Metagenome Family F053394

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053394
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	85 residues
Representative Sequence	EPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Number of Associated Samples	115
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.71 %
% of genes near scaffold ends (potentially truncated)	97.16 %
% of genes from short scaffolds (< 2000 bps)	97.16 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.064 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.149 % of family members)
Environment Ontology (ENVO)	Unclassified (39.716 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.064 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.72% β-sheet: 0.00% Coil/Unstructured: 41.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF13416	SBP_bac_8	4.96
PF08402	TOBE_2	0.71
PF02591	zf-RING_7	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1579	Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
All Organisms	root	All Organisms	48.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
cellular organisms	root	All Organisms → cellular organisms	43.97 %
Viruses	superkingdom	All Organisms → Viruses	4.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	39.72 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.30 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.96 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	37.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.96 %
Gemmatimonadetes bacterium 13_1_40CM_70_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_70_11	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.06 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	37.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Gemmatimonadetes bacterium 13_1_40CM_70_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_70_11	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_102446139	Not Available	624	Open in IMG/M
3300000890\|JGI11643J12802_11597164	All Organisms → cellular organisms → Bacteria → Terrabacteria group	883	Open in IMG/M
3300000890\|JGI11643J12802_12252855	All Organisms → Viruses → Predicted Viral	1163	Open in IMG/M
3300000891\|JGI10214J12806_11869827	Not Available	578	Open in IMG/M
3300000956\|JGI10216J12902_114280846	Not Available	530	Open in IMG/M
3300002568\|C688J35102_118113540	Not Available	530	Open in IMG/M
3300003995\|Ga0055438_10039597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1176	Open in IMG/M
3300004153\|Ga0063455_100657019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300004156\|Ga0062589_100841510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300004156\|Ga0062589_101492361	Not Available	664	Open in IMG/M
3300004157\|Ga0062590_102547439	Not Available	543	Open in IMG/M
3300004479\|Ga0062595_100599098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300004643\|Ga0062591_100993019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	798	Open in IMG/M
3300005093\|Ga0062594_102331168	Not Available	583	Open in IMG/M
3300005093\|Ga0062594_102342978	Not Available	582	Open in IMG/M
3300005093\|Ga0062594_103074407	Not Available	522	Open in IMG/M
3300005184\|Ga0066671_10834577	Not Available	587	Open in IMG/M
3300005186\|Ga0066676_11173238	Not Available	503	Open in IMG/M
3300005328\|Ga0070676_11033762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300005329\|Ga0070683_101155334	Not Available	744	Open in IMG/M
3300005330\|Ga0070690_100283880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1182	Open in IMG/M
3300005335\|Ga0070666_10710978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300005337\|Ga0070682_101384810	Not Available	601	Open in IMG/M
3300005338\|Ga0068868_100538082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1028	Open in IMG/M
3300005340\|Ga0070689_101073928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300005340\|Ga0070689_101806543	Not Available	557	Open in IMG/M
3300005355\|Ga0070671_100975133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300005356\|Ga0070674_100127169	All Organisms → Viruses → Predicted Viral	1895	Open in IMG/M
3300005356\|Ga0070674_101998271	Not Available	528	Open in IMG/M
3300005366\|Ga0070659_101403656	Not Available	621	Open in IMG/M
3300005439\|Ga0070711_100597019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300005439\|Ga0070711_101714245	Not Available	551	Open in IMG/M
3300005439\|Ga0070711_101944140	Not Available	517	Open in IMG/M
3300005455\|Ga0070663_101054911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300005456\|Ga0070678_100362176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300005535\|Ga0070684_100491827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1136	Open in IMG/M
3300005535\|Ga0070684_101960716	Not Available	553	Open in IMG/M
3300005544\|Ga0070686_100363399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1091	Open in IMG/M
3300005560\|Ga0066670_10175176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1273	Open in IMG/M
3300005614\|Ga0068856_100073468	All Organisms → cellular organisms → Bacteria	3386	Open in IMG/M
3300005617\|Ga0068859_102574298	Not Available	560	Open in IMG/M
3300005718\|Ga0068866_11290957	Not Available	530	Open in IMG/M
3300005719\|Ga0068861_101582433	Not Available	645	Open in IMG/M
3300005764\|Ga0066903_100383855	All Organisms → cellular organisms → Bacteria	2298	Open in IMG/M
3300005764\|Ga0066903_102523630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300005764\|Ga0066903_103684768	Not Available	824	Open in IMG/M
3300005844\|Ga0068862_101087456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	794	Open in IMG/M
3300005887\|Ga0075292_1004593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1665	Open in IMG/M
3300005937\|Ga0081455_10976959	Not Available	524	Open in IMG/M
3300006046\|Ga0066652_100034137	All Organisms → cellular organisms → Bacteria	3681	Open in IMG/M
3300006178\|Ga0075367_10840587	Not Available	585	Open in IMG/M
3300006881\|Ga0068865_101187418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300006881\|Ga0068865_101724309	Not Available	565	Open in IMG/M
3300006904\|Ga0075424_102393184	Not Available	554	Open in IMG/M
3300006914\|Ga0075436_100992848	Not Available	630	Open in IMG/M
3300009098\|Ga0105245_10879280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300009101\|Ga0105247_11756197	Not Available	515	Open in IMG/M
3300009148\|Ga0105243_10923504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300009156\|Ga0111538_11104323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300009162\|Ga0075423_10412470	All Organisms → Viruses → Predicted Viral	1418	Open in IMG/M
3300009176\|Ga0105242_10747634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300009177\|Ga0105248_13251497	Not Available	517	Open in IMG/M
3300009553\|Ga0105249_12084372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	640	Open in IMG/M
3300009792\|Ga0126374_11724332	Not Available	521	Open in IMG/M
3300010358\|Ga0126370_11270672	Not Available	688	Open in IMG/M
3300010362\|Ga0126377_12920987	Not Available	551	Open in IMG/M
3300010375\|Ga0105239_10209760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2183	Open in IMG/M
3300010397\|Ga0134124_13156383	Not Available	505	Open in IMG/M
3300010399\|Ga0134127_10518545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1207	Open in IMG/M
3300010400\|Ga0134122_12172811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_70_11	598	Open in IMG/M
3300010401\|Ga0134121_11383626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300011119\|Ga0105246_10870796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300011119\|Ga0105246_11968590	Not Available	563	Open in IMG/M
3300012200\|Ga0137382_11031251	Not Available	590	Open in IMG/M
3300012212\|Ga0150985_104543190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300012212\|Ga0150985_106125986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300012212\|Ga0150985_108603108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300012486\|Ga0157331_1015944	Not Available	618	Open in IMG/M
3300012883\|Ga0157281_1120020	Not Available	500	Open in IMG/M
3300012893\|Ga0157284_10338477	Not Available	505	Open in IMG/M
3300012906\|Ga0157295_10226802	Not Available	612	Open in IMG/M
3300012907\|Ga0157283_10227382	Not Available	605	Open in IMG/M
3300012907\|Ga0157283_10286389	Not Available	565	Open in IMG/M
3300012910\|Ga0157308_10389161	Not Available	538	Open in IMG/M
3300012910\|Ga0157308_10420346	Not Available	524	Open in IMG/M
3300012911\|Ga0157301_10255293	Not Available	619	Open in IMG/M
3300012911\|Ga0157301_10351450	Not Available	556	Open in IMG/M
3300012915\|Ga0157302_10218808	Not Available	694	Open in IMG/M
3300012915\|Ga0157302_10262313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012951\|Ga0164300_10478826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300012958\|Ga0164299_10332172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300012961\|Ga0164302_10671968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300012961\|Ga0164302_11076346	Not Available	633	Open in IMG/M
3300012971\|Ga0126369_10905035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300012971\|Ga0126369_11708235	Not Available	719	Open in IMG/M
3300012984\|Ga0164309_10230936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1293	Open in IMG/M
3300013105\|Ga0157369_10272983	All Organisms → Viruses → Predicted Viral	1762	Open in IMG/M
3300013297\|Ga0157378_11283853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300013297\|Ga0157378_11594230	Not Available	699	Open in IMG/M
3300013306\|Ga0163162_11706806	Not Available	719	Open in IMG/M
3300013306\|Ga0163162_11959645	Not Available	671	Open in IMG/M
3300013308\|Ga0157375_11741688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300013308\|Ga0157375_13299910	Not Available	538	Open in IMG/M
3300014745\|Ga0157377_10186106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1309	Open in IMG/M
3300015077\|Ga0173483_10180654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300015201\|Ga0173478_10846053	Not Available	507	Open in IMG/M
3300015372\|Ga0132256_100388884	All Organisms → Viruses → Predicted Viral	1495	Open in IMG/M
3300018029\|Ga0187787_10401178	Not Available	541	Open in IMG/M
3300018032\|Ga0187788_10242965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300018482\|Ga0066669_11269095	Not Available	666	Open in IMG/M
3300019361\|Ga0173482_10050176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1352	Open in IMG/M
3300019361\|Ga0173482_10576181	Not Available	561	Open in IMG/M
3300024055\|Ga0247794_10320954	Not Available	525	Open in IMG/M
3300025549\|Ga0210094_1005350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1874	Open in IMG/M
3300025903\|Ga0207680_11253773	Not Available	528	Open in IMG/M
3300025928\|Ga0207700_11798986	Not Available	539	Open in IMG/M
3300025933\|Ga0207706_10659225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	896	Open in IMG/M
3300025934\|Ga0207686_11033883	Not Available	668	Open in IMG/M
3300025938\|Ga0207704_10840253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300025938\|Ga0207704_11897906	Not Available	512	Open in IMG/M
3300025940\|Ga0207691_10745089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	825	Open in IMG/M
3300025942\|Ga0207689_10438151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1091	Open in IMG/M
3300025944\|Ga0207661_11553102	Not Available	606	Open in IMG/M
3300025961\|Ga0207712_11277262	Not Available	656	Open in IMG/M
3300025981\|Ga0207640_11043654	Not Available	721	Open in IMG/M
3300025986\|Ga0207658_11056980	Not Available	741	Open in IMG/M
3300026020\|Ga0208531_1019977	Not Available	603	Open in IMG/M
3300026023\|Ga0207677_10465683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300026075\|Ga0207708_11184823	Not Available	668	Open in IMG/M
3300026078\|Ga0207702_10318770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1480	Open in IMG/M
3300026121\|Ga0207683_11056974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300028145\|Ga0247663_1071612	Not Available	607	Open in IMG/M
3300028705\|Ga0307276_10027209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1164	Open in IMG/M
3300028719\|Ga0307301_10092995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300028744\|Ga0307318_10233576	Not Available	639	Open in IMG/M
3300028880\|Ga0307300_10036594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1355	Open in IMG/M
3300028889\|Ga0247827_10888730	Not Available	597	Open in IMG/M
3300030336\|Ga0247826_10263511	All Organisms → Viruses → Predicted Viral	1217	Open in IMG/M
3300031366\|Ga0307506_10359885	Not Available	586	Open in IMG/M
3300031716\|Ga0310813_10972987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300033004\|Ga0335084_10508106	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.28%
Host-Associated	Host-Associated	39.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.87%
Plants	Host-Associated → Plants	39.72%
Aquatic	Environmental → Aquatic	1.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.60%
Marine	Environmental → Aquatic → Marine	1.42%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.89%
Loam	Environmental → Terrestrial → Soil → Loam	14.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.51%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.13%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.42%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.42%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.71%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.84%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.13%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.13%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.42%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012486	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.120510	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026020	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403 (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1024461392	3300000559	Soil	ELRAQLAQWNELNQRSIAKLGEALRAADKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
JGI11643J12802_115971643	3300000890	Soil	ELRKQVSQWNELNQRSIAKLGEALRAADKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
JGI11643J12802_122528551	3300000890	Soil	LITRSVRKVEPILRVEAEAMRRLKPPRELREQVAQWNELNRRSIAKLGVALRAADKTDLRGIQVAYVEFVVTGAK
JGI10214J12806_118698272	3300000891	Soil	PPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
JGI10216J12902_1142808461	3300000956	Soil	RLYGPKLDKIPPPIDVTIPSEITESVRKVEPVLRAEADAMRRLTPPRELKSQLARWNELNQSSIAKLGEALRAAKKVDLRGIQVAYVSFVVTGAKAQHLGHQIGFPSPPC*
C688J35102_1181135401	3300002568	Soil	AQVARWSELNDRSIAKLAVALRAAEKVDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0055438_100395971	3300003995	Natural And Restored Wetlands	QWNELNQRSIAKLAEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0063455_1006570191	3300004153	Soil	LEPPRELRARIARWDELNQRSIAKLGEALRAAKKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0062589_1008415101	3300004156	Soil	ICRFYGPKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0062589_1014923612	3300004156	Soil	RRLEPPRELRAQLARWNKLNQQSIAKLGEALRAAQKTDLRGIQVAYVEFVVTGARAQKLGHAIGFPSPPC*
Ga0062590_1025474391	3300004157	Soil	AVRRLKPPRELRAQLKEWNELNERSIAKLGEALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0062595_1005990981	3300004479	Soil	PKLDKIPPPIDVTIPSEITESVSKVEPLLRAEAKAMRKLKSPPELKAQLERWNELNQQSIAKLGEALRAAKAEKIDLRGIQVNYVAFVVIGAKAQKLGHAIGFPSPPC*
Ga0062591_1009930192	3300004643	Soil	ILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0062594_1023311682	3300005093	Soil	APPRELRAQVARWNELNRQSIGKLREALRAAGETNLTGIQVAYVSFVVTGAKAQKLGKAIGFPSPPC*
Ga0062594_1023429781	3300005093	Soil	YDITIPALITRSVTKVQPILQAEAAAMRRLEPPPELRAQVARWNELNRSSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC*
Ga0062594_1030744071	3300005093	Soil	GPKLDKIPPPYDVTIPALITRSVKKVEPLLRAEAAAMRRLKPPRELKAKLKRWNELNQQSIAKLGEALRAARNVDLRGIQVAYVTFVVTGAKAQKLGHAIGFPSPPC*
Ga0066671_108345771	3300005184	Soil	AVRRLTPPRELRALLARWSKLNDESIAKLGEALRAAKKIDLRGIQVSYVSFVVTGAKAQRLGHAIGFPSPPC*
Ga0066676_111732381	3300005186	Soil	PSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLARWNELNQRSIAKLGEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070676_110337622	3300005328	Miscanthus Rhizosphere	SIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070683_1011553341	3300005329	Corn Rhizosphere	FAKVAAICRLYGPRLDKIPPPYDITIPALITRSVTKVQPILQAEAAAMRRLEPPPELRAQVARWNELNRSSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC*
Ga0070690_1002838801	3300005330	Switchgrass Rhizosphere	VEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0070666_107109782	3300005335	Switchgrass Rhizosphere	RKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070682_1013848102	3300005337	Corn Rhizosphere	KVEPLLRAEAAAMRRLKPPRELKAKLKRWNELNQQSIAKLGEALRAAKNVDLRGIQVAYVTFVVTGAKAQKLGHQIGFPSPPC*
Ga0068868_1005380821	3300005338	Miscanthus Rhizosphere	QWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070689_1010739281	3300005340	Switchgrass Rhizosphere	LRAEAEAMRRLKPPRELRAQLARWNDLNRRSIAKLGEALRAAEKIDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0070689_1018065431	3300005340	Switchgrass Rhizosphere	ALITRSVTKVQPILQAEAAAMRRLEPPPELRAQVARWNELNRSSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC*
Ga0070671_1009751331	3300005355	Switchgrass Rhizosphere	PPPIDVTIPSEITESVRKVEPVLRAEAEAVRRLEPPRELRARLARWNELNRRSIAKLGEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHSIGFPSPPC*
Ga0070674_1001271691	3300005356	Miscanthus Rhizosphere	KLDKIPPPYDVTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0070674_1019982712	3300005356	Miscanthus Rhizosphere	YDITIPALITRSVTKVQPILQAEAAAMRRLEPPPELRSQVARWNELNRNSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC*
Ga0070659_1014036561	3300005366	Corn Rhizosphere	EQLARWNELNRQSIAKLRVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0070711_1005970191	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LRAEAEAVRRLEPPRELRALLSQWNELNQRSIAKLGEALRAAQKTDLRGIQVAYVEFVVTGAKAQKLGHSIGFPSPPC*
Ga0070711_1017142451	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	YGPKLDKIPPPIDVTIPSEITESVKKVEPVLRAEAEAMRRLKPPRELKAKLARWNELNQQSIAKLGEALRAAEKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0070711_1019441401	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EAVRRLTPPRELRALLARWNELNQRSIAKLRVALRAAKKIDLRGIQVAYVSFVVTGAKAQKLGHKIGFPSPPC*
Ga0070663_1010549112	3300005455	Corn Rhizosphere	LEPPRELRAKLAQWNELNRRSIAKLGDALRAAEKIDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070678_1003621762	3300005456	Miscanthus Rhizosphere	PKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070684_1004918272	3300005535	Corn Rhizosphere	EAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0070684_1019607161	3300005535	Corn Rhizosphere	YGPKLDKIPPPIDVTIPSEITESVKKVEPVLRAEAQAMRRLKPPRELKAKLARWNELNQQSIAKLGEALRAAEKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0070686_1003633991	3300005544	Switchgrass Rhizosphere	TIPSEITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0066670_101751762	3300005560	Soil	PKLDKIPPPIDVTIPSEITESVTKVEPILRAEANAVRRLTPPRELRAQLARWSKLNDSSIAKLGEALRAAKKTDLRGIQVAYVSFVVTGAKAQKLGHAIGFPSPPC*
Ga0068856_1000734684	3300005614	Corn Rhizosphere	KLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0068859_1025742982	3300005617	Switchgrass Rhizosphere	AMRRLKSPPELKARIRRWNELNQQSIAKLGEALRAAEKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0068866_112909572	3300005718	Miscanthus Rhizosphere	AEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0068861_1015824332	3300005719	Switchgrass Rhizosphere	PKLDKIPPPYDVTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0066903_1003838553	3300005764	Tropical Forest Soil	AAICRLYGPKLDKIKPPIDVTIPSEITESVKKVEPILRAEAEAVRRLEPPRELRAQLARWNDLNQRSIAKLGEALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHTIGFPSPPC*
Ga0066903_1025236301	3300005764	Tropical Forest Soil	LNRRSIAKLGVALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0066903_1036847682	3300005764	Tropical Forest Soil	ALITRSVRRVEPILRAEAEAMRRLAPPRELRAQLEQWNELNQRSIAKLGVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0068862_1010874561	3300005844	Switchgrass Rhizosphere	ARVAAICRLYGPKLDKIPPPYDITIPALITRSVRKVEPILRAEAEAMRRLAPPPELRAQLARWNELNRRSIAKLGVALRAADKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0075292_10045931	3300005887	Rice Paddy Soil	SEIIESVRKVEPVLRAEAGAVRRLEPPRELRARLARWNTLNERSIGKLREALRAAEKTDLRGIQVAYVAFVVTGAKAQKLGRAIGFPSPPC*
Ga0081455_109769591	3300005937	Tabebuia Heterophylla Rhizosphere	NELNRRSIAKLAEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0066652_1000341371	3300006046	Soil	YGPKLDKIPPPIDVTIPSEITESVQKVEPVLRAEAEAVRRLEPPRELRARIVRWNELNQRSIAKLREALRAAKKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0075367_108405871	3300006178	Populus Endosphere	TGRSAHGAPAAICRLYGPKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0068865_1011874181	3300006881	Miscanthus Rhizosphere	ARWNELNRSSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC*
Ga0068865_1017243092	3300006881	Miscanthus Rhizosphere	AQLARWNELNQRSIARLRVALRAAKKIDLRGIQVAYVEFVVIGAKAQKLGKAIGFPSPPC
Ga0075424_1023931841	3300006904	Populus Rhizosphere	FARVAAICRFYGPKLDKIPPPYDVTIPALITRSVKKVEPLLRAEAAAMRRLKPPRELKAKLKRWNELNQQSIAKLGEALRAARNVDLRGIQVAYVTFVVTGAKAQKLGHQIGFPSPPC*
Ga0075436_1009928482	3300006914	Populus Rhizosphere	RRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0105245_108792801	3300009098	Miscanthus Rhizosphere	AEAAAMRRLEPPPELRTQVARWNELNRNSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC*
Ga0105247_117561971	3300009101	Switchgrass Rhizosphere	KLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKIGHSIGFPSPPC*
Ga0105243_109235042	3300009148	Miscanthus Rhizosphere	ELRAQLARWNELNQRSIARLRVALRAAKKIDLRGIQVAYVEFVVIGAKAQKLGKAIGFPSPPC*
Ga0111538_111043232	3300009156	Populus Rhizosphere	EAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAEKIDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0075423_104124701	3300009162	Populus Rhizosphere	LARWNELNKRSMAKLKEALRAAEKTDLRGIQVAYVSFVVTGAKAQKLGHAIGFPSPPC*
Ga0105242_107476341	3300009176	Miscanthus Rhizosphere	IPALITRSVKKVEPLLRAEAAAMRRLKPPRELQAKLKRWNELNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0105248_132514971	3300009177	Switchgrass Rhizosphere	ICRLYGPKLDKIPRPIDVTISSESTESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0105249_120843722	3300009553	Switchgrass Rhizosphere	ARWNELNERSIAKLGEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0126374_117243322	3300009792	Tropical Forest Soil	AEAVRRLEPPRELRAQLKEWNELNQRSIAKLGEALRPAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0126370_112706721	3300010358	Tropical Forest Soil	PILRAEAEAVGRLEPPRELRAQVEQWNDLNRRSIAKLGVALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0126377_129209871	3300010362	Tropical Forest Soil	ICRLYGPKLDKIPPPIDVSIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIDKLGVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0105239_102097603	3300010375	Corn Rhizosphere	FYGPKLDKIPPPYDVTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0134124_131563831	3300010397	Terrestrial Soil	IPPPIDVTTPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0134127_105185452	3300010399	Terrestrial Soil	EITESVRKVEPILRAEAEAVRRLEPPRELRATLAQWNELNRRSIAKLGVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0134122_121728112	3300010400	Terrestrial Soil	VKKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALRAAKNVDLRGIQVAYVTFVVTGAKAQKLGHQIGFPSPPC*
Ga0134121_113836261	3300010401	Terrestrial Soil	VRKVEPILRAEAEAVRRLEPPRELRATLAQWNELNRRSIAKLGVALRAAEKTDLRGIQVAYVEFVVIGAKAQKLGHAIGFPSPPC*
Ga0105246_108707961	3300011119	Miscanthus Rhizosphere	IPSEITESVKKVEPVLRAEAEAMRRLKPPRELKAKLARWNELNQQSIAKLGEALRAAEKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0105246_119685901	3300011119	Miscanthus Rhizosphere	LDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0137382_110312511	3300012200	Vadose Zone Soil	TIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAKLAQWNELNQRSIAKLGEALRAAERTDLRGIQVAYVSFVVTGAKAQKLGHAIGFPSPPC*
Ga0150985_1045431901	3300012212	Avena Fatua Rhizosphere	PPIDVTIPSEITESVQKVEPVLRAEAEAVRRLEPPRELRARIARWDELNQRSIAKLGEALRAAKKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0150985_1061259862	3300012212	Avena Fatua Rhizosphere	LRAEADAVRRLKPPRELRKQIARWNELNHRSIAKLAEALRAAEMTDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC*
Ga0150985_1086031082	3300012212	Avena Fatua Rhizosphere	GSELNEASIAKLRVVLRAAKNVDLRGIQVAYVEFVVTGAKAQKIGHSIGFPSPPC*
Ga0157331_10159441	3300012486	Soil	QLAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157281_11200201	3300012883	Soil	MRRLEPPPELRAQLTRWNELNRRSIAKLRVALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC*
Ga0157284_103384771	3300012893	Soil	VTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0157295_102268021	3300012906	Soil	KVEPILRAEAEAMRRLEPPPELRAQLTRWNELNRRSIAKLRVALRAAKKTDLRGIQVAYVEFVVTGAKAQKIGHAIGFPSPPC*
Ga0157283_102273821	3300012907	Soil	PILRAEAEAMRRLEPPPELRAQLTRWNELNRRSIAKLRVALRAAKKTDLRGIQVAYVEFVVTGAKAQKIGHTIGFPSPPC*
Ga0157283_102863891	3300012907	Soil	IDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157308_103891611	3300012910	Soil	FYGPKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157308_104203462	3300012910	Soil	LKPPRELKAKLKRWNELNQQSIAKLGEALRAARNVDLRGIQVAYVTFVVTGAKAQKLGHQIGFPSPPC*
Ga0157301_102552931	3300012911	Soil	KAEAVRRLKPPRELRAQLKEWNELNERSIAKLGEALRAADKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157301_103514501	3300012911	Soil	KVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0157302_102188081	3300012915	Soil	EPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157302_102623131	3300012915	Soil	KLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0164300_104788261	3300012951	Soil	RWNELNKRSIAKLGEALRAAQKTDLRGIQVAYVEFVVTGAKAQKLGHSIGFPSPPC*
Ga0164299_103321722	3300012958	Soil	AICRLYGPKLDKIPPPYDITIPALITRSVRKVEPILRAEAEAMRRLEPPRELRAKLAQWNELNRRSIAKLGDALRAAEKIDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0164302_106719682	3300012961	Soil	AEAAAMRRLKPPRELQAKLKRWNELNQQSIAKLGEALRAAKNVDLRGIQVAYVTFVVTGAKAQKLGHAIGFPSPPC*
Ga0164302_110763462	3300012961	Soil	VRKVEPVLRAEAKAVRRLEPPRELRAQLARWNELNRRSIAKLGDALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0126369_109050352	3300012971	Tropical Forest Soil	EAEAMRRLAPPRELRAQLEQWNELNQRSIAKLGVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0126369_117082352	3300012971	Tropical Forest Soil	EPVLRAEAEAVRRLRSPRELRAQLQRWNELNQQSIAKLGVALRAAKKIDLRGIQVAYVSFVVTGAKAQKLGHKIGFPSPPC*
Ga0164309_102309362	3300012984	Soil	LITRSVRKVEPILRAEAEAMRRLEPPRELRAQLARWNELNGRSIAKLRVALRAAEKIDLRGIQVAYVEFVVTGAKAQKIGHALGFPSPPC*
Ga0157369_102729831	3300013105	Corn Rhizosphere	LRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157378_112838532	3300013297	Miscanthus Rhizosphere	WNELNRRSIARLRVALRAAKKIDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC*
Ga0157378_115942301	3300013297	Miscanthus Rhizosphere	IPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0163162_117068062	3300013306	Switchgrass Rhizosphere	EAEAMRRLKPPRELRDQLEQWNELNRRSIAKLGVALRAADKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0163162_119596451	3300013306	Switchgrass Rhizosphere	ARVAAICRFYGPKLDKIPPPYDVTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALRAAAKTDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0157375_117416882	3300013308	Miscanthus Rhizosphere	SEITESVKKVEPVLRAEAEAMRRLKPPRELKAKLARWNELNQQSIAKLGEALRAAEKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC*
Ga0157375_132999101	3300013308	Miscanthus Rhizosphere	PPIDVTIPSEITESVKKVEPVLRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC*
Ga0157377_101861061	3300014745	Miscanthus Rhizosphere	PKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKPGHAIGFPSPPC*
Ga0173483_101806541	3300015077	Soil	TLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC*
Ga0173478_108460532	3300015201	Soil	EAMRGLEPPAELRAQVARWNELNGRSIARLKVALRAAAKTDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC*
Ga0132256_1003888842	3300015372	Arabidopsis Rhizosphere	PIDVTIPSEITESVTKVEPVLRAEAEAVRRLTPPRELRALLARWNELNQRSIAKLRVALRAAKKIDLRGIQVAYVSFVVTGAKAQKLGHKIGFPSPPC*
Ga0187787_104011781	3300018029	Tropical Peatland	YGPKLDKIPPPYDITIPALITRSVRKVEPILRAEAEAVRRIEPPRELRAQLAQWNKLNQRSIAKLAEALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0187788_102429652	3300018032	Tropical Peatland	LRAQLAQWNKLNQRSIAKLAEALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0066669_112690951	3300018482	Grasslands Soil	IPPPIDVTIPSEITESVKKVEPVLRAEAAAVRRLKPPRELRAQLARWSELNDRSIAKLGEALRASEKIDLRGIQVAYVSFVVTGAKAQRLGHTIGFPSPPC
Ga0173482_100501761	3300019361	Soil	ITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0173482_105761811	3300019361	Soil	RLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC
Ga0247794_103209541	3300024055	Soil	TESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNELNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0210094_10053502	3300025549	Natural And Restored Wetlands	QWNELNQRSIAKLAEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207680_112537731	3300025903	Switchgrass Rhizosphere	VAAICRLYGPKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207700_117989861	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LTPPRELRAKLARWSKLNDESIAQLGKALEAAKKIDLRGIQVAYVSFVVTGAKAQRLGHAIGFPSPPC
Ga0207706_106592252	3300025933	Corn Rhizosphere	TIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC
Ga0207686_110338831	3300025934	Miscanthus Rhizosphere	LDKVPPPYDVTIPALITRSVRKVEPILRAEAEAMRKLEPPRELRAQLARWNELNQRSIARLRVALRAAKKIDLRGIQVAYVEFVVIGAKAQKLGKAIGFPSPPC
Ga0207704_108402531	3300025938	Miscanthus Rhizosphere	PKLDKIPPPYDVTIPALITRSVRKVEPILRAEAEAMRRLKAPRELREQVAQWNELNRRSIAKLGVALRAADKTDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC
Ga0207704_118979062	3300025938	Miscanthus Rhizosphere	KPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC
Ga0207691_107450891	3300025940	Miscanthus Rhizosphere	AQVARWNELNRSSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC
Ga0207689_104381512	3300025942	Miscanthus Rhizosphere	VRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207661_115531022	3300025944	Corn Rhizosphere	KVQPILQAEAAAMRRLEPPPELRAQVARWNELNRSSIAKLAVALRAARATNLTGIQVAYVQFIVTGAKAQKLGKAIGFPSPPC
Ga0207712_112772622	3300025961	Switchgrass Rhizosphere	IPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAKLAQWNELNQRSIAKLGEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207640_110436541	3300025981	Corn Rhizosphere	RFYGPKLDKIPPPYDVTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC
Ga0207658_110569802	3300025986	Switchgrass Rhizosphere	ICRFYGPKLDKIPPPYDVTIPALITRSVTKVEPLLRAEAQAMRRLKPPRELKDKLARWNTLNQQSIAKLGEALSAAKNVDLRGIQVAYVEFVVTGAKAQKLGHQIGFPSPPC
Ga0208531_10199771	3300026020	Rice Paddy Soil	SEIIESVRKVEPVLRAEAGAVRRLEPPRELRARLARWNTLNERSIGKLREALRAAEKTDLRGIQVAYVAFVVTGAKAQKLGRAIGFPSPPC
Ga0207677_104656831	3300026023	Miscanthus Rhizosphere	RLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207708_111848231	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207702_103187702	3300026078	Corn Rhizosphere	PKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELREQIAQWNELNRRSIAKLAVALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0207683_110569742	3300026121	Miscanthus Rhizosphere	MRRLKPPRELKAKLARWNELNQQSIAKLGEALRAAEKVDLRGIQVAYVSFVVTGAKAQKLGHEIGFPSPPC
Ga0247663_10716121	3300028145	Soil	RRLEPPPELRAQLAQWNELNRRSIAKLRVALRAAAKTDLRGIQVAYVEFVVTGAKAQKIGHSIGFPSPPC
Ga0307276_100272092	3300028705	Soil	KIPPPIDVTIPSEITESVSKVEPILRAEAKAMRKLKAPRELRAKLERWNELNQQSIAKLGDALRASKARIMDLRGIQVAYVSFVVIGAKAQKLGHAIGFPSPPC
Ga0307301_100929952	3300028719	Soil	AEAVRRLDPPRELRAQLARWNELNRRSIAKLGEALRAAKRTDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC
Ga0307318_102335762	3300028744	Soil	MRKLKAPRELRAKLERWNELNQQSIAKLGDALRASKARIMDLRGIQVAYVSFVVIGAKAQKLGHAIGFPSPPC
Ga0307300_100365942	3300028880	Soil	RSVRKVEPILRAEAEAVRRLDPPRELRAQLARWNELNRRSIAKLGEALRAAKRTDLRGIQVAYVEFVVTGAKAQKLGKAIGFPSPPC
Ga0247827_108887302	3300028889	Soil	PKLDKIPPPIDVTIPSEITESVRKVEPILRAEAEAVRRLEPPRELRAQLAQWNDLNRRSIAKLGDALRAAKKTDLRGIQVAYVEFVVTGAKAQKLGHAIGFPSPPC
Ga0247826_102635111	3300030336	Soil	RAEAKAVRRLEAPRELRAQLARWNELNRRSIAKLGEALRAAEKTDLRGIQVAYVEFVVTGAKAQKLGHSIGFPSPPC
Ga0307506_103598852	3300031366	Soil	IPALITRSVKKVEPILRAEAEAMRRLEPPRELRAQVARWNGLNRRSIAKLRVALRAAEKIDLRGIQVAYVQFVVTGAKAQKLGHTIGFPSPPC
Ga0310813_109729872	3300031716	Soil	QWNELNRRSIAKLRVALRAAEKTDLRGIQVAYVEFVVTGAKAQKIGHAIGFPSPPC
Ga0335084_105081062	3300033004	Soil	RAEAEAVRRLEPPRELRSQLAQWNELNQRSIAKLGEALRAAAKTDLRGIQVAYVEFIVTGAKAQKLGHTIGFPSPPC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053394

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences