Metagenome / Metatranscriptome Family F053191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	63 residues
Representative Sequence	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPSTG
Number of Associated Samples	106
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.98 %
% of genes near scaffold ends (potentially truncated)	21.99 %
% of genes from short scaffolds (< 2000 bps)	78.01 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.071 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.950 % of family members)
Environment Ontology (ENVO)	Unclassified (48.227 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.064 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.73% β-sheet: 0.00% Coil/Unstructured: 52.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01464	SLT	24.11
PF05378	Hydant_A_N	4.96
PF00296	Bac_luciferase	4.26
PF00011	HSP20	3.55
PF13474	SnoaL_3	2.84
PF02201	SWIB	2.13
PF00072	Response_reg	1.42
PF07690	MFS_1	1.42
PF01844	HNH	1.42
PF13191	AAA_16	0.71
PF13458	Peripla_BP_6	0.71
PF17186	Lipocalin_9	0.71
PF00196	GerE	0.71
PF17167	Glyco_hydro_36	0.71
PF05362	Lon_C	0.71
PF00903	Glyoxalase	0.71
PF12127	FloA	0.71
PF02720	DUF222	0.71
PF00005	ABC_tran	0.71
PF07969	Amidohydro_3	0.71
PF01408	GFO_IDH_MocA	0.71
PF01061	ABC2_membrane	0.71
PF02190	LON_substr_bdg	0.71
PF01258	zf-dskA_traR	0.71
PF09650	PHA_gran_rgn	0.71
PF13633	Obsolete Pfam Family	0.71
PF07589	PEP-CTERM	0.71
PF05973	Gp49	0.71
PF03928	HbpS-like	0.71
PF12698	ABC2_membrane_3	0.71
PF14588	YjgF_endoribonc	0.71
PF09411	PagL	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	9.93
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	4.26
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	3.55
COG5531	DNA-binding SWIB/MDM2 domain	Chromatin structure and dynamics [B]	2.13
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.71
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.71
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.71
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.71
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.07 %
Unclassified	root	N/A	9.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.07 %
Unclassified	root	N/A	9.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.07 %
Unclassified	root	N/A	9.93 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	41.84 %
Unclassified	root	N/A	9.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.67 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	41.84 %
Unclassified	root	N/A	9.93 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.42 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	39.72 %
Unclassified	root	N/A	9.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	33.33 %
Unclassified	root	N/A	9.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Unclassified	root	N/A	9.93 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	33.33 %
Unclassified	root	N/A	9.93 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.71 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10028860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1963	Open in IMG/M
3300002908\|JGI25382J43887_10013181	All Organisms → cellular organisms → Bacteria	4273	Open in IMG/M
3300002917\|JGI25616J43925_10333093	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005166\|Ga0066674_10054305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1813	Open in IMG/M
3300005166\|Ga0066674_10076674	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1535	Open in IMG/M
3300005171\|Ga0066677_10127115	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1377	Open in IMG/M
3300005176\|Ga0066679_10380730	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	924	Open in IMG/M
3300005180\|Ga0066685_10140719	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1635	Open in IMG/M
3300005184\|Ga0066671_10644517	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	688	Open in IMG/M
3300005186\|Ga0066676_10008663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4899	Open in IMG/M
3300005406\|Ga0070703_10336446	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005444\|Ga0070694_100754856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300005445\|Ga0070708_100240506	All Organisms → cellular organisms → Bacteria	1699	Open in IMG/M
3300005447\|Ga0066689_10860240	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005451\|Ga0066681_10433771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	807	Open in IMG/M
3300005518\|Ga0070699_100325109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1383	Open in IMG/M
3300005518\|Ga0070699_100764058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	884	Open in IMG/M
3300005536\|Ga0070697_100059497	All Organisms → cellular organisms → Bacteria	3111	Open in IMG/M
3300005536\|Ga0070697_100857972	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	805	Open in IMG/M
3300005540\|Ga0066697_10004269	All Organisms → cellular organisms → Bacteria → Proteobacteria	6770	Open in IMG/M
3300005552\|Ga0066701_10022627	All Organisms → cellular organisms → Bacteria	3152	Open in IMG/M
3300005552\|Ga0066701_10609092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300005554\|Ga0066661_10031412	All Organisms → cellular organisms → Bacteria → Proteobacteria	2934	Open in IMG/M
3300005555\|Ga0066692_10087866	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300005557\|Ga0066704_10731566	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300005559\|Ga0066700_10268555	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005559\|Ga0066700_10405130	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300005566\|Ga0066693_10417718	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300005568\|Ga0066703_10121862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1551	Open in IMG/M
3300005575\|Ga0066702_10199742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1210	Open in IMG/M
3300005576\|Ga0066708_10209931	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300005587\|Ga0066654_10319380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300006034\|Ga0066656_10954188	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006049\|Ga0075417_10003748	All Organisms → cellular organisms → Bacteria → Proteobacteria	4881	Open in IMG/M
3300006049\|Ga0075417_10077612	Not Available	1479	Open in IMG/M
3300006049\|Ga0075417_10411151	Not Available	671	Open in IMG/M
3300006791\|Ga0066653_10122962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1221	Open in IMG/M
3300006797\|Ga0066659_10693821	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300006797\|Ga0066659_11859744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300006800\|Ga0066660_10354032	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1194	Open in IMG/M
3300006800\|Ga0066660_10370439	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1171	Open in IMG/M
3300006804\|Ga0079221_10176587	Not Available	1146	Open in IMG/M
3300006845\|Ga0075421_100837245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1056	Open in IMG/M
3300006845\|Ga0075421_101668610	Not Available	690	Open in IMG/M
3300006845\|Ga0075421_102788999	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300006853\|Ga0075420_100336099	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300006904\|Ga0075424_101331897	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300007255\|Ga0099791_10029229	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300007255\|Ga0099791_10160296	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1053	Open in IMG/M
3300007255\|Ga0099791_10534965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	570	Open in IMG/M
3300007258\|Ga0099793_10474759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300007265\|Ga0099794_10079372	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300007265\|Ga0099794_10204452	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1012	Open in IMG/M
3300009012\|Ga0066710_100262018	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300009012\|Ga0066710_101203284	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300009012\|Ga0066710_101595928	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300009147\|Ga0114129_10014061	All Organisms → cellular organisms → Bacteria	11401	Open in IMG/M
3300009147\|Ga0114129_12426033	Not Available	628	Open in IMG/M
3300009162\|Ga0075423_10320356	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1625	Open in IMG/M
3300010080\|Ga0127448_120301	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300010085\|Ga0127445_1049118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	878	Open in IMG/M
3300010301\|Ga0134070_10183150	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300010336\|Ga0134071_10023820	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300010364\|Ga0134066_10122638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300010896\|Ga0138111_1139579	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300012189\|Ga0137388_11282759	Not Available	671	Open in IMG/M
3300012202\|Ga0137363_11675951	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300012203\|Ga0137399_10381022	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1175	Open in IMG/M
3300012203\|Ga0137399_10395512	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300012203\|Ga0137399_10702741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	851	Open in IMG/M
3300012203\|Ga0137399_11169068	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	648	Open in IMG/M
3300012208\|Ga0137376_10096759	All Organisms → cellular organisms → Bacteria	2496	Open in IMG/M
3300012208\|Ga0137376_10824659	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300012351\|Ga0137386_10343057	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300012361\|Ga0137360_10095379	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300012362\|Ga0137361_10183569	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300012380\|Ga0134047_1060741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1084	Open in IMG/M
3300012393\|Ga0134052_1321830	Not Available	566	Open in IMG/M
3300012396\|Ga0134057_1006387	Not Available	621	Open in IMG/M
3300012398\|Ga0134051_1354079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	971	Open in IMG/M
3300012582\|Ga0137358_10166186	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300012582\|Ga0137358_10621270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300012918\|Ga0137396_10239811	All Organisms → cellular organisms → Bacteria	1336	Open in IMG/M
3300012918\|Ga0137396_10243952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1324	Open in IMG/M
3300012918\|Ga0137396_10258867	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1284	Open in IMG/M
3300012918\|Ga0137396_10477754	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	924	Open in IMG/M
3300012918\|Ga0137396_10552923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300012922\|Ga0137394_10399790	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300012923\|Ga0137359_10397696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1222	Open in IMG/M
3300012927\|Ga0137416_10704234	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	887	Open in IMG/M
3300012927\|Ga0137416_11186433	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012929\|Ga0137404_11724143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	582	Open in IMG/M
3300012930\|Ga0137407_10183410	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300012944\|Ga0137410_11823337	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300012975\|Ga0134110_10226638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	790	Open in IMG/M
3300012976\|Ga0134076_10000297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12339	Open in IMG/M
3300012977\|Ga0134087_10288677	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300014166\|Ga0134079_10219248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	807	Open in IMG/M
3300015356\|Ga0134073_10010465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2063	Open in IMG/M
3300015357\|Ga0134072_10409958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300017656\|Ga0134112_10200391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300017659\|Ga0134083_10020933	Not Available	2308	Open in IMG/M
3300018431\|Ga0066655_10050723	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300018433\|Ga0066667_10736803	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300020170\|Ga0179594_10014595	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300020170\|Ga0179594_10111279	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300024330\|Ga0137417_1401971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	778	Open in IMG/M
3300025939\|Ga0207665_11086089	Not Available	638	Open in IMG/M
3300026296\|Ga0209235_1208731	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300026298\|Ga0209236_1129082	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1104	Open in IMG/M
3300026298\|Ga0209236_1290620	Not Available	528	Open in IMG/M
3300026313\|Ga0209761_1026891	All Organisms → cellular organisms → Bacteria	3506	Open in IMG/M
3300026318\|Ga0209471_1035074	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300026318\|Ga0209471_1039938	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300026323\|Ga0209472_1042627	All Organisms → cellular organisms → Bacteria	1996	Open in IMG/M
3300026324\|Ga0209470_1002007	All Organisms → cellular organisms → Bacteria	14653	Open in IMG/M
3300026325\|Ga0209152_10230492	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300026342\|Ga0209057_1013634	All Organisms → cellular organisms → Bacteria	4894	Open in IMG/M
3300026527\|Ga0209059_1040850	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300026529\|Ga0209806_1006805	All Organisms → cellular organisms → Bacteria → Proteobacteria	6370	Open in IMG/M
3300026530\|Ga0209807_1023472	All Organisms → cellular organisms → Bacteria	2997	Open in IMG/M
3300026551\|Ga0209648_10330520	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300026552\|Ga0209577_10044411	All Organisms → cellular organisms → Bacteria	3785	Open in IMG/M
3300026557\|Ga0179587_10439096	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300027511\|Ga0209843_1040213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	842	Open in IMG/M
3300027655\|Ga0209388_1030137	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300027873\|Ga0209814_10004102	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	5489	Open in IMG/M
3300027873\|Ga0209814_10045062	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1838	Open in IMG/M
3300027873\|Ga0209814_10133532	Not Available	1061	Open in IMG/M
3300027873\|Ga0209814_10296576	Not Available	704	Open in IMG/M
3300027909\|Ga0209382_10010858	All Organisms → cellular organisms → Bacteria	11328	Open in IMG/M
3300027909\|Ga0209382_12034014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	550	Open in IMG/M
3300028536\|Ga0137415_10043064	All Organisms → cellular organisms → Bacteria	4406	Open in IMG/M
3300028536\|Ga0137415_10567369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	945	Open in IMG/M
3300028878\|Ga0307278_10205002	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	879	Open in IMG/M
3300030606\|Ga0299906_10002838	All Organisms → cellular organisms → Bacteria	14308	Open in IMG/M
3300031548\|Ga0307408_102317860	Not Available	520	Open in IMG/M
3300031720\|Ga0307469_11057151	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300031820\|Ga0307473_10566625	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300032180\|Ga0307471_102872681	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300033407\|Ga0214472_10881786	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.23%
Host-Associated	Host-Associated	12.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.23%
Plants	Host-Associated → Plants	12.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.77%
Loam	Environmental → Terrestrial → Soil → Loam	6.38%
Sand	Environmental → Terrestrial → Soil → Sand	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.67%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010085	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100288603	3300002558	Grasslands Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPPK*
JGI25382J43887_100131813	3300002908	Grasslands Soil	MLKALLARVSFLRHRALSLSNRNDQLKADSDERRERWNRVIAEHQKPLDQPKGTSAPPK*
JGI25616J43925_103330931	3300002917	Grasslands Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTRSTGDASGSAPKR*
Ga0066674_100543053	3300005166	Soil	MLKALLSRVSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLDPPKDKSTR*
Ga0066674_100766743	3300005166	Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK*
Ga0066677_101271152	3300005171	Soil	MLKGLLARVPFFRQRPSALPHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR*
Ga0066679_103807302	3300005176	Soil	MLKGLLSRVPFFRQRTPALSHRNDQLKADSAERRERWDEVIAEHQKPLGPQPAASKPSTPSTGP*
Ga0066685_101407193	3300005180	Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAP
Ga0066671_106445171	3300005184	Soil	RSSSSGSMRSVMLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTTPSTPSTGP*
Ga0066676_100086635	3300005186	Soil	MLKALLSRVPFLRHHAPTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS*
Ga0070703_103364462	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MLKELLSRVSFLRHRALTLTHRKDQLKADSAERRDRWNQVIAEHQKPLDKPAGTSAPPTASSR*
Ga0070694_1007548561	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RSTMLKELLSRVSFLRHRALTLTHRKDQLKADSAERRDRWNQVIAEHQKPLDKPAGTSAPPTASSR*
Ga0070708_1002405063	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIKALLSRVPFFRQRSPALSHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAESTKGSSPTR*
Ga0066689_108602402	3300005447	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPPTGP*
Ga0066681_104337712	3300005451	Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTTPSTPSTGP*
Ga0070699_1003251092	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLKGLLSRVPFFRQRAPALSHHHDQLKADSAERRERWNEVIAEHQKPLGPQPAESTRSSGDASGSAPKR*
Ga0070699_1007640582	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLKELLSRVSSLRDLSLSLSHRKDQLKADSAERRDRWNQVIAEHQKPLDKQAGTSAPPK*
Ga0070697_1000594974	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLKELLSRVSSLRDRALSLSHRKDQLKTDSAERRDRWNQVIAEHQKPLDKQAGTSAPPK*
Ga0070697_1008579722	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLKGLLSRVPFFRQRAPALSHRHDQLKADSAERRERWNEVIAEHQKPLGPQPAESTRSSGDASGSAPKRRIRSAGALDDRS*
Ga0066697_100042697	3300005540	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASPPPTGP*
Ga0066701_100226273	3300005552	Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRQRWNQVIAEHQKPLDQQKGTSAPPK*
Ga0066701_106090922	3300005552	Soil	MLKGLLARVPFFRQRPSALPHRDDQLKADSAERRERWNEVIAEHQKPLGPQSAASARSTGDAPGSAPKR*
Ga0066661_100314121	3300005554	Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADFAERRERWDEVIAEHQKPLGPQPAASTP
Ga0066692_100878663	3300005555	Soil	MLKGLLARVPFFRQRPSALTHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR*
Ga0066704_107315662	3300005557	Soil	MLKALLARVSFLRHRALSLSNRNDQLKADSDERRQRWNQVIAEHQKPLDQQKGTSAPPK*
Ga0066700_102685553	3300005559	Soil	MLKGLLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPPK*
Ga0066700_104051302	3300005559	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPPSGDASGSAPKR*
Ga0066693_104177182	3300005566	Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAAST
Ga0066703_101218622	3300005568	Soil	MLKALLARVPFFRQRALTLSSRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR*
Ga0066702_101997421	3300005575	Soil	MLKALLARVPFFRQRALTLSSRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDAPGSAPKR*
Ga0066708_102099312	3300005576	Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPPTGP*
Ga0066654_103193801	3300005587	Soil	PMLKALLSRVSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLDPPKDKSTR*
Ga0066656_109541882	3300006034	Soil	MLKELLARVSFLRHRTLTLSHRNDQLKADSAERRERWNQVIAEHQKPLEKKAES*
Ga0075417_100037482	3300006049	Populus Rhizosphere	MLKALLARVSSLRHRALTLSHRNDQRKADSAERTERWNQVIAAAQKPADPQKGTSTSSK*
Ga0075417_100776121	3300006049	Populus Rhizosphere	MLKALLSRVPFLRRRAATHRNDQLKSDSDERRVRWNQVIAEHQNPMVPHKVTAAATETVTGSPPE*
Ga0075417_104111512	3300006049	Populus Rhizosphere	MLKALLFRVPFLRQRAVMLAQRNEQLKAESEERRARWNQVIADHQKPLEKQTSTSSPPK*
Ga0066653_101229621	3300006791	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAAPTPSTGP*
Ga0066659_106938212	3300006797	Soil	MLKALLARVPFFRQRALTLSSRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTP
Ga0066659_118597442	3300006797	Soil	MLKALLSRVSFLRRRTLTLSRNDQLQTDSAERRERWNQVIAEHQKLLDKDAA
Ga0066660_103540322	3300006800	Soil	MLKALLSRVSFLRRRTLTLSRNDQLQTDSAERRERWNQVIAEHQKPLDKDAAASAKAQTSAPPPN*
Ga0066660_103704392	3300006800	Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASKPSTPSTGP*
Ga0079221_101765872	3300006804	Agricultural Soil	MLKGLFSRISFLRRRARTLSHRNNRLKSDSDERRERWNQVIAEHQDPIASHKRTSTGTEAATSSPRE*
Ga0075421_1008372454	3300006845	Populus Rhizosphere	PQTNLSPEEVVMLKALLSRVSFLRQRAVMLAQRNEQMKAESDERRARWNQVIADQQKPLEKQTSTSSPPK*
Ga0075421_1016686102	3300006845	Populus Rhizosphere	MLKALLSRVPFLRRRAATHRNDQLKSDSDERRARWNQVIAEHQNPMVPHKVTAAATETVTGSPPE*
Ga0075421_1027889991	3300006845	Populus Rhizosphere	MLKALLSRVSFLRQRAMMLAHRNNQPKADAEERRERWNQVIAEHQKPLEKQTGTSSSPK*
Ga0075420_1003360992	3300006853	Populus Rhizosphere	MLKALLFRVPFLRQRAVMLAQRNEQMKAESDERRARWNQVIADQQKPLEKQTSTSSPPK*
Ga0075424_1013318971	3300006904	Populus Rhizosphere	MLKQLLSRVSFLRHRALSLSHRKDQLKTDSAERRDAWNQVIAEHQKPLDKQAGTSAPPK*
Ga0099791_100292291	3300007255	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTPSTGDASGSAPTR*
Ga0099791_101602963	3300007255	Vadose Zone Soil	MLKALLSRVPFFRQRASALSHRDDQLKADSAERRKGWNQVIAEHQKPLGPQKDKES*
Ga0099791_105349652	3300007255	Vadose Zone Soil	FFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTRSTGDASGSAPKR*
Ga0099793_104747591	3300007258	Vadose Zone Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPATSTPSTGP*
Ga0099794_100793722	3300007265	Vadose Zone Soil	MLKALLSRVSFFRQRALALSQRKDQLQADSAERRERWNQVIADHQKPLDQPKGPSTPPR*
Ga0099794_102044522	3300007265	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTPSTGDASGSVPKR*
Ga0066710_1002620183	3300009012	Grasslands Soil	MLKELLARVSFLRHRTLTLSHRNDQRKADSAERRERWNQVIAEHQKPLEKKAES
Ga0066710_1012032842	3300009012	Grasslands Soil	MLKGLLARVPFFRQRPSALPHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDAPGSAPKR
Ga0066710_1015959283	3300009012	Grasslands Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPP
Ga0114129_100140614	3300009147	Populus Rhizosphere	MIRALFSSASSFRQRALPLFHRNDQIKADSAERRERWKQVIAEHQKPLDQQKGTSTSSAGGP*
Ga0114129_124260332	3300009147	Populus Rhizosphere	MLKALLSRVSFLRQRAVTLAQRNDQLKADSEERRERWNQVIAEHQKPLEKQTGTSSSPK*
Ga0075423_103203562	3300009162	Populus Rhizosphere	MLKALLSRVSSLRHRALTLSHRNDQRKADSAERTERWNQVIAAAQKPADPQKGTSTSSK*
Ga0127448_1203011	3300010080	Grasslands Soil	KASTRSAMLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK*
Ga0127445_10491181	3300010085	Grasslands Soil	QTKASTRSAMLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK*
Ga0134070_101831502	3300010301	Grasslands Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR*
Ga0134071_100238202	3300010336	Grasslands Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDPQKGTSAPPK*
Ga0134066_101226382	3300010364	Grasslands Soil	MLKALLSRMSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLDPPKDKSTR*
Ga0138111_11395791	3300010896	Grasslands Soil	STRSAMLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK*
Ga0137388_112827591	3300012189	Vadose Zone Soil	MLKALLARVSFLRHRALSLSNRNDQLKADSVERLERWNRVIAEHQKPLDQPKGTSAPPK*
Ga0137363_116759511	3300012202	Vadose Zone Soil	MFKELLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPPPAASTRSSGDASGSAPKR*
Ga0137399_103810222	3300012203	Vadose Zone Soil	MLKALLSRVPFFRQRSSALSHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAESTKGSSPTR*
Ga0137399_103955122	3300012203	Vadose Zone Soil	MLKGLLSRVPFFRQRAPALSQRDDQLKADSAERRERWNEVMAEHQKPLGPQPAASTPSTGP*
Ga0137399_107027413	3300012203	Vadose Zone Soil	LLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPSTGP*
Ga0137399_111690682	3300012203	Vadose Zone Soil	MLKALLARVSFLRHRAVALSNRNDQLKTDADERRERWNQVIAEHQKPLDQQKGTSSPPK*
Ga0137376_100967593	3300012208	Vadose Zone Soil	MLKALLARVPFLRHRALTLPHRNDQLKADSAERRERWNQVIAEHQKPLEQQKGTSSSSG*
Ga0137376_108246592	3300012208	Vadose Zone Soil	MLKALLSRVSFLRRRTLTLSRNDQLPTDSAERRERWNQVIAEHQKPLDKDAAASAKAQTSAPPPN*
Ga0137386_103430571	3300012351	Vadose Zone Soil	MLKALLARVPFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPPK*
Ga0137360_100953794	3300012361	Vadose Zone Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTRS
Ga0137361_101835693	3300012362	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTPSTGDASGSAPKR*
Ga0134047_10607411	3300012380	Grasslands Soil	MRYQTKASTRSAMLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK*
Ga0134052_13218302	3300012393	Grasslands Soil	LAMLKALLSRVPFLRHHAPTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS*
Ga0134057_10063871	3300012396	Grasslands Soil	PSTRLAMLKALLSRVPFLRHHAPTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS*
Ga0134051_13540791	3300012398	Grasslands Soil	RGTRQHQTKASTRSAMLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK*
Ga0137358_101661862	3300012582	Vadose Zone Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTRSSGDASGSAPKR*
Ga0137358_106212701	3300012582	Vadose Zone Soil	MLKGLLSRVPFFRQRAPALSQRNDQLKADSAERRERWNEVMAEHQKPLGPQPAASTPSTGP*
Ga0137396_102398111	3300012918	Vadose Zone Soil	MLKALLARVSFLRHRAVALSNRNDQLKADADERRERWNQVIAEHQKPLDLQKGTSSPPK*
Ga0137396_102439521	3300012918	Vadose Zone Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPSTGDASGSAPKR*
Ga0137396_102588674	3300012918	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSQRTDQLKADSAERRERWNQVIADHQKPLGPQDATSRSSTGGASASAPK*
Ga0137396_104777542	3300012918	Vadose Zone Soil	MLKALLSRVPFFRQRPSALSHRDDQIKVDSAERRKGWNQVIAEHQKPLGPQKDKES*
Ga0137396_105529231	3300012918	Vadose Zone Soil	TRSAMLKALLSRVPFFRQRSSALSHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAESTKGSSPTR*
Ga0137394_103997902	3300012922	Vadose Zone Soil	MLKGLLSRVPFFRQRSSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPSTGP*
Ga0137359_103976961	3300012923	Vadose Zone Soil	MLKGLLSRVPFFRQRPSALSHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASTRSSGDASGSAPKR*
Ga0137416_107042343	3300012927	Vadose Zone Soil	MLKGLLSRVPFFRQRAPALSHRNDQHKADSAERRERWNEVIAEHQKPLVPQPAASTPSTGP*
Ga0137416_111864331	3300012927	Vadose Zone Soil	MLKGLLARVPFFRQRPSALAHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR*
Ga0137404_117241431	3300012929	Vadose Zone Soil	MLKALLSRVPFLRHHALTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPAT
Ga0137407_101834102	3300012930	Vadose Zone Soil	MLKALLSRVPFLRHHALTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS*
Ga0137410_118233371	3300012944	Vadose Zone Soil	MLKALLSPVPFFRQRASALSHRDDQLKADSAERRKGWNQVIAEHQKPLGPQKDKES*
Ga0134110_102266382	3300012975	Grasslands Soil	MLKALLSRVSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLYPPKDKSTR*
Ga0134076_100002976	3300012976	Grasslands Soil	MLKALLSRVPFLRHHAPTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKT*
Ga0134087_102886771	3300012977	Grasslands Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAPSTPPTGP*
Ga0134079_102192481	3300014166	Grasslands Soil	RVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTTPSTPSTGP*
Ga0134073_100104652	3300015356	Grasslands Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPSTPSTGP*
Ga0134072_104099582	3300015357	Grasslands Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPPIGA*
Ga0134112_102003912	3300017656	Grasslands Soil	MLKALLSRVPFLRHHAPPLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS
Ga0134083_100209332	3300017659	Grasslands Soil	MLKALLSRVPFLRHHAPTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS
Ga0066655_100507233	3300018431	Grasslands Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPRK
Ga0066667_107368031	3300018433	Grasslands Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPPTG
Ga0179594_100145953	3300020170	Vadose Zone Soil	MLKALLSRVPFLRHHALTLSRRKDQLKADSAERRERWNQVIAEHQKPLGKQPETSPPATEQTSASPPKS
Ga0179594_101112793	3300020170	Vadose Zone Soil	MLKGLLSRVPFFRQRPSALSHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPPTG
Ga0137417_14019712	3300024330	Vadose Zone Soil	MLKGLLSRVPFFRQRAPALSQRNDQLKADSAERRERWNEVMAEHQKPLGPQPAASTPSTG
Ga0207665_110860892	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLKELLSRVSSLRDRALSLSHRKDQLKTDSAERRDRWNQVIAEHQKPLDKQAGTSAPPK
Ga0209235_12087311	3300026296	Grasslands Soil	MLKALLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPPK
Ga0209236_11290823	3300026298	Grasslands Soil	MLKALLARVSFLRHRALSLSNRNDQLKADSDERRERWNRVIAEHQKPLDQPKGTSAPPK
Ga0209236_12906202	3300026298	Grasslands Soil	MLKGLLARVSFLRHRALALSNRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPPK
Ga0209761_10268913	3300026313	Grasslands Soil	MLKALLARVSFLRHRALSLSNRNDQLKADSDERRERWNRVIAEHQKPLDQPKGTSGPPK
Ga0209471_10350742	3300026318	Soil	MLKGLLARVPFFRQRPSALPHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR
Ga0209471_10399382	3300026318	Soil	MLKGLLSRVPFFRQRTPALSHRNDQLKADSAERRERWDEVIAEHQKPLGPQPAASKPSTPSTGP
Ga0209472_10426273	3300026323	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTP
Ga0209470_10020072	3300026324	Soil	MLKALLARVSFLRHRALALSDRNDQLKADSDERRERWNQVIAEHQKPLDQQKGTSAPPK
Ga0209152_102304921	3300026325	Soil	VSFLRQRALALAHRTDQLKADSAERRERWNQVIAEHQKPLDPPKDKSTR
Ga0209057_10136342	3300026342	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASPPPTG
Ga0209059_10408503	3300026527	Soil	MLKALLARVPFFRQRALTLSSRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDAPGSAPKR
Ga0209806_10068054	3300026529	Soil	MLKALLARVPFFRQRALTLSSRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDASGSAPKR
Ga0209807_10234723	3300026530	Soil	MLKGLLSRVPFFRQRPSALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTTPSTPSTGP
Ga0209648_103305201	3300026551	Grasslands Soil	MLKALLSRVPFFRQRPSSLSHRDDQLKADSAERRERWNAVIAEHQKPLGPQSAESTKDSPPTR
Ga0209577_100444111	3300026552	Soil	LARVPFFRQRPSALPHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAASARSTGDAPGSAPKR
Ga0179587_104390962	3300026557	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTPSTGDASGSAPTR
Ga0209843_10402132	3300027511	Groundwater Sand	MIQALFSRVSFFRQRAVALFHRTDQLKADSAERRERWNHVIAEHQKPLDQKRGTSTSSTREA
Ga0209388_10301374	3300027655	Vadose Zone Soil	MLKALLSRVSFFRQRALTLSHGNDQLKADAAERRDRWNEVIAEHQKPLGPQPAASTRSTGDASGSAPKR
Ga0209814_100041022	3300027873	Populus Rhizosphere	MLKALLARVSSLRHRALTLSHRNDQRKADSAERTERWNQVIAAAQKPADPQKGTSTSSK
Ga0209814_100450622	3300027873	Populus Rhizosphere	MLKALLFRVPFLRQRAVMLAQRNEQLKAESEERRARWNQVIADHQKPLEKQTSTSSPPK
Ga0209814_101335321	3300027873	Populus Rhizosphere	MLKALLSRVSFLRQRAVMLAQRNEQMKAESDERRARWNQVIADQQKPLEKQTSTSSPPK
Ga0209814_102965761	3300027873	Populus Rhizosphere	MLKALLSRVPFLRRRAATHRNDQLKSDSDERRVRWNQVIAEHQNPMVPHKVT
Ga0209382_1001085814	3300027909	Populus Rhizosphere	MLKALLSRVPFLRRRAATHRNDQLKSDSDERRARWNQVIAEHQNPMVPHKVTAAATETVTGSPPE
Ga0209382_120340142	3300027909	Populus Rhizosphere	RVSFLRQRAMMLAHRNNQPKADAEERRERWNQVIAEHQKPLEKQTGTSSSPK
Ga0137415_100430645	3300028536	Vadose Zone Soil	MLKGLLSRVPFFRQRAPALSHRNDQLKADSAERRERWNEVIAEHQKPLGPQPAASTPSTG
Ga0137415_105673692	3300028536	Vadose Zone Soil	MLKALLARVSFLRHRAVALSNRNDQLKADADERRERWNQVIAEHQKPLDQQKGTSSPPK
Ga0307278_102050022	3300028878	Soil	RCPTGSAMIQAMFSRVSSIRQRAVALFHRNDQLKADSAERRERWNQVIAEHQKPLDQQKSTSASSTRGA
Ga0299906_1000283812	3300030606	Soil	MLQAICSPVSFVRQRVSALLHRNDRLKADAAERRERWNHVIAEHQKPLDQPAPNTKAP
Ga0307408_1023178601	3300031548	Rhizosphere	MTGLFSYVSSLRQRARALLHRNDQLKVDSAERRDRWNEVIAEHQKPLDPQKSPGKINLPG
Ga0307469_110571511	3300031720	Hardwood Forest Soil	SSSVSMRSAMLKGLLSRVPFFRQRAPALSHRHDQLKADSAERRERWNEVIAEHQKPLGPQPAESTRSSGDASGAAPQR
Ga0307473_105666252	3300031820	Hardwood Forest Soil	MIKALLSRVPFFRQRSPALSQRDDQLKADSAERRERWNEVIAEHQKPLGPQPAESTKGSSPTR
Ga0307471_1028726811	3300032180	Hardwood Forest Soil	MIKALLSRVPFFRQRSPALSHRDDQLKADSAERRERWNEVIAEHQKPLGPQPAESTKGSSPTR
Ga0214472_108817862	3300033407	Soil	MLQALCSPVSFVRQRVSALLHRNDRLKADAAERRERWNHVIAEHQKPLDQPAPDTKAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences