/M
3300012203\|Ga0137399_10338231	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300012204\|Ga0137374_10119464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2429	Open in IMG/M
3300012204\|Ga0137374_10181241	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300012354\|Ga0137366_10096914	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300012355\|Ga0137369_10153500	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300012356\|Ga0137371_10148568	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300012685\|Ga0137397_10062133	All Organisms → cellular organisms → Bacteria	2695	Open in IMG/M
3300012897\|Ga0157285_10116904	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	755	Open in IMG/M
3300012912\|Ga0157306_10211054	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012916\|Ga0157310_10406998	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300012925\|Ga0137419_10295613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1236	Open in IMG/M
3300012944\|Ga0137410_11012105	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300013296\|Ga0157374_10833690	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300013308\|Ga0157375_10250278	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1933	Open in IMG/M
3300015077\|Ga0173483_10516992	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300015371\|Ga0132258_13832638	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300015372\|Ga0132256_100414507	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300015372\|Ga0132256_102108538	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300018000\|Ga0184604_10002551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2919	Open in IMG/M
3300018027\|Ga0184605_10043307	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300018027\|Ga0184605_10069747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1521	Open in IMG/M
3300018028\|Ga0184608_10228109	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	818	Open in IMG/M
3300018028\|Ga0184608_10513605	Not Available	512	Open in IMG/M
3300018061\|Ga0184619_10000952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	10032	Open in IMG/M
3300018066\|Ga0184617_1009945	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300018071\|Ga0184618_10147163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300018072\|Ga0184635_10006608	All Organisms → cellular organisms → Bacteria	3823	Open in IMG/M
3300018076\|Ga0184609_10164623	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300019279\|Ga0184642_1662362	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300019356\|Ga0173481_10304285	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300019356\|Ga0173481_10888928	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300019361\|Ga0173482_10581127	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300019362\|Ga0173479_10053491	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300019866\|Ga0193756_1017765	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300019867\|Ga0193704_1044760	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300019868\|Ga0193720_1014103	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300019877\|Ga0193722_1008823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Roseimicrobium → Roseimicrobium gellanilyticum	2557	Open in IMG/M
3300019879\|Ga0193723_1001615	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	8645	Open in IMG/M
3300019881\|Ga0193707_1009798	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3259	Open in IMG/M
3300019881\|Ga0193707_1043541	All Organisms → cellular organisms → Bacteria	1445	Open in IMG/M
3300019886\|Ga0193727_1107247	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300019888\|Ga0193751_1020252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3292	Open in IMG/M
3300019890\|Ga0193728_1139373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1079	Open in IMG/M
3300019996\|Ga0193693_1019650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1264	Open in IMG/M
3300019997\|Ga0193711_1009168	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300020002\|Ga0193730_1004714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3756	Open in IMG/M
3300020002\|Ga0193730_1016517	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300020006\|Ga0193735_1130054	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300020008\|Ga0193757_1006216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1097	Open in IMG/M
3300020010\|Ga0193749_1087520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300020012\|Ga0193732_1024769	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300020018\|Ga0193721_1000272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	15506	Open in IMG/M
3300020022\|Ga0193733_1003500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4534	Open in IMG/M
3300020022\|Ga0193733_1041055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1307	Open in IMG/M
3300020581\|Ga0210399_11514749	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300021168\|Ga0210406_10478309	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300021178\|Ga0210408_10106863	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300021344\|Ga0193719_10032465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2253	Open in IMG/M
3300021418\|Ga0193695_1004721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2557	Open in IMG/M
3300022195\|Ga0222625_1205278	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300022534\|Ga0224452_1021603	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300022756\|Ga0222622_10051316	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300022756\|Ga0222622_10370450	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300025271\|Ga0207666_1083124	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300025315\|Ga0207697_10002505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	9475	Open in IMG/M
3300025910\|Ga0207684_10113725	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300025915\|Ga0207693_10811987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300025932\|Ga0207690_11018077	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300025972\|Ga0207668_11715172	Not Available	567	Open in IMG/M
3300026078\|Ga0207702_11368562	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300026315\|Ga0209686_1121386	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300026552\|Ga0209577_10010586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	8375	Open in IMG/M
3300026555\|Ga0179593_1182195	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300026688\|Ga0208071_100844	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300026693\|Ga0208709_101337	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300026791\|Ga0208072_106577	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300026861\|Ga0207503_1014024	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027526\|Ga0209968_1081371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300027617\|Ga0210002_1039416	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300027873\|Ga0209814_10486807	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300027876\|Ga0209974_10075191	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300028708\|Ga0307295_10144619	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300028715\|Ga0307313_10045296	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300028716\|Ga0307311_10186945	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300028791\|Ga0307290_10255559	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300028793\|Ga0307299_10030981	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300028796\|Ga0307287_10310536	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300028814\|Ga0307302_10155045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1110	Open in IMG/M
3300028878\|Ga0307278_10007746	All Organisms → cellular organisms → Bacteria	5077	Open in IMG/M
3300031081\|Ga0308185_1015246	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300031099\|Ga0308181_1059929	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300031231\|Ga0170824_113377466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1155	Open in IMG/M
3300031231\|Ga0170824_119887291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2380	Open in IMG/M
3300031446\|Ga0170820_15705726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300031716\|Ga0310813_10872494	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300031720\|Ga0307469_10727408	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031720\|Ga0307469_11908946	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	575	Open in IMG/M
3300032180\|Ga0307471_101916201	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300032421\|Ga0310812_10075983	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300033412\|Ga0310810_10096264	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300033412\|Ga0310810_10133682	All Organisms → cellular organisms → Bacteria	2908	Open in IMG/M
3300033412\|Ga0310810_10794250	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300033412\|Ga0310810_11164490	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300033475\|Ga0310811_10817409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	865	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.11%
Host-Associated	Host-Associated	14.18%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.47%
Plants	Host-Associated → Plants	14.18%
Aquatic	Environmental → Aquatic	10.64%
Modeled	Engineered → Modeled	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.05%
Sediment	Environmental → Aquatic → Sediment	9.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.09%
Freshwater	Environmental → Aquatic → Freshwater	1.42%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.42%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.22%
Loam	Environmental → Terrestrial → Soil → Loam	7.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.84%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.42%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.42%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.51%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.42%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	34.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.09%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.13%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.13%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.42%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300019996	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026688	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN589 (SPAdes)	Environmental	Open in IMG/M
3300026693	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN595 (SPAdes)	Environmental	Open in IMG/M
3300026791	Grasslands soil microbial communities from Kansas, USA that are Nitrogen fertilized - NN591 (SPAdes)	Environmental	Open in IMG/M
3300026861	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)	Environmental	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03521970	2088090014	Soil	MHVIQFREIMRDAEVAHAIHPIIFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTNRYATNCPTKQRDLFQAT
GPIPI_00775060	2088090014	Soil	MHLIQFRQITRDAEVAHAIHPIVLKYLLTVEETTKALLVCGVSRAANVAQISTGSFLINKYATKHPTKQRDLF
cont_0938.00005550	2166559005	Simulated	MRDAEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTRNFLINKYATNRPTKQRDLFQAT
F14TC_1002245501	3300000559	Soil	MHLIQFREIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVARISTGSFLINKYATNRPTKQRDLFQAT*
JGI10215J12807_11689412	3300000881	Soil	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSYLTNRYATNRPTKQRELFQAT*
JGI11615J12901_124562921	3300000953	Soil	REIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVARISTGSFLINKYATNRPTKQRDLFQAT*
JGI1027J12803_1000794821	3300000955	Soil	MHEIQFREIMRDAEVAYAVHPIVLKYLLTVEETTKALIACGVPRAANVAQISTDSFLNNEYATNRPTKQRDLFQAT*
JGI10216J12902_1148610682	3300000956	Soil	MHLIQFREITRDAEVAYAIHPIVLKYLLTVEETTKALNACGVPRAANVARISTGSFLDNEYAASRPTKQRDLFQTT*
JGI10220J13317_101681772	3300001139	Soil	IQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSYLTNRYATNRPTKQRELFQAT*
JGIcombinedJ43975_100039583	3300002899	Soil	MHEIQFREIMRDAEVAYAVHPIVLKYLLTVEETTKALIACGVPRAANVAQISSDSFLNNEYATNRPTKQRDLFQAT*
JGIcombinedJ43975_100455311	3300002899	Soil	MHLVQFREIMRDAEVAYVIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLINQYATNRPTKQRDLFQAT*
Ga0062594_1010079432	3300005093	Soil	MHLVQFREIVRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSSLINKYATNGPTKQRDLFQAT*
Ga0066677_100639662	3300005171	Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNRPTKQRDLFQAT*
Ga0066679_101480072	3300005176	Soil	MHLIQFCEIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNRPTKQRDLFQAT*
Ga0065704_102362502	3300005289	Switchgrass Rhizosphere	MHLIQFREIMRDAEVAYAIHPIVLKYLLIVEETTKAWLACGVSRSANVARISTGSFLINKYATNRPTKQRDLFQAT*
Ga0065712_101086243	3300005290	Miscanthus Rhizosphere	MHLVQFREIVRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTCSFLINKYATNRPAMQRDLFQAT*
Ga0065712_105497431	3300005290	Miscanthus Rhizosphere	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRPANVAQISTGSFLTNRYATNRPTKQRDLFQAT*
Ga0065705_100420151	3300005294	Switchgrass Rhizosphere	MHLIQFREIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT*
Ga0065707_111548921	3300005295	Switchgrass Rhizosphere	MHVIQFREIMRDAEVAYAIHQIVFKYLLTVKETTKALLECGVSRAANVAQISTGSFLINRYATNRPTKQRELFQAT*
Ga0070706_1011771251	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHLIQFREIMRDAEVACAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLVNKYATKRPTKQRDLFQAT*
Ga0070684_1020418661	3300005535	Corn Rhizosphere	MLVIQFREIMRDAEVAHAIRPIVFKYLLTAEETTKTLQECGVSRAANVAQICTGSFLAKRYATNRPTKQRDLFQAT*
Ga0066699_112333921	3300005561	Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNGPTKQRDLFQAT
Ga0070664_1017564091	3300005564	Corn Rhizosphere	MHVIQFREIMRDAEVAHAIRPIVFKYLLTAEETTKTLQECGVSRAANVAQICTGSFLAKRYATNRPTKQRDLFQAT
Ga0066708_106943651	3300005576	Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNRPTKQRDLF
Ga0068856_1024398142	3300005614	Corn Rhizosphere	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT*
Ga0070716_1004261302	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGRFLINKYATNRPTKQRDLFQAT*
Ga0075428_1018540271	3300006844	Populus Rhizosphere	QFREIMRDAEVAYAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLINQYATNRPTKQRDLFQAT*
Ga0075418_118265881	3300009100	Populus Rhizosphere	MRDAEVAYAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLINQYATNCPTKQRDLFQAT*
Ga0066709_1005388802	3300009137	Grasslands Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNRPTKQRGLFQAT*
Ga0134125_110262181	3300010371	Terrestrial Soil	MHVIQFREIVRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSSLINKYATNRPTKQRDLFQAT*
Ga0134128_121415871	3300010373	Terrestrial Soil	MRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT*
Ga0138505_1000420281	3300010999	Soil	MRDAEVAHAIHPIVLKYLLTVEETTKALLGCGVSRAANVAQISTGSFLINRYATNRPTNQRDLFQAT*
Ga0138514_1000026661	3300011003	Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLTCGVSRAANVAQISTGSSLINKYATNRPTKQCDLFQAA*
Ga0137364_101839753	3300012198	Vadose Zone Soil	MRDAEAAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISACSFLINKYATNRPAKQRDLFQAT*
Ga0137383_100037208	3300012199	Vadose Zone Soil	MGDAEVAYAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT*
Ga0137382_105352251	3300012200	Vadose Zone Soil	MRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLINRYATNCPTKQRDLFQAT*
Ga0137365_1000644413	3300012201	Vadose Zone Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT*
Ga0137399_103382313	3300012203	Vadose Zone Soil	MRDAEVAHAIHSIVLKYLLTVEERTKALLECGVSRAANVAQISPGNFLINKYATNRPTKQRDLFQAT*
Ga0137374_101194643	3300012204	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT*
Ga0137374_101812413	3300012204	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLAVEETTEALLACGVSRAANVAQISAGSFLINKYATNRPTKQRDLFQAT*
Ga0137366_100969141	3300012354	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGRFLINKYATNRPTKQRDLFQAT*
Ga0137369_101535001	3300012355	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFHINKYATNRPTKQRDLFQAT*
Ga0137371_101485682	3300012356	Vadose Zone Soil	MRDAEAAHAIHPIVLKYLMTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT*
Ga0137397_100621333	3300012685	Vadose Zone Soil	MRDAEVAHAIHPIALKYLLTVEETAKALLECGVSRAANVAQIGTGSFLINKYATNRSTKQRDLFQAT*
Ga0157285_101169041	3300012897	Soil	MRDAEVAYAIHPIVLKYLLTVGETTKALLECGVSRAANVAQISTGSYLTNRYATNRPTKQRDLF
Ga0157306_102110541	3300012912	Soil	MRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSYLTNRYATNRPTKQRELFQAT*
Ga0157310_104069981	3300012916	Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTCSFLINKYATNRPAMQRDLFQAT*
Ga0137419_102956131	3300012925	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLTVEETAKALLECGVSRAANVAQISPGNFLINKYATNRPTKQRD
Ga0137410_110121051	3300012944	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIGTGSFLINKYATNRSTKQRDLFQAT*
Ga0157374_108336901	3300013296	Miscanthus Rhizosphere	MRDAEVAHAIRPIVFKYLLTAEETTQTLPEFGVSRAANVAQICTGSFLAKRYATNRPTKQRDLFQA
Ga0157375_102502781	3300013308	Miscanthus Rhizosphere	DAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT*
Ga0173483_105169921	3300015077	Soil	RDAEVAYAIYPIVLKYLLTVEETTKALLACGVSRAANVAQISTGNFLINKYATNRPTKQRDLFQAT*
Ga0132258_138326381	3300015371	Arabidopsis Rhizosphere	MLVIQFREIMRDAEVAHAIRPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLAKRYATNRPTKQRDLFQAT*
Ga0132256_1004145072	3300015372	Arabidopsis Rhizosphere	MRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLAKRYATNRPTKQRDLFQAT*
Ga0132256_1021085382	3300015372	Arabidopsis Rhizosphere	MRDAEVAHAIHPIVFKYLLTAEETTKALQQCGVARAANVAQISTGSFLAKRYATNRPTKQRDLFQ
Ga0184604_100025512	3300018000	Groundwater Sediment	MHVIQFREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANIGQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0184605_100433074	3300018027	Groundwater Sediment	EVAHAIHPIVLKYLLTVEETTKALLECGVSRAANIGQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0184605_100697473	3300018027	Groundwater Sediment	MRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIRPSSLLINRYATNRPTKQRDSFQAT
Ga0184608_102281092	3300018028	Groundwater Sediment	MRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Ga0184608_105136051	3300018028	Groundwater Sediment	MQVIQFREMMQDAEVAQAIHPIVLKYLLNLEETTKALLECGISRAANVAQISTGSFLINRYATNRPTKQRELFQAT
Ga0184619_100009523	3300018061	Groundwater Sediment	MHVIQFREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0184617_10099452	3300018066	Groundwater Sediment	MHVIQFREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIRPGSLLINRYATNRPTKQRDLFQAT
Ga0184618_101471632	3300018071	Groundwater Sediment	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQVSTGSFLINRYATNRPTKQRDLFQAT
Ga0184635_100066083	3300018072	Groundwater Sediment	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTNRYATNRPTKQRDLFQAT
Ga0184609_101646231	3300018076	Groundwater Sediment	MHVIQFREIMRDAEVAHAIHPIIFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTNRYATNRPTKQRDLFQAT
Ga0184642_16623621	3300019279	Groundwater Sediment	MRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0173481_103042851	3300019356	Soil	MRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT
Ga0173481_108889281	3300019356	Soil	MHLIQFREIMRDAKVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTRSFLINKYATNRPTKQRDLFQAT
Ga0173482_105811271	3300019361	Soil	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSYLTNRYATNRPTKQRELFQAT
Ga0173479_100534912	3300019362	Soil	MHLIQFREIMRDAKVAYAIHPIVLKYLLTVGETTKALLECGVSRAANVAQISAGSSLIKYATNRPTKQRDLFQAT
Ga0193756_10177652	3300019866	Soil	AIHPIVLKYLLTVEETAKALLECGVSRAANVAQISTGSFLINRYATNRPTKQRELFQAT
Ga0193704_10447601	3300019867	Soil	MHVIQFREIMRDAEVAHAIHPIIFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPTKQRDLFQAT
Ga0193720_10141032	3300019868	Soil	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTHRYATNRPTKQRDLFQAT
Ga0193722_10088231	3300019877	Soil	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANEAQIRPGSLLINRYATNRPTKQRDLFQAT
Ga0193723_10016154	3300019879	Soil	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQPT
Ga0193707_10097984	3300019881	Soil	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETAKALLECGVSRAANVAQISTGSFLINKYATNRSTKQRDLFQAT
Ga0193707_10435412	3300019881	Soil	MHVIQFREIMRDAEMAHAIHPIVLKYLLTVEETTKALLARGVSRAANVAQISTVSFLINKYATNRPTKQRDLFQAT
Ga0193727_11072472	3300019886	Soil	MHVIQFREIMRDAEMAHAIHPIVLKYLLTVEETTKALLARGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Ga0193751_10202524	3300019888	Soil	MHLIQFREIMRDAEVACAIHPIVLKYLLTVEETAKALLACGVSRAANVAQISTGSFLVNKYATKQRDLFQAT
Ga0193728_11393732	3300019890	Soil	MLKWRMQFIRSWLKYLLTVETTTKALLECGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQPT
Ga0193693_10196503	3300019996	Soil	MLKWRMQFIRSWLKYLLTVEKTTKALLECGVSRAANVAQISTGSFLINKYATNRSTKQRDLFQAT
Ga0193711_10091681	3300019997	Soil	MRDAEVAHAIHPIIFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPTKQRELFQATQGL
Ga0193730_10047143	3300020002	Soil	MAHAIHPIVLKYLLTVEETTKALLARGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Ga0193730_10165174	3300020002	Soil	MRDAEVAHAIHPIVLKYLLTVEETAKALLECGVSRAANVAQISTGSFLINKYATNRSTKQRDL
Ga0193735_11300541	3300020006	Soil	MRDAEVAHAIHPIIFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTNRYATNCPTKQRDLFQAT
Ga0193757_10062163	3300020008	Soil	MRDAEVAHAIHPIVLKYLLDWRRRPNPLLECGVSRAANVAQISTGSFLVNRYA
Ga0193749_10875201	3300020010	Soil	MRDAEVACAIHPIVLKYLLTVEETAKALLACGVSRAANVAQISTGSFLVNKYATKQRDLFQAT
Ga0193732_10247692	3300020012	Soil	MLKPAAAVHPIVLKFLLTVEETTKALLECGLSRAANEAQIRPGSLLINRYATNRPTKQRDLFQAT
Ga0193721_10002729	3300020018	Soil	MRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTHRYATNRPTKQRDLFQAT
Ga0193733_10035002	3300020022	Soil	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Ga0193733_10410552	3300020022	Soil	MHVIQFREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLTNRYATNRPTKQRDSFQAT
Ga0210399_115147491	3300020581	Soil	MHLIQFHEIIRDAEVAYAIHPIVLKYLMTVEATTKALSACGVPRAANVAQISTASFLDNEYATNRPTKQRDLFQAT
Ga0210406_104783091	3300021168	Soil	MHVIQFREIMRDAEVANAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGNFLINKYATNRPTTQRDLFQAT
Ga0210408_101068632	3300021178	Soil	MHVIQFREIMRDAEVAHAIHPVVLKYLLTVEETTKALLECGVSRAANLAQISTGSFLINRYATKRPTKQRDLFQAT
Ga0193719_100324653	3300021344	Soil	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQIGTGSFLINKYATNRPTKQRDLFQAT
Ga0193695_10047212	3300021418	Soil	MHVIQFREIMRDAEVAHAIHPIVLKYILTVEETTKALLACGVSRAANVAQIGTGSFLINKYATNRPTKQRDLFQAT
Ga0222625_12052782	3300022195	Groundwater Sediment	MLKPAAAIHPIVLKFLLTVEETTKALLECGVSRAANIGQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0224452_10216031	3300022534	Groundwater Sediment	MHVIQFREIMRDAEVAHTIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTNRYATNRPTKQRDLFQAT
Ga0222622_100513163	3300022756	Groundwater Sediment	FREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0222622_103704502	3300022756	Groundwater Sediment	MHVIQFREIMRDAEVAHAIHPIVLKYPLTVEETTKALLECGVSRAANVAQISTGSFLINRYATNRPTKQRELFQAT
Ga0207666_10831241	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRE
Ga0207697_100025054	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MHVIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT
Ga0207684_101137254	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MHLVQFREIVRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTCSFLINKYATNRPAMQRDLFQAT
Ga0207693_108119871	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHLIQFRQIMRDAEVACAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLVNTYATKRPTKQRDLFQAI
Ga0207690_110180772	3300025932	Corn Rhizosphere	AEVAHAIRPIVFKYLLTAEETTKTLQECGVSRAANVAQISTDSFLINKYATNRPAKQRDLFQAT
Ga0207668_117151721	3300025972	Switchgrass Rhizosphere	AEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT
Ga0207702_113685621	3300026078	Corn Rhizosphere	MRVIQFREIMRDAEVAHAIRPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLINRYATNRPKQRELFQAT
Ga0209686_11213862	3300026315	Soil	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNRPTKQRDLFQAT
Ga0209577_100105867	3300026552	Soil	MHLIQFCEIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINRYATNRPTKQRDLFQAT
Ga0179593_11821951	3300026555	Vadose Zone Soil	MRDAEVAHAIHPIVLKYLLTVEETAKALLECGVSRAANVAQISTGSFLIPKYATNRSTKQRELFQAT
Ga0208071_1008441	3300026688	Soil	MHVIQFREIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGRFLINKYATNRPTKQRDLFQAT
Ga0208709_1013371	3300026693	Soil	MHVIQFREIMRDAEVAYAIHPIVLKYLLTVGETTKALLACGVSRAANVAQISTGRFLINKYATNRPTKQRDLFQAT
Ga0208072_1065771	3300026791	Soil	IQFREIMRDAEVAHAIHPIVFKYLLTVEETTKTLQECGVSRAANVAQISTGSFLTNRYATNCPTKQRDLFQAT
Ga0207503_10140242	3300026861	Soil	EVAHAIHPIVLKYLLTVGETTKALLECGVSRAANVAQISAGSSLIKYATNRPTKQRDLFQAT
Ga0209968_10813712	3300027526	Arabidopsis Thaliana Rhizosphere	MRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVARISTGSFLINKYATNRPTKQRDLFQAT
Ga0210002_10394162	3300027617	Arabidopsis Thaliana Rhizosphere	MHLIQFREIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVARISTGSFLINKYATNRPTKQRDLFQAT
Ga0209814_104868072	3300027873	Populus Rhizosphere	DAEVAHSIHPIVFKYLLTVEETTKTLQECGISRAANVAQISTGSFLINQYATNRPTKQRDLFQAT
Ga0209974_100751911	3300027876	Arabidopsis Thaliana Rhizosphere	MHGIQFREIMRDAEVAYAIHPIVLKYLLTVGETTKALLECGVSRAANVAQISAGSSLIKYATNRPTKQRDLFQAT
Ga0307295_101446191	3300028708	Soil	QFREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANIGQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0307313_100452962	3300028715	Soil	MRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANIGQIRPSSLLINRYATNRPTKQRDLFQAT
Ga0307311_101869451	3300028716	Soil	MHVIQFREIMRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Ga0307290_102555591	3300028791	Soil	MRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQIRPSSLLINRYATN
Ga0307299_100309811	3300028793	Soil	MHVIQFREIMRDAEMAHAIHPIVLKYLLTVEETTKALLARGVSRAANVAQIGTGSFLINKYATNRPTKQRDLFQPT
Ga0307287_103105361	3300028796	Soil	VIQFREIMRDAEVAHAIHPIVFKYLLTAEETTKTLQECGVSRAANVAQISTGSFLTNRYATNCPTKQRDLFQAT
Ga0307302_101550452	3300028814	Soil	MLKPAAAIHPIVLKFLLTVEETTKALLECGVSRAANVAQIRPGSLLINRYATNRPTKQRDLF
Ga0307278_100077461	3300028878	Soil	MHLVQFREIMRDAEAAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISAGSFLINKYATNRPAKQRDLFQAT
Ga0308185_10152462	3300031081	Soil	MRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQIGTGSFLINKYATNRPTKQRDLFQAI
Ga0308181_10599292	3300031099	Soil	MRDFEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANIGQIRPSSLLINRYATNRPTKQRDLFQPT
Ga0170824_1133774661	3300031231	Forest Soil	MHVIQFREIMRDGEVAHAIHPIVLKYLLTVEETAKALLECSVSRAANVAQISTGSFLINKYATNRSTKQRDLF
Ga0170824_1198872912	3300031231	Forest Soil	MHVIQFREIMRDAEVAHAIHPIVLKYLLTVEETTKALLECGVSRAANVAQISTRNFLINKYATNRPTKQRDLFQAT
Ga0170820_157057262	3300031446	Forest Soil	MHVIQFREIMRDGEVAHAIHPIVLKYLLTVEETAKALLECSVSRAANVAQISTGSFLINKYA
Ga0310813_108724941	3300031716	Soil	LVQFREIMRDAQVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSSLINKYATNRPTRQRDLFQAT
Ga0307469_107274081	3300031720	Hardwood Forest Soil	HVIQFREIMRDAEVAHAIHPVVLKYLLTVEETIKALLECGVSRAANLAQISTGSFLINRYATNRPTKQRDLFQAI
Ga0307469_119089462	3300031720	Hardwood Forest Soil	MHVIQFREIVRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSSLIDKYATNPPTKQRDLFQAT
Ga0307471_1019162012	3300032180	Hardwood Forest Soil	MYVIQFREMVRDAEVAHAIRPIVLKYLLTVEETTKALLACGVSRAANVAQISTGRFLINKYATNRPTKQRDLFQAT
Ga0310812_100759832	3300032421	Soil	DAEVAYAIHPIMLKYLLIVEETTKAWLACGVSRSANVARISTGSFLINKYATNRPTKQRDLFQAT
Ga0310810_100962641	3300033412	Soil	MHVIQFREIMRDAEVAYAIRPIVLKYLLTVEEMTKALLACGVSRAANVAQISTGRFLINKYATNRPAKQRDLFQAT
Ga0310810_101336822	3300033412	Soil	MHLVQFREMMRDAEVAHAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSSLINKYATNRPTRQRDLFQAT
Ga0310810_107942501	3300033412	Soil	EVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT
Ga0310810_111644902	3300033412	Soil	MHLVQFREIMRDAEVAHAIHPIVLKYLVAVEETTEALLACGVSRAANVAQISAGSFLINKYATNRPAMQRDLFQAT
Ga0310811_108174091	3300033475	Soil	MHLIQFREIMRDAEVAYAIHPIVLKYLLTVEETTKALLACGVSRAANVAQISTGSFLINKYATNRPTKQRDLFQAT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053504

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences