Metagenome / Metatranscriptome Family F053376

Basic Information
Family ID	F053376
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	78 residues
Representative Sequence	MLTLRALGTSGSGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Number of Associated Samples	117
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.28 %
% of genes near scaffold ends (potentially truncated)	30.50 %
% of genes from short scaffolds (< 2000 bps)	83.69 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (52.482 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.730 % of family members)
Environment Ontology (ENVO)	Unclassified (36.879 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.447 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.38% β-sheet: 24.53% Coil/Unstructured: 65.09%
Feature Viewer

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Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF13620	CarboxypepD_reg	2.84
PF00589	Phage_integrase	2.84
PF00270	DEAD	2.13
PF03352	Adenine_glyco	2.13
PF02518	HATPase_c	2.13
PF02146	SIR2	2.13
PF03747	ADP_ribosyl_GH	2.13
PF00072	Response_reg	1.42
PF07786	HGSNAT_cat	1.42
PF14681	UPRTase	1.42
PF07676	PD40	1.42
PF01872	RibD_C	1.42
PF00425	Chorismate_bind	0.71
PF01557	FAA_hydrolase	0.71
PF13426	PAS_9	0.71
PF00034	Cytochrom_C	0.71
PF00375	SDF	0.71
PF03781	FGE-sulfatase	0.71
PF00156	Pribosyltran	0.71
PF02880	PGM_PMM_III	0.71
PF03476	MOSC_N	0.71
PF00485	PRK	0.71
PF11453	DUF2950	0.71
PF01594	AI-2E_transport	0.71
PF00965	TIMP	0.71
PF00593	TonB_dep_Rec	0.71
PF01726	LexA_DNA_bind	0.71
PF12681	Glyoxalase_2	0.71
PF00465	Fe-ADH	0.71
PF02868	Peptidase_M4_C	0.71
PF08241	Methyltransf_11	0.71
PF07690	MFS_1	0.71
PF07394	DUF1501	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	2.13
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	2.13
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	2.13
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.42
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.42
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	1.42
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.71
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.71
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.71
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.71
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.71
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.71
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.71
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.71
COG3227	Zn-dependent metalloprotease (Neutral protease B)	Posttranslational modification, protein turnover, chaperones [O]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.48 %
Unclassified	root	N/A	47.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	24.11 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.22 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	4.26 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.38 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	4.26 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	1.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.42 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.38 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	4.26 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	1.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.42 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.38 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4.26 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	1.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.42 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.38 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	2.84 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	1.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.42 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.71 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.38 %
Luteitalea sp. TBR-22	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	2.84 %
Acidobacteria bacterium 13_1_40CM_4_65_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	1.42 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1.42 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.71 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02HAWLK	Not Available	625	Open in IMG/M
2228664021\|ICCgaii200_c0937372	Not Available	585	Open in IMG/M
2228664021\|ICCgaii200_c0937708	Not Available	646	Open in IMG/M
2228664021\|ICCgaii200_c0938219	Not Available	545	Open in IMG/M
3300000787\|JGI11643J11755_11577051	Not Available	865	Open in IMG/M
3300000789\|JGI1027J11758_12173864	Not Available	576	Open in IMG/M
3300000789\|JGI1027J11758_12430761	Not Available	575	Open in IMG/M
3300000890\|JGI11643J12802_10809789	Not Available	551	Open in IMG/M
3300000955\|JGI1027J12803_101393584	All Organisms → cellular organisms → Bacteria	2077	Open in IMG/M
3300000956\|JGI10216J12902_112332055	All Organisms → cellular organisms → Bacteria → Acidobacteria	2113	Open in IMG/M
3300002128\|JGI24036J26619_10029277	Not Available	1041	Open in IMG/M
3300002899\|JGIcombinedJ43975_10037512	Not Available	799	Open in IMG/M
3300004114\|Ga0062593_102681982	Not Available	567	Open in IMG/M
3300004156\|Ga0062589_101691420	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300004156\|Ga0062589_102014952	Not Available	586	Open in IMG/M
3300004463\|Ga0063356_100324816	Not Available	1926	Open in IMG/M
3300004463\|Ga0063356_100396638	Not Available	1772	Open in IMG/M
3300004463\|Ga0063356_100446697	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300004463\|Ga0063356_103297132	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300004463\|Ga0063356_104610420	Not Available	593	Open in IMG/M
3300004480\|Ga0062592_100854716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300004643\|Ga0062591_101766434	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300004801\|Ga0058860_10547203	Not Available	642	Open in IMG/M
3300005288\|Ga0065714_10190327	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300005293\|Ga0065715_10338268	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005328\|Ga0070676_10056409	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300005331\|Ga0070670_100020254	All Organisms → cellular organisms → Bacteria	5716	Open in IMG/M
3300005343\|Ga0070687_100394504	Not Available	906	Open in IMG/M
3300005354\|Ga0070675_100049408	All Organisms → cellular organisms → Bacteria → Acidobacteria	3452	Open in IMG/M
3300005364\|Ga0070673_100246627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1555	Open in IMG/M
3300005367\|Ga0070667_100585254	Not Available	1028	Open in IMG/M
3300005459\|Ga0068867_101180769	Not Available	702	Open in IMG/M
3300005526\|Ga0073909_10060839	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005543\|Ga0070672_100063348	All Organisms → cellular organisms → Bacteria → Proteobacteria	2920	Open in IMG/M
3300005564\|Ga0070664_101478955	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300005578\|Ga0068854_101982836	Not Available	536	Open in IMG/M
3300005616\|Ga0068852_100808950	Not Available	952	Open in IMG/M
3300005616\|Ga0068852_101671146	Not Available	659	Open in IMG/M
3300005719\|Ga0068861_101078249	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300005844\|Ga0068862_100951322	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300006049\|Ga0075417_10181809	All Organisms → cellular organisms → Bacteria → Acidobacteria	989	Open in IMG/M
3300006058\|Ga0075432_10548015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	522	Open in IMG/M
3300006196\|Ga0075422_10032036	Not Available	1837	Open in IMG/M
3300006844\|Ga0075428_100028667	All Organisms → cellular organisms → Bacteria	6159	Open in IMG/M
3300006844\|Ga0075428_100898616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300006845\|Ga0075421_100012764	All Organisms → cellular organisms → Bacteria → Acidobacteria	10451	Open in IMG/M
3300006845\|Ga0075421_100381951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1695	Open in IMG/M
3300006845\|Ga0075421_101225169	Not Available	835	Open in IMG/M
3300006847\|Ga0075431_100175196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2203	Open in IMG/M
3300006847\|Ga0075431_101747947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300006853\|Ga0075420_100016292	All Organisms → cellular organisms → Bacteria	6645	Open in IMG/M
3300006854\|Ga0075425_100423651	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300006880\|Ga0075429_100142355	Not Available	2099	Open in IMG/M
3300006894\|Ga0079215_10110520	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300006904\|Ga0075424_100263451	Not Available	1833	Open in IMG/M
3300006969\|Ga0075419_10120554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1698	Open in IMG/M
3300007004\|Ga0079218_10159533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1660	Open in IMG/M
3300007004\|Ga0079218_10213686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1485	Open in IMG/M
3300007004\|Ga0079218_10960921	Not Available	849	Open in IMG/M
3300007004\|Ga0079218_11671880	Not Available	703	Open in IMG/M
3300007004\|Ga0079218_12420004	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300007076\|Ga0075435_101200895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	664	Open in IMG/M
3300009094\|Ga0111539_10127444	All Organisms → cellular organisms → Bacteria	2981	Open in IMG/M
3300009147\|Ga0114129_10514992	Not Available	1560	Open in IMG/M
3300009147\|Ga0114129_11745189	Not Available	758	Open in IMG/M
3300009148\|Ga0105243_10462018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1194	Open in IMG/M
3300009148\|Ga0105243_12183789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	590	Open in IMG/M
3300009156\|Ga0111538_12141438	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300009162\|Ga0075423_12354518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009176\|Ga0105242_11584791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300009177\|Ga0105248_10061944	All Organisms → cellular organisms → Bacteria → Acidobacteria	4201	Open in IMG/M
3300009177\|Ga0105248_11276915	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300009610\|Ga0105340_1368909	Not Available	637	Open in IMG/M
3300010375\|Ga0105239_13257396	Not Available	529	Open in IMG/M
3300010400\|Ga0134122_12768943	Not Available	543	Open in IMG/M
3300010401\|Ga0134121_13225312	Not Available	504	Open in IMG/M
3300011119\|Ga0105246_10885580	Not Available	799	Open in IMG/M
3300011439\|Ga0137432_1147462	Not Available	755	Open in IMG/M
3300012038\|Ga0137431_1149665	Not Available	666	Open in IMG/M
3300012882\|Ga0157304_1109951	Not Available	514	Open in IMG/M
3300012892\|Ga0157294_10136964	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300012897\|Ga0157285_10155246	Not Available	684	Open in IMG/M
3300012901\|Ga0157288_10019058	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300012903\|Ga0157289_10018134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	1496	Open in IMG/M
3300012904\|Ga0157282_10392387	Not Available	518	Open in IMG/M
3300012910\|Ga0157308_10027298	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300012913\|Ga0157298_10171230	Not Available	670	Open in IMG/M
3300012951\|Ga0164300_10439519	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300012957\|Ga0164303_10059031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1739	Open in IMG/M
3300012957\|Ga0164303_10920199	Not Available	614	Open in IMG/M
3300012960\|Ga0164301_11807969	Not Available	514	Open in IMG/M
3300013297\|Ga0157378_11040250	Not Available	854	Open in IMG/M
3300013306\|Ga0163162_10281228	All Organisms → cellular organisms → Bacteria	1796	Open in IMG/M
3300014325\|Ga0163163_10149508	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp. TBR-22	2380	Open in IMG/M
3300014326\|Ga0157380_12896129	Not Available	546	Open in IMG/M
3300014968\|Ga0157379_10978262	Not Available	806	Open in IMG/M
3300015200\|Ga0173480_10236225	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300015371\|Ga0132258_10461956	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300015372\|Ga0132256_103015988	Not Available	566	Open in IMG/M
3300015373\|Ga0132257_102122438	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300015374\|Ga0132255_100135059	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3415	Open in IMG/M
3300018466\|Ga0190268_12232464	Not Available	513	Open in IMG/M
3300018476\|Ga0190274_11244201	Not Available	829	Open in IMG/M
3300019361\|Ga0173482_10063195	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300020016\|Ga0193696_1004477	All Organisms → cellular organisms → Bacteria	3947	Open in IMG/M
3300023067\|Ga0247743_1045451	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300025315\|Ga0207697_10000700	All Organisms → cellular organisms → Bacteria	19071	Open in IMG/M
3300025315\|Ga0207697_10183756	Not Available	917	Open in IMG/M
3300025908\|Ga0207643_10658926	Not Available	675	Open in IMG/M
3300025919\|Ga0207657_11207470	Not Available	575	Open in IMG/M
3300025924\|Ga0207694_11385921	Not Available	594	Open in IMG/M
3300025926\|Ga0207659_10212728	All Organisms → cellular organisms → Bacteria	1550	Open in IMG/M
3300025930\|Ga0207701_10014890	All Organisms → cellular organisms → Bacteria → Acidobacteria	7544	Open in IMG/M
3300025934\|Ga0207686_10407498	Not Available	1037	Open in IMG/M
3300025940\|Ga0207691_10035552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4622	Open in IMG/M
3300025960\|Ga0207651_10735235	Not Available	871	Open in IMG/M
3300025961\|Ga0207712_10624771	Not Available	934	Open in IMG/M
3300026075\|Ga0207708_11124026	Not Available	685	Open in IMG/M
3300026089\|Ga0207648_10382011	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300026812\|Ga0207518_101207	Not Available	767	Open in IMG/M
3300027821\|Ga0209811_10037142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1635	Open in IMG/M
3300027873\|Ga0209814_10102358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300027880\|Ga0209481_10044350	Not Available	2046	Open in IMG/M
3300027886\|Ga0209486_10137464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1334	Open in IMG/M
3300027907\|Ga0207428_10409896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_65_8	992	Open in IMG/M
3300027909\|Ga0209382_10140970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2800	Open in IMG/M
3300028380\|Ga0268265_10952393	Not Available	846	Open in IMG/M
3300028380\|Ga0268265_11672198	Not Available	642	Open in IMG/M
3300028592\|Ga0247822_11410615	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300028809\|Ga0247824_10812803	Not Available	578	Open in IMG/M
3300031538\|Ga0310888_10196549	All Organisms → cellular organisms → Bacteria → Acidobacteria	1106	Open in IMG/M
3300031716\|Ga0310813_10434319	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300031740\|Ga0307468_102245884	Not Available	529	Open in IMG/M
3300032012\|Ga0310902_10524430	Not Available	776	Open in IMG/M
3300032012\|Ga0310902_11094903	Not Available	557	Open in IMG/M
3300032013\|Ga0310906_11179991	Not Available	556	Open in IMG/M
3300032157\|Ga0315912_10769669	Not Available	766	Open in IMG/M
3300033412\|Ga0310810_10018815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	8293	Open in IMG/M
3300033550\|Ga0247829_10837179	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300034115\|Ga0364945_0160640	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300034819\|Ga0373958_0162349	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	53.90%
Environmental	Environmental	45.39%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	53.19%
Terrestrial	Environmental → Terrestrial	43.26%
Aquatic	Environmental → Aquatic	2.13%
Human	Host-Associated → Human	0.71%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.17%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.31%
Sediment	Environmental → Aquatic → Sediment	2.13%
Floodplain	Environmental → Terrestrial → Floodplain	0.71%
Digestive System	Host-Associated → Human → Digestive System	0.71%
Roots	Host-Associated → Plants → Roots	0.71%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.13%
Loam	Environmental → Terrestrial → Soil → Loam	1.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.71%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.95%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.71%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.71%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.26%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.84%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.13%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.71%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026812	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-10 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_02229590	2170459021	Switchgrass, Maize And Mischanthus Litter	MLTLRALGTSGSQVIGQVIRSELYRYEVIGLPTGSGAMLARLSGVWKILRIERGKGYAWNGSFASAEDALASLDGDVPVSN
ICCgaii200_09373721	2228664021	Soil	TDPPRVKRSALVRYCTALRVKKVDNSSVLTLRPLATSGSGPVIGSEPYRYEVIGLPTGRGAMLARLSGVWKILEIEAGKTSAWTGSXXXAXDALTSLEGDISTPN
ICCgaii200_09377081	2228664021	Soil	VKRSALVRYCTALRVKKVDNSSVLTLRPLATSGSGPVIGSEPYRYEVIGLPTGRGAMLARLSGVWKILEIEAGKTSAWTGSFVSAHDALTSLEGDLGTSN
ICCgaii200_09382192	2228664021	Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNCAWTGSFISADDALTSLEGDISTPN
JGI11643J11755_115770512	3300000787	Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLAXLSGVWKILKIEXGKXYAWTGSFVSADDALTSLEGDISTPN*
JGI1027J11758_121738642	3300000789	Soil	MAPMLRLRALGTSGSQGIGQVIRSEPYRYEVLGLPPGSGAMLARLAGVWKVLRIERDKYYGWDGSFRSAEDALASIYGHKAHRRRTVQRNTTAS*
JGI1027J11758_124307612	3300000789	Soil	MLTLRALGTSGSQAIGQFIRSEPYRYEVIGLPTGSGAMLARLSGVWKILRIARGKYRAWSGSFVSAEDALASIDGCXAHRLRTXQRLQE*
JGI11643J12802_108097891	3300000890	Soil	TSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
JGI1027J12803_1013935844	3300000955	Soil	MLTLRALGTSGSQAIGQFIRSEPYRYEVIGLPTGSGAMLARLSGVWKILRIERGKYRAWSGSFVSAEDALASIDGCKAHRLRTVQRLQE*
JGI10216J12902_1123320553	3300000956	Soil	MLTLRRLGSGSVVESEPYRYEVVGLPAGSGAMLAKLSGVWKILKIESGKYYAWTGSFVSADAALTSLAGDVDTSG*
JGI24036J26619_100292773	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MLTLRALGTSGSGXVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN*
JGIcombinedJ43975_100375121	3300002899	Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0062593_1026819822	3300004114	Soil	MLTLRALGTSGSLGIGQVIRSEPFRYEVIGLPTGSGAMLARLSGVWKILRIERGQCYAWTGSFVSAEDALASIDGEVPISN*
Ga0062589_1016914202	3300004156	Soil	MLTLRALGTSGSQVIGQVIRSEPYRYEVIGLPNGSGAMLARLSGVWKVLKIERGKGHAWNGSFASAEDALGSLDGLVKGALLVPVRS*
Ga0062589_1020149521	3300004156	Soil	MLTLRALGTSGSQGIGQVIRSEPYRYEVIGLPTGSGAMLARLSGVWKVLRVERGKYYAWDGSFVSAEDALASIDGHKAPRRRTAEHLRP*
Ga0063356_1003248163	3300004463	Arabidopsis Thaliana Rhizosphere	MASMLTLRPLRISGSGPVIGSEPYRYEVIGLPAGRGAMLARLSGVWKILKIEPGRFHAWTGSFGSAEDALASIVGEVPISN*
Ga0063356_1003966383	3300004463	Arabidopsis Thaliana Rhizosphere	MKNVDNGSVLTLRPLGTRGSGPVIGSEPYRYEVIGLPTGRGAMLAKLSGVWKVLKIEAGKNSAWTGSFVSADDALASLKGDVGTSN*
Ga0063356_1004466972	3300004463	Arabidopsis Thaliana Rhizosphere	MLTLRALGTSGSQVIGQVIRSEPYRYEVLGLPTGSGAMLARLSGVWKILRIERGKGYAWNGSFASAEDALASLDGDVPVSN*
Ga0063356_1032971322	3300004463	Arabidopsis Thaliana Rhizosphere	MHEVDNAAMLTLRPLSGSGPVIGSEPYRYEVIGLPNGRGAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGISN*
Ga0063356_1046104202	3300004463	Arabidopsis Thaliana Rhizosphere	MLTLRTLEISGGEPYQYDVIGLPTGRGAMLARLSGVWKILKIERGKSYAWTGSFVSADDALTSLGDDVGTSN*
Ga0062592_1008547161	3300004480	Soil	MLTLRALGTSGSGQVIGQVLGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSHAWTGSFVSAEDALASIDGKVAISN*
Ga0062591_1017664341	3300004643	Soil	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKGYAWNGSFASAEDA
Ga0058860_105472032	3300004801	Host-Associated	LTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0065714_101903272	3300005288	Miscanthus Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN*
Ga0065715_103382682	3300005293	Miscanthus Rhizosphere	MLTLRALGTSGSQIIGQVIRSEPYRYEVIGLPNGSGAMLARLSGVWKVLKIERGKGYAWNGSFASAEDALASLVAS*
Ga0070676_100564092	3300005328	Miscanthus Rhizosphere	MNKVDNGSMLHCTLEIDEGEPYRFEVIGLPAGRGAMLARLSGVWKILKIERGKSHAWTGSFISADDALTSLAGDV*
Ga0070670_1000202543	3300005331	Switchgrass Rhizosphere	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN*
Ga0070687_1003945041	3300005343	Switchgrass Rhizosphere	VDNGSMLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0070675_1000494083	3300005354	Miscanthus Rhizosphere	MLTLRALGTSGSGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN*
Ga0070673_1002466272	3300005364	Switchgrass Rhizosphere	SGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN*
Ga0070667_1005852542	3300005367	Switchgrass Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN*
Ga0068867_1011807691	3300005459	Miscanthus Rhizosphere	MLTLRALGTSGSQVIGQVIGLDPYRYEVVGLPTGSAAMLARLSGVWKILRVERGKYHAWNGSFVSAEDALASIDGHKAHRRRTVQRMQE*
Ga0073909_100608392	3300005526	Surface Soil	MLTLRALGTSGTKVIGQVIGSDLYRYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAEDALASIDGKVPISN*
Ga0070672_1000633481	3300005543	Miscanthus Rhizosphere	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGR
Ga0070664_1014789553	3300005564	Corn Rhizosphere	MNGVDNGSMLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0068854_1019828361	3300005578	Corn Rhizosphere	GSMLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARFSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0068852_1008089504	3300005616	Corn Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDI
Ga0068852_1016711462	3300005616	Corn Rhizosphere	RALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN*
Ga0068861_1010782492	3300005719	Switchgrass Rhizosphere	MNKVDNGSMLHPQLEIDEGEPYRFEVIGLPAGRGAMLARLSGVWKILKIERGKSHAWTGSFISADDALTHLRGMYRHFRV
Ga0068862_1009513221	3300005844	Switchgrass Rhizosphere	MLTLRRLGISGSGSVIESEPYRYEVVGLPTGRGAMLARLSGVWKILKIESGKYYAWTGSFLSADDALASLDGVVDTSG*
Ga0075417_101818093	3300006049	Populus Rhizosphere	MHKVDNGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNERAAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGIS
Ga0075432_105480152	3300006058	Populus Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDALTSLEGDISTPN*
Ga0075422_100320362	3300006196	Populus Rhizosphere	MLTLRTLMISGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0075428_1000286675	3300006844	Populus Rhizosphere	MLTLRTLLTSGGQPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDALTSLEGDISSPN*
Ga0075428_1008986161	3300006844	Populus Rhizosphere	MHKVDNGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNERAAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLM
Ga0075421_1000127648	3300006845	Populus Rhizosphere	MLTLRTLLTSGGQPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDALTSLERDISSPN*
Ga0075421_1003819512	3300006845	Populus Rhizosphere	MHNVDNGAMLTLRPLSGSGPVVGSEPYRYEVIGLPNGCGAMLARLSGVWKILRIEPGKNYAWTGTFVSPDDALTSLMGDVGISNWDSAPSGEPVIAADRTAVRT*
Ga0075421_1012251692	3300006845	Populus Rhizosphere	MHNVDNGAMLTLRPLSGSGPVVGSEHYRYEVIGLPNGRGAMLARLSGVWKILRIEPGKNYAWTGSFVSPDDALTSLRGDVGISN*
Ga0075431_1001751962	3300006847	Populus Rhizosphere	MHNVDNGAMLTLRPLSGSGPVVGSEPYRYEVIGLPNGCGAMLARLSGVWKILRIEPGKNYAWTGTFVILMMRSLHLWAM*
Ga0075431_1017479472	3300006847	Populus Rhizosphere	MHKVDNGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNERGAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGISN*
Ga0075420_1000162926	3300006853	Populus Rhizosphere	RVDNGSMLTLRTLLTSGGQPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDALTSLEGDISSPN*
Ga0075425_1004236512	3300006854	Populus Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASI
Ga0075429_1001423551	3300006880	Populus Rhizosphere	MLTLRTLLTSGGQPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDA
Ga0079215_101105202	3300006894	Agricultural Soil	MLTLRPLEISEGEPYQYEVIGLPNGRGAMLARLFGVWKILKIEPGKYFDWTGSFVSADDALASLEAI*
Ga0075424_1002634511	3300006904	Populus Rhizosphere	RVDNGSMLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0075419_101205542	3300006969	Populus Rhizosphere	MVSCIAQFLGCTKVDNGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNGRGAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGISN*
Ga0079218_101595332	3300007004	Agricultural Soil	MLTLRALAICGGEPYQYEVIGLPAGRGAMLARLSGVWKVLKIERGKSYAWTGRFVSADDALTSLERDVGT*
Ga0079218_102136861	3300007004	Agricultural Soil	MNEVDNGSMLTLRPLEISEGEPYQYEVIGLPTGRGAMLARLSGVWKILKIEPGKYFDWTGSFVSADDALASLEAI*
Ga0079218_109609211	3300007004	Agricultural Soil	MLTLRKLEISGGGPEPYRYEVIGLPTGRGAMLARLSGVWKVLKIEPGKNYAWTGSFVSADDALTSLESDV*
Ga0079218_116718801	3300007004	Agricultural Soil	MLTLRTLEISEGEPYRYEVIGLPTGRGAMLARLSGVWKILKIEAGKNYAWTGSFVSADDALTSLEGD*
Ga0079218_124200041	3300007004	Agricultural Soil	TSGSVIGSEPYRYEVIGLPAGTGAMLARLSGVWKILRIEPGKFCAWTGSFVSAEDALASIRGEVPISN*
Ga0075435_1012008951	3300007076	Populus Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKSHAWTGSFVSADDALTSLEGDVDTKN*
Ga0111539_101274442	3300009094	Populus Rhizosphere	MISGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKSHAWTGSFVSADDALTSLEGDVDTKN*
Ga0114129_105149921	3300009147	Populus Rhizosphere	MHEVDNAAMLTLRPLSGSGPVIGSEPYRYEVIGLPNGRGAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGD
Ga0114129_117451891	3300009147	Populus Rhizosphere	MHKVDNGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNERAAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGD
Ga0105243_104620182	3300009148	Miscanthus Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGKVSISN*
Ga0105243_121837891	3300009148	Miscanthus Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALT
Ga0111538_121414382	3300009156	Populus Rhizosphere	MALMLTLRRLGISGSDSVIESEPYRYEVVGLPTGRGAMLARLLGVWKILKIEPGKYHAWTGSFLSADDALTSLEGGLHTSD*
Ga0075423_123545182	3300009162	Populus Rhizosphere	NGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNGRGAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGISN*
Ga0105242_115847912	3300009176	Miscanthus Rhizosphere	TLRALGTSGSRVIGQVIGSDPYRYEVIGLPTGSGAMLARLSGVWKILRIERGKYSAWNGSFVSAEDALASINGHKAHRRRTVQRMQD*
Ga0105248_100619444	3300009177	Switchgrass Rhizosphere	TLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN*
Ga0105248_112769151	3300009177	Switchgrass Rhizosphere	MLTLRALGTSGSLGIGRVIRSEPFRYEVIGLPTGSGAMLARLSGVWKILRIERGKYHAWNGSFVSAEDALASIDGHKAQAVGLEVLPSLSAKHHR*
Ga0105340_13689092	3300009610	Soil	MLTLRTLGTSESGPVIGSEPYRYDVVGLPTGSGAMLARLSGVWKILRIEPGKYYAWTGSFVSAEDALASIDGKVPISN*
Ga0105239_132573961	3300010375	Corn Rhizosphere	DNGSMLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0134122_127689431	3300010400	Terrestrial Soil	MLTLRTLGISGSGPVIGSYSYQVVGLPEGRGAMLARLSGVWKILKIERGKQYAWTGSFRSANAALTSLKGDVDTSN*
Ga0134121_132253121	3300010401	Terrestrial Soil	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSYAWTGSFVTAKDALASIDGKVPISN*
Ga0105246_108855801	3300011119	Miscanthus Rhizosphere	TRAHNGSMLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN*
Ga0137432_11474622	3300011439	Soil	MNEVHNGSMLTLRTLVGTSGSGPVIWSGPYLYEVIGLPTGRGAMLAKLSGVWKILKIERGKNYGWTGSFVSADDALTSLEGDVGTSN*
Ga0137431_11496652	3300012038	Soil	MNKVDNGSMLTLRPLGPEPYRYEVIGLPTGRGAMLARLSGVWKILKIEAGKNYGWTGSFVSADDALISLEGDVSTSN*
Ga0157304_11099512	3300012882	Soil	MLTLRALGTSGSQGIGQVIRSEPYRYEVIGLPTGSGAMLARLSGVWKVLRVERGKYYAWDGSFVSAEDALASIDGHKAHRRRTVQRMQE*
Ga0157294_101369641	3300012892	Soil	MLTLRALGTSGSQVIGQVIRSEPYRYEVIGLPNGSGAMLARLSGVWKVLKIERGKGHAWNGSFASAEDALGSLDG
Ga0157285_101552462	3300012897	Soil	MLTLRTLETSGGKPYQYDVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0157288_100190582	3300012901	Soil	MLTLRALGTSGSQVIGQVIRSEPYRYEVIGLPNGSGAMLARLSGVWKVLKIERGKGYAWNGSFASAEDALASLDGLVKGALLVPVRS*
Ga0157289_100181342	3300012903	Soil	MLTLRALGTSGSPRIGQVIRSEPYRYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN*
Ga0157282_103923872	3300012904	Soil	MISGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0157308_100272983	3300012910	Soil	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSI
Ga0157298_101712302	3300012913	Soil	MLTLRALGTSGSQVIGQVIRSELYRYEVIGLPTGSGAMLARLSGVWKILRIERGKGYAWNGSFASAEDAL
Ga0164300_104395192	3300012951	Soil	MLTLRALGTSGSCHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGHKAH*
Ga0164303_100590312	3300012957	Soil	MLTLRALGTSGSQVIGQVIRSEPYRYEVLGLPTGSGAMLARLAGVWKVLRIERGKGYAWNGSFASAEDALASLDGDVPVSH*
Ga0164303_109201991	3300012957	Soil	MLTLRTLGISGSGSVIGSYSYQVVGLPAGRGAMLARLSGVWKILKIEPGKNYAWTGSFVSADDALTSLEGDVDTSRLRQGPRVTSPDNRPYK
Ga0164301_118079691	3300012960	Soil	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGESYAWTGSFVSAEDALASLDGDVPVSH*
Ga0157378_110402502	3300013297	Miscanthus Rhizosphere	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSIAN*
Ga0163162_102812282	3300013306	Switchgrass Rhizosphere	MLTLRALGTSGSLGIGQVIRSEPFRYEVIGLPTGSGAMLARLSGVWKILRIERGKYSAWNGSFVSAEDALASIDGHKAQAVGLEVLPSLSAKHLR*
Ga0163163_101495082	3300014325	Switchgrass Rhizosphere	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN*
Ga0157380_128961291	3300014326	Switchgrass Rhizosphere	MLTLRRLGISGSGSVIESEPYRYEVVGLPTGRGAMLARLSGVWKILKIEPGKYYAWTGSFLSADDALASLDGVVDTSG*
Ga0157379_109782622	3300014968	Switchgrass Rhizosphere	MLTLRTLGISGSGPVIGSYSYQVVGLPAGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN*
Ga0173480_102362253	3300015200	Soil	MLTLRALGTSGSQVIGQVIRSELYRYEVIGLPTGSGAMLARLSGVWKILRIERGKGYAWNGSFASAEDALGSLDGLVKGALLVPVRS*
Ga0132258_104619563	3300015371	Arabidopsis Rhizosphere	MISGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKSHAWTGSFVSADDALTSLEGDVGTKN*
Ga0132256_1030159881	3300015372	Arabidopsis Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGKVPISN*
Ga0132257_1021224382	3300015373	Arabidopsis Rhizosphere	MLTLRALGTSGSQVIGQVIRSDPYRYEVVGLPTGSGAMLARLSGVWKILRIERGRSYAWTGSFVTAKDALASIDGRVPISN*
Ga0132255_1001350591	3300015374	Arabidopsis Rhizosphere	QGRQWLHAALRTLEIDEGEPYRFEVIGLPAGRGAMLARLSGVWKILKIERGKSHAWTGSFISADDALTSLAGDV*
Ga0190268_122324641	3300018466	Soil	MLTLRTLAISEGEPYRYEVIGLPAGRGAMLARLSGVWKILKIEAGKHYAWTGSFVSADDALTSLEGDVSTSN
Ga0190274_112442012	3300018476	Soil	MLTLRRLGISGSGSVIESEPYRYEVVGLPTGRGAMLARLSGVWKILKIEPGKYYAWTGSFLSADDALASLDGVVDTSG
Ga0173482_100631953	3300019361	Soil	MLTLRALGTSGSQVIGQVIRSEPYRYEVIGLPNGSGAMLARLSGVWKVLKIERGKGHAWNGSFASAEDALGSLDGLVKGALLVPVRS
Ga0193696_10044777	3300020016	Soil	MLTLRALGTSGSQVIGQVIGSDLYRYEVIGLPTGSGAMLARLSGVWKILKIERGKSHAWTGSFVSAKDALASIEGKAPISN
Ga0247743_10454511	3300023067	Soil	RSEPYRYEVIGLPNGSGAMLARLSGVWKVLKIERGKGHAWNGSFASAEDALGSLDGLVKGALLVPVRS
Ga0207697_1000070010	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDISTPN
Ga0207697_101837561	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0207643_106589261	3300025908	Miscanthus Rhizosphere	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0207657_112074703	3300025919	Corn Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWRILKIERGKNYAWTGSFVSADDALTSLEGDISTPN
Ga0207694_113859211	3300025924	Corn Rhizosphere	MLTLRALGTSGSGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0207659_102127281	3300025926	Miscanthus Rhizosphere	MLTLRALGTSGSCHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN
Ga0207701_100148902	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN
Ga0207686_104074982	3300025934	Miscanthus Rhizosphere	MLTLRALGTSGSCHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0207691_100355524	3300025940	Miscanthus Rhizosphere	MLTLRALGTSGSGHVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDSRASISN
Ga0207651_107352351	3300025960	Switchgrass Rhizosphere	TSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0207712_106247712	3300025961	Switchgrass Rhizosphere	HDGRTHGVPYRTVSAITRAHNGSMLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0207708_111240261	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MASMLTLRPLRISGSGPVIGSEPYRYEVIGLPAGRGAMLARLSGVWKILKIEPGRFHAWTGSFGSAEDALASIVGEVPISN
Ga0207648_103820112	3300026089	Miscanthus Rhizosphere	MNEVDNSSMLTLRTLEIGEREPYRFEVIGLPTGRGAMLARLSGVWKILKIERGKSYAWTGSFVSADAALTSLASEA
Ga0207518_1012072	3300026812	Soil	MLTLRTLLTSGGEPYQYEVIGLPNGSGAMLARLSGVWKVLKIERGKGHAWNGSFASAEDALGSLDGLVKGALLVPVRS
Ga0209811_100371423	3300027821	Surface Soil	MLTLRALGTSGTKVIGQVIGSDLYRYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAEDALASIDGKVPISN
Ga0209814_101023581	3300027873	Populus Rhizosphere	MHKVDNGAMLTLRPLSGSGPVIGSEPYRYEVIGLPNERAAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGISN
Ga0209481_100443501	3300027880	Populus Rhizosphere	MLTLRTLLTSGGQPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDALTSLEGDISSPN
Ga0209486_101374642	3300027886	Agricultural Soil	MLTLRALAICGGEPYQYEVIGLPAGRGAMLARLSGVWKVLKIERGKSYAWTGRFVSADDALTSLEGDVGTSD
Ga0207428_104098962	3300027907	Populus Rhizosphere	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKTYAWTGSFVSADDALTSLEGDISTPN
Ga0209382_101409703	3300027909	Populus Rhizosphere	MHNVDNGAMLTLRPLSGSGPVVGSEHYRYEVIGLPNGRGAMLARLSGVWKILRIEPGKNYAWTGSFVSRDDALTSLMGDVGISN
Ga0268265_109523931	3300028380	Switchgrass Rhizosphere	MLTLRRLGISGSGSVIESEPYRYEVVGLPTGRGAMLARLSGVWKILKIESGKYYAWTGSFLSADDALASLDGVVDTSG
Ga0268265_116721981	3300028380	Switchgrass Rhizosphere	SGSGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRVSISN
Ga0247822_114106153	3300028592	Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGDIS
Ga0247824_108128032	3300028809	Soil	MLTLRTLETSGGKPYQYDVIGLPTGRGAMLARLSGVWKVLKIERGKSYAWSGSFVSADDALTSLRDDVGTSN
Ga0310888_101965493	3300031538	Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLDGDISTPN
Ga0310813_104343192	3300031716	Soil	SGSGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKGYAWNGSFASAEDALASLDGDVPVSN
Ga0307468_1022458842	3300031740	Hardwood Forest Soil	MLTLRALGTSGSGQVIGQVLGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSYAWTGSFVSAEDALASIDGKVPISN
Ga0310902_105244302	3300032012	Soil	MLTLRTLEISGGEPYQYDVIGLPTGRGAMLARLSGVWKILKIERGKSYAWTGSFVSAGDALTSLGDDVGTSN
Ga0310902_110949032	3300032012	Soil	MLTLRALGTSGSGQVIGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALA
Ga0310906_111799912	3300032013	Soil	IGQVIGSDPYQYEVIGLPTGSGAMLARLSGVWKILRIERGKSCAWTGSFVSAKDALASIDGRASISN
Ga0315912_107696691	3300032157	Soil	MLTLRTLETGAGEPYRFEVIGLPTGRGAMLARLSGVWKILKIERGKSYGWTGSFVSADDALTSLAGDV
Ga0310810_100188153	3300033412	Soil	MLTLRALGTSGSQGIGQVTRSEPYRYEVIGLPTGSGAMLARLSGVWKVLRVERGKYYAWDGSFVSAEDALASIDGHKAPRRRTAKT
Ga0247829_108371794	3300033550	Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALTSLEGD
Ga0364945_0160640_258_494	3300034115	Sediment	MLTLRALGISESGPVIGSESYRYEVIGLPTGSGAMLARLSGVWKILRIEPGNFYAWTGSFVSAEDALASIDGEVPISN
Ga0373958_0162349_213_431	3300034819	Rhizosphere Soil	MLTLRTLLTSGGEPYQYEVIGLPTGRGAMLARLSGVWKILKIERGKNYAWTGSFVSADDALISLEGDISTPN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053376

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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